Rw7G019990

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
22338246 .. 22341086
2841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019990.1

Sequence Viewer

Length: 2841 bp
ATGTTTTTCACCATAATGAGTGGTAGGTCTATGCATTATGTTTTGGTTGGGCTTGTGTGCCTGGCCGTTGCCTCTACTATTTATTGTTCAAGTGTTGGAAGCTCCAACAACAGTATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGACTCCAATGCTCTTGCTTCTTGGGAAAACAAAAAAGATTGCTGCAAGTGGAGAGGAATAGCGTGCCACAACCAAACAGGTCATGTCACCAGTCTTGATTTATTCTTTATTAGTTATGATCCATATTTCAATTCTACTGAAGTTCCTTTAAGAGGTGAAATTAGTCCTTCACTACTTGAATTGCGATATCTAAATTACTTGGACCTCAGTTATAATGATTTCGGAGGAATGATCATTCCTAAGTTCATTGGCTCTCTGAGTCAACTGAAAGAACTCAAACTTGCACAAGCTAATTTCAGTGGAACCGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCATACGCTTGATCTTTCCAACAACTATGATCTTTCCAACAACTATGATCTTATCTGGAACTATGATGTTCGTTCAGAAAATCTTGAGTGGTTATCTCATCTTTCTTCTTTGAGATACCTGAACATGTCAGGTGTAGATTTGTCAAAGGTTGTGAATTGGCCACCATCTTTAAGCAAGCTCACCTTACTGACAGAGCTTCAGTTATCCCAGTGTAACCTTCCTGATGTCAATCTAAGAACACCTTCCTTTATTAATTCTTCCACCTCTCTTCAACTCCTTAACCTCTCTCATAACTCTCTTAATTCTTCAATATTTTATTGGATAGCCAATGTCAGCAGCAACTTTGTCCACATTGATCTCTCTTCCAACAATCTTGAAGGTCCCATCTCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTAGATCTCTCTGCCAATCAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCATTAGGATTAGCTAAAAACCAATTGTCTGAAAACATTGAGGACTCTGTTAAAGCCTTGTCTTGTGCTGAGAACACACTTGAGGCCTTGGACTTGTATCATAACCTGTTTTGGGGGTCATGGCCAGATTTCAAACGATTTTCAAAGTTAAGAGTGTTATATCTTGGCTGGAATGAAATAAATGGGTCTCTACCCGAGAGTGTTGGGCAACTCTCTAGCCTTGAAGAACTATCTCTCACCTATAATTCTTTCACTGGTGTCCTAACAGAATCACATTTTCTGAACCTCTCTCGTTTACAGAGTTTGTATATTTCTTTTAATCGTTTCTCTATCAATCTGAGCTCTAATTGGAATCCACCATTTCAACTTACTGGTTGGTTAGGCATGTCCTCCTGCAAGCTGGGCCCAGCTTTTCCCAAATGGATTCTAACGCAAACAAATCTTACCGGTCTTTATCTCCGTAATGCTGGACTATCAGGATCATTACCTAACAAGTTTTGGGATCTATTTTCTGGCTTATCTGAATTAGGTCTCTCTAGGAACAAAATTCATGGAAAACTGCCGAATCTGTCAACAACAAGCTTGAGTTTTCTCGACTTGTCTTCTAATCTACTTTCTGGTGCTGTGCCATCATTTTCTCCTATGCTCAGGCAGTTGTATCTCTGGAATAACACGTTTTCTGAGCCGCTGTCTTCCTTCTGTGCAACGCAGGCTCCAAATTTGCATCTGATTGACATTTCTGAGAACCAACTGTCAGGAGAGCTTCCTAATTGTTGGATGCTATTCCGAGGATTGGAAGCATTGTTATTGGAAAACAATAAATTATCTGGAAAAATACCAAGCTCTTTAGGCAATCTAAAAAGACTTGCATTATTGCATTTAAATGCTAACAACTTTTCAGGAGATTTGCCTTCTTTAGAGAACTGTACCAAATTATTGATGGTTGACCTTGGCGACAATAACCTGTCGGGAAAGATACCAACATGGATAGGCAAAAGCCTAACAAACTTGGTGATTCTACGGTTACGGTCCAATGAGTTCAATGGAATCATACCCTTCTCCCTGTGCAGTCTAGCCACCATTCATGTTTTGGACCTCTCTCACAACAATATTACAGGAGCATTACCAGATTGCTTCAATAACATAACAGCTTTGGCTGATGATTTCGTTGCTTTTGCTTTTATGGCTGTAGAACTCGTGTGGAAAGGAATAGAGATTAAGTTTGCAAACAATCTTTGGCATTTGAGAAGCATTGACATTTCAAGCAATTCTTTTGTTGGGGAAATTCCGGAAAGCATCACGAGTATGCAAAAGTTGATTTCTCTCAACCTCTCAAGAAACAAATTTACAGGAAAACTTCCTGAAAACTTCGGTAACATGAAGAAGTTAGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTCTAATTCCTTCCAGTTTTACGAGTTTGAATTTTCTTGGAGTCTTGGACTTGTCATACAACCAATTGTCTGGAAGAATTCCAGTAAGCACCCAACTTCAGAGTTTCGATGCTTCTAAATATATGGGAAATCTTGGACTCTGCGGACCACCACTCTCACCAAATTGCCCCGGAGATGGAATCGCGAGAGGAAATGAAATTGATAACAAAGAACAGGTTAATGATGGTCTCAACCTTGGATTCTTTATTAGTGCAGTGCTGGGATTTGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATCTATGCCAAAACTGCTGTGTACAAGGCAAAAGTGCGGAGGACACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

946

Amino Acids

105.16

Weight (kDa)

6.09

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 79 3.3e-12 Leucine rich repeat N-terminal domain
LRR_8 PF13855 287 - 343 3.4e-07 Leucine rich repeat
LRR_8 PF13855 383 - 443 2.8e-06 Leucine rich repeat
LRR_14 PF23598 738 - 827 7.4e-07 Leucine-rich repeat region
LRR_8 PF13855 748 - 807 2.4e-10 Leucine rich repeat
LRR_8 PF13855 788 - 831 1e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 384
AccII CGCG 1 cut(s) 2609
AccIII TCCGGA 1 cut(s) 2290
AciI CCGC 4 cut(s) 1688, 2568, 2715, 2821
AclWI GGATC 4 cut(s) 284, 1489, 1512, 2792
AcoI YGGCCR 3 cut(s) 63, 668, 1124
AcsI RAATTY 6 cut(s) 1548, 1720, 2286, 2345, 2455, 2502
AcuI CTGAAG 3 cut(s) 330, 692, 2507
AfaI GTAC 2 cut(s) 1930, 2807
AfiI CCNNNNNNNGG 5 cut(s) 323, 491, 1114, 1795, 2600
AflII CTTAAG 1 cut(s) 2729
AflIII ACRYGT 2 cut(s) 633, 1674
AgeI ACCGGT 1 cut(s) 1448
AjnI CCWGG 2 cut(s) 60, 2763
AloI GAACNNNNNNTCC 2 cut(s) 466, 498
Alw21I GWGCWC 1 cut(s) 1346
Alw26I GTCTC 3 cut(s) 1194, 1538, 2657
AlwI GGATC 4 cut(s) 284, 1489, 1512, 2792
Ama87I CYCGRG 1 cut(s) 1196
Aor13HI TCCGGA 1 cut(s) 2290
AoxI GGCC 6 cut(s) 63, 160, 668, 1086, 1124, 1405
ApaI GGGCCC 1 cut(s) 1409
ApeKI GCWGC 3 cut(s) 213, 846, 993
ApoI RAATTY 6 cut(s) 1548, 1720, 2286, 2345, 2455, 2502
AseI ATTAAT 1 cut(s) 762
AsiGI ACCGGT 1 cut(s) 1448
Asp700I GAANNNNTTC 1 cut(s) 751
AspS9I GGNCC 7 cut(s) 373, 890, 1405, 1406, 2031, 2095, 2570
AsuC2I CCSGG 1 cut(s) 2595
AsuHPI GGTGA 6 cut(s) 250, 338, 682, 1231, 2026, 2574
AvaI CYCGRG 1 cut(s) 1196
AvaII GGWCC 5 cut(s) 373, 890, 2031, 2095, 2570
BaeGI GKGCMC 1 cut(s) 1409
BalI TGGCCA 2 cut(s) 670, 1126
BanII GRGCYC 2 cut(s) 1346, 1409
BarI GAAGNNNNNNTAC 2 cut(s) 951, 983
BauI CACGAG 2 cut(s) 2198, 2302
BbsI GAAGAC 3 cut(s) 898, 1596, 1686
Bbv12I GWGCWC 1 cut(s) 1346
BbvI GCAGC 3 cut(s) 200, 858, 1005
BccI CCATC 7 cut(s) 682, 902, 1639, 1936, 2594, 2642, 2701
BceAI ACGGC 1 cut(s) 50
BciT130I CCWGG 2 cut(s) 62, 2765
BciVI GTATCC 1 cut(s) 960
BclI TGATCA 1 cut(s) 402
BcnI CCSGG 1 cut(s) 2595
BcoDI GTCTC 3 cut(s) 1194, 1538, 2657
BfaI CTAG 5 cut(s) 926, 935, 1218, 1539, 2075
BfmI CTRYAG 1 cut(s) 2190
BfrI CTTAAG 1 cut(s) 2729
BfuI GTATCC 1 cut(s) 960
BglII AGATCT 1 cut(s) 937
BisI GCNGC 5 cut(s) 214, 847, 994, 1688, 2716
BlsI GCNGC 5 cut(s) 215, 848, 995, 1689, 2717
Bme1390I CCNGG 3 cut(s) 62, 2595, 2765
Bme18I GGWCC 5 cut(s) 373, 890, 2031, 2095, 2570
BmeT110I CYCGRG 1 cut(s) 1196
BmgT120I GGNCC 7 cut(s) 373, 890, 1405, 1406, 2031, 2095, 2570
BmiI GGNNCC 4 cut(s) 475, 892, 1407, 1716
BmrFI CCNGG 3 cut(s) 62, 2595, 2765
BmrI ACTGGG 1 cut(s) 712
BmsI GCATC 4 cut(s) 1735, 1770, 2307, 2524
BmuI ACTGGG 1 cut(s) 712
BpiI GAAGAC 3 cut(s) 898, 1596, 1686
BpmI CTGGAG 1 cut(s) 131
Bpu10I CCTNAGC 1 cut(s) 1649
BpuEI CTTGAG 4 cut(s) 614, 1103, 1606, 2320
BpuMI CCSGG 1 cut(s) 2595
BsaBI GATNNNNATC 1 cut(s) 738
BsaI GGTCTC 3 cut(s) 1194, 1538, 2657
BsaJI CCNNGG 5 cut(s) 1089, 1789, 1951, 2593, 2659
BsaWI WCCGGW 2 cut(s) 1448, 2290
BsaXI ACNNNNNCTCC 4 cut(s) 466, 496, 1699, 1729
Bsc4I CCNNNNNNNGG 5 cut(s) 323, 491, 1114, 1795, 2600
Bse118I RCCGGY 1 cut(s) 1448
Bse1I ACTGG 8 cut(s) 148, 261, 718, 1261, 1378, 2439, 2507, 2701
Bse8I GATNNNNATC 1 cut(s) 738
BseAI TCCGGA 1 cut(s) 2290
BseBI CCWGG 2 cut(s) 62, 2765
BseDI CCNNGG 5 cut(s) 1089, 1789, 1951, 2593, 2659
BseGI GGATG 3 cut(s) 175, 1785, 2712
BseJI GATNNNNATC 1 cut(s) 738
BseLI CCNNNNNNNGG 5 cut(s) 323, 491, 1114, 1795, 2600
BseMII CTCAG 8 cut(s) 391, 419, 912, 1062, 1331, 1663, 1674, 1734
BseNI ACTGG 8 cut(s) 148, 261, 718, 1261, 1378, 2439, 2507, 2701
BseSI GKGCMC 1 cut(s) 1409
BseXI GCAGC 3 cut(s) 200, 858, 1005
BseYI CCCAGC 3 cut(s) 1402, 1408, 2683
BsgI GTGCAG 2 cut(s) 2089, 2697
Bsh1236I CGCG 1 cut(s) 2609
BshFI GGCC 6 cut(s) 65, 162, 670, 1088, 1126, 1407
BshTI ACCGGT 1 cut(s) 1448
BsiHKAI GWGCWC 1 cut(s) 1346
BsiHKCI CYCGRG 1 cut(s) 1196
BsiSI CCGG 3 cut(s) 1449, 2291, 2595
BslFI GGGAC 1 cut(s) 876
BslI CCNNNNNNNGG 5 cut(s) 323, 491, 1114, 1795, 2600
BsmAI GTCTC 3 cut(s) 1194, 1538, 2657
BsmFI GGGAC 1 cut(s) 876
BsnI GGCC 6 cut(s) 65, 162, 670, 1088, 1126, 1407
Bso31I GGTCTC 3 cut(s) 1194, 1538, 2657
BsoBI CYCGRG 1 cut(s) 1196
Bsp120I GGGCCC 1 cut(s) 1405
Bsp1286I GDGCHC 2 cut(s) 1346, 1409
Bsp13I TCCGGA 1 cut(s) 2290
Bsp1407I TGTACA 1 cut(s) 2805
Bsp68I TCGCGA 1 cut(s) 2609
BspACI CCGC 4 cut(s) 1688, 2568, 2715, 2821
BspANI GGCC 6 cut(s) 65, 162, 670, 1088, 1126, 1407
BspCNI CTCAG 8 cut(s) 390, 420, 911, 1063, 1332, 1662, 1675, 1735
BspEI TCCGGA 1 cut(s) 2290
BspFNI CGCG 1 cut(s) 2609
BspLI GGNNCC 4 cut(s) 475, 892, 1407, 1716
BspPI GGATC 4 cut(s) 284, 1489, 1512, 2792
BspQI GCTCTTC 1 cut(s) 147
BspTI CTTAAG 1 cut(s) 2729
BspTNI GGTCTC 3 cut(s) 1194, 1538, 2657
BsrFI RCCGGY 1 cut(s) 1448
BsrGI TGTACA 1 cut(s) 2805
BsrI ACTGG 8 cut(s) 148, 261, 718, 1261, 1378, 2439, 2507, 2701
BssAI RCCGGY 1 cut(s) 1448
BssECI CCNNGG 5 cut(s) 1089, 1789, 1951, 2593, 2659
BssSI CACGAG 2 cut(s) 2198, 2302
BssT1I CCWWGG 3 cut(s) 1089, 1951, 2659
Bst2BI CACGAG 2 cut(s) 2198, 2302
Bst2UI CCWGG 2 cut(s) 62, 2765
Bst4CI ACNGT 6 cut(s) 113, 478, 1755, 1928, 2025, 2031
Bst6I CTCTTC 3 cut(s) 147, 783, 877
BstAFI CTTAAG 1 cut(s) 2729
BstAUI TGTACA 1 cut(s) 2805
BstC8I GCNNGC 6 cut(s) 138, 235, 686, 917, 1400, 1713
BstENI CCTNNNNNAGG 1 cut(s) 321
BstF5I GGATG 3 cut(s) 175, 1785, 2712
BstFNI CGCG 1 cut(s) 2609
BstMAI GTCTC 3 cut(s) 1194, 1538, 2657
BstMWI GCNNNNNNNGC 5 cut(s) 1404, 1712, 1851, 2186, 2798
BstNI CCWGG 2 cut(s) 62, 2765
BstNSI RCATGY 4 cut(s) 140, 637, 919, 1390
BstSCI CCNGG 3 cut(s) 60, 2593, 2763
BstSFI CTRYAG 1 cut(s) 2190
BstSLI GKGCMC 1 cut(s) 1409
BstUI CGCG 1 cut(s) 2609
BstV1I GCAGC 3 cut(s) 200, 858, 1005
BstV2I GAAGAC 3 cut(s) 898, 1596, 1686
BstX2I RGATCY 3 cut(s) 937, 1504, 2784
BstXI CCANNNNNNTGG 2 cut(s) 2423, 2495
BstYI RGATCY 3 cut(s) 937, 1504, 2784
BsuI GTATCC 1 cut(s) 960
BsuRI GGCC 6 cut(s) 65, 162, 670, 1088, 1126, 1407
BtsCI GGATG 3 cut(s) 175, 1785, 2712
BtsI GCAGTG 1 cut(s) 2685
BtsIMutI CAGTG 5 cut(s) 475, 725, 1254, 2685, 2694
BtuMI TCGCGA 1 cut(s) 2609
Cac8I GCNNGC 6 cut(s) 138, 235, 686, 917, 1400, 1713
Cfr10I RCCGGY 1 cut(s) 1448
Cfr13I GGNCC 7 cut(s) 373, 890, 1405, 1406, 2031, 2095, 2570
Csp6I GTAC 2 cut(s) 1929, 2806
CspAI ACCGGT 1 cut(s) 1448
CviQI GTAC 2 cut(s) 1929, 2806
DraI TTTAAA 1 cut(s) 1884
EaeI YGGCCR 3 cut(s) 63, 668, 1124
Eam1104I CTCTTC 3 cut(s) 147, 783, 877
EarI CTCTTC 3 cut(s) 147, 783, 877
Ecl136II GAGCTC 1 cut(s) 1344
Eco130I CCWWGG 3 cut(s) 1089, 1951, 2659
Eco147I AGGCCT 2 cut(s) 162, 1088
Eco24I GRGCYC 2 cut(s) 1346, 1409
Eco31I GGTCTC 3 cut(s) 1194, 1538, 2657
Eco32I GATATC 2 cut(s) 359, 2421
Eco47I GGWCC 5 cut(s) 373, 890, 2031, 2095, 2570
Eco53kI GAGCTC 1 cut(s) 1344
Eco57I CTGAAG 3 cut(s) 330, 692, 2507
Eco88I CYCGRG 1 cut(s) 1196
EcoICRI GAGCTC 1 cut(s) 1344
EcoNI CCTNNNNNAGG 1 cut(s) 321
EcoO109I RGGNCCY 1 cut(s) 890
EcoRI GAATTC 1 cut(s) 2502
EcoRII CCWGG 2 cut(s) 60, 2763
EcoRV GATATC 2 cut(s) 359, 2421
EcoT14I CCWWGG 3 cut(s) 1089, 1951, 2659
EcoT22I ATGCAT 1 cut(s) 36
EcoT38I GRGCYC 2 cut(s) 1346, 1409
ErhI CCWWGG 3 cut(s) 1089, 1951, 2659
FalI AAGNNNNNCTT 6 cut(s) 677, 709, 736, 768, 2257, 2289
FaqI GGGAC 1 cut(s) 876
FbaI TGATCA 1 cut(s) 402
Fnu4HI GCNGC 5 cut(s) 214, 847, 994, 1688, 2716
FokI GGATG 3 cut(s) 182, 1792, 2719
FriOI GRGCYC 2 cut(s) 1346, 1409
Fsp4HI GCNGC 5 cut(s) 214, 847, 994, 1688, 2716
FspBI CTAG 5 cut(s) 926, 935, 1218, 1539, 2075
GluI GCNGC 5 cut(s) 214, 847, 994, 1688, 2716
GsaI CCCAGC 3 cut(s) 1406, 1412, 2687
GsuI CTGGAG 1 cut(s) 131
HaeIII GGCC 6 cut(s) 65, 162, 670, 1088, 1126, 1407
HapII CCGG 3 cut(s) 1449, 2291, 2595
HincII GTYRAC 3 cut(s) 434, 1575, 1948
HindII GTYRAC 3 cut(s) 434, 1575, 1948
HindIII AAGCTT 1 cut(s) 1582
HpaII CCGG 3 cut(s) 1449, 2291, 2595
HphI GGTGA 6 cut(s) 250, 338, 682, 1231, 2026, 2574
Hpy166II GTNNAC 7 cut(s) 434, 859, 1298, 1575, 1948, 2723, 2806
Hpy8I GTNNAC 7 cut(s) 434, 859, 1298, 1575, 1948, 2723, 2806
HpyAV CCTTC 9 cut(s) 348, 737, 762, 881, 953, 1708, 1923, 2068, 2445
HpyCH4III ACNGT 6 cut(s) 113, 478, 1755, 1928, 2025, 2031
HpyCH4IV ACGT 1 cut(s) 1676
HpyF10VI GCNNNNNNNGC 5 cut(s) 1404, 1712, 1851, 2186, 2798
HpySE526I ACGT 1 cut(s) 1676
Kpn2I TCCGGA 1 cut(s) 2290
Ksp22I TGATCA 1 cut(s) 402
LguI GCTCTTC 1 cut(s) 147
LmnI GCTCC 3 cut(s) 107, 1720, 2120
Lsp1109I GCAGC 3 cut(s) 200, 858, 1005
LweI GCATC 4 cut(s) 1735, 1770, 2307, 2524
MaeI CTAG 5 cut(s) 926, 935, 1218, 1539, 2075
MaeII ACGT 1 cut(s) 1676
MaeIII GTNAC 6 cut(s) 256, 722, 928, 2025, 2375, 2692
MfeI CAATTG 2 cut(s) 1025, 2489
MflI RGATCY 3 cut(s) 937, 1504, 2784
MhlI GDGCHC 2 cut(s) 1346, 1409
MlsI TGGCCA 2 cut(s) 670, 1126
MluNI TGGCCA 2 cut(s) 670, 1126
MlyI GAGTC 6 cut(s) 167, 439, 1010, 1040, 2475, 2556
MmeI TCCRAC 6 cut(s) 76, 129, 552, 570, 900, 1757
Mox20I TGGCCA 2 cut(s) 670, 1126
Mph1103I ATGCAT 1 cut(s) 36
MroI TCCGGA 1 cut(s) 2290
MroXI GAANNNNTTC 1 cut(s) 751
MscI TGGCCA 2 cut(s) 670, 1126
MslI CAYNNNNRTG 4 cut(s) 14, 914, 1884, 2306
Msp20I TGGCCA 2 cut(s) 670, 1126
MspA1I CMGCKG 1 cut(s) 1690
MspCI CTTAAG 1 cut(s) 2729
MspI CCGG 3 cut(s) 1449, 2291, 2595
MspR9I CCNGG 3 cut(s) 62, 2595, 2765
MunI CAATTG 2 cut(s) 1025, 2489
MvaI CCWGG 2 cut(s) 62, 2765
MvnI CGCG 1 cut(s) 2609
MwoI GCNNNNNNNGC 5 cut(s) 1404, 1712, 1851, 2186, 2798
NciI CCSGG 1 cut(s) 2595
NlaIV GGNNCC 4 cut(s) 475, 892, 1407, 1716
NmuCI GTSAC 2 cut(s) 256, 2692
NruI TCGCGA 1 cut(s) 2609
NsiI ATGCAT 1 cut(s) 36
NspI RCATGY 4 cut(s) 140, 637, 919, 1390
PaeI GCATGC 2 cut(s) 140, 919
PceI AGGCCT 2 cut(s) 162, 1088
PciI ACATGT 1 cut(s) 633
PciSI GCTCTTC 1 cut(s) 147
PdmI GAANNNNTTC 1 cut(s) 751
PfoI TCCNGGA 1 cut(s) 2763
PinAI ACCGGT 1 cut(s) 1448
PkrI GCNGC 5 cut(s) 215, 848, 995, 1689, 2717
PleI GAGTC 6 cut(s) 167, 438, 1009, 1040, 2474, 2556
PpsI GAGTC 6 cut(s) 167, 438, 1009, 1040, 2474, 2556
PpuMI RGGWCCY 1 cut(s) 890
PscI ACATGT 1 cut(s) 633
PshBI ATTAAT 1 cut(s) 762
PsiI TTATAA 1 cut(s) 384
Psp124BI GAGCTC 1 cut(s) 1346
Psp5II RGGWCCY 1 cut(s) 890
Psp6I CCWGG 2 cut(s) 60, 2763
PspFI CCCAGC 3 cut(s) 1402, 1408, 2683
PspGI CCWGG 2 cut(s) 60, 2763
PspN4I GGNNCC 4 cut(s) 475, 892, 1407, 1716
PspOMI GGGCCC 1 cut(s) 1405
PspPI GGNCC 7 cut(s) 373, 890, 1405, 1406, 2031, 2095, 2570
PspPPI RGGWCCY 1 cut(s) 890
PsuI RGATCY 3 cut(s) 937, 1504, 2784
RruI TCGCGA 1 cut(s) 2609
RsaI GTAC 2 cut(s) 1930, 2807
RsaNI GTAC 2 cut(s) 1929, 2806
RseI CAYNNNNRTG 4 cut(s) 14, 914, 1884, 2306
SacI GAGCTC 1 cut(s) 1346
SapI GCTCTTC 1 cut(s) 147
SatI GCNGC 5 cut(s) 214, 847, 994, 1688, 2716
Sau96I GGNCC 7 cut(s) 373, 890, 1405, 1406, 2031, 2095, 2570
SchI GAGTC 6 cut(s) 167, 439, 1010, 1040, 2475, 2556
ScrFI CCNGG 3 cut(s) 62, 2595, 2765
SduI GDGCHC 2 cut(s) 1346, 1409
SfaNI GCATC 4 cut(s) 1735, 1770, 2307, 2524
SfcI CTRYAG 1 cut(s) 2190
SinI GGWCC 5 cut(s) 373, 890, 2031, 2095, 2570
SmiI ATTTAAAT 1 cut(s) 1884
SmiMI CAYNNNNRTG 4 cut(s) 14, 914, 1884, 2306
SmlI CTYRAG 5 cut(s) 593, 1082, 1585, 2335, 2729
SmoI CTYRAG 5 cut(s) 593, 1082, 1585, 2335, 2729
SphI GCATGC 2 cut(s) 140, 919
SseBI AGGCCT 2 cut(s) 162, 1088
SsiI CCGC 4 cut(s) 1688, 2568, 2715, 2821
SspI AATATT 2 cut(s) 822, 2113
SspMI CTAG 5 cut(s) 926, 935, 1218, 1539, 2075
SstI GAGCTC 1 cut(s) 1346
StuI AGGCCT 2 cut(s) 162, 1088
StyD4I CCNGG 3 cut(s) 60, 2593, 2763
StyI CCWWGG 3 cut(s) 1089, 1951, 2659
SwaI ATTTAAAT 1 cut(s) 1884
TaaI ACNGT 6 cut(s) 113, 478, 1755, 1928, 2025, 2031
TaiI ACGT 1 cut(s) 1679
TaqI TCGA 2 cut(s) 1596, 2532
TatI WGTACW 1 cut(s) 2805
TauI GCSGC 2 cut(s) 1690, 2718
TscAI CASTG 5 cut(s) 475, 725, 1261, 2685, 2701
TseFI GTSAC 2 cut(s) 256, 2692
TseI GCWGC 3 cut(s) 213, 846, 993
Tsp45I GTSAC 2 cut(s) 256, 2692
TspDTI ATGAA 6 cut(s) 406, 1191, 1541, 2075, 2396, 2634
TspGWI ACGGA 1 cut(s) 1451
TspRI CASTG 5 cut(s) 475, 725, 1261, 2685, 2701
Vha464I CTTAAG 1 cut(s) 2729
VpaK11BI GGWCC 5 cut(s) 373, 890, 2031, 2095, 2570
VspI ATTAAT 1 cut(s) 762
XagI CCTNNNNNAGG 1 cut(s) 321
XapI RAATTY 6 cut(s) 1548, 1720, 2286, 2345, 2455, 2502
XceI RCATGY 4 cut(s) 140, 637, 919, 1390
XcmI CCANNNNNNNNNTGG 2 cut(s) 1939, 2089
XmnI GAANNNNTTC 1 cut(s) 751
XspI CTAG 5 cut(s) 926, 935, 1218, 1539, 2075
Zsp2I ATGCAT 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.