Rw7G019160

Leucine Rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000028
Physical Location & Seq
Reverse (-)
21038637 .. 21041895
3259 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019160.1

Sequence Viewer

Length: 3060 bp
ATGAAGCAACTCCATTGCTGTTTCCACGATTATACATGTGTAGTTTCCAAAATCCTTTTGCTTCAACTATATATTACTTCACTTTGGTTTGGTTGCAATATCATCTTCATAATCATGTTTTTCAGTATAATGAGTGGTAGGTCTATGCATTCTGTTTTGGTTGGGCTTGTGTGCCTGGCCATTGCCTCTGCTGTTTGTTGTTCTAGTGTTGGAAGCTCCAACAACATCATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGACTCCAATGCTCTTGCCTCTTGGAAAAGTGAGAAAGATTGCTGCAAGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTTATCACTCTAGATCTCTCTTATAGTTATGATGCTAATCTCGATTCCACTGAATTGAGCGGTGAAATTAGTCCTTCACTACTTGAATTGCCATATCTAAATTACTTGGACCTCAGTTATATTGATTTTGGAGAAAATATGATTCCTAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGCATATGCTAATTTCAGTGGATCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAAACTTGCAGATGCTAATTTCAGTGGACATGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTACCGTAACGAAGTTGTTAGTCCTGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCAGAAGTAGATTTGTCAAAGGTTACGAATTGGCCACAATCTTTAAGCAAGCTCAGTTCGCTGACCGAGCTTCAGTTATCTTCCTGTCATCTTCCTGATGTCAATCTAAGATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAAATTCTTCACCTCTCTGAGAACTCTCTGCTTAATTCTTCAATATTTTATTGGATTGCCAATGTCAGCAGCAACTTTGTCCATATTGATCTCTCTTCCAACAATCTTGAAGGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTACATCTGTATTGGAATCAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTATGGCACAACCAATTGTCTGAAAACATTGAGAACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGAGACCTTGGACTTGAGTGATAACCAGTTTTGGGGGTACTGGCCAGATTTGTCACGTTTTTCAAAGTTAAGAGTGTTATATCTTGACGGGAATCAACTAAATGGGTCTGTACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGAATCATTATTTCTCTCCAGGAATTTTTTGAGTGGTGTCATAACACAAGCCCACTTTTTGAACCTCTCTCGTTTACGGGCTTTGAGTATTTCTGGTAATCGTTTCTCTATCAACCTGAGCTCTGATTGGAATCCACCATTTCAACTTACTAGTATGTTAGACATGTCCTCTTGCAAGCTGGGCCCAGCTATTCCCAAGTGGATTCTAAGGCAGACAAATCTTACTGGGCTTGGTCTCTCTAATGCTGGTCTATCAGGATCATTACCTAATAAGTTTTGGGATCTATTTTCTGGCTTATCTCGCTTAGATCTCTCTATGAACCAAATCCATGGAAAACTACCGAATCTGTCATCGACAAGCTTGCTTTCTCTCAACTTGTCTTATAATCTATTTTCTGGCGCATTGCCATCATTTTCTCCTATGCTCTGGGAATTGTATCTCTCGAATAACATGTTTTCTGAGCCGTTGTCTTCCTTATGTGCAACGCGGGCTCCAGATTTAAGGTTTGTTGACATTTCTAAGAACCTATTGTCTGGGGAGCTTCCTAATTGTTGGATGCAATTTCAAAATTTGATTTCGTTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTCGTTAGGCAATCTACAGAGAATTATGATATTGCGTTTGCATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCGAATTATTGATGGTTGACCTTGGCAACAATAACTTGTCGGGAAAGATACCAACATGGATTGGCCAAAGTCTAACAAACTTGGCACTTCTAGGCTTACGGTCCAATGAGTTCAATGGAATCATACCCTTCTCCCTGTGCAGTCTAGCTGCCATTCATGTTTTGGACCTCTCTCACAACAATATTTCAGGAAGCTTGCCGCATTGCTTGAATAACATAACCGCTTTGGCTCATGATTCTATTGATGCTTTTTTCAATTTAGAACTTGAACTCGTGTGGAAAGGAATAGAAATTGAGTTTGGGAAAAATCTTGCTGGTATGAGAAGCATTGACATGTCAAACAACTGTTTGGTAGGGGAAATTCCGCAAAGTATAGCTATAATGACAGAGTTGATTTCTCTGAACCTGTCTAGAAACAAATTGACGGGAAAGCTTCCTGAAAACTTTGGTAACATGAAGAAGTTGGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTAAAATTCCGACAAGTTTTGCGAGCTTAAATTTTCTTAGTTTCTTGGACTTATCACACAACAACTTGTCAGGAAGAATTCCATTAGGCACCCAACTTCAGAGTTTTAATACTTCTAAATATATGGGAAATCTTGGACTTTGTGGACCACCGTTGACACAAAGTTGTCCAGGAGATGGAACAGTTCAAGATGATGGAATCACGAGAGGCACCAAAACTGTTGATGATGGTCTCATTAGCCTGGGATTCTTTATCAGTGCAGTGCTGGGATTCGTCACTGGATTTTGGATGGTCTACGGCAGTTTACTGCTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGCATTTATGTCAAAACCAAGGCAAAAGTGCGGAGGACACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1019

Amino Acids

112.87

Weight (kDa)

5.95

Isoelectric Point (pI)

38.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 80 - 118 8.6e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 144 - 363 3.8e-20 Leucine-rich repeat region
LRR_8 PF13855 360 - 416 2.1e-06 Leucine rich repeat
LRR_8 PF13855 433 - 489 1.8e-06 Leucine rich repeat
LRR_8 PF13855 456 - 516 4.9e-08 Leucine rich repeat
LRR_8 PF13855 847 - 905 9.6e-11 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1827
AccB1I GGYRCC 2 cut(s) 2735, 2855
AccB7I CCANNNNNTGG 1 cut(s) 2822
AccBSI CCGCTC 1 cut(s) 429
AccI GTMKAC 1 cut(s) 2940
AccII CGCG 1 cut(s) 1930
AciI CCGC 6 cut(s) 429, 1930, 2348, 2370, 2513, 3040
AclWI GGATC 3 cut(s) 586, 1708, 1731
AcoI YGGCCR 4 cut(s) 177, 884, 1343, 2212
AcsI RAATTY 9 cut(s) 665, 999, 1465, 2011, 2026, 2508, 2652, 2677, 2724
AcuI CTGAAG 2 cut(s) 908, 2729
AfaI GTAC 3 cut(s) 1340, 1413, 2149
AfiI CCNNNNNNNGG 4 cut(s) 596, 743, 1333, 2822
AflII CTTAAG 1 cut(s) 2957
AflIII ACRYGT 6 cut(s) 35, 727, 849, 1605, 1893, 2481
AhlI ACTAGT 1 cut(s) 1592
AjnI CCWGG 5 cut(s) 174, 1460, 2815, 2886, 2991
AjuI GAANNNNNNNTTGG 2 cut(s) 2430, 2462
Alw21I GWGCWC 1 cut(s) 1565
Alw26I GTCTC 3 cut(s) 1298, 1682, 2882
AlwI GGATC 3 cut(s) 586, 1708, 1731
Ama87I CYCGRG 1 cut(s) 1415
AoxI GGCC 6 cut(s) 177, 274, 884, 1343, 1624, 2212
ApaI GGGCCC 1 cut(s) 1628
ApeKI GCWGC 4 cut(s) 327, 1065, 1212, 2297
ApoI RAATTY 9 cut(s) 665, 999, 1465, 2011, 2026, 2508, 2652, 2677, 2724
AseI ATTAAT 1 cut(s) 978
AspLEI GCGC 1 cut(s) 1844
AspS9I GGNCC 7 cut(s) 478, 1109, 1624, 1625, 2250, 2314, 2792
AsuHPI GGTGA 2 cut(s) 443, 998
AvaI CYCGRG 1 cut(s) 1415
AvaII GGWCC 5 cut(s) 478, 1109, 2250, 2314, 2792
BaeGI GKGCMC 1 cut(s) 1628
BalI TGGCCA 4 cut(s) 179, 886, 1345, 2214
BanI GGYRCC 2 cut(s) 2735, 2855
BanII GRGCYC 3 cut(s) 1565, 1628, 1936
BarI GAAGNNNNNNTAC 2 cut(s) 1170, 1202
BauI CACGAG 2 cut(s) 2420, 2848
BbsI GAAGAC 2 cut(s) 1117, 1905
Bbv12I GWGCWC 1 cut(s) 1565
BbvI GCAGC 4 cut(s) 314, 1077, 1224, 2284
BccI CCATC 7 cut(s) 1121, 1858, 2155, 2816, 2834, 2867, 2929
BceAI ACGGC 2 cut(s) 1891, 2959
BcgI CGANNNNNNTGC 2 cut(s) 1786, 1820
BciT130I CCWGG 5 cut(s) 176, 1462, 2817, 2888, 2993
BciVI GTATCC 1 cut(s) 1179
BcoDI GTCTC 3 cut(s) 1298, 1682, 2882
BcuI ACTAGT 1 cut(s) 1592
BfaI CTAG 8 cut(s) 204, 380, 1145, 1437, 1593, 2240, 2294, 2559
BfmI CTRYAG 1 cut(s) 2078
BfrI CTTAAG 1 cut(s) 2957
BfuI GTATCC 1 cut(s) 1179
BglII AGATCT 2 cut(s) 382, 1750
BisI GCNGC 5 cut(s) 328, 1066, 1213, 2298, 2348
BlsI GCNGC 5 cut(s) 329, 1067, 1214, 2299, 2349
Bme1390I CCNGG 5 cut(s) 176, 1462, 2817, 2888, 2993
Bme18I GGWCC 5 cut(s) 478, 1109, 2250, 2314, 2792
BmeT110I CYCGRG 1 cut(s) 1415
BmgT120I GGNCC 7 cut(s) 478, 1109, 1624, 1625, 2250, 2314, 2792
BmiI GGNNCC 5 cut(s) 1111, 1626, 1935, 2737, 2857
BmrFI CCNGG 5 cut(s) 176, 1462, 2817, 2888, 2993
BmrI ACTGGG 1 cut(s) 1677
BmsI GCATC 4 cut(s) 391, 700, 1989, 2383
BmuI ACTGGG 1 cut(s) 1677
BpiI GAAGAC 2 cut(s) 1117, 1905
BpmI CTGGAG 3 cut(s) 245, 1444, 1920
Bpu10I CCTNAGC 1 cut(s) 1559
BpuEI CTTGAG 4 cut(s) 830, 856, 1322, 1336
BsaBI GATNNNNATC 3 cut(s) 405, 954, 1572
BsaI GGTCTC 3 cut(s) 1298, 1682, 2882
BsaJI CCNNGG 5 cut(s) 1308, 1771, 2170, 2887, 3027
BsaXI ACNNNNNCTCC 2 cut(s) 1918, 1948
Bsc4I CCNNNNNNNGG 4 cut(s) 596, 743, 1333, 2822
Bse1I ACTGG 5 cut(s) 262, 1327, 1346, 1672, 2929
Bse3DI GCAATG 4 cut(s) 13, 180, 1844, 2350
Bse8I GATNNNNATC 3 cut(s) 405, 954, 1572
BseBI CCWGG 5 cut(s) 176, 1462, 2817, 2888, 2993
BseDI CCNNGG 5 cut(s) 1308, 1771, 2170, 2887, 3027
BseGI GGATG 4 cut(s) 289, 1113, 2004, 2940
BseJI GATNNNNATC 3 cut(s) 405, 954, 1572
BseLI CCNNNNNNNGG 4 cut(s) 596, 743, 1333, 2822
BseMI GCAATG 4 cut(s) 13, 180, 1844, 2350
BseMII CTCAG 7 cut(s) 496, 671, 919, 1005, 1281, 1550, 1893
BseNI ACTGG 5 cut(s) 262, 1327, 1346, 1672, 2929
BseSI GKGCMC 1 cut(s) 1628
BseXI GCAGC 4 cut(s) 314, 1077, 1224, 2284
BseYI CCCAGC 3 cut(s) 1621, 1627, 2911
BsgI GTGCAG 2 cut(s) 2308, 2925
Bsh1236I CGCG 1 cut(s) 1930
BshFI GGCC 6 cut(s) 179, 276, 886, 1345, 1626, 2214
BshNI GGYRCC 2 cut(s) 2735, 2855
BsiHKAI GWGCWC 1 cut(s) 1565
BsiHKCI CYCGRG 1 cut(s) 1415
BslFI GGGAC 1 cut(s) 1095
BslI CCNNNNNNNGG 4 cut(s) 596, 743, 1333, 2822
BsmAI GTCTC 3 cut(s) 1298, 1682, 2882
BsmFI GGGAC 1 cut(s) 1095
BsmI GAATGC 1 cut(s) 148
BsnI GGCC 6 cut(s) 179, 276, 886, 1345, 1626, 2214
Bso31I GGTCTC 3 cut(s) 1298, 1682, 2882
BsoBI CYCGRG 1 cut(s) 1415
Bsp120I GGGCCC 1 cut(s) 1624
Bsp1286I GDGCHC 3 cut(s) 1565, 1628, 1936
Bsp143I GATC 9 cut(s) 382, 578, 625, 772, 962, 1084, 1700, 1723, 1750
Bsp19I CCATGG 1 cut(s) 1771
BspACI CCGC 6 cut(s) 429, 1930, 2348, 2370, 2513, 3040
BspANI GGCC 6 cut(s) 179, 276, 886, 1345, 1626, 2214
BspCNI CTCAG 7 cut(s) 495, 672, 918, 1006, 1282, 1551, 1894
BspFNI CGCG 1 cut(s) 1930
BspHI TCATGA 1 cut(s) 2380
BspLI GGNNCC 5 cut(s) 1111, 1626, 1935, 2737, 2857
BspPI GGATC 3 cut(s) 586, 1708, 1731
BspQI GCTCTTC 1 cut(s) 261
BspT107I GGYRCC 2 cut(s) 2735, 2855
BspTI CTTAAG 1 cut(s) 2957
BspTNI GGTCTC 3 cut(s) 1298, 1682, 2882
BsrBI CCGCTC 1 cut(s) 429
BsrDI GCAATG 4 cut(s) 13, 180, 1844, 2350
BsrI ACTGG 5 cut(s) 262, 1327, 1346, 1672, 2929
BssECI CCNNGG 5 cut(s) 1308, 1771, 2170, 2887, 3027
BssMI GATC 9 cut(s) 382, 578, 625, 772, 962, 1084, 1700, 1723, 1750
BssSI CACGAG 2 cut(s) 2420, 2848
BssT1I CCWWGG 4 cut(s) 1308, 1771, 2170, 3027
Bst2BI CACGAG 2 cut(s) 2420, 2848
Bst2UI CCWGG 5 cut(s) 176, 1462, 2817, 2888, 2993
Bst4CI ACNGT 7 cut(s) 782, 2147, 2250, 2495, 2799, 2830, 2866
Bst6I CTCTTC 3 cut(s) 261, 999, 1096
BstAFI CTTAAG 1 cut(s) 2957
BstC8I GCNNGC 9 cut(s) 252, 349, 902, 1136, 1619, 1805, 1932, 2345, 2671
BstDSI CCRYGG 1 cut(s) 1771
BstF5I GGATG 4 cut(s) 289, 1113, 2004, 2940
BstFNI CGCG 1 cut(s) 1930
BstHHI GCGC 1 cut(s) 1844
BstKTI GATC 9 cut(s) 385, 581, 628, 775, 965, 1087, 1703, 1726, 1753
BstMAI GTCTC 3 cut(s) 1298, 1682, 2882
BstMBI GATC 9 cut(s) 382, 578, 625, 772, 962, 1084, 1700, 1723, 1750
BstMWI GCNNNNNNNGC 6 cut(s) 910, 919, 1623, 1743, 1931, 2070
BstNI CCWGG 5 cut(s) 176, 1462, 2817, 2888, 2993
BstNSI RCATGY 9 cut(s) 39, 254, 351, 731, 853, 1138, 1609, 1897, 2485
BstSCI CCNGG 5 cut(s) 174, 1460, 2815, 2886, 2991
BstSFI CTRYAG 1 cut(s) 2078
BstSLI GKGCMC 1 cut(s) 1628
BstUI CGCG 1 cut(s) 1930
BstV1I GCAGC 4 cut(s) 314, 1077, 1224, 2284
BstV2I GAAGAC 2 cut(s) 1117, 1905
BstX2I RGATCY 4 cut(s) 382, 578, 1723, 1750
BstXI CCANNNNNNTGG 2 cut(s) 1772, 2645
BstYI RGATCY 4 cut(s) 382, 578, 1723, 1750
BsuI GTATCC 1 cut(s) 1179
BsuRI GGCC 6 cut(s) 179, 276, 886, 1345, 1626, 2214
BtgI CCRYGG 1 cut(s) 1771
BtsCI GGATG 4 cut(s) 289, 1113, 2004, 2940
BtsI GCAGTG 1 cut(s) 2913
BtsIMutI CAGTG 6 cut(s) 417, 580, 727, 2908, 2913, 2922
Cac8I GCNNGC 9 cut(s) 252, 349, 902, 1136, 1619, 1805, 1932, 2345, 2671
CciI TCATGA 1 cut(s) 2380
CfoI GCGC 1 cut(s) 1844
Cfr13I GGNCC 7 cut(s) 478, 1109, 1624, 1625, 2250, 2314, 2792
Csp6I GTAC 3 cut(s) 1339, 1412, 2148
CviQI GTAC 3 cut(s) 1339, 1412, 2148
DpnI GATC 9 cut(s) 384, 580, 627, 774, 964, 1086, 1702, 1725, 1752
DpnII GATC 9 cut(s) 382, 578, 625, 772, 962, 1084, 1700, 1723, 1750
EaeI YGGCCR 4 cut(s) 177, 884, 1343, 2212
Eam1104I CTCTTC 3 cut(s) 261, 999, 1096
EarI CTCTTC 3 cut(s) 261, 999, 1096
Ecl136II GAGCTC 1 cut(s) 1563
Eco130I CCWWGG 4 cut(s) 1308, 1771, 2170, 3027
Eco147I AGGCCT 1 cut(s) 276
Eco24I GRGCYC 3 cut(s) 1565, 1628, 1936
Eco31I GGTCTC 3 cut(s) 1298, 1682, 2882
Eco32I GATATC 1 cut(s) 2643
Eco47I GGWCC 5 cut(s) 478, 1109, 2250, 2314, 2792
Eco53kI GAGCTC 1 cut(s) 1563
Eco57I CTGAAG 2 cut(s) 908, 2729
Eco88I CYCGRG 1 cut(s) 1415
EcoICRI GAGCTC 1 cut(s) 1563
EcoO109I RGGNCCY 1 cut(s) 1109
EcoRI GAATTC 1 cut(s) 2724
EcoRII CCWGG 5 cut(s) 174, 1460, 2815, 2886, 2991
EcoRV GATATC 1 cut(s) 2643
EcoT14I CCWWGG 4 cut(s) 1308, 1771, 2170, 3027
EcoT22I ATGCAT 1 cut(s) 150
EcoT38I GRGCYC 3 cut(s) 1565, 1628, 1936
ErhI CCWWGG 4 cut(s) 1308, 1771, 2170, 3027
FaqI GGGAC 1 cut(s) 1095
FauI CCCGC 1 cut(s) 1923
FauNDI CATATG 1 cut(s) 562
FblI GTMKAC 1 cut(s) 2940
Fnu4HI GCNGC 5 cut(s) 328, 1066, 1213, 2298, 2348
FokI GGATG 4 cut(s) 296, 1100, 2011, 2947
FriOI GRGCYC 3 cut(s) 1565, 1628, 1936
Fsp4HI GCNGC 5 cut(s) 328, 1066, 1213, 2298, 2348
FspBI CTAG 8 cut(s) 204, 380, 1145, 1437, 1593, 2240, 2294, 2559
GlaI GCGC 1 cut(s) 1843
GluI GCNGC 5 cut(s) 328, 1066, 1213, 2298, 2348
GsaI CCCAGC 3 cut(s) 1625, 1631, 2915
GsuI CTGGAG 3 cut(s) 245, 1444, 1920
HaeIII GGCC 6 cut(s) 179, 276, 886, 1345, 1626, 2214
HhaI GCGC 1 cut(s) 1844
Hin6I GCGC 1 cut(s) 1842
HinP1I GCGC 1 cut(s) 1842
HincII GTYRAC 4 cut(s) 1227, 1954, 2167, 2802
HindII GTYRAC 4 cut(s) 1227, 1954, 2167, 2802
HindIII AAGCTT 3 cut(s) 1801, 2341, 2579
HphI GGTGA 2 cut(s) 443, 998
Hpy166II GTNNAC 9 cut(s) 725, 1227, 1517, 1954, 2167, 2792, 2802, 2941, 2951
Hpy8I GTNNAC 9 cut(s) 725, 1227, 1517, 1954, 2167, 2792, 2802, 2941, 2951
HpyAV CCTTC 6 cut(s) 453, 641, 1100, 1172, 2142, 2287
HpyCH4III ACNGT 7 cut(s) 782, 2147, 2250, 2495, 2799, 2830, 2866
HpyCH4IV ACGT 1 cut(s) 1357
HpyF10VI GCNNNNNNNGC 6 cut(s) 910, 919, 1623, 1743, 1931, 2070
HpySE526I ACGT 1 cut(s) 1357
HspAI GCGC 1 cut(s) 1842
Kzo9I GATC 9 cut(s) 382, 578, 625, 772, 962, 1084, 1700, 1723, 1750
LguI GCTCTTC 1 cut(s) 261
LmnI GCTCC 3 cut(s) 221, 1939, 1981
Lsp1109I GCAGC 4 cut(s) 314, 1077, 1224, 2284
LweI GCATC 4 cut(s) 391, 700, 1989, 2383
MaeI CTAG 8 cut(s) 204, 380, 1145, 1437, 1593, 2240, 2294, 2559
MaeII ACGT 1 cut(s) 1357
MaeIII GTNAC 6 cut(s) 782, 874, 1147, 1353, 2597, 2920
MalI GATC 9 cut(s) 384, 580, 627, 774, 964, 1086, 1702, 1725, 1752
MbiI CCGCTC 1 cut(s) 429
MboI GATC 9 cut(s) 382, 578, 625, 772, 962, 1084, 1700, 1723, 1750
MfeI CAATTG 3 cut(s) 539, 686, 1244
MflI RGATCY 4 cut(s) 382, 578, 1723, 1750
MhlI GDGCHC 3 cut(s) 1565, 1628, 1936
MlsI TGGCCA 4 cut(s) 179, 886, 1345, 2214
MluNI TGGCCA 4 cut(s) 179, 886, 1345, 2214
MlyI GAGTC 4 cut(s) 281, 544, 691, 1229
MmeI TCCRAC 6 cut(s) 190, 243, 1119, 1976, 2592, 2681
Mox20I TGGCCA 4 cut(s) 179, 886, 1345, 2214
Mph1103I ATGCAT 1 cut(s) 150
MscI TGGCCA 4 cut(s) 179, 886, 1345, 2214
MseI TTAA 9 cut(s) 896, 978, 1029, 1272, 1370, 1943, 2675, 2754, 2958
MslI CAYNNNNRTG 3 cut(s) 113, 1133, 2480
Msp20I TGGCCA 4 cut(s) 179, 886, 1345, 2214
MspCI CTTAAG 1 cut(s) 2957
MspR9I CCNGG 5 cut(s) 176, 1462, 2817, 2888, 2993
MunI CAATTG 3 cut(s) 539, 686, 1244
Mva1269I GAATGC 1 cut(s) 148
MvaI CCWGG 5 cut(s) 176, 1462, 2817, 2888, 2993
MvnI CGCG 1 cut(s) 1930
MwoI GCNNNNNNNGC 6 cut(s) 910, 919, 1623, 1743, 1931, 2070
NcoI CCATGG 1 cut(s) 1771
NdeI CATATG 1 cut(s) 562
NdeII GATC 9 cut(s) 382, 578, 625, 772, 962, 1084, 1700, 1723, 1750
NlaIV GGNNCC 5 cut(s) 1111, 1626, 1935, 2737, 2857
NmuCI GTSAC 2 cut(s) 1353, 2920
NsiI ATGCAT 1 cut(s) 150
NspI RCATGY 9 cut(s) 39, 254, 351, 731, 853, 1138, 1609, 1897, 2485
PaeI GCATGC 3 cut(s) 254, 351, 1138
PagI TCATGA 1 cut(s) 2380
PceI AGGCCT 1 cut(s) 276
PciI ACATGT 6 cut(s) 35, 727, 849, 1605, 1893, 2481
PciSI GCTCTTC 1 cut(s) 261
PctI GAATGC 1 cut(s) 148
PflMI CCANNNNNTGG 1 cut(s) 2822
PfoI TCCNGGA 3 cut(s) 1460, 2815, 2991
PkrI GCNGC 5 cut(s) 329, 1067, 1214, 2299, 2349
PleI GAGTC 4 cut(s) 281, 543, 690, 1228
PpsI GAGTC 4 cut(s) 281, 543, 690, 1228
PpuMI RGGWCCY 1 cut(s) 1109
PscI ACATGT 6 cut(s) 35, 727, 849, 1605, 1893, 2481
PshBI ATTAAT 1 cut(s) 978
PsiI TTATAA 1 cut(s) 1827
Psp124BI GAGCTC 1 cut(s) 1565
Psp5II RGGWCCY 1 cut(s) 1109
Psp6I CCWGG 5 cut(s) 174, 1460, 2815, 2886, 2991
PspFI CCCAGC 3 cut(s) 1621, 1627, 2911
PspGI CCWGG 5 cut(s) 174, 1460, 2815, 2886, 2991
PspN4I GGNNCC 5 cut(s) 1111, 1626, 1935, 2737, 2857
PspOMI GGGCCC 1 cut(s) 1624
PspPI GGNCC 7 cut(s) 478, 1109, 1624, 1625, 2250, 2314, 2792
PspPPI RGGWCCY 1 cut(s) 1109
PsuI RGATCY 4 cut(s) 382, 578, 1723, 1750
RsaI GTAC 3 cut(s) 1340, 1413, 2149
RsaNI GTAC 3 cut(s) 1339, 1412, 2148
RseI CAYNNNNRTG 3 cut(s) 113, 1133, 2480
SacI GAGCTC 1 cut(s) 1565
SapI GCTCTTC 1 cut(s) 261
SaqAI TTAA 9 cut(s) 896, 978, 1029, 1272, 1370, 1943, 2675, 2754, 2958
SatI GCNGC 5 cut(s) 328, 1066, 1213, 2298, 2348
Sau3AI GATC 9 cut(s) 382, 578, 625, 772, 962, 1084, 1700, 1723, 1750
Sau96I GGNCC 7 cut(s) 478, 1109, 1624, 1625, 2250, 2314, 2792
SchI GAGTC 4 cut(s) 281, 544, 691, 1229
ScrFI CCNGG 5 cut(s) 176, 1462, 2817, 2888, 2993
SduI GDGCHC 3 cut(s) 1565, 1628, 1936
SfaNI GCATC 4 cut(s) 391, 700, 1989, 2383
SfcI CTRYAG 1 cut(s) 2078
SinI GGWCC 5 cut(s) 478, 1109, 2250, 2314, 2792
SmiMI CAYNNNNRTG 3 cut(s) 113, 1133, 2480
SmlI CTYRAG 5 cut(s) 809, 835, 1301, 1315, 2957
SmoI CTYRAG 5 cut(s) 809, 835, 1301, 1315, 2957
SpeI ACTAGT 1 cut(s) 1592
SphI GCATGC 3 cut(s) 254, 351, 1138
SseBI AGGCCT 1 cut(s) 276
SsiI CCGC 6 cut(s) 429, 1930, 2348, 2370, 2513, 3040
SspI AATATT 2 cut(s) 1041, 2332
SspMI CTAG 8 cut(s) 204, 380, 1145, 1437, 1593, 2240, 2294, 2559
SstI GAGCTC 1 cut(s) 1565
StuI AGGCCT 1 cut(s) 276
StyD4I CCNGG 5 cut(s) 174, 1460, 2815, 2886, 2991
StyI CCWWGG 4 cut(s) 1308, 1771, 2170, 3027
TaaI ACNGT 7 cut(s) 782, 2147, 2250, 2495, 2799, 2830, 2866
TaiI ACGT 1 cut(s) 1360
TaqI TCGA 3 cut(s) 411, 1796, 1886
TaqII GACCGA 1 cut(s) 932
TauI GCSGC 1 cut(s) 2350
Tru1I TTAA 9 cut(s) 896, 978, 1029, 1272, 1370, 1943, 2675, 2754, 2958
Tru9I TTAA 9 cut(s) 896, 978, 1029, 1272, 1370, 1943, 2675, 2754, 2958
TscAI CASTG 6 cut(s) 424, 580, 727, 2908, 2913, 2929
TseFI GTSAC 2 cut(s) 1353, 2920
TseI GCWGC 4 cut(s) 327, 1065, 1212, 2297
Tsp45I GTSAC 2 cut(s) 1353, 2920
TspDTI ATGAA 7 cut(s) 17, 97, 511, 658, 1775, 2294, 2618
TspRI CASTG 6 cut(s) 424, 580, 727, 2908, 2913, 2929
Van91I CCANNNNNTGG 1 cut(s) 2822
Vha464I CTTAAG 1 cut(s) 2957
VpaK11BI GGWCC 5 cut(s) 478, 1109, 2250, 2314, 2792
VspI ATTAAT 1 cut(s) 978
XapI RAATTY 9 cut(s) 665, 999, 1465, 2011, 2026, 2508, 2652, 2677, 2724
XbaI TCTAGA 2 cut(s) 379, 2558
XceI RCATGY 9 cut(s) 39, 254, 351, 731, 853, 1138, 1609, 1897, 2485
XcmI CCANNNNNNNNNTGG 1 cut(s) 2308
XmiI GTMKAC 1 cut(s) 2940
XspI CTAG 8 cut(s) 204, 380, 1145, 1437, 1593, 2240, 2294, 2559
Zsp2I ATGCAT 1 cut(s) 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.