RchiOBHm_Chr7g0206921

Leucine Rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000028
Physical Location & Seq
Reverse (-)
24428265 .. 24430049
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18521

Sequence Viewer

Length: 1785 bp
ATGCTTCCACTCTGCAGTTTGCATATCATCTTCGTAATCATGTTTTACAGTATAATGAGTGGTAGATCTGTGCATTCTGTTTTGGTTGGGCTTGTGTGCCTGGCCCTTGCCTCTGCTATTTGTTGTTCAAGTGTTGGAAGCTCCAACAACATTATGTGCTTGGAGAGTGAAAGACATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGAGTCCAATGCTCTTGCTTCTTGGGAAAACAAGAAAGATTGCTGCAAGTGGAGAGGAATAGCGTGCAACAACCAAACAGGTCATGTCACAAGACTTGATTTGCCCTTTATATCTTTCAATTATACTGAAGTTCCTTTAAGAGGTGAAATTAGTCATTCACTACTTGAATTGCCATATCTAAATTACTTGGACCTCAGTTATAATGATTTTGGAGGAATGATCATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGCAGCTGCTGATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCATACTCTTGATCTTTCCTTCAATGATTTTGAAGGAATGATGGTTCCCAAATTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGCAGCTGCTGATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCATACTCTTGATCTTTCCTTCAATGATTTTGAAGGAATGATGGTTCCCAAATTCATTGGCTTTTTGAGTCAATTGAAGGAACTCAAACTTGCAGCTGCTGATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTCGATCTTTCCGTGAACCATGATGCTAGTTCTGAAAACCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGGCACGGCTGAATTTGTCTGAGGCTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTTACTGACAGAGCTTCAGTTATCCCAGTGTAACCTTCCTGATGTCAATCTAAGATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAACTCCTTGACCTCTCTTGGAACTCTCTTAATTCTTCAATATTTTATTGGATAGCCAATGTCAGTAGCAACTTTGTCCATATTGATCTCTCTTTCAACAATCTCGAAAGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTATATCTGTCTTCGAATCAACTTGAAGGTCTCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTAGATCTGTCACGGAATCAACTTGAAGGTGGGATACCAAAAAGCTTTCAAAACTTATGCAGCTTAGAATCGTTGACCTTATGGTCAAACCAATTGTCTGAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGAGACCTTGCACTTGTGTTTGAACCAACTTTGGGGGTCCTGGCCAGATTTGAAACGTTTTTCAAAGTTAAGAGAGTTAGATCTTTCCATTAATCAACTAAATGGCTCTGTACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGAATTTTTATCTCTCGGGGGTAATTCTTTCACTGGTGTCATAACAGAATCCCACTTTCTGAACCTCTCTCGTTTACAGATTTTGGAGCTTTCTGGTAATCGTTTCTCTATCAACCTGAGCTCTGATTGGAATCCACCATTTCAACTTGGTTTGTTAGGCATGTCCTCTTGCAAGGTGGGCCCAGCTTTCCCAAGTGGATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

594

Amino Acids

65.47

Weight (kDa)

4.98

Isoelectric Point (pI)

39.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 55 - 93 7.8e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 122 - 209 6.1e-07 Leucine-rich repeat region
LRR_14 PF23598 196 - 415 5.2e-16 Leucine-rich repeat region
LRR_8 PF13855 382 - 438 9.4e-10 Leucine rich repeat
LRR_8 PF13855 403 - 462 6.5e-11 Leucine rich repeat
LRR_8 PF13855 479 - 536 5.4e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 411
AasI GACNNNNNNGTC 1 cut(s) 1372
AclI AACGTT 1 cut(s) 1495
AcoI YGGCCR 2 cut(s) 953, 1481
AcsI RAATTY 4 cut(s) 587, 734, 931, 1583
AcuI CTGAAG 2 cut(s) 357, 977
AfaI GTAC 1 cut(s) 1551
AfiI CCNNNNNNNGG 6 cut(s) 350, 518, 665, 812, 919, 1471
AjnI CCWGG 2 cut(s) 99, 1478
AloI GAACNNNNNNTCC 4 cut(s) 564, 596, 711, 743
Alw21I GWGCWC 1 cut(s) 1703
Alw26I GTCTC 2 cut(s) 1253, 1436
AlwNI CAGNNNCTG 3 cut(s) 488, 635, 782
Ama87I CYCGRG 2 cut(s) 1553, 1595
AoxI GGCC 5 cut(s) 102, 199, 953, 1481, 1759
ApaI GGGCCC 1 cut(s) 1763
ApeKI GCWGC 8 cut(s) 252, 482, 485, 629, 632, 776, 779, 1350
ApoI RAATTY 4 cut(s) 587, 734, 931, 1583
ArsI GACNNNNNNTTYG 2 cut(s) 1370, 1402
AseI ATTAAT 2 cut(s) 1047, 1530
AspS9I GGNCC 8 cut(s) 103, 400, 500, 647, 794, 1476, 1759, 1760
AsuHPI GGTGA 1 cut(s) 365
AsuII TTCGAA 1 cut(s) 1232
AvaI CYCGRG 2 cut(s) 1553, 1595
AvaII GGWCC 5 cut(s) 400, 500, 647, 794, 1476
BaeGI GKGCMC 1 cut(s) 1763
BalI TGGCCA 2 cut(s) 955, 1483
BanII GRGCYC 2 cut(s) 1703, 1763
BarI GAAGNNNNNNTAC 2 cut(s) 1308, 1340
BbsI GAAGAC 3 cut(s) 1183, 1221, 1255
Bbv12I GWGCWC 1 cut(s) 1703
BbvI GCAGC 8 cut(s) 239, 472, 494, 619, 641, 766, 788, 1362
BccI CCATC 3 cut(s) 571, 718, 1187
BceAI ACGGC 1 cut(s) 941
BciT130I CCWGG 2 cut(s) 101, 1480
BciVI GTATCC 1 cut(s) 1317
BclI TGATCA 1 cut(s) 429
BcoDI GTCTC 2 cut(s) 1253, 1436
BfaI CTAG 5 cut(s) 864, 1211, 1283, 1292, 1575
BfmI CTRYAG 1 cut(s) 13
BfuI GTATCC 1 cut(s) 1317
BglII AGATCT 3 cut(s) 65, 1294, 1519
BisI GCNGC 8 cut(s) 253, 483, 486, 630, 633, 777, 780, 1351
BlsI GCNGC 8 cut(s) 254, 484, 487, 631, 634, 778, 781, 1352
Bme1390I CCNGG 2 cut(s) 101, 1480
Bme18I GGWCC 5 cut(s) 400, 500, 647, 794, 1476
BmeT110I CYCGRG 2 cut(s) 1553, 1595
BmgT120I GGNCC 8 cut(s) 103, 400, 500, 647, 794, 1476, 1759, 1760
BmiI GGNNCC 4 cut(s) 582, 729, 1477, 1761
BmrFI CCNGG 2 cut(s) 101, 1480
BmrI ACTGGG 1 cut(s) 997
BmsI GCATC 1 cut(s) 850
BmuI ACTGGG 1 cut(s) 997
BpiI GAAGAC 3 cut(s) 1183, 1221, 1255
BpmI CTGGAG 1 cut(s) 170
Bpu10I CCTNAGC 1 cut(s) 1697
Bpu14I TTCGAA 1 cut(s) 1232
BpuEI CTTGAG 3 cut(s) 899, 925, 1460
BsaBI GATNNNNATC 2 cut(s) 1023, 1710
BsaI GGTCTC 2 cut(s) 1253, 1436
Bsc4I CCNNNNNNNGG 6 cut(s) 350, 518, 665, 812, 919, 1471
Bse1I ACTGG 3 cut(s) 187, 1003, 1618
Bse8I GATNNNNATC 2 cut(s) 1023, 1710
BseBI CCWGG 2 cut(s) 101, 1480
BseGI GGATG 3 cut(s) 214, 1179, 1251
BseJI GATNNNNATC 2 cut(s) 1023, 1710
BseLI CCNNNNNNNGG 6 cut(s) 350, 518, 665, 812, 919, 1471
BseMII CTCAG 4 cut(s) 418, 930, 1419, 1688
BseNI ACTGG 3 cut(s) 187, 1003, 1618
BseSI GKGCMC 1 cut(s) 1763
BseXI GCAGC 8 cut(s) 239, 472, 494, 619, 641, 766, 788, 1362
BseYI CCCAGC 1 cut(s) 1762
BshFI GGCC 5 cut(s) 104, 201, 955, 1483, 1761
BsiHKAI GWGCWC 1 cut(s) 1703
BsiHKCI CYCGRG 2 cut(s) 1553, 1595
BslFI GGGAC 1 cut(s) 1161
BslI CCNNNNNNNGG 6 cut(s) 350, 518, 665, 812, 919, 1471
BsmAI GTCTC 2 cut(s) 1253, 1436
BsmFI GGGAC 1 cut(s) 1161
BsmI GAATGC 1 cut(s) 73
BsnI GGCC 5 cut(s) 104, 201, 955, 1483, 1761
Bso31I GGTCTC 2 cut(s) 1253, 1436
BsoBI CYCGRG 2 cut(s) 1553, 1595
Bsp119I TTCGAA 1 cut(s) 1232
Bsp120I GGGCCC 1 cut(s) 1759
Bsp1286I GDGCHC 2 cut(s) 1703, 1763
Bsp143I GATC 9 cut(s) 65, 429, 547, 694, 841, 1031, 1150, 1294, 1519
BspANI GGCC 5 cut(s) 104, 201, 955, 1483, 1761
BspCNI CTCAG 4 cut(s) 417, 931, 1420, 1689
BspLI GGNNCC 4 cut(s) 582, 729, 1477, 1761
BspMAI CTGCAG 1 cut(s) 17
BspQI GCTCTTC 1 cut(s) 186
BspT104I TTCGAA 1 cut(s) 1232
BspTNI GGTCTC 2 cut(s) 1253, 1436
BsrI ACTGG 3 cut(s) 187, 1003, 1618
BssMI GATC 9 cut(s) 65, 429, 547, 694, 841, 1031, 1150, 1294, 1519
Bst2UI CCWGG 2 cut(s) 101, 1480
Bst4CI ACNGT 1 cut(s) 50
Bst6I CTCTTC 2 cut(s) 186, 1068
BstBI TTCGAA 1 cut(s) 1232
BstC8I GCNNGC 4 cut(s) 274, 971, 1202, 1274
BstDEI CTNAG 6 cut(s) 404, 939, 1028, 1354, 1428, 1697
BstENI CCTNNNNNAGG 1 cut(s) 348
BstF5I GGATG 3 cut(s) 214, 1179, 1251
BstKTI GATC 9 cut(s) 68, 432, 550, 697, 844, 1034, 1153, 1297, 1522
BstMAI GTCTC 2 cut(s) 1253, 1436
BstMBI GATC 9 cut(s) 65, 429, 547, 694, 841, 1031, 1150, 1294, 1519
BstMWI GCNNNNNNNGC 1 cut(s) 1758
BstNI CCWGG 2 cut(s) 101, 1480
BstNSI RCATGY 4 cut(s) 179, 1204, 1276, 1744
BstSCI CCNGG 2 cut(s) 99, 1478
BstSFI CTRYAG 1 cut(s) 13
BstSLI GKGCMC 1 cut(s) 1763
BstV1I GCAGC 8 cut(s) 239, 472, 494, 619, 641, 766, 788, 1362
BstV2I GAAGAC 3 cut(s) 1183, 1221, 1255
BstX2I RGATCY 3 cut(s) 65, 1294, 1519
BstYI RGATCY 3 cut(s) 65, 1294, 1519
BsuI GTATCC 1 cut(s) 1317
BsuRI GGCC 5 cut(s) 104, 201, 955, 1483, 1761
BtsCI GGATG 3 cut(s) 214, 1179, 1251
BtsIMutI CAGTG 5 cut(s) 502, 649, 796, 1010, 1611
Cac8I GCNNGC 4 cut(s) 274, 971, 1202, 1274
CaiI CAGNNNCTG 3 cut(s) 488, 635, 782
Cfr13I GGNCC 8 cut(s) 103, 400, 500, 647, 794, 1476, 1759, 1760
Csp6I GTAC 1 cut(s) 1550
CviAII CATG 8 cut(s) 40, 176, 293, 857, 919, 1201, 1273, 1741
CviQI GTAC 1 cut(s) 1550
DdeI CTNAG 6 cut(s) 404, 939, 1028, 1354, 1428, 1697
DpnI GATC 9 cut(s) 67, 431, 549, 696, 843, 1033, 1152, 1296, 1521
DpnII GATC 9 cut(s) 65, 429, 547, 694, 841, 1031, 1150, 1294, 1519
DrdI GACNNNNNNGTC 1 cut(s) 1372
DseDI GACNNNNNNGTC 1 cut(s) 1372
EaeI YGGCCR 2 cut(s) 953, 1481
Eam1104I CTCTTC 2 cut(s) 186, 1068
EarI CTCTTC 2 cut(s) 186, 1068
Ecl136II GAGCTC 1 cut(s) 1701
Eco147I AGGCCT 1 cut(s) 201
Eco24I GRGCYC 2 cut(s) 1703, 1763
Eco31I GGTCTC 2 cut(s) 1253, 1436
Eco47I GGWCC 5 cut(s) 400, 500, 647, 794, 1476
Eco53kI GAGCTC 1 cut(s) 1701
Eco57I CTGAAG 2 cut(s) 357, 977
Eco88I CYCGRG 2 cut(s) 1553, 1595
EcoICRI GAGCTC 1 cut(s) 1701
EcoNI CCTNNNNNAGG 1 cut(s) 348
EcoO109I RGGNCCY 1 cut(s) 1476
EcoRII CCWGG 2 cut(s) 99, 1478
EcoT38I GRGCYC 2 cut(s) 1703, 1763
FaeI CATG 8 cut(s) 43, 179, 296, 860, 922, 1204, 1276, 1744
FaqI GGGAC 1 cut(s) 1161
FatI CATG 8 cut(s) 39, 175, 292, 856, 918, 1200, 1272, 1740
FbaI TGATCA 1 cut(s) 429
Fnu4HI GCNGC 8 cut(s) 253, 483, 486, 630, 633, 777, 780, 1351
FokI GGATG 3 cut(s) 221, 1166, 1238
FriOI GRGCYC 2 cut(s) 1703, 1763
Fsp4HI GCNGC 8 cut(s) 253, 483, 486, 630, 633, 777, 780, 1351
FspBI CTAG 5 cut(s) 864, 1211, 1283, 1292, 1575
GluI GCNGC 8 cut(s) 253, 483, 486, 630, 633, 777, 780, 1351
GsaI CCCAGC 1 cut(s) 1766
GsuI CTGGAG 1 cut(s) 170
HaeIII GGCC 5 cut(s) 104, 201, 955, 1483, 1761
Hin1II CATG 8 cut(s) 43, 179, 296, 860, 922, 1204, 1276, 1744
HincII GTYRAC 1 cut(s) 1365
HindII GTYRAC 1 cut(s) 1365
HindIII AAGCTT 1 cut(s) 1333
HphI GGTGA 1 cut(s) 365
Hpy166II GTNNAC 6 cut(s) 500, 647, 794, 853, 1365, 1655
Hpy188I TCNGA 5 cut(s) 871, 940, 1390, 1641, 1705
Hpy188III TCNNGA 5 cut(s) 545, 692, 839, 1016, 1169
Hpy8I GTNNAC 6 cut(s) 500, 647, 794, 853, 1365, 1655
HpyAV CCTTC 8 cut(s) 563, 565, 710, 712, 754, 1022, 1238, 1310
HpyCH4III ACNGT 1 cut(s) 50
HpyCH4IV ACGT 1 cut(s) 1495
HpyF10VI GCNNNNNNNGC 1 cut(s) 1758
HpyF3I CTNAG 6 cut(s) 404, 939, 1028, 1354, 1428, 1697
HpySE526I ACGT 1 cut(s) 1495
Hsp92II CATG 8 cut(s) 43, 179, 296, 860, 922, 1204, 1276, 1744
Ksp22I TGATCA 1 cut(s) 429
Kzo9I GATC 9 cut(s) 65, 429, 547, 694, 841, 1031, 1150, 1294, 1519
LguI GCTCTTC 1 cut(s) 186
LmnI GCTCC 2 cut(s) 146, 1666
Lsp1109I GCAGC 8 cut(s) 239, 472, 494, 619, 641, 766, 788, 1362
LweI GCATC 1 cut(s) 850
MaeI CTAG 5 cut(s) 864, 1211, 1283, 1292, 1575
MaeII ACGT 1 cut(s) 1495
MaeIII GTNAC 5 cut(s) 295, 1007, 1213, 1285, 1299
MalI GATC 9 cut(s) 67, 431, 549, 696, 843, 1033, 1152, 1296, 1521
MboI GATC 9 cut(s) 65, 429, 547, 694, 841, 1031, 1150, 1294, 1519
MboII GAAGA 9 cut(s) 22, 173, 891, 1044, 1055, 1092, 1183, 1221, 1255
MfeI CAATTG 4 cut(s) 461, 608, 755, 1382
MflI RGATCY 3 cut(s) 65, 1294, 1519
MhlI GDGCHC 2 cut(s) 1703, 1763
MlsI TGGCCA 2 cut(s) 955, 1483
MluNI TGGCCA 2 cut(s) 955, 1483
MlyI GAGTC 5 cut(s) 221, 466, 613, 760, 1397
MmeI TCCRAC 2 cut(s) 115, 168
Mox20I TGGCCA 2 cut(s) 955, 1483
MscI TGGCCA 2 cut(s) 955, 1483
MseI TTAA 7 cut(s) 347, 965, 1047, 1095, 1410, 1508, 1530
MslI CAYNNNNRTG 2 cut(s) 1199, 1271
Msp20I TGGCCA 2 cut(s) 955, 1483
MspA1I CMGCKG 3 cut(s) 485, 632, 779
MspR9I CCNGG 2 cut(s) 101, 1480
MunI CAATTG 4 cut(s) 461, 608, 755, 1382
Mva1269I GAATGC 1 cut(s) 73
MvaI CCWGG 2 cut(s) 101, 1480
MwoI GCNNNNNNNGC 1 cut(s) 1758
NdeII GATC 9 cut(s) 65, 429, 547, 694, 841, 1031, 1150, 1294, 1519
NlaIII CATG 8 cut(s) 43, 179, 296, 860, 922, 1204, 1276, 1744
NlaIV GGNNCC 4 cut(s) 582, 729, 1477, 1761
NmuCI GTSAC 2 cut(s) 295, 1299
NspI RCATGY 4 cut(s) 179, 1204, 1276, 1744
NspV TTCGAA 1 cut(s) 1232
PaeI GCATGC 2 cut(s) 1204, 1276
PceI AGGCCT 1 cut(s) 201
PciSI GCTCTTC 1 cut(s) 186
PcsI WCGNNNNNNNCGW 1 cut(s) 846
PctI GAATGC 1 cut(s) 73
PfeI GAWTC 6 cut(s) 1234, 1306, 1358, 1628, 1711, 1779
PkrI GCNGC 8 cut(s) 254, 484, 487, 631, 634, 778, 781, 1352
PleI GAGTC 5 cut(s) 220, 465, 612, 759, 1397
PpsI GAGTC 5 cut(s) 220, 465, 612, 759, 1397
PpuMI RGGWCCY 1 cut(s) 1476
PshBI ATTAAT 2 cut(s) 1047, 1530
PsiI TTATAA 1 cut(s) 411
Psp124BI GAGCTC 1 cut(s) 1703
Psp1406I AACGTT 1 cut(s) 1495
Psp5II RGGWCCY 1 cut(s) 1476
Psp6I CCWGG 2 cut(s) 99, 1478
PspFI CCCAGC 1 cut(s) 1762
PspGI CCWGG 2 cut(s) 99, 1478
PspN4I GGNNCC 4 cut(s) 582, 729, 1477, 1761
PspOMI GGGCCC 1 cut(s) 1759
PspPI GGNCC 8 cut(s) 103, 400, 500, 647, 794, 1476, 1759, 1760
PspPPI RGGWCCY 1 cut(s) 1476
PstI CTGCAG 1 cut(s) 17
PstNI CAGNNNCTG 3 cut(s) 488, 635, 782
PsuI RGATCY 3 cut(s) 65, 1294, 1519
PvuII CAGCTG 3 cut(s) 485, 632, 779
RsaI GTAC 1 cut(s) 1551
RsaNI GTAC 1 cut(s) 1550
RseI CAYNNNNRTG 2 cut(s) 1199, 1271
SacI GAGCTC 1 cut(s) 1703
SapI GCTCTTC 1 cut(s) 186
SaqAI TTAA 7 cut(s) 347, 965, 1047, 1095, 1410, 1508, 1530
SatI GCNGC 8 cut(s) 253, 483, 486, 630, 633, 777, 780, 1351
Sau3AI GATC 9 cut(s) 65, 429, 547, 694, 841, 1031, 1150, 1294, 1519
Sau96I GGNCC 8 cut(s) 103, 400, 500, 647, 794, 1476, 1759, 1760
SchI GAGTC 5 cut(s) 221, 466, 613, 760, 1397
ScrFI CCNGG 2 cut(s) 101, 1480
SduI GDGCHC 2 cut(s) 1703, 1763
SfaNI GCATC 1 cut(s) 850
SfcI CTRYAG 1 cut(s) 13
SfuI TTCGAA 1 cut(s) 1232
SinI GGWCC 5 cut(s) 400, 500, 647, 794, 1476
SmiMI CAYNNNNRTG 2 cut(s) 1199, 1271
SmlI CTYRAG 3 cut(s) 878, 904, 1439
SmoI CTYRAG 3 cut(s) 878, 904, 1439
SphI GCATGC 2 cut(s) 1204, 1276
SseBI AGGCCT 1 cut(s) 201
SspI AATATT 1 cut(s) 1107
SspMI CTAG 5 cut(s) 864, 1211, 1283, 1292, 1575
SstI GAGCTC 1 cut(s) 1703
StuI AGGCCT 1 cut(s) 201
StyD4I CCNGG 2 cut(s) 99, 1478
TaaI ACNGT 1 cut(s) 50
TaiI ACGT 1 cut(s) 1498
TaqI TCGA 3 cut(s) 840, 1170, 1232
TfiI GAWTC 6 cut(s) 1234, 1306, 1358, 1628, 1711, 1779
Tru1I TTAA 7 cut(s) 347, 965, 1047, 1095, 1410, 1508, 1530
Tru9I TTAA 7 cut(s) 347, 965, 1047, 1095, 1410, 1508, 1530
TscAI CASTG 5 cut(s) 502, 649, 796, 1010, 1618
TseFI GTSAC 2 cut(s) 295, 1299
TseI GCWGC 8 cut(s) 252, 482, 485, 629, 632, 776, 779, 1350
Tsp45I GTSAC 2 cut(s) 295, 1299
TspDTI ATGAA 3 cut(s) 433, 580, 727
TspGWI ACGGA 2 cut(s) 838, 1318
TspRI CASTG 5 cut(s) 502, 649, 796, 1010, 1618
VpaK11BI GGWCC 5 cut(s) 400, 500, 647, 794, 1476
VspI ATTAAT 2 cut(s) 1047, 1530
XagI CCTNNNNNAGG 1 cut(s) 348
XapI RAATTY 4 cut(s) 587, 734, 931, 1583
XceI RCATGY 4 cut(s) 179, 1204, 1276, 1744
XspI CTAG 5 cut(s) 864, 1211, 1283, 1292, 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.