MD01G1061600.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
16540925 .. 16544247
3323 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1061600.v1.1.491

Sequence Viewer

Length: 2811 bp
ATGCAGGGCGAGGGTATTAGGTGCTTGAAACTATTTCATGTTTCAATATTTGTGGTGCTAATTTTGCTACAATATTGCAACCTTTCCCTATCCCTTGAATTCAATAATATTTCTTCAGGAGTAGTAGGCCACAAGCATATTGCTAAGGTGCTGAAGGTGATCAGGTGCATAGAGAGGGAAAGGGAAGCTCTGCTTGCAATCAAACAAGACCTCGTGGATGACTACAATAGCCTCTCTTCGTGGGGCAGCGAAGCCCAAAAACAAGATTGTTGTGCATCATGGGTAGGAGTCTACTGTGACGAATATACGGGACACGTTGTCAAACTTGATCTTAGTGGAGGATACTTTCTTGGTGGTCGAATATCAAGTCAGGTTGGAAACCTTACCCACTTGCAATATTTTGATTTCAATGGGAATGACTTTAACAATGTAGAAAATCTGAATTCCTGGCTCCCTCGTCTTTCTTCTTTAACATATTTAGACTTGAGTTACAACAATCTCAGTAATGTTCCTGACTGGCTGGAAATAGTTAGTAAGCTTCCTAAACTTACAAACTTGACATTAATAGGGTGTGGTCTTTCTTCTCCTGCAATTCATTCCAGTACTCTTTTTAACATAAATTCTTCTAAATCTCTTGCTCATGTTGATCTCAGTTTCAACCAGCTCACATCTTCTTCAATATTTGTATGGTTGTCCAACTTCAGTACTAGCCTTGTTCAACTTGGCCTCTCTCGCAATAACTTCACGGGTTCACTTCCTGATGTTTTTGGAAACATGAGCTCTCTTGCCTATCTTGATCTCTCTTATAACCAAATTGAAGGAGGGATTCCACAATCTTTTTCAGAGTTATGTAGTTTGCAAGCATTGCTCTTTCGCAACAACATTTTGAGTATACAACTTTCCAAGCTGGTTCAAACATTAATGTCTACATGCCCTGATAAGAACTCATTAGAGACTCTAAGCCTCTCAAACAATTCTCTTTCTGAATCAATTCCTAATCTCAAAAACTTTTCGTCATTGAAAAAATTAGACCTCTATGACAATCAATTGAGTGGAACAATACCTGAAAACATTGGCCATATGTCTTCGCTCGAGACTATCCGCCTTGGCATGAATGCTTTGGAAGGTGTGGTTTCAGAAAGCCACTTCTCCAATCTCTCCAGATTAATAATTTTGGATTTGTCCTCTACCCCACTAGCTTTAGACTTCAATTCTAATTGGGTTCCTCCTTTCCAATTGGTTTCCATATATTTGGGGTTTTGCAAGATGGGTCCACATTTTCCAAAATGGCTTAAGACTCAGAAAAATTATTTGGACCTTGATATTTCTAATGCAGGCATTTCTGATATCCTTCCCAGTTGGTTTTGGGGCATACTGTCTCATGATCATGAAATTGATTATATAGATCTCTCCAACAACCGAATTAGAGGAATAATTCCAAATTCAAGATTTGAGTTTACATCATCTTCCCCTCCTGATGTGAATTTGAGTTGGAACCAATTGGAAGGTTCAATACCTTCATTCCTTTCCAAAGCATCATCTCTTGACCTCTCCAACAATAAGCTTTCAGGGCCAATTTCTTTCTTGTGTCCAAAGACTCCAAACGAGGTTAGTTCATTATACTTTCTTGATCTCTCAAGCAACAATTTATATGAAAAACTTCCTAATTGTTGGACACATTTTGAAAATCTAGCCATTCTAGATTTGAGTGACAATTCCATTTTAGGGAAAATTCCTACCACAATGGGCTCTTTATCTTCTATTCAAACACTGAAACTAAATAACAATAGGTTTGTTGGGGGATTGCCTTCATCCTTGAACAACTGTACAAGTCTCATAGTTTTTGAAGTTGGGGAAAATAAATTATCAGGTTTGATACCTGAATGGTTAGGGGTTGGACTTCCAAATCTGGCTATCCTTATCCTCCGTTCTAATCACTTCTATGGAAGCATTCCATCACAATTGTGTAATATGAGAGGCATTCAAATTCTAGATTTCTCAATGAATAACATCTCGGGAAGTTTACCCAAATGCCTCAACAATTTGACTAATTTGGCTCAAAAAGGAAGTTCAAGTCTAACTCTCACTCATACCTATAATGTAACCTTGATTGGCAAGTGGGAGTATTATGAAGACGAATCATCCTTGATATGGAAAGGCATAATGTCCAAATACAAAAGTACTTTGGGGCTTGTAAAGAGTATTCATCTGTCGAGCAACCGATTAACAGGGGAGATTCCTAGTGAAATCACTGATCTTGTGGGGTTGGTTTCCTTAAACCTATCAAGAAACAACTTAACAGGTCAAATAACTCCAAAGATCGGGAAGTTGCAGTCTTTAGATTTGCTTGATTTGTCAAACAACCAAATACATGGTACAATTCCAACAAGTCTCTTTGGAATATCTGGCCTTGGTAAGTTGGACTTGTCCAACAACAACCTGTCTGGAAAAATTCCCATGGGGTCTCAGCTTCAAACCTATGAGCCTTCTGTTTTTTCCGGAAATCCTCTCCTTTGTGGAATTCCACTTGAACAAATGTGCTCTCCTGAGGAAACAACTCCAGTGGAGCAACCGGTGGTTGAGAATCAAGATGAAGATAATGATGAATTTATAACACTGGGATTTTACGTGAGTTTGGGGCTTGGATTTGTCGTTGGATTTTGGGGATTTTGTGGGAGTTTGATATTCATCAGGTCATGGAGATACACATACTACAAGTTCTTGAACTGTGTATACGATTGGCTTTATGTAAGAGTGGCTTTGATCGGGCGACGAAGAATGATTGATGTCTCGTGCATCTACCGTTCGTAA

Protein Analysis

937

Amino Acids

103.88

Weight (kDa)

5.58

Isoelectric Point (pI)

36.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 59 - 100 4.5e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 237 - 294 1.7e-09 Leucine rich repeat
LRR_14 PF23598 255 - 433 3.7e-08 Leucine-rich repeat region
LRR_4 PF12799 316 - 352 5.2e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 339 - 399 6.3e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 807, 2612
AccI GTMKAC 4 cut(s) 291, 892, 926, 2733
AccIII TCCGGA 1 cut(s) 2498
AciI CCGC 1 cut(s) 1102
AcoI YGGCCR 1 cut(s) 1075
AcuI CTGAAG 3 cut(s) 99, 173, 685
AfaI GTAC 5 cut(s) 604, 706, 1828, 2182, 2377
AfiI CCNNNNNNNGG 3 cut(s) 1725, 2151, 2321
AflII CTTAAG 1 cut(s) 1292
AflIII ACRYGT 1 cut(s) 313
AgeI ACCGGT 1 cut(s) 2572
AhdI GACNNNNNGTC 1 cut(s) 317
AjnI CCWGG 1 cut(s) 446
AjuI GAANNNNNNNTTGG 2 cut(s) 1295, 1327
AleI CACNNNNGTG 1 cut(s) 1963
AluBI AGCT 8 cut(s) 188, 538, 664, 780, 907, 1199, 1564, 2470
AluI AGCT 8 cut(s) 188, 538, 664, 780, 907, 1199, 1564, 2470
Alw21I GWGCWC 2 cut(s) 782, 2543
Alw26I GTCTC 7 cut(s) 947, 1088, 1383, 1838, 2396, 2469, 2794
Ama87I CYCGRG 2 cut(s) 1091, 2014
Aor13HI TCCGGA 1 cut(s) 2498
AoxI GGCC 5 cut(s) 127, 724, 1075, 1571, 2407
ApeKI GCWGC 1 cut(s) 246
ArsI GACNNNNNNTTYG 2 cut(s) 352, 384
AseI ATTAAT 3 cut(s) 563, 920, 1166
AsiGI ACCGGT 1 cut(s) 2572
Asp700I GAANNNNTTC 2 cut(s) 990, 1659
AspS9I GGNCC 3 cut(s) 1271, 1315, 1571
AsuHPI GGTGA 1 cut(s) 169
AvaI CYCGRG 2 cut(s) 1091, 2014
AvaII GGWCC 2 cut(s) 1271, 1315
AxyI CCTNAGG 1 cut(s) 2547
BalI TGGCCA 1 cut(s) 1077
BanII GRGCYC 2 cut(s) 782, 1751
BarI GAAGNNNNNNTAC 2 cut(s) 1497, 1529
BauI CACGAG 2 cut(s) 212, 2791
BbsI GAAGAC 2 cut(s) 1077, 2139
Bbv12I GWGCWC 2 cut(s) 782, 2543
BbvI GCAGC 1 cut(s) 258
BccI CCATC 2 cut(s) 1261, 1963
BciT130I CCWGG 1 cut(s) 448
BciVI GTATCC 1 cut(s) 335
BclI TGATCA 2 cut(s) 159, 1384
BcoDI GTCTC 7 cut(s) 947, 1088, 1383, 1838, 2396, 2469, 2794
BfaI CTAG 6 cut(s) 708, 1196, 1691, 1700, 1991, 2241
BfrI CTTAAG 1 cut(s) 1292
BfuI GTATCC 1 cut(s) 335
BglII AGATCT 1 cut(s) 1405
BisI GCNGC 1 cut(s) 247
BlsI GCNGC 1 cut(s) 248
BmcAI AGTACT 3 cut(s) 604, 706, 2182
Bme1390I CCNGG 1 cut(s) 448
Bme18I GGWCC 2 cut(s) 1271, 1315
BmeRI GACNNNNNGTC 1 cut(s) 317
BmeT110I CYCGRG 2 cut(s) 1091, 2014
BmgT120I GGNCC 3 cut(s) 1271, 1315, 1571
BmiI GGNNCC 4 cut(s) 452, 1224, 1272, 1496
BmrFI CCNGG 1 cut(s) 448
BmrI ACTGGG 2 cut(s) 1350, 2627
BmsI GCATC 3 cut(s) 284, 1544, 2805
BmuI ACTGGG 2 cut(s) 1350, 2627
BpiI GAAGAC 2 cut(s) 1077, 2139
BpmI CTGGAG 2 cut(s) 1144, 2544
Bpu10I CCTNAGC 1 cut(s) 144
BpuEI CTTGAG 2 cut(s) 505, 1621
BsaAI YACGTR 1 cut(s) 2629
BsaBI GATNNNNATC 1 cut(s) 2687
BsaI GGTCTC 1 cut(s) 2469
BsaJI CCNNGG 3 cut(s) 1105, 2410, 2457
BsaWI WCCGGW 2 cut(s) 2498, 2572
Bsc4I CCNNNNNNNGG 3 cut(s) 1725, 2151, 2321
Bse118I RCCGGY 1 cut(s) 2572
Bse1I ACTGG 5 cut(s) 521, 600, 1356, 2561, 2622
Bse21I CCTNAGG 1 cut(s) 2547
Bse3DI GCAATG 1 cut(s) 863
Bse8I GATNNNNATC 1 cut(s) 2687
BseAI TCCGGA 1 cut(s) 2498
BseBI CCWGG 1 cut(s) 448
BseDI CCNNGG 3 cut(s) 1105, 2410, 2457
BseGI GGATG 3 cut(s) 223, 1811, 2141
BseJI GATNNNNATC 1 cut(s) 2687
BseLI CCNNNNNNNGG 3 cut(s) 1725, 2151, 2321
BseMI GCAATG 1 cut(s) 863
BseMII CTCAG 5 cut(s) 514, 664, 1313, 2480, 2538
BseNI ACTGG 5 cut(s) 521, 600, 1356, 2561, 2622
BseXI GCAGC 1 cut(s) 258
BshFI GGCC 5 cut(s) 129, 726, 1077, 1573, 2409
BshTI ACCGGT 1 cut(s) 2572
BsiHKAI GWGCWC 2 cut(s) 782, 2543
BsiHKCI CYCGRG 2 cut(s) 1091, 2014
BsiSI CCGG 2 cut(s) 2499, 2573
BslFI GGGAC 1 cut(s) 324
BslI CCNNNNNNNGG 3 cut(s) 1725, 2151, 2321
BsmAI GTCTC 7 cut(s) 947, 1088, 1383, 1838, 2396, 2469, 2794
BsmFI GGGAC 1 cut(s) 324
BsmI GAATGC 3 cut(s) 1120, 1950, 1980
BsnI GGCC 5 cut(s) 129, 726, 1077, 1573, 2409
Bso31I GGTCTC 1 cut(s) 2469
BsoBI CYCGRG 2 cut(s) 1091, 2014
Bsp1286I GDGCHC 3 cut(s) 782, 1751, 2543
Bsp13I TCCGGA 1 cut(s) 2498
Bsp1407I TGTACA 1 cut(s) 1826
Bsp19I CCATGG 1 cut(s) 2457
BspACI CCGC 1 cut(s) 1102
BspANI GGCC 5 cut(s) 129, 726, 1077, 1573, 2409
BspCNI CTCAG 5 cut(s) 513, 663, 1312, 2479, 2539
BspEI TCCGGA 1 cut(s) 2498
BspHI TCATGA 2 cut(s) 1381, 1387
BspLI GGNNCC 4 cut(s) 452, 1224, 1272, 1496
BspTI CTTAAG 1 cut(s) 1292
BspTNI GGTCTC 1 cut(s) 2469
BsrDI GCAATG 1 cut(s) 863
BsrFI RCCGGY 1 cut(s) 2572
BsrGI TGTACA 1 cut(s) 1826
BsrI ACTGG 5 cut(s) 521, 600, 1356, 2561, 2622
BssAI RCCGGY 1 cut(s) 2572
BssECI CCNNGG 3 cut(s) 1105, 2410, 2457
BssNAI GTATAC 2 cut(s) 893, 2734
BssSI CACGAG 2 cut(s) 212, 2791
BssT1I CCWWGG 3 cut(s) 1105, 2410, 2457
Bst1107I GTATAC 2 cut(s) 893, 2734
Bst2BI CACGAG 2 cut(s) 212, 2791
Bst2UI CCWGG 1 cut(s) 448
Bst4CI ACNGT 5 cut(s) 296, 1377, 1826, 2729, 2804
Bst6I CTCTTC 1 cut(s) 241
BstAFI CTTAAG 1 cut(s) 1292
BstAPI GCANNNNNTGC 1 cut(s) 865
BstAUI TGTACA 1 cut(s) 1826
BstBAI YACGTR 1 cut(s) 2629
BstC8I GCNNGC 3 cut(s) 195, 861, 1336
BstDEI CTNAG 8 cut(s) 144, 332, 500, 650, 959, 1299, 2466, 2547
BstDSI CCRYGG 1 cut(s) 2457
BstF5I GGATG 3 cut(s) 223, 1811, 2141
BstMAI GTCTC 7 cut(s) 947, 1088, 1383, 1838, 2396, 2469, 2794
BstMWI GCNNNNNNNGC 5 cut(s) 64, 194, 732, 865, 1570
BstNI CCWGG 1 cut(s) 448
BstNSI RCATGY 1 cut(s) 933
BstSCI CCNGG 1 cut(s) 446
BstV1I GCAGC 1 cut(s) 258
BstV2I GAAGAC 2 cut(s) 1077, 2139
BstX2I RGATCY 1 cut(s) 1405
BstXI CCANNNNNNTGG 2 cut(s) 1252, 2372
BstYI RGATCY 1 cut(s) 1405
BstZ17I GTATAC 2 cut(s) 893, 2734
Bsu36I CCTNAGG 1 cut(s) 2547
BsuI GTATCC 1 cut(s) 335
BsuRI GGCC 5 cut(s) 129, 726, 1077, 1573, 2409
BtgI CCRYGG 1 cut(s) 2457
BtsCI GGATG 3 cut(s) 223, 1811, 2141
BtsIMutI CAGTG 4 cut(s) 1769, 2250, 2568, 2615
Cac8I GCNNGC 3 cut(s) 195, 861, 1336
CciI TCATGA 2 cut(s) 1381, 1387
Cfr10I RCCGGY 1 cut(s) 2572
Cfr13I GGNCC 3 cut(s) 1271, 1315, 1571
Csp6I GTAC 5 cut(s) 603, 705, 1827, 2181, 2376
CspAI ACCGGT 1 cut(s) 2572
CspCI CAANNNNNGTGG 4 cut(s) 33, 68, 2544, 2579
CviQI GTAC 5 cut(s) 603, 705, 1827, 2181, 2376
DdeI CTNAG 8 cut(s) 144, 332, 500, 650, 959, 1299, 2466, 2547
DriI GACNNNNNGTC 1 cut(s) 317
EaeI YGGCCR 1 cut(s) 1075
Eam1104I CTCTTC 1 cut(s) 241
Eam1105I GACNNNNNGTC 1 cut(s) 317
EarI CTCTTC 1 cut(s) 241
EciI GGCGGA 1 cut(s) 1091
Ecl136II GAGCTC 1 cut(s) 780
Eco130I CCWWGG 3 cut(s) 1105, 2410, 2457
Eco24I GRGCYC 2 cut(s) 782, 1751
Eco31I GGTCTC 1 cut(s) 2469
Eco32I GATATC 1 cut(s) 1348
Eco47I GGWCC 2 cut(s) 1271, 1315
Eco53kI GAGCTC 1 cut(s) 780
Eco57I CTGAAG 3 cut(s) 99, 173, 685
Eco81I CCTNAGG 1 cut(s) 2547
Eco88I CYCGRG 2 cut(s) 1091, 2014
EcoICRI GAGCTC 1 cut(s) 780
EcoRI GAATTC 3 cut(s) 98, 442, 2520
EcoRII CCWGG 1 cut(s) 446
EcoRV GATATC 1 cut(s) 1348
EcoT14I CCWWGG 3 cut(s) 1105, 2410, 2457
EcoT38I GRGCYC 2 cut(s) 782, 1751
ErhI CCWWGG 3 cut(s) 1105, 2410, 2457
FalI AAGNNNNNCTT 6 cut(s) 177, 209, 2408, 2440, 2743, 2775
FaqI GGGAC 1 cut(s) 324
FauNDI CATATG 1 cut(s) 1080
FbaI TGATCA 2 cut(s) 159, 1384
FblI GTMKAC 4 cut(s) 291, 892, 926, 2733
Fnu4HI GCNGC 1 cut(s) 247
FokI GGATG 3 cut(s) 230, 1798, 2128
FriOI GRGCYC 2 cut(s) 782, 1751
Fsp4HI GCNGC 1 cut(s) 247
FspBI CTAG 6 cut(s) 708, 1196, 1691, 1700, 1991, 2241
GluI GCNGC 1 cut(s) 247
GsuI CTGGAG 2 cut(s) 1144, 2544
HaeIII GGCC 5 cut(s) 129, 726, 1077, 1573, 2409
HapII CCGG 2 cut(s) 2499, 2573
HindIII AAGCTT 2 cut(s) 536, 1562
HinfI GANTC 9 cut(s) 288, 826, 955, 986, 1297, 1597, 2138, 2236, 2584
HpaII CCGG 2 cut(s) 2499, 2573
HphI GGTGA 1 cut(s) 169
Hpy166II GTNNAC 8 cut(s) 292, 752, 893, 927, 1274, 1458, 2024, 2734
Hpy188I TCNGA 6 cut(s) 441, 844, 985, 1138, 1302, 1345
Hpy8I GTNNAC 8 cut(s) 292, 752, 893, 927, 1274, 1458, 2024, 2734
Hpy99I CGWCG 1 cut(s) 2775
HpyAV CCTTC 8 cut(s) 148, 812, 1118, 1361, 1499, 1527, 1818, 2496
HpyCH4III ACNGT 5 cut(s) 296, 1377, 1826, 2729, 2804
HpyCH4IV ACGT 2 cut(s) 315, 2628
HpyF10VI GCNNNNNNNGC 5 cut(s) 64, 194, 732, 865, 1570
HpyF3I CTNAG 8 cut(s) 144, 332, 500, 650, 959, 1299, 2466, 2547
HpySE526I ACGT 2 cut(s) 315, 2628
Kpn2I TCCGGA 1 cut(s) 2498
Ksp22I TGATCA 2 cut(s) 159, 1384
LmnI GCTCC 2 cut(s) 456, 2566
Lsp1109I GCAGC 1 cut(s) 258
LweI GCATC 3 cut(s) 284, 1544, 2805
MaeI CTAG 6 cut(s) 708, 1196, 1691, 1700, 1991, 2241
MaeII ACGT 2 cut(s) 315, 2628
MaeIII GTNAC 4 cut(s) 296, 488, 1709, 2101
MfeI CAATTG 4 cut(s) 1046, 1235, 1499, 1961
MflI RGATCY 1 cut(s) 1405
MhlI GDGCHC 3 cut(s) 782, 1751, 2543
MlsI TGGCCA 1 cut(s) 1077
MluNI TGGCCA 1 cut(s) 1077
MlyI GAGTC 4 cut(s) 297, 949, 1291, 1591
Mox20I TGGCCA 1 cut(s) 1077
MroI TCCGGA 1 cut(s) 2498
MroXI GAANNNNTTC 2 cut(s) 990, 1659
MscI TGGCCA 1 cut(s) 1077
MslI CAYNNNNRTG 3 cut(s) 1386, 1941, 1963
Msp20I TGGCCA 1 cut(s) 1077
MspCI CTTAAG 1 cut(s) 1292
MspI CCGG 2 cut(s) 2499, 2573
MspR9I CCNGG 1 cut(s) 448
MunI CAATTG 4 cut(s) 1046, 1235, 1499, 1961
Mva1269I GAATGC 3 cut(s) 1120, 1950, 1980
MvaI CCWGG 1 cut(s) 448
MwoI GCNNNNNNNGC 5 cut(s) 64, 194, 732, 865, 1570
NcoI CCATGG 1 cut(s) 2457
NdeI CATATG 1 cut(s) 1080
NlaIV GGNNCC 4 cut(s) 452, 1224, 1272, 1496
NmuCI GTSAC 2 cut(s) 296, 1709
NspI RCATGY 1 cut(s) 933
OliI CACNNNNGTG 1 cut(s) 1963
PaeR7I CTCGAG 1 cut(s) 1091
PagI TCATGA 2 cut(s) 1381, 1387
PctI GAATGC 3 cut(s) 1120, 1950, 1980
PdmI GAANNNNTTC 2 cut(s) 990, 1659
PfeI GAWTC 5 cut(s) 826, 986, 2138, 2236, 2584
PinAI ACCGGT 1 cut(s) 2572
PkrI GCNGC 1 cut(s) 248
PleI GAGTC 4 cut(s) 296, 949, 1291, 1591
PpsI GAGTC 4 cut(s) 296, 949, 1291, 1591
Ppu21I YACGTR 1 cut(s) 2629
PshBI ATTAAT 3 cut(s) 563, 920, 1166
PsiI TTATAA 2 cut(s) 807, 2612
Psp124BI GAGCTC 1 cut(s) 782
Psp6I CCWGG 1 cut(s) 446
PspGI CCWGG 1 cut(s) 446
PspN4I GGNNCC 4 cut(s) 452, 1224, 1272, 1496
PspPI GGNCC 3 cut(s) 1271, 1315, 1571
PsrI GAACNNNNNNTAC 2 cut(s) 2717, 2749
PsuI RGATCY 1 cut(s) 1405
RsaI GTAC 5 cut(s) 604, 706, 1828, 2182, 2377
RsaNI GTAC 5 cut(s) 603, 705, 1827, 2181, 2376
RseI CAYNNNNRTG 3 cut(s) 1386, 1941, 1963
SacI GAGCTC 1 cut(s) 782
SatI GCNGC 1 cut(s) 247
Sau96I GGNCC 3 cut(s) 1271, 1315, 1571
ScaI AGTACT 3 cut(s) 604, 706, 2182
SchI GAGTC 4 cut(s) 297, 949, 1291, 1591
ScrFI CCNGG 1 cut(s) 448
SduI GDGCHC 3 cut(s) 782, 1751, 2543
SfaNI GCATC 3 cut(s) 284, 1544, 2805
Sfr274I CTCGAG 1 cut(s) 1091
SinI GGWCC 2 cut(s) 1271, 1315
SlaI CTCGAG 1 cut(s) 1091
SmiMI CAYNNNNRTG 3 cut(s) 1386, 1941, 1963
SmlI CTYRAG 4 cut(s) 484, 1091, 1292, 1636
SmoI CTYRAG 4 cut(s) 484, 1091, 1292, 1636
SsiI CCGC 1 cut(s) 1102
SspI AATATT 5 cut(s) 48, 74, 109, 398, 681
SspMI CTAG 6 cut(s) 708, 1196, 1691, 1700, 1991, 2241
SstI GAGCTC 1 cut(s) 782
StyD4I CCNGG 1 cut(s) 446
StyI CCWWGG 3 cut(s) 1105, 2410, 2457
TaaI ACNGT 5 cut(s) 296, 1377, 1826, 2729, 2804
TaiI ACGT 2 cut(s) 318, 2631
TaqI TCGA 3 cut(s) 358, 1092, 2213
TatI WGTACW 4 cut(s) 602, 704, 1826, 2180
TfiI GAWTC 5 cut(s) 826, 986, 2138, 2236, 2584
TscAI CASTG 4 cut(s) 1776, 2257, 2568, 2622
TseFI GTSAC 2 cut(s) 296, 1709
TseI GCWGC 1 cut(s) 246
Tsp45I GTSAC 2 cut(s) 296, 1709
TspGWI ACGGA 1 cut(s) 1916
TspRI CASTG 4 cut(s) 1776, 2257, 2568, 2622
Vha464I CTTAAG 1 cut(s) 1292
VpaK11BI GGWCC 2 cut(s) 1271, 1315
VspI ATTAAT 3 cut(s) 563, 920, 1166
XbaI TCTAGA 2 cut(s) 1699, 1990
XceI RCATGY 1 cut(s) 933
XhoI CTCGAG 1 cut(s) 1091
XmiI GTMKAC 4 cut(s) 291, 892, 926, 2733
XmnI GAANNNNTTC 2 cut(s) 990, 1659
XspI CTAG 6 cut(s) 708, 1196, 1691, 1700, 1991, 2241
ZrmI AGTACT 3 cut(s) 604, 706, 2182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.