RchiOBHm_Chr1g0379681

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000028
Physical Location & Seq
Reverse (-)
65671964 .. 65676320
4357 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60299

Sequence Viewer

Length: 3183 bp
ATGAGTGCTAGATCATCCATCCATTCTGGTTCTGTGTTGGCTCGGCTTCTATGGCTGGTCATCATTTCGTCTGCTGCTACCTGTTGTTGTTGTTCCAGTGCTGCTGGGAATATCAGTACTTCGAATGACGTCAATGTTCGGTGTATGGCGAGGGAAAAACATGCTCTTCTTCAGTTCAAACAAGGGTTGGTGGATGACTCAAATGATCTAGCCCCTTGGGAAATCATGGAAGATTGTTGCGAGTGGACAGGAATTGCATGCGATTTCCAAACAGGTCATGTCATCATGCTAGATCTCAGTAATACTCATTATTTTAGTTTAAGAGGTGAGATTGGTCCCTCACTACTTGAATTGCCATATCTATATTACTTGGACCTCGGTTCTAATTCTTTTAATGGAACGATTCCCAAGTTCTTAGGTTCTTTGAGTCGGTTGAAAGTACTCAAACTTGGATACAACAGGTTTAGCGGATTCATTCCTCCCCAACTTGGCAATCTATCCAATTTGCATACTCTTGATCTTTCATGGAACTATGTTACTTCTGATAATCTCAAGTGGGTATCTCGGCTTTCTTCCTTGAGATACTTGAACATGTCAGCTCTTAATTTCTCTAGTGCTGTAAATTGGGCCCAATCTATAAGCCAGCTCCCTTCACTGATATTGCTTCAGTTAGGTTCATGTGATCTTCCTGATGTTGATACGGCATCACTTTCCTTTATTAATTCTTCGACCTCTCTCCAAGTATTTGATCTCTCTTTCAATTTCCTCATCAGTTCTTCAGTATTTTATTGGATAGGCAGTGTCAGCAAGAACCCTGTTTCCATTGACCTATCTAATAGCAGGATTAAAGGTCCCATCCCAGATGCTTTCACAAACATGGATTCTCTGTTATCTCTTGACCTCTCTTCTAATCAACTTGAAGGTGGCATACCAAAATCCTTTCGAAGCCTATGCAGATTGGAAAAATTGTATTTATTGTCAAACAATTTTTCAGACAGACTTGAACAATCTATAGGCAACTTGTCTTGTGCACAGAATACCCTTAAGTCACTCAACTTGAGTGATAATCTGTGGTGGGGGCCATTTCCTGATGATCTTACAAGGTTTGTATCCTTGGAAGATTTGGACATTTACAATGCCACTATGAGCGGGTCACTCCCAATGAGCTTTCGGCAACTTTCCCAGCTAAGAACCTTAAGTCTAAGTCATAACCGGTTAAGTGGCTCATTCCCAGATGTTACAGGTCTTTCATTGTTATCATCGATAGATCTTTCCGATAATCAACTGAATGGCTCTCTACATGACAGTTTAGGTCAACTTTCCAGCCTTACACATTTAGATCTTTCTCGAAATTCTCTGAATGTTGTCTTAACTGAAGCCCACTTCTTGAACCTGTCTAAACTACAGTATGTGGATGTTTCTTATAATCCAACTTTTTCTTTCCATGTGAGCTCAAGTTGGAATCCACCTTTTCAGCTTACTATTTTAAAAATGGCATCTTGCAATGTCGGCCCTGCTTTTCCTAAATGGATACACACACAGAGACAACTTAGGCAACTTGAATTGTCTAATGCTGGGATATCAGATTCAATACCTGATAATTTTTGGGCTCTAGCTTGCAGCTTACCTCGGTTAAATCTCTCTTTCAACCAAATCCATGGAAGGTTTCCGGATCTATCATCATTTCCGAATCTACCATCAAGAAACTGCTTCATTGGTTTGATGGACTTGAGTTCCAATCGGTTTTCTGGTGCACTCCCACCATTTCATAAAGATTTAACTGGATTGTTGCTCTCCAAAAACAAGTTTTCAGGGGACCTATCTTCCATATGTTCAACTTGGGCTCCATATTTGTATATACTCGACCTTTCTAATAATCTGCTATCAGGGGAACTCCCTAATTGTTGGGTTCAATTTCAAGGACTGGCCGTGTTGAATATGGCGAACAATAGTTTGTCTGGGAAAATACCAAGCTCATTTGGTTCTCTCAAGTATCTTATGCAATTACAATTACAACGTAACAATTTTTCAGGTGAACTGCCTTCTCTGGAGAACTGTACGCAGTTAGTTTTGGTTGACCTCGGATTCAATAACATATCCGGAAAGATACAAGCATGGATAGGCAGCAGCCTTAAACAGTTGCGGGTTCTACAATTTAGGTCAAACCACTTCTCTGGATGCATTCCCTCACGTATATGTAGTCTGCCTCTCATTCGTGTTTTTGACCTCTCTCAAAACAATATATCTGGAGTATTGCCACATTGCCTCAACAATTTGACAGCATTCTCTTCGGTTTCTCCGGATGAGATGGATTATTTGCCAGCTCATTCTGATTTTGTCTTACAACTTATTTGGAAAGGGGCAGAGAGGGAGTATGGGGAAAACGTTAGGTATTTGAGGAGCATTGACATTTCAAGCAATAACTTAACTGGGGTGATTCCGGAAAACATAACATATATGCTTGGGTTGCGTTCTCTTAACCTTTCAAGAAACAGTTTGACCGGGGTGATTCCTGGAAAGTTTGGTCAGTTGGAGGTGCTAGAAGTTCTTGATTTGTCAAGAAACCACCTATCTGGTAGCATTCCTGATAGTTTTAGGAACTTGCATTCTATAGATGTGTTGGACTTATCGGTCAACAACTTGTCCGGAAGAATTCCAACGAGCCCCCAACTCATGACTTTTTGTGAATCTTCATTCACTGGAAATGTTGGACTTTACGGGCCGCAGCTAACAAGAAAATGCCCGGGAGATAGACAGAGTGAAGATCCAAAAGTCACTGGTGGTACTGAAAGTGCTGAGACTGAAAATGATGGTGATGGTTTCATAACACCAGGGTTTTATGCTGCCATAGGGATTGGATTCTTCATAGGATTTGTGGGAGTCTGCCTTGCTTTACCGCCTGAGACTTCTTGGAGATACGTACAGCAGTACGCTGCTGTCATGTGTGGAGATGAGCTTACCCGAGAACTTGGAAGTTTGATTATTCGGGCCTCTGATGCGGGTGGTTTCAGATCCAAAGTGTCTTTGCTTTCTCTTTCAGCAAGTCAAGGTCTCAGATGCTTGTTGATTTTCTGTGGATCACCCGAAAGAAAGACTCTGTCGTTATGGACTAAGCAATTGAGAGTTAGCTCTGGGAATGGGATGCCTCTTGAAGATGGCCATATCTGGAGAAAATATGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1060

Amino Acids

116.83

Weight (kDa)

6.04

Isoelectric Point (pI)

40.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 51 - 88 7e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 97 - 265 1.2e-06 Leucine-rich repeat region
LRR_8 PF13855 119 - 178 3.4e-08 Leucine rich repeat
LRR_8 PF13855 274 - 330 5.6e-09 Leucine rich repeat
LRR_14 PF23598 348 - 522 4.3e-13 Leucine-rich repeat region
LRR_8 PF13855 798 - 857 1.2e-12 Leucine rich repeat
LRR_8 PF13855 823 - 881 3.1e-12 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1425
AasI GACNNNNNNGTC 1 cut(s) 2630
AatII GACGTC 1 cut(s) 132
AccBSI CCGCTC 1 cut(s) 1149
AccIII TCCGGA 5 cut(s) 1669, 2099, 2299, 2440, 2645
AciI CCGC 6 cut(s) 468, 1149, 2143, 2723, 2897, 2999
AclI AACGTT 1 cut(s) 2385
AclWI GGATC 4 cut(s) 1680, 2759, 3006, 3085
AcoI YGGCCR 2 cut(s) 1926, 3157
AcsI RAATTY 2 cut(s) 1351, 2652
AcuI CTGAAG 4 cut(s) 155, 650, 762, 1395
AcyI GRCGYC 1 cut(s) 129
AfaI GTAC 6 cut(s) 118, 441, 2059, 2785, 2922, 2930
AfiI CCNNNNNNNGG 1 cut(s) 488
AflII CTTAAG 2 cut(s) 1043, 1195
AflIII ACRYGT 1 cut(s) 591
AgeI ACCGGT 1 cut(s) 1212
AjnI CCWGG 2 cut(s) 2512, 2830
AloI GAACNNNNNNTCC 2 cut(s) 803, 835
Alw21I GWGCWC 3 cut(s) 1033, 1454, 1756
Alw26I GTCTC 4 cut(s) 1537, 2792, 2897, 3056
Alw44I GTGCAC 2 cut(s) 1029, 1752
AlwI GGATC 4 cut(s) 1680, 2759, 3006, 3085
Ama87I CYCGRG 2 cut(s) 2743, 2961
Aor13HI TCCGGA 5 cut(s) 1669, 2099, 2299, 2440, 2645
AoxI GGCC 7 cut(s) 627, 1079, 1510, 1926, 2720, 2988, 3157
ApaI GGGCCC 1 cut(s) 631
ApaLI GTGCAC 2 cut(s) 1029, 1752
ApeKI GCWGC 8 cut(s) 74, 101, 1620, 2124, 2127, 2725, 2843, 2933
ApoI RAATTY 2 cut(s) 1351, 2652
AseI ATTAAT 1 cut(s) 720
AsiGI ACCGGT 1 cut(s) 1212
AsuC2I CCSGG 3 cut(s) 2503, 2744, 2745
AsuHPI GGTGA 6 cut(s) 338, 2045, 2446, 2518, 2825, 3072
AsuII TTCGAA 2 cut(s) 122, 943
AvaI CYCGRG 2 cut(s) 2743, 2961
AvaII GGWCC 4 cut(s) 335, 373, 851, 1816
BaeGI GKGCMC 3 cut(s) 631, 1033, 1756
BalI TGGCCA 1 cut(s) 3159
BanII GRGCYC 5 cut(s) 631, 1454, 1612, 1846, 2666
BarI GAAGNNNNNNTAC 2 cut(s) 912, 944
Bbv12I GWGCWC 3 cut(s) 1033, 1454, 1756
BbvI GCAGC 8 cut(s) 61, 88, 1632, 2136, 2139, 2737, 2830, 2920
BccI CCATC 8 cut(s) 26, 863, 1705, 1717, 2302, 2804, 2810, 3149
BceAI ACGGC 2 cut(s) 717, 1913
BcgI CGANNNNNNTGC 4 cut(s) 933, 967, 2271, 2305
BciT130I CCWGG 2 cut(s) 2514, 2832
BciVI GTATCC 3 cut(s) 446, 1120, 1524
BcnI CCSGG 3 cut(s) 2503, 2744, 2745
BcoDI GTCTC 4 cut(s) 1537, 2792, 2897, 3056
BfaI CTAG 6 cut(s) 9, 209, 290, 612, 1613, 2540
BfmI CTRYAG 3 cut(s) 1011, 1403, 2610
BfrI CTTAAG 2 cut(s) 1043, 1195
BfuI GTATCC 3 cut(s) 446, 1120, 1524
BglII AGATCT 3 cut(s) 292, 1267, 1339
BisI GCNGC 9 cut(s) 75, 102, 1621, 2125, 2128, 2723, 2726, 2844, 2934
BlsI GCNGC 9 cut(s) 76, 103, 1622, 2126, 2129, 2724, 2727, 2845, 2935
BmcAI AGTACT 2 cut(s) 118, 441
Bme1390I CCNGG 5 cut(s) 2503, 2514, 2744, 2745, 2832
Bme18I GGWCC 4 cut(s) 335, 373, 851, 1816
BmeT110I CYCGRG 2 cut(s) 2743, 2961
BmiI GGNNCC 6 cut(s) 337, 629, 853, 1080, 1817, 1845
BmrFI CCNGG 5 cut(s) 2503, 2514, 2744, 2745, 2832
BmrI ACTGGG 1 cut(s) 2439
BmsI GCATC 7 cut(s) 713, 853, 1505, 2168, 2986, 3047, 3132
BmuI ACTGGG 1 cut(s) 2439
BpmI CTGGAG 2 cut(s) 2069, 2268
Bpu14I TTCGAA 2 cut(s) 122, 943
BpuEI CTTGAG 6 cut(s) 536, 598, 1078, 1438, 1750, 1973
BpuMI CCSGG 3 cut(s) 2503, 2744, 2745
Bsa29I ATCGAT 1 cut(s) 1262
BsaAI YACGTR 2 cut(s) 2192, 2920
BsaHI GRCGYC 1 cut(s) 129
BsaI GGTCTC 1 cut(s) 3056
BsaJI CCNNGG 9 cut(s) 215, 376, 1113, 1628, 1657, 2080, 2502, 2743, 2831
BsaWI WCCGGW 6 cut(s) 1212, 1669, 2099, 2299, 2440, 2645
BsaXI ACNNNNNCTCC 2 cut(s) 1828, 1858
Bsc4I CCNNNNNNNGG 1 cut(s) 488
Bse118I RCCGGY 1 cut(s) 1212
Bse1I ACTGG 6 cut(s) 96, 1786, 1929, 2434, 2704, 2782
Bse3DI GCAATG 2 cut(s) 1510, 2260
BseAI TCCGGA 5 cut(s) 1669, 2099, 2299, 2440, 2645
BseBI CCWGG 2 cut(s) 2514, 2832
BseCI ATCGAT 1 cut(s) 1262
BseDI CCNNGG 9 cut(s) 215, 376, 1113, 1628, 1657, 2080, 2502, 2743, 2831
BseGI GGATG 8 cut(s) 14, 18, 199, 855, 1420, 2183, 2308, 3147
BseLI CCNNNNNNNGG 1 cut(s) 488
BseMI GCAATG 2 cut(s) 1510, 2260
BseMII CTCAG 4 cut(s) 310, 2787, 2892, 3067
BseNI ACTGG 6 cut(s) 96, 1786, 1929, 2434, 2704, 2782
BseRI GAGGAG 1 cut(s) 2413
BseSI GKGCMC 3 cut(s) 631, 1033, 1756
BseXI GCAGC 8 cut(s) 61, 88, 1632, 2136, 2139, 2737, 2830, 2920
BseYI CCCAGC 3 cut(s) 104, 1182, 1574
BshFI GGCC 7 cut(s) 629, 1081, 1512, 1928, 2722, 2990, 3159
BshTI ACCGGT 1 cut(s) 1212
BshVI ATCGAT 1 cut(s) 1262
BsiHKAI GWGCWC 3 cut(s) 1033, 1454, 1756
BsiHKCI CYCGRG 2 cut(s) 2743, 2961
BsiSI CCGG 8 cut(s) 1213, 1670, 2100, 2300, 2441, 2502, 2646, 2744
BslFI GGGAC 3 cut(s) 321, 837, 1829
BslI CCNNNNNNNGG 1 cut(s) 488
BsmAI GTCTC 4 cut(s) 1537, 2792, 2897, 3056
BsmFI GGGAC 3 cut(s) 321, 837, 1829
BsmI GAATGC 4 cut(s) 2181, 2282, 2580, 2605
BsnI GGCC 7 cut(s) 629, 1081, 1512, 1928, 2722, 2990, 3159
Bso31I GGTCTC 1 cut(s) 3056
BsoBI CYCGRG 2 cut(s) 2743, 2961
Bsp119I TTCGAA 2 cut(s) 122, 943
Bsp120I GGGCCC 1 cut(s) 627
Bsp1286I GDGCHC 7 cut(s) 631, 1033, 1454, 1612, 1756, 1846, 2666
Bsp13I TCCGGA 5 cut(s) 1669, 2099, 2299, 2440, 2645
Bsp19I CCATGG 1 cut(s) 1657
BspACI CCGC 6 cut(s) 468, 1149, 2143, 2723, 2897, 2999
BspANI GGCC 7 cut(s) 629, 1081, 1512, 1928, 2722, 2990, 3159
BspCNI CTCAG 4 cut(s) 309, 2788, 2893, 3066
BspDI ATCGAT 1 cut(s) 1262
BspEI TCCGGA 5 cut(s) 1669, 2099, 2299, 2440, 2645
BspHI TCATGA 1 cut(s) 2673
BspLI GGNNCC 6 cut(s) 337, 629, 853, 1080, 1817, 1845
BspPI GGATC 4 cut(s) 1680, 2759, 3006, 3085
BspQI GCTCTTC 1 cut(s) 171
BspT104I TTCGAA 2 cut(s) 122, 943
BspTI CTTAAG 2 cut(s) 1043, 1195
BspTNI GGTCTC 1 cut(s) 3056
BsrBI CCGCTC 1 cut(s) 1149
BsrDI GCAATG 2 cut(s) 1510, 2260
BsrFI RCCGGY 1 cut(s) 1212
BsrI ACTGG 6 cut(s) 96, 1786, 1929, 2434, 2704, 2782
BssAI RCCGGY 1 cut(s) 1212
BssECI CCNNGG 9 cut(s) 215, 376, 1113, 1628, 1657, 2080, 2502, 2743, 2831
BssNI GRCGYC 1 cut(s) 129
BssT1I CCWWGG 3 cut(s) 215, 1113, 1657
Bst2UI CCWGG 2 cut(s) 2514, 2832
Bst4CI ACNGT 5 cut(s) 1307, 1407, 2057, 2139, 2495
Bst6I CTCTTC 3 cut(s) 171, 910, 2293
BstACI GRCGYC 1 cut(s) 129
BstAFI CTTAAG 2 cut(s) 1043, 1195
BstBAI YACGTR 2 cut(s) 2192, 2920
BstBI TTCGAA 2 cut(s) 122, 943
BstC8I GCNNGC 4 cut(s) 259, 644, 1618, 2322
BstDEI CTNAG 9 cut(s) 296, 415, 1187, 1202, 1550, 2796, 2901, 3053, 3111
BstDSI CCRYGG 1 cut(s) 1657
BstF5I GGATG 8 cut(s) 14, 18, 199, 855, 1420, 2183, 2308, 3147
BstMAI GTCTC 4 cut(s) 1537, 2792, 2897, 3056
BstMWI GCNNNNNNNGC 5 cut(s) 52, 804, 1509, 2467, 2996
BstNI CCWGG 2 cut(s) 2514, 2832
BstNSI RCATGY 3 cut(s) 164, 261, 595
BstSCI CCNGG 5 cut(s) 2501, 2512, 2742, 2743, 2830
BstSFI CTRYAG 3 cut(s) 1011, 1403, 2610
BstSLI GKGCMC 3 cut(s) 631, 1033, 1756
BstSNI TACGTA 1 cut(s) 2920
BstV1I GCAGC 8 cut(s) 61, 88, 1632, 2136, 2139, 2737, 2830, 2920
BstX2I RGATCY 6 cut(s) 292, 1267, 1339, 1672, 2764, 3011
BstXI CCANNNNNNTGG 3 cut(s) 1658, 2174, 2573
BstYI RGATCY 6 cut(s) 292, 1267, 1339, 1672, 2764, 3011
Bsu15I ATCGAT 1 cut(s) 1262
BsuI GTATCC 3 cut(s) 446, 1120, 1524
BsuRI GGCC 7 cut(s) 629, 1081, 1512, 1928, 2722, 2990, 3159
BsuTUI ATCGAT 1 cut(s) 1262
BtgI CCRYGG 1 cut(s) 1657
BtsCI GGATG 8 cut(s) 14, 18, 199, 855, 1420, 2183, 2308, 3147
BtsI GCAGTG 1 cut(s) 805
BtsIMutI CAGTG 5 cut(s) 103, 653, 805, 2697, 2775
Cac8I GCNNGC 4 cut(s) 259, 644, 1618, 2322
CciI TCATGA 1 cut(s) 2673
Cfr10I RCCGGY 1 cut(s) 1212
Cfr9I CCCGGG 1 cut(s) 2743
ClaI ATCGAT 1 cut(s) 1262
Csp6I GTAC 6 cut(s) 117, 440, 2058, 2784, 2921, 2929
CspAI ACCGGT 1 cut(s) 1212
CviQI GTAC 6 cut(s) 117, 440, 2058, 2784, 2921, 2929
DdeI CTNAG 9 cut(s) 296, 415, 1187, 1202, 1550, 2796, 2901, 3053, 3111
DraI TTTAAA 1 cut(s) 1488
DrdI GACNNNNNNGTC 1 cut(s) 2630
DseDI GACNNNNNNGTC 1 cut(s) 2630
EaeI YGGCCR 2 cut(s) 1926, 3157
Eam1104I CTCTTC 3 cut(s) 171, 910, 2293
EarI CTCTTC 3 cut(s) 171, 910, 2293
Ecl136II GAGCTC 1 cut(s) 1452
Eco105I TACGTA 1 cut(s) 2920
Eco130I CCWWGG 3 cut(s) 215, 1113, 1657
Eco24I GRGCYC 5 cut(s) 631, 1454, 1612, 1846, 2666
Eco31I GGTCTC 1 cut(s) 3056
Eco32I GATATC 1 cut(s) 1581
Eco47I GGWCC 4 cut(s) 335, 373, 851, 1816
Eco53kI GAGCTC 1 cut(s) 1452
Eco57I CTGAAG 4 cut(s) 155, 650, 762, 1395
Eco88I CYCGRG 2 cut(s) 2743, 2961
EcoICRI GAGCTC 1 cut(s) 1452
EcoO109I RGGNCCY 2 cut(s) 851, 1816
EcoRI GAATTC 1 cut(s) 2652
EcoRII CCWGG 2 cut(s) 2512, 2830
EcoRV GATATC 1 cut(s) 1581
EcoT14I CCWWGG 3 cut(s) 215, 1113, 1657
EcoT22I ATGCAT 1 cut(s) 2183
EcoT38I GRGCYC 5 cut(s) 631, 1454, 1612, 1846, 2666
ErhI CCWWGG 3 cut(s) 215, 1113, 1657
FaqI GGGAC 3 cut(s) 321, 837, 1829
FauI CCCGC 3 cut(s) 1142, 2136, 2992
FauNDI CATATG 1 cut(s) 1829
Fnu4HI GCNGC 9 cut(s) 75, 102, 1621, 2125, 2128, 2723, 2726, 2844, 2934
FokI GGATG 7 cut(s) 5, 206, 842, 1427, 2190, 2315, 3154
FriOI GRGCYC 5 cut(s) 631, 1454, 1612, 1846, 2666
Fsp4HI GCNGC 9 cut(s) 75, 102, 1621, 2125, 2128, 2723, 2726, 2844, 2934
FspBI CTAG 6 cut(s) 9, 209, 290, 612, 1613, 2540
GluI GCNGC 9 cut(s) 75, 102, 1621, 2125, 2128, 2723, 2726, 2844, 2934
GsaI CCCAGC 3 cut(s) 108, 1186, 1578
GsuI CTGGAG 2 cut(s) 2069, 2268
HaeIII GGCC 7 cut(s) 629, 1081, 1512, 1928, 2722, 2990, 3159
HapII CCGG 8 cut(s) 1213, 1670, 2100, 2300, 2441, 2502, 2646, 2744
Hin1I GRCGYC 1 cut(s) 129
HincII GTYRAC 3 cut(s) 1316, 2077, 2635
HindII GTYRAC 3 cut(s) 1316, 2077, 2635
HpaII CCGG 8 cut(s) 1213, 1670, 2100, 2300, 2441, 2502, 2646, 2744
HphI GGTGA 6 cut(s) 338, 2045, 2446, 2518, 2825, 3072
Hpy166II GTNNAC 7 cut(s) 246, 1031, 1316, 1754, 2036, 2077, 2635
Hpy8I GTNNAC 7 cut(s) 246, 1031, 1316, 1754, 2036, 2077, 2635
HpyAV CCTTC 4 cut(s) 660, 914, 1656, 2052
HpyCH4III ACNGT 5 cut(s) 1307, 1407, 2057, 2139, 2495
HpyCH4IV ACGT 5 cut(s) 129, 2017, 2191, 2385, 2919
HpyF10VI GCNNNNNNNGC 5 cut(s) 52, 804, 1509, 2467, 2996
HpyF3I CTNAG 9 cut(s) 296, 415, 1187, 1202, 1550, 2796, 2901, 3053, 3111
HpySE526I ACGT 5 cut(s) 129, 2017, 2191, 2385, 2919
Hsp92I GRCGYC 1 cut(s) 129
Kpn2I TCCGGA 5 cut(s) 1669, 2099, 2299, 2440, 2645
LguI GCTCTTC 1 cut(s) 171
LmnI GCTCC 3 cut(s) 651, 1849, 2400
Lsp1109I GCAGC 8 cut(s) 61, 88, 1632, 2136, 2139, 2737, 2830, 2920
LweI GCATC 7 cut(s) 713, 853, 1505, 2168, 2986, 3047, 3132
MaeI CTAG 6 cut(s) 9, 209, 290, 612, 1613, 2540
MaeII ACGT 5 cut(s) 129, 2017, 2191, 2385, 2919
MaeIII GTNAC 6 cut(s) 535, 1047, 1152, 1237, 2018, 2773
MbiI CCGCTC 1 cut(s) 1149
MfeI CAATTG 1 cut(s) 3116
MflI RGATCY 6 cut(s) 292, 1267, 1339, 1672, 2764, 3011
MhlI GDGCHC 7 cut(s) 631, 1033, 1454, 1612, 1756, 1846, 2666
MlsI TGGCCA 1 cut(s) 3159
MluNI TGGCCA 1 cut(s) 3159
MlyI GAGTC 4 cut(s) 191, 436, 2889, 3088
MmeI TCCRAC 6 cut(s) 1439, 1454, 2511, 2601, 2681, 2689
Mox20I TGGCCA 1 cut(s) 3159
Mph1103I ATGCAT 1 cut(s) 2183
MroI TCCGGA 5 cut(s) 1669, 2099, 2299, 2440, 2645
MscI TGGCCA 1 cut(s) 3159
MslI CAYNNNNRTG 2 cut(s) 875, 2194
Msp20I TGGCCA 1 cut(s) 3159
MspCI CTTAAG 2 cut(s) 1043, 1195
MspI CCGG 8 cut(s) 1213, 1670, 2100, 2300, 2441, 2502, 2646, 2744
MspR9I CCNGG 5 cut(s) 2503, 2514, 2744, 2745, 2832
MunI CAATTG 1 cut(s) 3116
Mva1269I GAATGC 4 cut(s) 2181, 2282, 2580, 2605
MvaI CCWGG 2 cut(s) 2514, 2832
MwoI GCNNNNNNNGC 5 cut(s) 52, 804, 1509, 2467, 2996
NciI CCSGG 3 cut(s) 2503, 2744, 2745
NcoI CCATGG 1 cut(s) 1657
NdeI CATATG 1 cut(s) 1829
NlaIV GGNNCC 6 cut(s) 337, 629, 853, 1080, 1817, 1845
NmeAIII GCCGAG 2 cut(s) 22, 544
NmuCI GTSAC 3 cut(s) 1047, 1152, 2773
NsiI ATGCAT 1 cut(s) 2183
NspI RCATGY 3 cut(s) 164, 261, 595
NspV TTCGAA 2 cut(s) 122, 943
PaeI GCATGC 1 cut(s) 261
PagI TCATGA 1 cut(s) 2673
PciI ACATGT 1 cut(s) 591
PciSI GCTCTTC 1 cut(s) 171
PctI GAATGC 4 cut(s) 2181, 2282, 2580, 2605
PflFI GACNNNGTC 1 cut(s) 3097
PfoI TCCNGGA 1 cut(s) 2512
PinAI ACCGGT 1 cut(s) 1212
PkrI GCNGC 9 cut(s) 76, 103, 1622, 2126, 2129, 2724, 2727, 2845, 2935
PleI GAGTC 4 cut(s) 191, 435, 2888, 3088
PpsI GAGTC 4 cut(s) 191, 435, 2888, 3088
Ppu21I YACGTR 2 cut(s) 2192, 2920
PpuMI RGGWCCY 2 cut(s) 851, 1816
PscI ACATGT 1 cut(s) 591
PshBI ATTAAT 1 cut(s) 720
PsiI TTATAA 1 cut(s) 1425
Psp124BI GAGCTC 1 cut(s) 1454
Psp1406I AACGTT 1 cut(s) 2385
Psp5II RGGWCCY 2 cut(s) 851, 1816
Psp6I CCWGG 2 cut(s) 2512, 2830
PspFI CCCAGC 3 cut(s) 104, 1182, 1574
PspGI CCWGG 2 cut(s) 2512, 2830
PspN4I GGNNCC 6 cut(s) 337, 629, 853, 1080, 1817, 1845
PspOMI GGGCCC 1 cut(s) 627
PspPPI RGGWCCY 2 cut(s) 851, 1816
PsuI RGATCY 6 cut(s) 292, 1267, 1339, 1672, 2764, 3011
PsyI GACNNNGTC 1 cut(s) 3097
RsaI GTAC 6 cut(s) 118, 441, 2059, 2785, 2922, 2930
RsaNI GTAC 6 cut(s) 117, 440, 2058, 2784, 2921, 2929
RseI CAYNNNNRTG 2 cut(s) 875, 2194
SacI GAGCTC 1 cut(s) 1454
SapI GCTCTTC 1 cut(s) 171
SatI GCNGC 9 cut(s) 75, 102, 1621, 2125, 2128, 2723, 2726, 2844, 2934
ScaI AGTACT 2 cut(s) 118, 441
SchI GAGTC 4 cut(s) 191, 436, 2889, 3088
ScrFI CCNGG 5 cut(s) 2503, 2514, 2744, 2745, 2832
SduI GDGCHC 7 cut(s) 631, 1033, 1454, 1612, 1756, 1846, 2666
SfaNI GCATC 7 cut(s) 713, 853, 1505, 2168, 2986, 3047, 3132
SfcI CTRYAG 3 cut(s) 1011, 1403, 2610
SfuI TTCGAA 2 cut(s) 122, 943
SinI GGWCC 4 cut(s) 335, 373, 851, 1816
SmaI CCCGGG 1 cut(s) 2745
SmiMI CAYNNNNRTG 2 cut(s) 875, 2194
SmlI CTYRAG 8 cut(s) 551, 577, 1043, 1057, 1195, 1453, 1729, 1988
SmoI CTYRAG 8 cut(s) 551, 577, 1043, 1057, 1195, 1453, 1729, 1988
SnaBI TACGTA 1 cut(s) 2920
SphI GCATGC 1 cut(s) 261
SsiI CCGC 6 cut(s) 468, 1149, 2143, 2723, 2897, 2999
SspMI CTAG 6 cut(s) 9, 209, 290, 612, 1613, 2540
SstI GAGCTC 1 cut(s) 1454
StyD4I CCNGG 5 cut(s) 2501, 2512, 2742, 2743, 2830
StyI CCWWGG 3 cut(s) 215, 1113, 1657
TaaI ACNGT 5 cut(s) 1307, 1407, 2057, 2139, 2495
TaiI ACGT 5 cut(s) 132, 2020, 2194, 2388, 2922
TaqI TCGA 6 cut(s) 122, 728, 943, 1262, 1348, 1863
TaqII GACCGA 1 cut(s) 2620
TatI WGTACW 2 cut(s) 116, 439
TauI GCSGC 1 cut(s) 2725
TscAI CASTG 5 cut(s) 103, 660, 805, 2704, 2782
TseFI GTSAC 3 cut(s) 1047, 1152, 2773
TseI GCWGC 8 cut(s) 74, 101, 1620, 2124, 2127, 2725, 2843, 2933
Tsp45I GTSAC 3 cut(s) 1047, 1152, 2773
TspDTI ATGAA 9 cut(s) 463, 513, 666, 1239, 1702, 1757, 2682, 2812, 2854
TspMI CCCGGG 1 cut(s) 2743
TspRI CASTG 5 cut(s) 103, 660, 805, 2704, 2782
Tth111I GACNNNGTC 1 cut(s) 3097
Vha464I CTTAAG 2 cut(s) 1043, 1195
VneI GTGCAC 2 cut(s) 1029, 1752
VpaK11BI GGWCC 4 cut(s) 335, 373, 851, 1816
VspI ATTAAT 1 cut(s) 720
XapI RAATTY 2 cut(s) 1351, 2652
XceI RCATGY 3 cut(s) 164, 261, 595
XmaI CCCGGG 1 cut(s) 2743
XspI CTAG 6 cut(s) 9, 209, 290, 612, 1613, 2540
ZraI GACGTC 1 cut(s) 130
ZrmI AGTACT 2 cut(s) 118, 441
Zsp2I ATGCAT 1 cut(s) 2183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.