Rw7G019930

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
22258229 .. 22261180
2952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019930.1

Sequence Viewer

Length: 2952 bp
ATGAGTGGTGGGTCTATGCATTCTGGTTTGGTTGGGCTTGTGTGCATGGCCATTGCCTCTGCTATTTGTTGTTCTAGTGTTGGAAGCTCCAGCAACATCATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGACTCCAATGCTCTTGCCTCTTGGAAAAATGAGGAGAAAGATTGCTGCAAGTGGAGAGGAATAGAATGCAACAACCAAACAGGTCATGTTACCAGTCTTGATTTCTCCTTTAATTATGATGCATATTTCAGTTCTGCTGAAGCTCCTTTAAGTGGTGAAATTAGTCCTTCACTACTTGAATTGAGATATCTAAATTACTTGGACCTCAGTTATATTGATTTTGGAGAAATTCTGATTCCCAAGTTCATTGGCTCTTTGACTCAATTGAAAGAACTCAAACTTGCATATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCGCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTTAGTCAATTGAAAGAACTCAAACTTGCAGGTGCTAATTTCAGTGGACCTGTTCCTCCTCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTACGGTAACGAAGTTGTTAGTTTTGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCATATCTAGATTTGTCAAAGGTCATGAATTGGCCACTATCTTTAAGCAAGCTCACTTTACTAACAGAGCTTCAGTTATCCCAGTGTAACCTTCCTAATATCAATCTAAGATCACTTTCCTTTATTAATTCCTCCACCTCTCTTCAAATTCTTCACCTCTCTGTGAACTCTCTTAATTCTTCAATATTTTATTGGATAGCCAATGTCAGCAGCAATTTTGTCCATATTGATCTCTCTTCCAACAATCTCAAAGGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTAGATCTGTCTGAGAATCAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTATGGTCAAACCAATTGTCTGAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGAGACCTTGGACTTGGGTGCTAACTGGTTTTGGGGGTCATGGCCAGATTTGAAACATTTTTCGAAGTTAAGAGAGTTATATCTTGACAGCAATCAAGTAAATGGGTCTCTACGCGAAAGTGTCGGGCAACTCTCTAGCCTTGAAACATTATTTCTCTCCGGGAATTCTTTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTCTATGGGCTTTAAGTCTTTCTGATAATCGTTTCTCTATCAACCTGAGCTCTGATTGGAATCCACCATTTCAACTCACTACGTTATACATGTCCTCTTGCAAGGTGGGCCCAACTTTTCTCAAGTGGATTCTAACGCAGACAAATCTTACCGCTCTTTATCTCTCTAATGCTGGACTATCAGGATCATTACCTAATAAGTTTTGGGATCTATTTTCTCGCTTATCTGACTTAGATCTCTCTATGAACCAAATCCATGGAAAACTGCCGAATCTGTCATCGACAAGTTTAAGTTATGTTAACTTGTCTTCTAATCTATTTTATGGCGCATTGCCATCATTTTCTCCTATGCTACAAAACCTGTATCTCTCGAATAATAGGTTTTCAGGACCTTTGTCTTCCTTCTGTGCAACGCAGGCTCCAAATTTGGAGTATCTTGACATTTCTAAGAACCTATTGTCTGGAGAGCTTCCTAATTGTTGGATGCAATTTCAAGAATTGCAAGTGTTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTCTTTAGGCAATCTACAGGGAATTCAAGTATTGCGTTTACATGATAACAATTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCCGATTATTGATGGTTGATCTTGGCAACAATAACTTGTCGGGAAAGATACCAACATGGATTGGCCAAAGCCTACCAAACTTGTGGACTCTACGCTTACGGTCAAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCAGTCTAGCTGCCATTCATGTTTTGGACCTCTCTCACAACAGTATTTCAGGAGGCTTGCCACATTGCTTCAATAACATAACCGCTTTGGCTGATGATTCGGGAGTTTATAGTATTATTTATGGTGGAATTGTGGAACTTGTGTGGAAAGGAAAAGAAAGAGAGTATGGGGAAAATCTTGACCGTATGAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGGAAATTCCGCCAAGTATAGCAAGTATGACTGAGTTGATTTCTCTGAACCTGTCTAGAAACAAATTGACAGGAAAGCTTCCTGAAGACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCGGATGTCTGGTAAAATTCCTACAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCACGCAACAACTTGTCAGGAAGAATTCCATTAGGCACCCAACTTCAGAGTTTCAATGCTTCTCAATATATGGGAAATCTTGGACTTTGTGGACCACCGCTGACACAAAGTTGTCCAGGAGATGGAACAGTTCAAGATGATGGAATCGTGAGAGGAACTGAAATTGATAACAAAGAACAGGTTAGTGATGGTCTCAACCTTGGATTCTTTATTAGTGCAGTGCTGGGATTTGTCATTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTAAGACTTCTCGGAGAAATGCTTATTTCAGATTCCTGGACAATGCAAATGATTGGATTTATGTCAAAACCAAGGCAAAAGTGCGGAGGACACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

983

Amino Acids

108.56

Weight (kDa)

5.45

Isoelectric Point (pI)

38.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 76 1.9e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 105 - 350 4.9e-18 Leucine-rich repeat region
LRR_8 PF13855 319 - 375 2.1e-08 Leucine rich repeat
LRR_8 PF13855 415 - 475 2.2e-07 Leucine rich repeat
LRR_8 PF13855 581 - 640 3e-06 Leucine rich repeat
LRR_8 PF13855 782 - 840 4.3e-10 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 578
AasI GACNNNNNNGTC 1 cut(s) 1111
Acc36I ACCTGC 1 cut(s) 578
AccB1I GGYRCC 1 cut(s) 2615
AccB7I CCANNNNNTGG 1 cut(s) 2702
AccBSI CCGCTC 1 cut(s) 1544
AccII CGCG 1 cut(s) 1293
AciI CCGC 7 cut(s) 513, 1542, 2244, 2393, 2678, 2835, 2932
AclWI GGATC 2 cut(s) 1582, 1605
AcoI YGGCCR 4 cut(s) 48, 764, 1220, 2086
AcuI CTGAAG 4 cut(s) 315, 788, 2487, 2609
AfaI GTAC 1 cut(s) 2023
AfiI CCNNNNNNNGG 4 cut(s) 308, 476, 623, 2702
AflII CTTAAG 1 cut(s) 2849
AflIII ACRYGT 2 cut(s) 729, 1479
AjnI CCWGG 2 cut(s) 2695, 2883
Alw21I GWGCWC 1 cut(s) 1442
Alw26I GTCTC 3 cut(s) 1175, 1290, 2777
AlwI GGATC 2 cut(s) 1582, 1605
AoxI GGCC 6 cut(s) 48, 145, 764, 1220, 1498, 2086
ApaI GGGCCC 1 cut(s) 1502
ApeKI GCWGC 4 cut(s) 201, 942, 1089, 2171
ArsI GACNNNNNNTTYG 2 cut(s) 1109, 1141
AseI ATTAAT 1 cut(s) 858
AspLEI GCGC 1 cut(s) 1718
AspS9I GGNCC 9 cut(s) 358, 458, 605, 986, 1498, 1499, 1778, 2188, 2672
AsuC2I CCSGG 1 cut(s) 1339
AsuHPI GGTGA 2 cut(s) 323, 878
AsuII TTCGAA 1 cut(s) 1241
AvaII GGWCC 7 cut(s) 358, 458, 605, 986, 1778, 2188, 2672
BaeGI GKGCMC 1 cut(s) 1502
BalI TGGCCA 4 cut(s) 50, 766, 1222, 2088
BanI GGYRCC 1 cut(s) 2615
BanII GRGCYC 2 cut(s) 1442, 1502
BarI GAAGNNNNNNTAC 2 cut(s) 1047, 1079
BbsI GAAGAC 4 cut(s) 994, 1689, 1779, 2475
Bbv12I GWGCWC 1 cut(s) 1442
BbvI GCAGC 4 cut(s) 188, 954, 1101, 2158
BccI CCATC 7 cut(s) 998, 1732, 2029, 2696, 2714, 2762, 2821
BciT130I CCWGG 2 cut(s) 2697, 2885
BciVI GTATCC 1 cut(s) 1056
BcnI CCSGG 1 cut(s) 1339
BcoDI GTCTC 3 cut(s) 1175, 1290, 2777
BfaI CTAG 7 cut(s) 75, 740, 1022, 1031, 1314, 2168, 2439
BfmI CTRYAG 1 cut(s) 1952
BfrI CTTAAG 1 cut(s) 2849
BfuAI ACCTGC 1 cut(s) 578
BfuI GTATCC 1 cut(s) 1056
BglII AGATCT 2 cut(s) 1033, 1624
BisI GCNGC 5 cut(s) 202, 943, 1090, 2172, 2836
BlsI GCNGC 5 cut(s) 203, 944, 1091, 2173, 2837
Bme1390I CCNGG 3 cut(s) 1339, 2697, 2885
Bme18I GGWCC 7 cut(s) 358, 458, 605, 986, 1778, 2188, 2672
BmgT120I GGNCC 9 cut(s) 358, 458, 605, 986, 1498, 1499, 1778, 2188, 2672
BmiI GGNNCC 4 cut(s) 988, 1500, 1809, 2617
BmrFI CCNGG 3 cut(s) 1339, 2697, 2885
BmrI ACTGGG 1 cut(s) 808
BmsI GCATC 2 cut(s) 265, 1863
BmuI ACTGGG 1 cut(s) 808
BoxI GACNNNNGTC 1 cut(s) 1783
BpiI GAAGAC 4 cut(s) 994, 1689, 1779, 2475
BpmI CTGGAG 3 cut(s) 73, 116, 1872
Bpu10I CCTNAGC 1 cut(s) 1436
Bpu14I TTCGAA 1 cut(s) 1241
BpuEI CTTGAG 4 cut(s) 710, 736, 1199, 1496
BpuMI CCSGG 1 cut(s) 1339
BsaBI GATNNNNATC 1 cut(s) 1449
BsaI GGTCTC 3 cut(s) 1175, 1290, 2777
BsaJI CCNNGG 4 cut(s) 1185, 1645, 2779, 2919
BsaWI WCCGGW 1 cut(s) 2517
BsaXI ACNNNNNCTCC 2 cut(s) 1792, 1822
Bsc4I CCNNNNNNNGG 4 cut(s) 308, 476, 623, 2702
Bse1I ACTGG 4 cut(s) 133, 249, 814, 1208
Bse3DI GCAATG 3 cut(s) 51, 1718, 2224
Bse8I GATNNNNATC 1 cut(s) 1449
BseBI CCWGG 2 cut(s) 2697, 2885
BseDI CCNNGG 4 cut(s) 1185, 1645, 2779, 2919
BseGI GGATG 5 cut(s) 160, 990, 1878, 2526, 2832
BseJI GATNNNNATC 1 cut(s) 1449
BseLI CCNNNNNNNGG 4 cut(s) 308, 476, 623, 2702
BseMI GCAATG 3 cut(s) 51, 1718, 2224
BseMII CTCAG 5 cut(s) 376, 1032, 1158, 1427, 2406
BseNI ACTGG 4 cut(s) 133, 249, 814, 1208
BseRI GAGGAG 2 cut(s) 203, 606
BseSI GKGCMC 1 cut(s) 1502
BseXI GCAGC 4 cut(s) 188, 954, 1101, 2158
BseYI CCCAGC 1 cut(s) 2803
BsgI GTGCAG 2 cut(s) 2182, 2817
Bsh1236I CGCG 1 cut(s) 1293
BshFI GGCC 6 cut(s) 50, 147, 766, 1222, 1500, 2088
BshNI GGYRCC 1 cut(s) 2615
BsiHKAI GWGCWC 1 cut(s) 1442
BsiSI CCGG 2 cut(s) 1338, 2518
BslFI GGGAC 1 cut(s) 972
BslI CCNNNNNNNGG 4 cut(s) 308, 476, 623, 2702
BsmAI GTCTC 3 cut(s) 1175, 1290, 2777
BsmFI GGGAC 1 cut(s) 972
BsmI GAATGC 2 cut(s) 19, 227
BsnI GGCC 6 cut(s) 50, 147, 766, 1222, 1500, 2088
Bso31I GGTCTC 3 cut(s) 1175, 1290, 2777
Bsp119I TTCGAA 1 cut(s) 1241
Bsp120I GGGCCC 1 cut(s) 1498
Bsp1286I GDGCHC 2 cut(s) 1442, 1502
Bsp143I GATC 9 cut(s) 505, 652, 842, 961, 1033, 1574, 1597, 1624, 2041
Bsp19I CCATGG 1 cut(s) 1645
BspACI CCGC 7 cut(s) 513, 1542, 2244, 2393, 2678, 2835, 2932
BspANI GGCC 6 cut(s) 50, 147, 766, 1222, 1500, 2088
BspCNI CTCAG 5 cut(s) 375, 1033, 1159, 1428, 2407
BspFNI CGCG 1 cut(s) 1293
BspHI TCATGA 1 cut(s) 756
BspLI GGNNCC 4 cut(s) 988, 1500, 1809, 2617
BspMI ACCTGC 1 cut(s) 578
BspPI GGATC 2 cut(s) 1582, 1605
BspQI GCTCTTC 1 cut(s) 132
BspT104I TTCGAA 1 cut(s) 1241
BspT107I GGYRCC 1 cut(s) 2615
BspTI CTTAAG 1 cut(s) 2849
BspTNI GGTCTC 3 cut(s) 1175, 1290, 2777
BsrBI CCGCTC 1 cut(s) 1544
BsrDI GCAATG 3 cut(s) 51, 1718, 2224
BsrI ACTGG 4 cut(s) 133, 249, 814, 1208
BssECI CCNNGG 4 cut(s) 1185, 1645, 2779, 2919
BssMI GATC 9 cut(s) 505, 652, 842, 961, 1033, 1574, 1597, 1624, 2041
BssT1I CCWWGG 4 cut(s) 1185, 1645, 2779, 2919
Bst2UI CCWGG 2 cut(s) 2697, 2885
Bst4CI ACNGT 6 cut(s) 662, 2021, 2124, 2204, 2345, 2710
Bst6I CTCTTC 3 cut(s) 132, 879, 973
BstAFI CTTAAG 1 cut(s) 2849
BstBI TTCGAA 1 cut(s) 1241
BstC8I GCNNGC 6 cut(s) 123, 782, 1013, 1806, 2219, 2551
BstDSI CCRYGG 1 cut(s) 1645
BstF5I GGATG 5 cut(s) 160, 990, 1878, 2526, 2832
BstFNI CGCG 1 cut(s) 1293
BstHHI GCGC 1 cut(s) 1718
BstKTI GATC 9 cut(s) 508, 655, 845, 964, 1036, 1577, 1600, 1627, 2044
BstMAI GTCTC 3 cut(s) 1175, 1290, 2777
BstMBI GATC 9 cut(s) 505, 652, 842, 961, 1033, 1574, 1597, 1624, 2041
BstMWI GCNNNNNNNGC 3 cut(s) 1497, 1805, 1944
BstNI CCWGG 2 cut(s) 2697, 2885
BstNSI RCATGY 4 cut(s) 125, 733, 1015, 1483
BstPAI GACNNNNGTC 1 cut(s) 1783
BstSCI CCNGG 3 cut(s) 1337, 2695, 2883
BstSFI CTRYAG 1 cut(s) 1952
BstSLI GKGCMC 1 cut(s) 1502
BstUI CGCG 1 cut(s) 1293
BstV1I GCAGC 4 cut(s) 188, 954, 1101, 2158
BstV2I GAAGAC 4 cut(s) 994, 1689, 1779, 2475
BstX2I RGATCY 3 cut(s) 1033, 1597, 1624
BstXI CCANNNNNNTGG 2 cut(s) 1646, 2106
BstYI RGATCY 3 cut(s) 1033, 1597, 1624
BsuI GTATCC 1 cut(s) 1056
BsuRI GGCC 6 cut(s) 50, 147, 766, 1222, 1500, 2088
BtgI CCRYGG 1 cut(s) 1645
BtsCI GGATG 5 cut(s) 160, 990, 1878, 2526, 2832
BtsI GCAGTG 1 cut(s) 2805
BtsIMutI CAGTG 4 cut(s) 460, 607, 821, 2805
BveI ACCTGC 1 cut(s) 578
Cac8I GCNNGC 6 cut(s) 123, 782, 1013, 1806, 2219, 2551
CciI TCATGA 1 cut(s) 756
CfoI GCGC 1 cut(s) 1718
Cfr13I GGNCC 9 cut(s) 358, 458, 605, 986, 1498, 1499, 1778, 2188, 2672
Csp6I GTAC 1 cut(s) 2022
CviQI GTAC 1 cut(s) 2022
DpnI GATC 9 cut(s) 507, 654, 844, 963, 1035, 1576, 1599, 1626, 2043
DpnII GATC 9 cut(s) 505, 652, 842, 961, 1033, 1574, 1597, 1624, 2041
DrdI GACNNNNNNGTC 1 cut(s) 1111
DseDI GACNNNNNNGTC 1 cut(s) 1111
EaeI YGGCCR 4 cut(s) 48, 764, 1220, 2086
Eam1104I CTCTTC 3 cut(s) 132, 879, 973
EarI CTCTTC 3 cut(s) 132, 879, 973
EciI GGCGGA 2 cut(s) 502, 2382
Ecl136II GAGCTC 1 cut(s) 1440
Eco130I CCWWGG 4 cut(s) 1185, 1645, 2779, 2919
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 2 cut(s) 1442, 1502
Eco31I GGTCTC 3 cut(s) 1175, 1290, 2777
Eco32I GATATC 1 cut(s) 344
Eco47I GGWCC 7 cut(s) 358, 458, 605, 986, 1778, 2188, 2672
Eco53kI GAGCTC 1 cut(s) 1440
Eco57I CTGAAG 4 cut(s) 315, 788, 2487, 2609
EcoICRI GAGCTC 1 cut(s) 1440
EcoO109I RGGNCCY 2 cut(s) 986, 1778
EcoRI GAATTC 3 cut(s) 1342, 1959, 2604
EcoRII CCWGG 2 cut(s) 2695, 2883
EcoRV GATATC 1 cut(s) 344
EcoT14I CCWWGG 4 cut(s) 1185, 1645, 2779, 2919
EcoT22I ATGCAT 2 cut(s) 21, 280
EcoT38I GRGCYC 2 cut(s) 1442, 1502
ErhI CCWWGG 4 cut(s) 1185, 1645, 2779, 2919
FaqI GGGAC 1 cut(s) 972
FauNDI CATATG 1 cut(s) 442
Fnu4HI GCNGC 5 cut(s) 202, 943, 1090, 2172, 2836
FokI GGATG 5 cut(s) 167, 977, 1885, 2533, 2839
FriOI GRGCYC 2 cut(s) 1442, 1502
Fsp4HI GCNGC 5 cut(s) 202, 943, 1090, 2172, 2836
FspBI CTAG 7 cut(s) 75, 740, 1022, 1031, 1314, 2168, 2439
GlaI GCGC 1 cut(s) 1717
GluI GCNGC 5 cut(s) 202, 943, 1090, 2172, 2836
GsaI CCCAGC 1 cut(s) 2807
GsuI CTGGAG 3 cut(s) 73, 116, 1872
HaeIII GGCC 6 cut(s) 50, 147, 766, 1222, 1500, 2088
HapII CCGG 2 cut(s) 1338, 2518
HhaI GCGC 1 cut(s) 1718
Hin6I GCGC 1 cut(s) 1716
HinP1I GCGC 1 cut(s) 1716
HincII GTYRAC 2 cut(s) 1104, 1690
HindII GTYRAC 2 cut(s) 1104, 1690
HindIII AAGCTT 1 cut(s) 2459
HpaI GTTAAC 1 cut(s) 1690
HpaII CCGG 2 cut(s) 1338, 2518
HphI GGTGA 2 cut(s) 323, 878
Hpy166II GTNNAC 9 cut(s) 458, 605, 898, 1104, 1690, 1976, 2109, 2672, 2843
Hpy8I GTNNAC 9 cut(s) 458, 605, 898, 1104, 1690, 1976, 2109, 2672, 2843
HpyAV CCTTC 7 cut(s) 333, 521, 833, 1049, 1801, 2016, 2161
HpyCH4III ACNGT 6 cut(s) 662, 2021, 2124, 2204, 2345, 2710
HpyCH4IV ACGT 1 cut(s) 1472
HpyF10VI GCNNNNNNNGC 3 cut(s) 1497, 1805, 1944
HpySE526I ACGT 1 cut(s) 1472
HspAI GCGC 1 cut(s) 1716
KspAI GTTAAC 1 cut(s) 1690
Kzo9I GATC 9 cut(s) 505, 652, 842, 961, 1033, 1574, 1597, 1624, 2041
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 3 cut(s) 92, 304, 1813
Lsp1109I GCAGC 4 cut(s) 188, 954, 1101, 2158
LweI GCATC 2 cut(s) 265, 1863
MaeI CTAG 7 cut(s) 75, 740, 1022, 1031, 1314, 2168, 2439
MaeII ACGT 1 cut(s) 1472
MaeIII GTNAC 5 cut(s) 244, 662, 818, 1024, 2477
MalI GATC 9 cut(s) 507, 654, 844, 963, 1035, 1576, 1599, 1626, 2043
MbiI CCGCTC 1 cut(s) 1544
MboI GATC 9 cut(s) 505, 652, 842, 961, 1033, 1574, 1597, 1624, 2041
MfeI CAATTG 3 cut(s) 419, 566, 1121
MflI RGATCY 3 cut(s) 1033, 1597, 1624
MhlI GDGCHC 2 cut(s) 1442, 1502
MlsI TGGCCA 4 cut(s) 50, 766, 1222, 2088
MluNI TGGCCA 4 cut(s) 50, 766, 1222, 2088
MlyI GAGTC 5 cut(s) 152, 409, 1106, 1136, 2104
MmeI TCCRAC 4 cut(s) 61, 996, 1850, 2472
Mox20I TGGCCA 4 cut(s) 50, 766, 1222, 2088
Mph1103I ATGCAT 2 cut(s) 21, 280
MscI TGGCCA 4 cut(s) 50, 766, 1222, 2088
MslI CAYNNNNRTG 2 cut(s) 1010, 2486
Msp20I TGGCCA 4 cut(s) 50, 766, 1222, 2088
MspA1I CMGCKG 1 cut(s) 2680
MspCI CTTAAG 1 cut(s) 2849
MspI CCGG 2 cut(s) 1338, 2518
MspR9I CCNGG 3 cut(s) 1339, 2697, 2885
MunI CAATTG 3 cut(s) 419, 566, 1121
Mva1269I GAATGC 2 cut(s) 19, 227
MvaI CCWGG 2 cut(s) 2697, 2885
MvnI CGCG 1 cut(s) 1293
MwoI GCNNNNNNNGC 3 cut(s) 1497, 1805, 1944
NciI CCSGG 1 cut(s) 1339
NcoI CCATGG 1 cut(s) 1645
NdeI CATATG 1 cut(s) 442
NdeII GATC 9 cut(s) 505, 652, 842, 961, 1033, 1574, 1597, 1624, 2041
NlaIV GGNNCC 4 cut(s) 988, 1500, 1809, 2617
NsiI ATGCAT 2 cut(s) 21, 280
NspI RCATGY 4 cut(s) 125, 733, 1015, 1483
NspV TTCGAA 1 cut(s) 1241
PaeI GCATGC 2 cut(s) 125, 1015
PagI TCATGA 1 cut(s) 756
PaqCI CACCTGC 1 cut(s) 578
PceI AGGCCT 1 cut(s) 147
PciI ACATGT 2 cut(s) 729, 1479
PciSI GCTCTTC 1 cut(s) 132
PctI GAATGC 2 cut(s) 19, 227
PflMI CCANNNNNTGG 1 cut(s) 2702
PfoI TCCNGGA 3 cut(s) 1337, 2695, 2883
PkrI GCNGC 5 cut(s) 203, 944, 1091, 2173, 2837
PleI GAGTC 5 cut(s) 152, 409, 1105, 1136, 2104
PpsI GAGTC 5 cut(s) 152, 409, 1105, 1136, 2104
PpuMI RGGWCCY 2 cut(s) 986, 1778
PscI ACATGT 2 cut(s) 729, 1479
PshAI GACNNNNGTC 1 cut(s) 1783
PshBI ATTAAT 1 cut(s) 858
Psp124BI GAGCTC 1 cut(s) 1442
Psp5II RGGWCCY 2 cut(s) 986, 1778
Psp6I CCWGG 2 cut(s) 2695, 2883
PspFI CCCAGC 1 cut(s) 2803
PspGI CCWGG 2 cut(s) 2695, 2883
PspN4I GGNNCC 4 cut(s) 988, 1500, 1809, 2617
PspOMI GGGCCC 1 cut(s) 1498
PspPI GGNCC 9 cut(s) 358, 458, 605, 986, 1498, 1499, 1778, 2188, 2672
PspPPI RGGWCCY 2 cut(s) 986, 1778
PsuI RGATCY 3 cut(s) 1033, 1597, 1624
RsaI GTAC 1 cut(s) 2023
RsaNI GTAC 1 cut(s) 2022
RseI CAYNNNNRTG 2 cut(s) 1010, 2486
SacI GAGCTC 1 cut(s) 1442
SapI GCTCTTC 1 cut(s) 132
SatI GCNGC 5 cut(s) 202, 943, 1090, 2172, 2836
Sau3AI GATC 9 cut(s) 505, 652, 842, 961, 1033, 1574, 1597, 1624, 2041
Sau96I GGNCC 9 cut(s) 358, 458, 605, 986, 1498, 1499, 1778, 2188, 2672
SchI GAGTC 5 cut(s) 152, 409, 1106, 1136, 2104
ScrFI CCNGG 3 cut(s) 1339, 2697, 2885
SduI GDGCHC 2 cut(s) 1442, 1502
SfaNI GCATC 2 cut(s) 265, 1863
SfcI CTRYAG 1 cut(s) 1952
SfuI TTCGAA 1 cut(s) 1241
SinI GGWCC 7 cut(s) 358, 458, 605, 986, 1778, 2188, 2672
SmiMI CAYNNNNRTG 2 cut(s) 1010, 2486
SmlI CTYRAG 5 cut(s) 689, 715, 1178, 1511, 2849
SmoI CTYRAG 5 cut(s) 689, 715, 1178, 1511, 2849
SphI GCATGC 2 cut(s) 125, 1015
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 7 cut(s) 513, 1542, 2244, 2393, 2678, 2835, 2932
SspI AATATT 1 cut(s) 918
SspMI CTAG 7 cut(s) 75, 740, 1022, 1031, 1314, 2168, 2439
SstI GAGCTC 1 cut(s) 1442
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 3 cut(s) 1337, 2695, 2883
StyI CCWWGG 4 cut(s) 1185, 1645, 2779, 2919
TaaI ACNGT 6 cut(s) 662, 2021, 2124, 2204, 2345, 2710
TaiI ACGT 1 cut(s) 1475
TaqI TCGA 3 cut(s) 1241, 1670, 1760
TauI GCSGC 1 cut(s) 2838
TscAI CASTG 4 cut(s) 460, 607, 821, 2805
TseI GCWGC 4 cut(s) 201, 942, 1089, 2171
TspDTI ATGAA 6 cut(s) 391, 538, 773, 1649, 2168, 2498
TspRI CASTG 4 cut(s) 460, 607, 821, 2805
Van91I CCANNNNNTGG 1 cut(s) 2702
Vha464I CTTAAG 1 cut(s) 2849
VpaK11BI GGWCC 7 cut(s) 358, 458, 605, 986, 1778, 2188, 2672
VspI ATTAAT 1 cut(s) 858
XbaI TCTAGA 2 cut(s) 739, 2438
XceI RCATGY 4 cut(s) 125, 733, 1015, 1483
XcmI CCANNNNNNNNNTGG 1 cut(s) 2182
XspI CTAG 7 cut(s) 75, 740, 1022, 1031, 1314, 2168, 2439
Zsp2I ATGCAT 2 cut(s) 21, 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.