FvH4_7g14450

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
12793726 .. 12797720
3995 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g14450.t1

Sequence Viewer

Length: 2907 bp
ATGGAAGGTCGTTGTCTCAAACAGCTAGTTTATGCATATATGCTGCTTTTGCTACTACTACATATCAAGATTGGCCCATCAATGTCCCTTGAGTTCAATAATTCAGATGGTAATTACGTGAGGTGCATAGAGAGGGAAAGACAAGCACTCCTTGCTCTCAAACGAGGCTTCACTGGTCATGGCGGCGATGAAGAACTACTGTCTTCATGGGGAGGAAGAGAAGCCCAAAAGCAAGACTGTTGCAGATGGCAAGGAGTCTATTGCGACAGCAAAACCGGCCATGTTACTCAACTTCATCTTGGAGATCAATATTTGAGAGGTACGATTAGTCCTAAACTAATTGAGTTACAGCATTTAGAAGTATTGGAACTCGTATTCCGAGGGAGCAAATTTCCAACATCCATTGGTTCCCTTACCTATTTGAGGTACCTTGATCTCTTTTTTCCTGAATTCGATGGGAAGTTCCCATATCAACTAGGAAATCTTACACACTTGCAGTATTTCAAATTCATGGGAAATAGGGGTAGTAGAATAGAAGACCTCAATTGGCTCCCTTATCTTTCTTCTTTAAAATACTTGGACCTGAGTTACAGTAATCTTAGTAGCATATTTGATTGGCCGGAAACAATAAACAAGCTCCCCAATTTAAGAAATTTGTCATTGAGCTACTGTTCCCTTCCTCCTCCAGTCTTTTCCACTCTTTCTCACATAAATTCTTCCAAATCTCTTGCTAGTGTTGACCTTAGTTACAACATAGATCTCACTGCCACGACTTCAGTATTCAAATGGTTGTGCAACTACAATACCAGCCTTGTTGATATTAACCTCGTGAATAACGAGTTAAGTGGTTCAATTCCTGATGTTTTTGGAAACATGAGCTCTCTTGCACACCTTGATCTCTCATATAATATCCTTGAAGGGGCGTTCCCGCTTTCCTTTTCGAAGTTATGTAGTTTGCGATATTTGGCACTTGCAGCCAACAATCTAAGTGGACGATATTATGATATTTTTCAAATATTGTCAAACTGTGCGCAAAGCTCATTAGAGATTCTTGACCTCCAAGGGAATTATCACATTGTTGGGTGGTTGCCTAATCATACAACCTTTCCGTACCTGAAGAGATTATCTCTTTCAGGCACTGGACTGATCGGAAGAGTACCAGAAAGTATAGGACAAATGTCTAAATTGGAGTGGATCGAAATGGCCAATACTTCTTTAGAAGGGATAATTTCAGAAACTCATTTCTCACAACTGTCCAGATTGATAGCTTTGGATTTATCAGATAACTCGCTATCTTTTAACGTCCATTCTGATTGGGTTCCTCCTTTCCAATTGGAAAAAATAGCATTGAGGTCTTGCACGATGGGTCCCTCTTTTCCCCAATGGCTTCAGACGCAGAAGAAAGTATTAGACATTGATATATCTGATGCTGGAATTTCTGATAACCTTCCAAGTTGGTTCTGGGAATGGTCTCATAAGGCAACATCTATGGATCTTTCTCGCAATCAAATAAAAGGAACATTGGAACATTTGAGGTTTGAGTTCGTTTACAACCCTGAACTCAATTTGAGTTGGAACCTATTGGAAGGTCCAATCGTGTCCTCAATACTTTTCTTAAATGCAGACCTCTCTAACAATAGATTCTCAGGGCCAGCTTCTTTTTTGTGTGATCCAAGTGTCAGCAATTTAACATTTCTTGATCTCTCAAGCAACAATCTATCTGGGGAACTTCCGGATTGCTGGACACATTTAGAAAATCTAATCATTCTTGATTTGAGTAACAATACATTTTCTGGGACAATTCCAATCACAATGGGAAACTTAGTTTCGATTGAGTCATTGAAACTAGATAGCAACAAATTTGTGGGAGGATTTCCTTCCTTGGAGAATTGCACAAACTTAAGAGCTTTAGGTCTTGAAAACAATAAATTTTCAGGACCTATACCTAAGTGGTTAGGGGTTCGATTTCCTGATTTGGTCATACTTATCCTTCGATCCAATCTCTTCAATGGTAGCATTCCATCACAACTGTGTCATCTCACTAGCATTCAAATTTTGGATTTGTCAATCAATAACATCTCTGGAAGTATACCAAAATGTCTGAACAATTTGACTGCTATGGCTAAAGGTGGAGATCTAATTGATTTAACGATCAGTTACGAGTACAAACTTAATAATGGACCAAGTCTTAGCTATGATGGTGAAAACAATGAATACCTTTTCTATGTTGCTAGGATTTATGATGATGAAATGACCATCACATGGAAAGGAACATTGTCCAGGTACGGAAGTACTCTGGGACTTGTAAAGAGTATTGATATCTCGAGCAACAAGTTGACAGGAGAAATTCCCAGTGAAATCACTCGTCTTGTTGGGCTGGTTTCTCTTAACTTGTCAAGAAACTATTTAACAGGTCAAATAGCTCATGATATTGGAAAGCTGCAGTCATTGGATTCCCTTGATTTATCCAGAAACCTATTACATGGCTCAATTCCAACAAGTCTTTTTCAGATATATGGTCTTGGCTATTTGGACTTGTCATACAACAACCTTTCTGGAAAGATTCCAATGGGTTCTCAACTCCAAAACTACGATGCCTCGTATTTTGCTGGAAATCCTCAGCTTTGTGGACTTCCACTTGAGAGGTCGTGTTCTCTAGATACTGAATCCAGTCCACGACAAGTCGAGAACCCTGGAACTGAAGAAGAAGAAGATGGACTCAGCACACAAGGATTCTACATCAGTGTAGGGCTTGGATTTTTTGTTGGATTTTGGGGCGTTTGTGGCAGTTTGATTATCAATAAGTCATGGAGATATGCATACTACAAGTTCTTTAATCTTCTGAACGACCAACTTTATCTGAGAATCACTTTGATCATGAGGCAATTAAAGAACAGACTAGCCTAA

Protein Analysis

969

Amino Acids

108.55

Weight (kDa)

5.44

Isoelectric Point (pI)

41.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 45 - 89 5.3e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 111 - 308 1.8e-08 Leucine-rich repeat region
LRR_8 PF13855 270 - 329 9.7e-09 Leucine rich repeat
LRR_8 PF13855 561 - 621 3.2e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1032
Acc65I GGTACC 1 cut(s) 426
AccB1I GGYRCC 1 cut(s) 426
AccB7I CCANNNNNTGG 1 cut(s) 2262
AccI GTMKAC 1 cut(s) 2089
AccIII TCCGGA 1 cut(s) 1732
AciI CCGC 2 cut(s) 183, 929
AclWI GGATC 4 cut(s) 1202, 1500, 1664, 1989
AcoI YGGCCR 3 cut(s) 277, 617, 1203
AcuI CTGAAG 4 cut(s) 759, 1136, 1373, 2721
AfaI GTAC 7 cut(s) 322, 428, 1112, 1158, 2165, 2285, 2293
AfiI CCNNNNNNNGG 3 cut(s) 423, 919, 2262
AflII CTTAAG 1 cut(s) 1900
AjnI CCWGG 2 cut(s) 2279, 2692
AleI CACNNNNGTG 1 cut(s) 2029
AloI GAACNNNNNNTCC 2 cut(s) 360, 392
Alw21I GWGCWC 1 cut(s) 881
Alw26I GTCTC 2 cut(s) 20, 1476
AlwI GGATC 4 cut(s) 1202, 1500, 1664, 1989
AlwNI CAGNNNCTG 1 cut(s) 1139
Ama87I CYCGRG 1 cut(s) 2323
Aor13HI TCCGGA 1 cut(s) 1732
AoxI GGCC 5 cut(s) 73, 277, 617, 1203, 1649
ApeKI GCWGC 3 cut(s) 43, 974, 2440
Asp718I GGTACC 1 cut(s) 426
AspLEI GCGC 1 cut(s) 1033
AspS9I GGNCC 7 cut(s) 74, 580, 1367, 1589, 1649, 1937, 2180
AsuHPI GGTGA 1 cut(s) 2213
AsuII TTCGAA 1 cut(s) 941
AvaI CYCGRG 1 cut(s) 2323
AvaII GGWCC 5 cut(s) 580, 1367, 1589, 1937, 2180
BaeI ACNNNNGTAYC 2 cut(s) 2275, 2308
BalI TGGCCA 1 cut(s) 1205
BanI GGYRCC 1 cut(s) 426
BanII GRGCYC 1 cut(s) 881
BauI CACGAG 1 cut(s) 827
BbsI GAAGAC 2 cut(s) 195, 543
Bbv12I GWGCWC 1 cut(s) 881
BbvCI CCTCAGC 1 cut(s) 2619
BbvI GCAGC 3 cut(s) 30, 986, 2427
BccI CCATC 9 cut(s) 85, 101, 240, 449, 1357, 2029, 2192, 2264, 2708
BciT130I CCWGG 2 cut(s) 2281, 2694
BclI TGATCA 1 cut(s) 2874
BcoDI GTCTC 2 cut(s) 20, 1476
BfaI CTAG 8 cut(s) 26, 476, 732, 1847, 2043, 2232, 2657, 2900
BfmI CTRYAG 1 cut(s) 2441
BfrI CTTAAG 1 cut(s) 1900
BglII AGATCT 2 cut(s) 757, 2134
BisI GCNGC 4 cut(s) 44, 184, 975, 2441
BlsI GCNGC 4 cut(s) 45, 185, 976, 2442
BmcAI AGTACT 1 cut(s) 2293
Bme1390I CCNGG 2 cut(s) 2281, 2694
Bme18I GGWCC 5 cut(s) 580, 1367, 1589, 1937, 2180
BmeT110I CYCGRG 1 cut(s) 2323
BmgT120I GGNCC 7 cut(s) 74, 580, 1367, 1589, 1649, 1937, 2180
BmiI GGNNCC 7 cut(s) 409, 428, 551, 1320, 1368, 1369, 1577
BmrFI CCNGG 2 cut(s) 2281, 2694
BmrI ACTGGG 1 cut(s) 2346
BmsI GCATC 2 cut(s) 1417, 2584
BmuI ACTGGG 1 cut(s) 2346
BoxI GACNNNNGTC 1 cut(s) 1177
BpiI GAAGAC 2 cut(s) 195, 543
BplI GAGNNNNNCTC 2 cut(s) 1111, 1143
BpmI CTGGAG 1 cut(s) 669
Bpu10I CCTNAGC 1 cut(s) 2619
Bpu14I TTCGAA 1 cut(s) 941
BpuEI CTTGAG 3 cut(s) 110, 1690, 2660
BsaAI YACGTR 1 cut(s) 118
BsaI GGTCTC 1 cut(s) 1476
BsaJI CCNNGG 4 cut(s) 379, 1060, 1881, 2692
BsaWI WCCGGW 1 cut(s) 1732
BsaXI ACNNNNNCTCC 2 cut(s) 132, 162
Bsc4I CCNNNNNNNGG 3 cut(s) 423, 919, 2262
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 5 cut(s) 178, 686, 1144, 2352, 2670
BseAI TCCGGA 1 cut(s) 1732
BseBI CCWGG 2 cut(s) 2281, 2694
BseDI CCNNGG 4 cut(s) 379, 1060, 1881, 2692
BseGI GGATG 1 cut(s) 398
BseLI CCNNNNNNNGG 3 cut(s) 423, 919, 2262
BseMII CTCAG 5 cut(s) 575, 1659, 2633, 2734, 2852
BseNI ACTGG 5 cut(s) 178, 686, 1144, 2352, 2670
BseRI GAGGAG 1 cut(s) 672
BseXI GCAGC 3 cut(s) 30, 986, 2427
BshFI GGCC 5 cut(s) 75, 279, 619, 1205, 1651
BshNI GGYRCC 1 cut(s) 426
BsiHKAI GWGCWC 1 cut(s) 881
BsiHKCI CYCGRG 1 cut(s) 2323
BsiSI CCGG 3 cut(s) 276, 620, 1733
BslFI GGGAC 4 cut(s) 70, 1353, 1810, 2313
BslI CCNNNNNNNGG 3 cut(s) 423, 919, 2262
BsmAI GTCTC 2 cut(s) 20, 1476
BsmFI GGGAC 4 cut(s) 70, 1353, 1810, 2313
BsmI GAATGC 2 cut(s) 2016, 2046
BsnI GGCC 5 cut(s) 75, 279, 619, 1205, 1651
Bso31I GGTCTC 1 cut(s) 1476
BsoBI CYCGRG 1 cut(s) 2323
Bsp119I TTCGAA 1 cut(s) 941
Bsp1286I GDGCHC 1 cut(s) 881
Bsp13I TCCGGA 1 cut(s) 1732
BspACI CCGC 2 cut(s) 183, 929
BspANI GGCC 5 cut(s) 75, 279, 619, 1205, 1651
BspCNI CTCAG 5 cut(s) 576, 1658, 2632, 2733, 2853
BspEI TCCGGA 1 cut(s) 1732
BspHI TCATGA 2 cut(s) 2425, 2877
BspLI GGNNCC 7 cut(s) 409, 428, 551, 1320, 1368, 1369, 1577
BspMAI CTGCAG 1 cut(s) 2445
BspPI GGATC 4 cut(s) 1202, 1500, 1664, 1989
BspT104I TTCGAA 1 cut(s) 941
BspT107I GGYRCC 1 cut(s) 426
BspTI CTTAAG 1 cut(s) 1900
BspTNI GGTCTC 1 cut(s) 1476
BsrFI RCCGGY 1 cut(s) 275
BsrI ACTGG 5 cut(s) 178, 686, 1144, 2352, 2670
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 4 cut(s) 379, 1060, 1881, 2692
BssNAI GTATAC 1 cut(s) 2090
BssSI CACGAG 1 cut(s) 827
BssT1I CCWWGG 2 cut(s) 1060, 1881
Bst1107I GTATAC 1 cut(s) 2090
Bst2BI CACGAG 1 cut(s) 827
Bst2UI CCWGG 2 cut(s) 2281, 2694
Bst4CI ACNGT 7 cut(s) 201, 239, 593, 671, 1028, 1254, 2031
Bst6I CTCTTC 4 cut(s) 211, 1112, 1147, 2009
BstAFI CTTAAG 1 cut(s) 1900
BstAPI GCANNNNNTGC 1 cut(s) 152
BstBAI YACGTR 1 cut(s) 118
BstBI TTCGAA 1 cut(s) 941
BstC8I GCNNGC 1 cut(s) 1653
BstENI CCTNNNNNAGG 1 cut(s) 421
BstF5I GGATG 1 cut(s) 398
BstHHI GCGC 1 cut(s) 1033
BstMAI GTCTC 2 cut(s) 20, 1476
BstMWI GCNNNNNNNGC 6 cut(s) 49, 152, 276, 974, 1393, 2784
BstNI CCWGG 2 cut(s) 2281, 2694
BstPAI GACNNNNGTC 1 cut(s) 1177
BstSCI CCNGG 2 cut(s) 2279, 2692
BstSFI CTRYAG 1 cut(s) 2441
BstV1I GCAGC 3 cut(s) 30, 986, 2427
BstV2I GAAGAC 2 cut(s) 195, 543
BstX2I RGATCY 3 cut(s) 757, 1492, 2134
BstYI RGATCY 3 cut(s) 757, 1492, 2134
BstZ17I GTATAC 1 cut(s) 2090
BsuRI GGCC 5 cut(s) 75, 279, 619, 1205, 1651
BtgZI GCGATG 1 cut(s) 201
BtsCI GGATG 1 cut(s) 398
BtsI GCAGTG 1 cut(s) 762
BtsIMutI CAGTG 5 cut(s) 171, 762, 1137, 2359, 2749
Cac8I GCNNGC 1 cut(s) 1653
CaiI CAGNNNCTG 1 cut(s) 1139
CciI TCATGA 2 cut(s) 2425, 2877
CfoI GCGC 1 cut(s) 1033
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 7 cut(s) 74, 580, 1367, 1589, 1649, 1937, 2180
CseI GACGC 1 cut(s) 1402
Csp6I GTAC 7 cut(s) 321, 427, 1111, 1157, 2164, 2284, 2292
CspCI CAANNNNNGTGG 2 cut(s) 970, 1005
CviQI GTAC 7 cut(s) 321, 427, 1111, 1157, 2164, 2284, 2292
DraI TTTAAA 1 cut(s) 570
EaeI YGGCCR 3 cut(s) 277, 617, 1203
Eam1104I CTCTTC 4 cut(s) 211, 1112, 1147, 2009
EarI CTCTTC 4 cut(s) 211, 1112, 1147, 2009
Ecl136II GAGCTC 1 cut(s) 879
Eco130I CCWWGG 2 cut(s) 1060, 1881
Eco24I GRGCYC 1 cut(s) 881
Eco31I GGTCTC 1 cut(s) 1476
Eco32I GATATC 1 cut(s) 2320
Eco47I GGWCC 5 cut(s) 580, 1367, 1589, 1937, 2180
Eco53kI GAGCTC 1 cut(s) 879
Eco57I CTGAAG 4 cut(s) 759, 1136, 1373, 2721
Eco88I CYCGRG 1 cut(s) 2323
EcoICRI GAGCTC 1 cut(s) 879
EcoNI CCTNNNNNAGG 1 cut(s) 421
EcoO109I RGGNCCY 2 cut(s) 1367, 1937
EcoRI GAATTC 1 cut(s) 449
EcoRII CCWGG 2 cut(s) 2279, 2692
EcoRV GATATC 1 cut(s) 2320
EcoT14I CCWWGG 2 cut(s) 1060, 1881
EcoT22I ATGCAT 2 cut(s) 37, 2821
EcoT38I GRGCYC 1 cut(s) 881
ErhI CCWWGG 2 cut(s) 1060, 1881
FalI AAGNNNNNCTT 2 cut(s) 135, 167
FaqI GGGAC 4 cut(s) 70, 1353, 1810, 2313
FauI CCCGC 1 cut(s) 936
FbaI TGATCA 1 cut(s) 2874
FblI GTMKAC 1 cut(s) 2089
Fnu4HI GCNGC 4 cut(s) 44, 184, 975, 2441
FokI GGATG 1 cut(s) 385
FriOI GRGCYC 1 cut(s) 881
Fsp4HI GCNGC 4 cut(s) 44, 184, 975, 2441
FspBI CTAG 8 cut(s) 26, 476, 732, 1847, 2043, 2232, 2657, 2900
FspI TGCGCA 1 cut(s) 1032
GlaI GCGC 1 cut(s) 1032
GluI GCNGC 4 cut(s) 44, 184, 975, 2441
GsuI CTGGAG 1 cut(s) 669
HaeIII GGCC 5 cut(s) 75, 279, 619, 1205, 1651
HapII CCGG 3 cut(s) 276, 620, 1733
HgaI GACGC 1 cut(s) 1402
HhaI GCGC 1 cut(s) 1033
Hin6I GCGC 1 cut(s) 1031
HinP1I GCGC 1 cut(s) 1031
HincII GTYRAC 2 cut(s) 739, 2337
HindII GTYRAC 2 cut(s) 739, 2337
HpaII CCGG 3 cut(s) 276, 620, 1733
HphI GGTGA 1 cut(s) 2213
Hpy166II GTNNAC 7 cut(s) 739, 992, 1549, 2090, 2337, 2630, 2675
Hpy8I GTNNAC 7 cut(s) 739, 992, 1549, 2090, 2337, 2630, 2675
HpyAV CCTTC 7 cut(s) 686, 911, 1214, 1457, 1580, 1887, 2000
HpyCH4III ACNGT 7 cut(s) 201, 239, 593, 671, 1028, 1254, 2031
HpyCH4IV ACGT 2 cut(s) 117, 1302
HpyF10VI GCNNNNNNNGC 6 cut(s) 49, 152, 276, 974, 1393, 2784
HpySE526I ACGT 2 cut(s) 117, 1302
HspAI GCGC 1 cut(s) 1031
KflI GGGWCCC 1 cut(s) 1367
Kpn2I TCCGGA 1 cut(s) 1732
KpnI GGTACC 1 cut(s) 430
Ksp22I TGATCA 1 cut(s) 2874
LmnI GCTCC 3 cut(s) 384, 555, 642
Lsp1109I GCAGC 3 cut(s) 30, 986, 2427
LweI GCATC 2 cut(s) 1417, 2584
MaeI CTAG 8 cut(s) 26, 476, 732, 1847, 2043, 2232, 2657, 2900
MaeII ACGT 2 cut(s) 117, 1302
MaeIII GTNAC 6 cut(s) 283, 345, 587, 746, 1778, 2156
MfeI CAATTG 2 cut(s) 544, 1331
MflI RGATCY 3 cut(s) 757, 1492, 2134
MhlI GDGCHC 1 cut(s) 881
MlsI TGGCCA 1 cut(s) 1205
MluNI TGGCCA 1 cut(s) 1205
MlyI GAGTC 3 cut(s) 264, 1844, 2712
MmeI TCCRAC 4 cut(s) 419, 1553, 2519, 2746
Mox20I TGGCCA 1 cut(s) 1205
Mph1103I ATGCAT 2 cut(s) 37, 2821
MroI TCCGGA 1 cut(s) 1732
MscI TGGCCA 1 cut(s) 1205
MslI CAYNNNNRTG 1 cut(s) 2029
Msp20I TGGCCA 1 cut(s) 1205
MspCI CTTAAG 1 cut(s) 1900
MspI CCGG 3 cut(s) 276, 620, 1733
MspR9I CCNGG 2 cut(s) 2281, 2694
MunI CAATTG 2 cut(s) 544, 1331
Mva1269I GAATGC 2 cut(s) 2016, 2046
MvaI CCWGG 2 cut(s) 2281, 2694
MwoI GCNNNNNNNGC 6 cut(s) 49, 152, 276, 974, 1393, 2784
NlaIV GGNNCC 7 cut(s) 409, 428, 551, 1320, 1368, 1369, 1577
NsbI TGCGCA 1 cut(s) 1032
NsiI ATGCAT 2 cut(s) 37, 2821
NspV TTCGAA 1 cut(s) 941
OliI CACNNNNGTG 1 cut(s) 2029
PaeR7I CTCGAG 1 cut(s) 2323
PagI TCATGA 2 cut(s) 2425, 2877
PcsI WCGNNNNNNNCGW 1 cut(s) 834
PctI GAATGC 2 cut(s) 2016, 2046
PfeI GAWTC 7 cut(s) 1048, 1641, 2453, 2563, 2666, 2733, 2865
PflFI GACNNNGTC 1 cut(s) 2184
PflMI CCANNNNNTGG 1 cut(s) 2262
PkrI GCNGC 4 cut(s) 45, 185, 976, 2442
PleI GAGTC 3 cut(s) 263, 1843, 2712
PpsI GAGTC 3 cut(s) 263, 1843, 2712
Ppu21I YACGTR 1 cut(s) 118
PpuMI RGGWCCY 2 cut(s) 1367, 1937
PshAI GACNNNNGTC 1 cut(s) 1177
Psp124BI GAGCTC 1 cut(s) 881
Psp5II RGGWCCY 2 cut(s) 1367, 1937
Psp6I CCWGG 2 cut(s) 2279, 2692
PspGI CCWGG 2 cut(s) 2279, 2692
PspN4I GGNNCC 7 cut(s) 409, 428, 551, 1320, 1368, 1369, 1577
PspPI GGNCC 7 cut(s) 74, 580, 1367, 1589, 1649, 1937, 2180
PspPPI RGGWCCY 2 cut(s) 1367, 1937
PstI CTGCAG 1 cut(s) 2445
PstNI CAGNNNCTG 1 cut(s) 1139
PsuI RGATCY 3 cut(s) 757, 1492, 2134
PsyI GACNNNGTC 1 cut(s) 2184
RsaI GTAC 7 cut(s) 322, 428, 1112, 1158, 2165, 2285, 2293
RsaNI GTAC 7 cut(s) 321, 427, 1111, 1157, 2164, 2284, 2292
RseI CAYNNNNRTG 1 cut(s) 2029
SacI GAGCTC 1 cut(s) 881
SatI GCNGC 4 cut(s) 44, 184, 975, 2441
Sau96I GGNCC 7 cut(s) 74, 580, 1367, 1589, 1649, 1937, 2180
ScaI AGTACT 1 cut(s) 2293
SchI GAGTC 3 cut(s) 264, 1844, 2712
ScrFI CCNGG 2 cut(s) 2281, 2694
SduI GDGCHC 1 cut(s) 881
SfaNI GCATC 2 cut(s) 1417, 2584
SfcI CTRYAG 1 cut(s) 2441
Sfr274I CTCGAG 1 cut(s) 2323
SfuI TTCGAA 1 cut(s) 941
SinI GGWCC 5 cut(s) 580, 1367, 1589, 1937, 2180
SlaI CTCGAG 1 cut(s) 2323
SmiMI CAYNNNNRTG 1 cut(s) 2029
SmlI CTYRAG 5 cut(s) 89, 1705, 1900, 2323, 2639
SmoI CTYRAG 5 cut(s) 89, 1705, 1900, 2323, 2639
SsiI CCGC 2 cut(s) 183, 929
SspI AATATT 2 cut(s) 311, 1017
SspMI CTAG 8 cut(s) 26, 476, 732, 1847, 2043, 2232, 2657, 2900
SstI GAGCTC 1 cut(s) 881
StyD4I CCNGG 2 cut(s) 2279, 2692
StyI CCWWGG 2 cut(s) 1060, 1881
TaaI ACNGT 7 cut(s) 201, 239, 593, 671, 1028, 1254, 2031
TaiI ACGT 2 cut(s) 120, 1305
TaqI TCGA 8 cut(s) 453, 941, 1197, 1829, 1963, 1993, 2324, 2685
TatI WGTACW 2 cut(s) 2163, 2291
TauI GCSGC 1 cut(s) 186
TfiI GAWTC 7 cut(s) 1048, 1641, 2453, 2563, 2666, 2733, 2865
TscAI CASTG 5 cut(s) 178, 769, 1144, 2359, 2749
TseI GCWGC 3 cut(s) 43, 974, 2440
TspDTI ATGAA 6 cut(s) 195, 204, 284, 499, 2226, 2262
TspGWI ACGGA 2 cut(s) 1098, 2301
TspRI CASTG 5 cut(s) 178, 769, 1144, 2359, 2749
Tth111I GACNNNGTC 1 cut(s) 2184
Van91I CCANNNNNTGG 1 cut(s) 2262
Vha464I CTTAAG 1 cut(s) 1900
VpaK11BI GGWCC 5 cut(s) 580, 1367, 1589, 1937, 2180
XagI CCTNNNNNAGG 1 cut(s) 421
XbaI TCTAGA 1 cut(s) 2656
XcmI CCANNNNNNNNNTGG 1 cut(s) 1458
XhoI CTCGAG 1 cut(s) 2323
XmiI GTMKAC 1 cut(s) 2089
XspI CTAG 8 cut(s) 26, 476, 732, 1847, 2043, 2232, 2657, 2900
ZrmI AGTACT 1 cut(s) 2293
Zsp2I ATGCAT 2 cut(s) 37, 2821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.