RLG00000016653

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
8586810 .. 8589798
2989 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016653

Sequence Viewer

Length: 2340 bp
ATGACTGGTAGATCTATGCATTCTGCTTTGGCTGGGCTTGTGTGCCTGGCCATTGCCTTTGCTATTTGTTGTTCAAGTGTTGGAAACTCCAACTTTGTTAGGTGCTTGGAGAGTGAAAGGCATGCCCTTCTCCAGTTTAAACAAGGCCTTGTGGATGAGTTCGGTGTTCTTGCCTCTTGGAAAAGTGAGAAAGATTGCTGCAACTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTCACCCGTCTTGATTTCTCCTTCATTTTAACTGCACAATTTCCTTTAAGAGGTGAAATTAGTCCTTCAGTACTTGAATTGCAATATCTAAATTACTTGGACCTCAGTTGGAGTGATTTTGAAGGAATTATGATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAACAACTAAGACTCGTAGAAGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTGGATCTTTCCTTCAACAGTTATGTTAGTTTTGAAAATCTTCAGTGGTTATCTCATCTTTCTTCCTTGAGATATCTGGACTTATCATATTTGGATTTGCCCAAGGCTGTGAATTGGCCAAGCAAGCTCACTTCACTGACCGAGCTTCATTTAGCTGGGTCTAATCTTCCTGATGTCTATATAAGATCACTTTCCTTTCTTAATTCTTCCAGCTCTCTTCAAGTCCTTGACCTCTCTTTTAACAATCTTCATTCTTCAATATTTTATTGGATAGCCAATTTCAGCAATAACATTGTCGATATTCAATTATCGTCAAATCTATTACAAGGTCCCATCCCAGATTTCTTCACAAACATGTTTTCTCTAGCAGCACTAGATTTGTCTAACAATCAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCTTTGTACTTAGGGTTAAACAAATTGTCTGAAAATATTGAGGACTCTATAAAAACCTTGTCTTGTGCTGAGAACACACTTGAGACCTTGTACTTGAGAGAAAACCAGTTTTGGGGGTCATGGCCAGATTTGAGACGTTTTTCAAAGTTAAGAGAGTTGGATCTTTCTGGTAATCAACTAAATGGGTCTCTACCTCAGAGTGTCGGGCAACTCTCTAGCCTTGAAGAACTATCTCTCTCCGAGAATTCTTTAACCGGCGTTATAACAGAATCTCATTTTCTGAACCTCTCTAGCCTACAAACTTTGGATCTTTTTGGTAATCATTTCTCTATTAACCTGAGTTCTGATTGGAGTCCACCATTTCAACTTAGTGGTAGGCTAGACATGTCCGTCTACAAGCTGGGCCCAGCTTTTCCCAAATGGATTCTAAAGCAAACAAATCTTGCTGAGCTTAATCTCTCTAATGCTGGACTATCAGGATTATTACCTGATAAGTTTTGGGATCTATTTTCTGGCTTATTTAGCTTAGATCTCTCTATGAATCAAATCCATGGGAAAGTGCCGAATCTGTCAACAACAAGCTTGGTTCATGTTCACTTGTCTTCTAATCTACTTTCTGGTGCATTTCCATCAATACCTCGGAAGCTTATCACATTGTCTCTCTCGAAAAACATGTTTTCAGGACCCCTGTCTTCCTTGTGTACAACACTGCCCCCTTCAAACTTGTATGCCCTCGACCTTTCTGAAAACCTACTGTCAGGGGAGCTTCCTAATTGTTGGATGCAATTTCAAAATTTGGAACAGTTGAATTTGGGAAGGAATAAATTATCTGGGATGATACCAAGCTCGTTAGGCAATATGCAGGGAATATGCGTATTACGAATAGAAATTGAGTTTGGGAAAAATCTTGTGGGTATGAGAAGCATTGACATTTCGAGCAACTATTTGATTGGGGAAATTCCGCAAAGTATAGAGAGCATGACAGAGTTGATTTCTCTGAACCTGTCAAGAAACTATTTGACGGGAAAGCTTCCTGAAAACTTCGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTAAGATTCCTGCAAGTTTTTCAAGATTAAATTTCCTTGCAGTATTGGACGTATCACACAACCACTTGTCAGGAAGAATTCCACTAAGCACACAACTTCAGAGTTTTAATGCTTCTGCATATATGGCAAATCTTGGACTTTGTGGACCACCCTTAACACAAATTTGTCCAGGGGATGGAACAGCTCAAGATAATGGAATTACGAGAGGCAGTGACACTGATAACAAGGAACATGATAATGATGGTCTCATTAAGGAGACTTCAAAGATGGATGGTCATGAGCTTCTGGCGTTCGGTGGAATGAGCCTAATTGCTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

780

Amino Acids

85.9

Weight (kDa)

5.27

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 75 4.1e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 101 - 247 3.1e-08 Leucine-rich repeat region
LRR_8 PF13855 261 - 317 3.9e-07 Leucine rich repeat
LRR_8 PF13855 357 - 417 5.9e-09 Leucine rich repeat
LRR_8 PF13855 614 - 672 2.1e-09 Leucine rich repeat
LRR_8 PF13855 638 - 696 5.6e-10 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1187
AasI GACNNNNNNGTC 1 cut(s) 1313
AccB7I CCANNNNNTGG 1 cut(s) 2195
AccI GTMKAC 1 cut(s) 1317
AciI CCGC 1 cut(s) 1886
AclWI GGATC 4 cut(s) 495, 1092, 1239, 1434
AcoI YGGCCR 3 cut(s) 48, 599, 1046
AcsI RAATTY 7 cut(s) 1168, 1717, 1732, 1881, 2050, 2097, 2181
AcuI CTGAAG 3 cut(s) 291, 509, 2102
AfaI GTAC 4 cut(s) 312, 932, 1016, 1627
AfiI CCNNNNNNNGG 4 cut(s) 290, 458, 1036, 2195
AflIII ACRYGT 3 cut(s) 837, 1308, 1596
AjnI CCWGG 2 cut(s) 45, 2188
AjuI GAANNNNNNNTTGG 2 cut(s) 1803, 1835
Alw26I GTCTC 6 cut(s) 1001, 1051, 1116, 1587, 2270, 2270
AlwI GGATC 4 cut(s) 495, 1092, 1239, 1434
AoxI GGCC 5 cut(s) 48, 145, 599, 1046, 1327
ApaI GGGCCC 1 cut(s) 1331
ApeKI GCWGC 3 cut(s) 198, 851, 915
ApoI RAATTY 7 cut(s) 1168, 1717, 1732, 1881, 2050, 2097, 2181
Asp700I GAANNNNTTC 1 cut(s) 522
AspS9I GGNCC 7 cut(s) 340, 440, 812, 1327, 1328, 1607, 2165
AsuHPI GGTGA 2 cut(s) 235, 305
AvaII GGWCC 5 cut(s) 340, 440, 812, 1607, 2165
BaeGI GKGCMC 1 cut(s) 1331
BalI TGGCCA 3 cut(s) 50, 601, 1048
BanII GRGCYC 1 cut(s) 1331
BarI GAAGNNNNNNTAC 2 cut(s) 873, 905
BbsI GAAGAC 2 cut(s) 1518, 1608
BbvI GCAGC 3 cut(s) 185, 863, 927
BccI CCATC 6 cut(s) 824, 1561, 2189, 2255, 2281, 2285
BciT130I CCWGG 2 cut(s) 47, 2190
BciVI GTATCC 1 cut(s) 882
BcoDI GTCTC 6 cut(s) 1001, 1051, 1116, 1587, 2270, 2270
BfaI CTAG 5 cut(s) 848, 857, 1140, 1215, 1304
BfuI GTATCC 1 cut(s) 882
BglII AGATCT 2 cut(s) 11, 1453
BisI GCNGC 3 cut(s) 199, 852, 916
BlpI GCTNAGC 1 cut(s) 1371
BlsI GCNGC 3 cut(s) 200, 853, 917
BmcAI AGTACT 1 cut(s) 312
Bme1390I CCNGG 2 cut(s) 47, 2190
Bme18I GGWCC 5 cut(s) 340, 440, 812, 1607, 2165
BmgT120I GGNCC 7 cut(s) 340, 440, 812, 1327, 1328, 1607, 2165
BmiI GGNNCC 3 cut(s) 814, 1329, 1609
BmrFI CCNGG 2 cut(s) 47, 2190
BmsI GCATC 1 cut(s) 1695
BoxI GACNNNNGTC 1 cut(s) 1612
BpiI GAAGAC 2 cut(s) 1518, 1608
BpmI CTGGAG 2 cut(s) 116, 226
Bpu1102I GCTNAGC 1 cut(s) 1371
BpuEI CTTGAG 4 cut(s) 571, 1025, 1039, 2190
BsaI GGTCTC 3 cut(s) 1001, 1116, 2270
BsaJI CCNNGG 4 cut(s) 585, 1474, 1562, 2189
Bsc4I CCNNNNNNNGG 4 cut(s) 290, 458, 1036, 2195
Bse118I RCCGGY 1 cut(s) 1178
Bse1I ACTGG 4 cut(s) 10, 133, 209, 1030
Bse3DI GCAATG 1 cut(s) 51
BseBI CCWGG 2 cut(s) 47, 2190
BseDI CCNNGG 4 cut(s) 585, 1474, 1562, 2189
BseGI GGATG 6 cut(s) 160, 816, 1710, 1764, 2200, 2296
BseLI CCNNNNNNNGG 4 cut(s) 290, 458, 1036, 2195
BseMI GCAATG 1 cut(s) 51
BseMII CTCAG 5 cut(s) 358, 984, 1133, 1253, 1362
BseNI ACTGG 4 cut(s) 10, 133, 209, 1030
BseSI GKGCMC 1 cut(s) 1331
BseXI GCAGC 3 cut(s) 185, 863, 927
BseYI CCCAGC 4 cut(s) 32, 638, 1324, 1330
BsgI GTGCAG 1 cut(s) 258
BshFI GGCC 5 cut(s) 50, 147, 601, 1048, 1329
BsiSI CCGG 1 cut(s) 1179
BslFI GGGAC 1 cut(s) 798
BslI CCNNNNNNNGG 4 cut(s) 290, 458, 1036, 2195
BsmAI GTCTC 6 cut(s) 1001, 1051, 1116, 1587, 2270, 2270
BsmBI CGTCTC 1 cut(s) 1051
BsmFI GGGAC 1 cut(s) 798
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 5 cut(s) 50, 147, 601, 1048, 1329
Bso31I GGTCTC 3 cut(s) 1001, 1116, 2270
Bsp120I GGGCCC 1 cut(s) 1327
Bsp1286I GDGCHC 1 cut(s) 1331
Bsp1407I TGTACA 1 cut(s) 1625
Bsp143I GATC 7 cut(s) 11, 487, 668, 1084, 1231, 1426, 1453
Bsp1720I GCTNAGC 1 cut(s) 1371
Bsp19I CCATGG 1 cut(s) 1474
BspACI CCGC 1 cut(s) 1886
BspANI GGCC 5 cut(s) 50, 147, 601, 1048, 1329
BspCNI CTCAG 5 cut(s) 357, 985, 1132, 1254, 1363
BspHI TCATGA 1 cut(s) 2296
BspLI GGNNCC 3 cut(s) 814, 1329, 1609
BspPI GGATC 4 cut(s) 495, 1092, 1239, 1434
BspTNI GGTCTC 3 cut(s) 1001, 1116, 2270
BsrDI GCAATG 1 cut(s) 51
BsrFI RCCGGY 1 cut(s) 1178
BsrGI TGTACA 1 cut(s) 1625
BsrI ACTGG 4 cut(s) 10, 133, 209, 1030
BssAI RCCGGY 1 cut(s) 1178
BssECI CCNNGG 4 cut(s) 585, 1474, 1562, 2189
BssMI GATC 7 cut(s) 11, 487, 668, 1084, 1231, 1426, 1453
BssT1I CCWWGG 2 cut(s) 585, 1474
Bst2UI CCWGG 2 cut(s) 47, 2190
Bst4CI ACNGT 3 cut(s) 503, 1680, 1728
Bst6I CTCTTC 1 cut(s) 705
BstAUI TGTACA 1 cut(s) 1625
BstC8I GCNNGC 3 cut(s) 123, 220, 608
BstDSI CCRYGG 1 cut(s) 1474
BstENI CCTNNNNNAGG 1 cut(s) 288
BstF5I GGATG 6 cut(s) 160, 816, 1710, 1764, 2200, 2296
BstKTI GATC 7 cut(s) 14, 490, 671, 1087, 1234, 1429, 1456
BstMAI GTCTC 6 cut(s) 1001, 1051, 1116, 1587, 2270, 2270
BstMBI GATC 7 cut(s) 11, 487, 668, 1084, 1231, 1426, 1453
BstMWI GCNNNNNNNGC 4 cut(s) 607, 1446, 1776, 2144
BstNI CCWGG 2 cut(s) 47, 2190
BstNSI RCATGY 5 cut(s) 125, 222, 841, 1312, 1600
BstPAI GACNNNNGTC 1 cut(s) 1612
BstSCI CCNGG 2 cut(s) 45, 2188
BstSLI GKGCMC 1 cut(s) 1331
BstV1I GCAGC 3 cut(s) 185, 863, 927
BstV2I GAAGAC 2 cut(s) 1518, 1608
BstX2I RGATCY 6 cut(s) 11, 487, 1084, 1231, 1426, 1453
BstXI CCANNNNNNTGG 1 cut(s) 2018
BstYI RGATCY 6 cut(s) 11, 487, 1084, 1231, 1426, 1453
BsuI GTATCC 1 cut(s) 882
BsuRI GGCC 5 cut(s) 50, 147, 601, 1048, 1329
BtgI CCRYGG 1 cut(s) 1474
BtsCI GGATG 6 cut(s) 160, 816, 1710, 1764, 2200, 2296
BtsI GCAGTG 2 cut(s) 1631, 2236
BtsIMutI CAGTG 6 cut(s) 442, 533, 617, 1631, 2235, 2236
Cac8I GCNNGC 3 cut(s) 123, 220, 608
CciI TCATGA 1 cut(s) 2296
Cfr10I RCCGGY 1 cut(s) 1178
Cfr13I GGNCC 7 cut(s) 340, 440, 812, 1327, 1328, 1607, 2165
Csp6I GTAC 4 cut(s) 311, 931, 1015, 1626
CviQI GTAC 4 cut(s) 311, 931, 1015, 1626
DpnI GATC 7 cut(s) 13, 489, 670, 1086, 1233, 1428, 1455
DpnII GATC 7 cut(s) 11, 487, 668, 1084, 1231, 1426, 1453
DraI TTTAAA 1 cut(s) 139
DrdI GACNNNNNNGTC 1 cut(s) 1313
DseDI GACNNNNNNGTC 1 cut(s) 1313
EaeI YGGCCR 3 cut(s) 48, 599, 1046
Eam1104I CTCTTC 1 cut(s) 705
EarI CTCTTC 1 cut(s) 705
Eco130I CCWWGG 2 cut(s) 585, 1474
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 1 cut(s) 1331
Eco31I GGTCTC 3 cut(s) 1001, 1116, 2270
Eco32I GATATC 2 cut(s) 557, 2016
Eco47I GGWCC 5 cut(s) 340, 440, 812, 1607, 2165
Eco57I CTGAAG 3 cut(s) 291, 509, 2102
EcoNI CCTNNNNNAGG 1 cut(s) 288
EcoO109I RGGNCCY 2 cut(s) 812, 1607
EcoRI GAATTC 2 cut(s) 1168, 2097
EcoRII CCWGG 2 cut(s) 45, 2188
EcoRV GATATC 2 cut(s) 557, 2016
EcoT14I CCWWGG 2 cut(s) 585, 1474
EcoT22I ATGCAT 1 cut(s) 21
EcoT38I GRGCYC 1 cut(s) 1331
ErhI CCWWGG 2 cut(s) 585, 1474
Esp3I CGTCTC 1 cut(s) 1051
FaqI GGGAC 1 cut(s) 798
FblI GTMKAC 1 cut(s) 1317
Fnu4HI GCNGC 3 cut(s) 199, 852, 916
FokI GGATG 6 cut(s) 167, 803, 1717, 1771, 2207, 2303
FriOI GRGCYC 1 cut(s) 1331
Fsp4HI GCNGC 3 cut(s) 199, 852, 916
FspBI CTAG 5 cut(s) 848, 857, 1140, 1215, 1304
GluI GCNGC 3 cut(s) 199, 852, 916
GsaI CCCAGC 4 cut(s) 36, 642, 1328, 1334
GsuI CTGGAG 2 cut(s) 116, 226
HaeIII GGCC 5 cut(s) 50, 147, 601, 1048, 1329
HapII CCGG 1 cut(s) 1179
HincII GTYRAC 1 cut(s) 1497
HindII GTYRAC 1 cut(s) 1497
HindIII AAGCTT 3 cut(s) 1504, 1568, 1952
HpaII CCGG 1 cut(s) 1179
HphI GGTGA 2 cut(s) 235, 305
Hpy166II GTNNAC 7 cut(s) 440, 1280, 1318, 1497, 1519, 1626, 2165
Hpy188I TCNGA 9 cut(s) 955, 1122, 1165, 1206, 1270, 1566, 1669, 1923, 2121
Hpy8I GTNNAC 7 cut(s) 440, 1280, 1318, 1497, 1519, 1626, 2165
HpyAV CCTTC 8 cut(s) 137, 271, 315, 356, 505, 875, 1650, 1734
HpyCH4III ACNGT 3 cut(s) 503, 1680, 1728
HpyCH4IV ACGT 2 cut(s) 1060, 2070
HpyF10VI GCNNNNNNNGC 4 cut(s) 607, 1446, 1776, 2144
HpySE526I ACGT 2 cut(s) 1060, 2070
Kzo9I GATC 7 cut(s) 11, 487, 668, 1084, 1231, 1426, 1453
LmnI GCTCC 1 cut(s) 1687
Lsp1109I GCAGC 3 cut(s) 185, 863, 927
LweI GCATC 1 cut(s) 1695
MaeI CTAG 5 cut(s) 848, 857, 1140, 1215, 1304
MaeII ACGT 2 cut(s) 1060, 2070
MaeIII GTNAC 3 cut(s) 241, 1970, 2231
MalI GATC 7 cut(s) 13, 489, 670, 1086, 1233, 1428, 1455
MboI GATC 7 cut(s) 11, 487, 668, 1084, 1231, 1426, 1453
MfeI CAATTG 1 cut(s) 401
MflI RGATCY 6 cut(s) 11, 487, 1084, 1231, 1426, 1453
MhlI GDGCHC 1 cut(s) 1331
MlsI TGGCCA 3 cut(s) 50, 601, 1048
MluNI TGGCCA 3 cut(s) 50, 601, 1048
MlyI GAGTC 5 cut(s) 406, 411, 932, 962, 1285
MmeI TCCRAC 6 cut(s) 61, 114, 329, 1062, 1682, 1965
Mox20I TGGCCA 3 cut(s) 50, 601, 1048
Mph1103I ATGCAT 1 cut(s) 21
MroXI GAANNNNTTC 1 cut(s) 522
MscI TGGCCA 3 cut(s) 50, 601, 1048
MslI CAYNNNNRTG 3 cut(s) 836, 1979, 2256
Msp20I TGGCCA 3 cut(s) 50, 601, 1048
MspI CCGG 1 cut(s) 1179
MspR9I CCNGG 2 cut(s) 47, 2190
MssI GTTTAAAC 1 cut(s) 139
MunI CAATTG 1 cut(s) 401
Mva1269I GAATGC 1 cut(s) 19
MvaI CCWGG 2 cut(s) 47, 2190
MwoI GCNNNNNNNGC 4 cut(s) 607, 1446, 1776, 2144
NcoI CCATGG 1 cut(s) 1474
NdeII GATC 7 cut(s) 11, 487, 668, 1084, 1231, 1426, 1453
NlaIV GGNNCC 3 cut(s) 814, 1329, 1609
NmuCI GTSAC 2 cut(s) 241, 2231
NsiI ATGCAT 1 cut(s) 21
NspI RCATGY 5 cut(s) 125, 222, 841, 1312, 1600
PaeI GCATGC 2 cut(s) 125, 222
PagI TCATGA 1 cut(s) 2296
PceI AGGCCT 1 cut(s) 147
PciI ACATGT 3 cut(s) 837, 1308, 1596
PctI GAATGC 1 cut(s) 19
PdmI GAANNNNTTC 1 cut(s) 522
PfeI GAWTC 7 cut(s) 373, 1193, 1348, 1465, 1489, 1988, 2026
PflMI CCANNNNNTGG 1 cut(s) 2195
PkrI GCNGC 3 cut(s) 200, 853, 917
PleI GAGTC 5 cut(s) 405, 411, 931, 962, 1284
PmeI GTTTAAAC 1 cut(s) 139
PpsI GAGTC 5 cut(s) 405, 411, 931, 962, 1284
PpuMI RGGWCCY 2 cut(s) 812, 1607
PscI ACATGT 3 cut(s) 837, 1308, 1596
PshAI GACNNNNGTC 1 cut(s) 1612
PsiI TTATAA 1 cut(s) 1187
Psp5II RGGWCCY 2 cut(s) 812, 1607
Psp6I CCWGG 2 cut(s) 45, 2188
PspFI CCCAGC 4 cut(s) 32, 638, 1324, 1330
PspGI CCWGG 2 cut(s) 45, 2188
PspN4I GGNNCC 3 cut(s) 814, 1329, 1609
PspOMI GGGCCC 1 cut(s) 1327
PspPI GGNCC 7 cut(s) 340, 440, 812, 1327, 1328, 1607, 2165
PspPPI RGGWCCY 2 cut(s) 812, 1607
PsuI RGATCY 6 cut(s) 11, 487, 1084, 1231, 1426, 1453
RsaI GTAC 4 cut(s) 312, 932, 1016, 1627
RsaNI GTAC 4 cut(s) 311, 931, 1015, 1626
RseI CAYNNNNRTG 3 cut(s) 836, 1979, 2256
SatI GCNGC 3 cut(s) 199, 852, 916
Sau3AI GATC 7 cut(s) 11, 487, 668, 1084, 1231, 1426, 1453
Sau96I GGNCC 7 cut(s) 340, 440, 812, 1327, 1328, 1607, 2165
ScaI AGTACT 1 cut(s) 312
SchI GAGTC 5 cut(s) 406, 411, 932, 962, 1285
ScrFI CCNGG 2 cut(s) 47, 2190
SduI GDGCHC 1 cut(s) 1331
SfaNI GCATC 1 cut(s) 1695
SinI GGWCC 5 cut(s) 340, 440, 812, 1607, 2165
SmiMI CAYNNNNRTG 3 cut(s) 836, 1979, 2256
SmlI CTYRAG 4 cut(s) 550, 1004, 1018, 2205
SmoI CTYRAG 4 cut(s) 550, 1004, 1018, 2205
SphI GCATGC 2 cut(s) 125, 222
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 1 cut(s) 1886
SspI AATATT 2 cut(s) 744, 961
SspMI CTAG 5 cut(s) 848, 857, 1140, 1215, 1304
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 2 cut(s) 45, 2188
StyI CCWWGG 2 cut(s) 585, 1474
TaaI ACNGT 3 cut(s) 503, 1680, 1728
TaiI ACGT 2 cut(s) 1063, 2073
TaqI TCGA 4 cut(s) 780, 1589, 1659, 1859
TaqII GACCGA 1 cut(s) 638
TatI WGTACW 4 cut(s) 310, 930, 1014, 1625
TfiI GAWTC 7 cut(s) 373, 1193, 1348, 1465, 1489, 1988, 2026
TscAI CASTG 6 cut(s) 442, 533, 624, 1638, 2236, 2242
TseFI GTSAC 2 cut(s) 241, 2231
TseI GCWGC 3 cut(s) 198, 851, 915
Tsp45I GTSAC 2 cut(s) 241, 2231
TspDTI ATGAA 7 cut(s) 253, 373, 620, 722, 1478, 1502, 1991
TspGWI ACGGA 1 cut(s) 1303
TspRI CASTG 6 cut(s) 442, 533, 624, 1638, 2236, 2242
Van91I CCANNNNNTGG 1 cut(s) 2195
VpaK11BI GGWCC 5 cut(s) 340, 440, 812, 1607, 2165
XagI CCTNNNNNAGG 1 cut(s) 288
XapI RAATTY 7 cut(s) 1168, 1717, 1732, 1881, 2050, 2097, 2181
XceI RCATGY 5 cut(s) 125, 222, 841, 1312, 1600
XmiI GTMKAC 1 cut(s) 1317
XmnI GAANNNNTTC 1 cut(s) 522
XspI CTAG 5 cut(s) 848, 857, 1140, 1215, 1304
ZrmI AGTACT 1 cut(s) 312
Zsp2I ATGCAT 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.