RLG00000029325

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
36566770 .. 36569541
2772 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029325

Sequence Viewer

Length: 2466 bp
ATGAGTGGTAGGTCTATGCATTCTGTTTTGGTTGGGCTTGTGTGCCTGGCCATTGCCTCTGCTATTTGTTGTTCAAGTGTTGGAAGCTCCAACAACATCATGTGCTTAGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGAGTCCAATGCTCTTGCTTCTTGGAAAAGTGAGCAAGATTGCTGCAAGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTCATCACTCTAGATCTCTCTTATATTTATGATGTCGATTCCACTGAATTGAGAGGTGAAATTAGTCCTTCACTACTTGAATTGCGATATCTAAATTACTTGGATCTCAGTTATAATGATTTTGGAGGAATGATCATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAACTAAGACTCATACAAGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTGATTTGCACACTCTTGATCTTTCCTCAAACAGATATGTTCGTTCAGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGTACATGTCATGGCTGAATTTGTCCAAGGCTATGAATTGGCCACAATCTTTAAGCAAGCTCACTTTACTGACAGAACTTCAGTTATCCGAGTGTCACCTTCCTGATGTCAATCTAAGATCACTTTCCTTTATTAATTCTTCCACCTCTTTTCAACTCCTTGACCTCTCTTCTAACTCTCTTAATTCCTCAGTATTTTATTGGATAGCCAATGTCAGCAGCAACTTTGTCCATATTGATCTCTCTTTAAACAAACTTGAAGGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTAGATCTGTCACGGAATCAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTATATTCAAACCAATTGTCTGAAAACTTTGAGGACTTTGTTAAAACATTGTCTTGTGCTCATAACACACTTGACACCTTGTTCTTGGGTTATAACCAATTTTGGGGGTCGTTGCCAGATTTGGTATGTTTTTCAAATTTAAGAGTGTTACGTCTTGCCAGTAATCAGCTAAATGGGTCTCTACCAGAGAGTGTTGGGCAACTCTCTAGCCTTGAAGTCTTACTTCTCAGAGATAATTCTTTGACTGGTGTCATAACAGAATCACACTTTCTGAACCTCTCCCGTTTACAGACTTTGGATATTTCTGGTAATCGTTTCTCTATCAACCTAAGCTCTGATTGGAATCCACCATTTCAACTTACTAGCATGTTAGATATGTCCTCTTGCAAGGTGGGCCCAGCTTTTCCCAAATGGATTCTAACACAGACGAATCTTATCATGCTTCATCTTTCTAATGCTGGACTATCAAGATCATTGCCTAATGAGTTTTGGGATCTATTTTCTGGCTTATCTCAATTAGATCTCTCTAGGAACCAAATCCATGGAAAACTGCCGAATCTGTCAACAACAAGCTTGGGTTTTCTCAACTTGTCTTCTAATCTACTTTCTGGTGCAGTGCCATCATTTTCTCCTATGCTCACAAACTTGTATCTCTCTAATAACATGTTTTCTGAGCCGCTGTCTTCCTTCTGTGCAACGCAGGCTCCACATTTGAGTATCATTGATATTTCTGAGAACCTATTGTCTGGAGAGCTTCCTAATTGTTGGATGCAATTTCAAGAATTGCAAGTATTGAAATTGGAAAAAAATAAATTATCTGGAAAAATACCAAGCTCTTTAGGCAATCTACAGAGACTTGTGTTATTGCTTTTAAATGAACTCGTGTGGAAAGGAATAGAGATTGAGTTCGGGAACAATCTTTGGCATTTGAGAAGCATTGACATTTCAAGCAATTCTTTTGTTGGGGAAATTCCAGAAAGCATCACGAGTATGCAAAACTTGATTTCTCTAAACCTCTCAAGAAACAGATTTACAGGAAAGCTTCCTGAAAACTTCGGTAACCTGAAGAAGTTAGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTCAAATTCCTTTCAGTTTTTCGAGTTTGAATTTTCTTGGAGTCTTGGACTTGTCATACAACCAATTGTCCGGAAGAATTCCACCAAGCACCCAACTTCAGAGTTTCAATGCTTCTAAATATATGGGAAATCTTGGACTCTGCGGACCACCACTCTCACCAAATTGCCCTGGAGATGAAACAACTGAAGATGATCATAACAAGCAACATGATAATGATGGCCTCAAAAGCTTGGGATTCCTTATCAGTACAGTGTTGGGATTCATCTCTGGGTTTTGGATAGTCTGCGGAAGTTTATTGCTTAAGAGTTCTTGGAGATATGCTTATTTCAAATTCCTGGACAATGCAAAAGACTGGATTTATGTCAAAGCTGTTGTCTACAAAGCAAAACTGCAGAGGAGGCTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

822

Amino Acids

91.58

Weight (kDa)

5.8

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 75 5.6e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 100 - 296 9.3e-11 Leucine-rich repeat region
LRR_8 PF13855 265 - 321 1.8e-07 Leucine rich repeat
LRR_8 PF13855 360 - 421 2.9e-07 Leucine rich repeat
LRR_14 PF23598 619 - 702 1.9e-06 Leucine-rich repeat region
LRR_8 PF13855 624 - 683 1.6e-10 Leucine rich repeat
LRR_4 PF12799 647 - 684 3.1e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 354, 1038
AccI GTMKAC 1 cut(s) 2430
AccIII TCCGGA 1 cut(s) 2123
AciI CCGC 3 cut(s) 1622, 2196, 2340
AclWI GGATC 2 cut(s) 351, 1446
AcoI YGGCCR 2 cut(s) 48, 602
AcsI RAATTY 7 cut(s) 580, 1081, 1914, 2058, 2083, 2130, 2384
AcuI CTGAAG 4 cut(s) 626, 2030, 2135, 2259
AfaI GTAC 2 cut(s) 566, 2302
AfiI CCNNNNNNNGG 2 cut(s) 461, 1048
AflII CTTAAG 1 cut(s) 2354
AflIII ACRYGT 2 cut(s) 567, 1608
AjnI CCWGG 3 cut(s) 45, 2221, 2388
Alw21I GWGCWC 1 cut(s) 1006
Alw26I GTCTC 2 cut(s) 1128, 1792
AlwI GGATC 2 cut(s) 351, 1446
Aor13HI TCCGGA 1 cut(s) 2123
AoxI GGCC 5 cut(s) 48, 145, 602, 1339, 2272
ApaI GGGCCC 1 cut(s) 1343
ApeKI GCWGC 3 cut(s) 198, 780, 927
ApoI RAATTY 7 cut(s) 580, 1081, 1914, 2058, 2083, 2130, 2384
ArsI GACNNNNNNTTYG 4 cut(s) 947, 979, 2412, 2444
AseI ATTAAT 1 cut(s) 696
AspS9I GGNCC 5 cut(s) 443, 824, 1339, 1340, 2198
AsuHPI GGTGA 3 cut(s) 308, 650, 2202
AvaII GGWCC 3 cut(s) 443, 824, 2198
BaeGI GKGCMC 1 cut(s) 1343
BalI TGGCCA 2 cut(s) 50, 604
BanII GRGCYC 1 cut(s) 1343
BarI GAAGNNNNNNTAC 2 cut(s) 885, 917
BauI CACGAG 2 cut(s) 1826, 1930
BbsI GAAGAC 3 cut(s) 832, 1530, 1620
Bbv12I GWGCWC 1 cut(s) 1006
BbvI GCAGC 3 cut(s) 185, 792, 939
BccI CCATC 3 cut(s) 836, 1573, 2264
BciT130I CCWGG 3 cut(s) 47, 2223, 2390
BciVI GTATCC 1 cut(s) 894
BclI TGATCA 2 cut(s) 372, 2245
BcoDI GTCTC 2 cut(s) 1128, 1792
BfaI CTAG 6 cut(s) 251, 860, 869, 1152, 1308, 1473
BfmI CTRYAG 2 cut(s) 1793, 2444
BfrI CTTAAG 1 cut(s) 2354
BfuI GTATCC 1 cut(s) 894
BglII AGATCT 3 cut(s) 253, 871, 1465
BisI GCNGC 4 cut(s) 199, 781, 928, 1622
BlsI GCNGC 4 cut(s) 200, 782, 929, 1623
Bme1390I CCNGG 3 cut(s) 47, 2223, 2390
Bme18I GGWCC 3 cut(s) 443, 824, 2198
BmgT120I GGNCC 5 cut(s) 443, 824, 1339, 1340, 2198
BmiI GGNNCC 4 cut(s) 826, 1341, 1478, 1650
BmrFI CCNGG 3 cut(s) 47, 2223, 2390
BmsI GCATC 2 cut(s) 1704, 1935
BoxI GACNNNNGTC 1 cut(s) 1193
BpiI GAAGAC 3 cut(s) 832, 1530, 1620
BpmI CTGGAG 3 cut(s) 116, 1713, 2244
Bpu10I CCTNAGC 1 cut(s) 1274
BpuEI CTTGAG 3 cut(s) 548, 574, 1948
BsaBI GATNNNNATC 2 cut(s) 672, 1287
BsaI GGTCTC 1 cut(s) 1128
BsaJI CCNNGG 3 cut(s) 588, 1486, 2221
BsaWI WCCGGW 1 cut(s) 2123
BsaXI ACNNNNNCTCC 2 cut(s) 1633, 1663
Bsc4I CCNNNNNNNGG 2 cut(s) 461, 1048
Bse1I ACTGG 4 cut(s) 133, 1104, 1195, 2411
Bse3DI GCAATG 2 cut(s) 51, 1418
Bse8I GATNNNNATC 2 cut(s) 672, 1287
BseAI TCCGGA 1 cut(s) 2123
BseBI CCWGG 3 cut(s) 47, 2223, 2390
BseDI CCNNGG 3 cut(s) 588, 1486, 2221
BseGI GGATG 3 cut(s) 160, 828, 1719
BseJI GATNNNNATC 2 cut(s) 672, 1287
BseLI CCNNNNNNNGG 2 cut(s) 461, 1048
BseMI GCAATG 2 cut(s) 51, 1418
BseMII CTCAG 5 cut(s) 361, 765, 1186, 1608, 1668
BseNI ACTGG 4 cut(s) 133, 1104, 1195, 2411
BseRI GAGGAG 1 cut(s) 2464
BseSI GKGCMC 1 cut(s) 1343
BseXI GCAGC 3 cut(s) 185, 792, 939
BseYI CCCAGC 1 cut(s) 1342
BsgI GTGCAG 1 cut(s) 1578
BshFI GGCC 5 cut(s) 50, 147, 604, 1341, 2274
BsiHKAI GWGCWC 1 cut(s) 1006
BsiSI CCGG 1 cut(s) 2124
BslFI GGGAC 1 cut(s) 810
BslI CCNNNNNNNGG 2 cut(s) 461, 1048
BsmAI GTCTC 2 cut(s) 1128, 1792
BsmFI GGGAC 1 cut(s) 810
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 5 cut(s) 50, 147, 604, 1341, 2274
Bso31I GGTCTC 1 cut(s) 1128
Bsp120I GGGCCC 1 cut(s) 1339
Bsp1286I GDGCHC 2 cut(s) 1006, 1343
Bsp13I TCCGGA 1 cut(s) 2123
Bsp1407I TGTACA 1 cut(s) 564
Bsp19I CCATGG 1 cut(s) 1486
BspACI CCGC 3 cut(s) 1622, 2196, 2340
BspANI GGCC 5 cut(s) 50, 147, 604, 1341, 2274
BspCNI CTCAG 5 cut(s) 360, 764, 1185, 1609, 1669
BspEI TCCGGA 1 cut(s) 2123
BspLI GGNNCC 4 cut(s) 826, 1341, 1478, 1650
BspMAI CTGCAG 1 cut(s) 2448
BspPI GGATC 2 cut(s) 351, 1446
BspQI GCTCTTC 1 cut(s) 132
BspTI CTTAAG 1 cut(s) 2354
BspTNI GGTCTC 1 cut(s) 1128
BsrDI GCAATG 2 cut(s) 51, 1418
BsrGI TGTACA 1 cut(s) 564
BsrI ACTGG 4 cut(s) 133, 1104, 1195, 2411
BssECI CCNNGG 3 cut(s) 588, 1486, 2221
BssSI CACGAG 2 cut(s) 1826, 1930
BssT1I CCWWGG 2 cut(s) 588, 1486
Bst2BI CACGAG 2 cut(s) 1826, 1930
Bst2UI CCWGG 3 cut(s) 47, 2223, 2390
Bst4CI ACNGT 1 cut(s) 2305
Bst6I CTCTTC 2 cut(s) 132, 736
BstAFI CTTAAG 1 cut(s) 2354
BstAUI TGTACA 1 cut(s) 564
BstC8I GCNNGC 5 cut(s) 123, 220, 620, 851, 1647
BstDSI CCRYGG 1 cut(s) 1486
BstEII GGTNACC 1 cut(s) 2003
BstF5I GGATG 3 cut(s) 160, 828, 1719
BstMAI GTCTC 2 cut(s) 1128, 1792
BstMWI GCNNNNNNNGC 5 cut(s) 1338, 1646, 1785, 2280, 2452
BstNI CCWGG 3 cut(s) 47, 2223, 2390
BstNSI RCATGY 6 cut(s) 125, 222, 571, 853, 1315, 1612
BstPAI GACNNNNGTC 1 cut(s) 1193
BstPI GGTNACC 1 cut(s) 2003
BstSCI CCNGG 3 cut(s) 45, 2221, 2388
BstSFI CTRYAG 2 cut(s) 1793, 2444
BstSLI GKGCMC 1 cut(s) 1343
BstV1I GCAGC 3 cut(s) 185, 792, 939
BstV2I GAAGAC 3 cut(s) 832, 1530, 1620
BstX2I RGATCY 5 cut(s) 253, 343, 871, 1438, 1465
BstXI CCANNNNNNTGG 2 cut(s) 1487, 2051
BstYI RGATCY 5 cut(s) 253, 343, 871, 1438, 1465
BsuI GTATCC 1 cut(s) 894
BsuRI GGCC 5 cut(s) 50, 147, 604, 1341, 2274
BtgI CCRYGG 1 cut(s) 1486
BtsCI GGATG 3 cut(s) 160, 828, 1719
BtsI GCAGTG 1 cut(s) 1566
BtsIMutI CAGTG 4 cut(s) 282, 445, 1566, 2310
Cac8I GCNNGC 5 cut(s) 123, 220, 620, 851, 1647
Cfr13I GGNCC 5 cut(s) 443, 824, 1339, 1340, 2198
Csp6I GTAC 2 cut(s) 565, 2301
CviQI GTAC 2 cut(s) 565, 2301
DraI TTTAAA 2 cut(s) 810, 1818
EaeI YGGCCR 2 cut(s) 48, 602
Eam1104I CTCTTC 2 cut(s) 132, 736
EarI CTCTTC 2 cut(s) 132, 736
Eco130I CCWWGG 2 cut(s) 588, 1486
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 1 cut(s) 1343
Eco31I GGTCTC 1 cut(s) 1128
Eco32I GATATC 2 cut(s) 329, 2049
Eco47I GGWCC 3 cut(s) 443, 824, 2198
Eco57I CTGAAG 4 cut(s) 626, 2030, 2135, 2259
Eco91I GGTNACC 1 cut(s) 2003
EcoO109I RGGNCCY 1 cut(s) 824
EcoO65I GGTNACC 1 cut(s) 2003
EcoRI GAATTC 1 cut(s) 2130
EcoRII CCWGG 3 cut(s) 45, 2221, 2388
EcoRV GATATC 2 cut(s) 329, 2049
EcoT14I CCWWGG 2 cut(s) 588, 1486
EcoT22I ATGCAT 1 cut(s) 21
EcoT38I GRGCYC 1 cut(s) 1343
ErhI CCWWGG 2 cut(s) 588, 1486
FalI AAGNNNNNCTT 4 cut(s) 1152, 1184, 1885, 1917
FaqI GGGAC 1 cut(s) 810
FbaI TGATCA 2 cut(s) 372, 2245
FblI GTMKAC 1 cut(s) 2430
Fnu4HI GCNGC 4 cut(s) 199, 781, 928, 1622
FokI GGATG 3 cut(s) 167, 815, 1726
FriOI GRGCYC 1 cut(s) 1343
Fsp4HI GCNGC 4 cut(s) 199, 781, 928, 1622
FspBI CTAG 6 cut(s) 251, 860, 869, 1152, 1308, 1473
GluI GCNGC 4 cut(s) 199, 781, 928, 1622
GsaI CCCAGC 1 cut(s) 1346
GsuI CTGGAG 3 cut(s) 116, 1713, 2244
HaeIII GGCC 5 cut(s) 50, 147, 604, 1341, 2274
HapII CCGG 1 cut(s) 2124
HincII GTYRAC 2 cut(s) 942, 1509
HindII GTYRAC 2 cut(s) 942, 1509
HindIII AAGCTT 3 cut(s) 1516, 1985, 2281
HpaII CCGG 1 cut(s) 2124
HphI GGTGA 3 cut(s) 308, 650, 2202
Hpy166II GTNNAC 5 cut(s) 443, 942, 1232, 1509, 2431
Hpy8I GTNNAC 5 cut(s) 443, 942, 1232, 1509, 2431
HpyAV CCTTC 5 cut(s) 318, 671, 815, 887, 1642
HpyCH4III ACNGT 1 cut(s) 2305
HpyCH4IV ACGT 1 cut(s) 1096
HpyF10VI GCNNNNNNNGC 5 cut(s) 1338, 1646, 1785, 2280, 2452
HpySE526I ACGT 1 cut(s) 1096
Kpn2I TCCGGA 1 cut(s) 2123
Ksp22I TGATCA 2 cut(s) 372, 2245
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 2 cut(s) 92, 1654
Lsp1109I GCAGC 3 cut(s) 185, 792, 939
LweI GCATC 2 cut(s) 1704, 1935
MaeI CTAG 6 cut(s) 251, 860, 869, 1152, 1308, 1473
MaeII ACGT 1 cut(s) 1096
MaeIII GTNAC 5 cut(s) 656, 862, 876, 1092, 2003
MfeI CAATTG 3 cut(s) 404, 959, 2117
MflI RGATCY 5 cut(s) 253, 343, 871, 1438, 1465
MhlI GDGCHC 2 cut(s) 1006, 1343
MlsI TGGCCA 2 cut(s) 50, 604
MluNI TGGCCA 2 cut(s) 50, 604
MlyI GAGTC 6 cut(s) 167, 409, 414, 944, 2103, 2184
MmeI TCCRAC 3 cut(s) 61, 114, 1691
Mox20I TGGCCA 2 cut(s) 50, 604
Mph1103I ATGCAT 1 cut(s) 21
MroI TCCGGA 1 cut(s) 2123
MscI TGGCCA 2 cut(s) 50, 604
MseI TTAA 8 cut(s) 614, 696, 744, 809, 987, 1085, 1817, 2355
MslI CAYNNNNRTG 3 cut(s) 848, 1934, 2265
Msp20I TGGCCA 2 cut(s) 50, 604
MspA1I CMGCKG 1 cut(s) 1624
MspCI CTTAAG 1 cut(s) 2354
MspI CCGG 1 cut(s) 2124
MspR9I CCNGG 3 cut(s) 47, 2223, 2390
MunI CAATTG 3 cut(s) 404, 959, 2117
Mva1269I GAATGC 1 cut(s) 19
MvaI CCWGG 3 cut(s) 47, 2223, 2390
MwoI GCNNNNNNNGC 5 cut(s) 1338, 1646, 1785, 2280, 2452
NcoI CCATGG 1 cut(s) 1486
NlaIV GGNNCC 4 cut(s) 826, 1341, 1478, 1650
NmuCI GTSAC 2 cut(s) 656, 876
NsiI ATGCAT 1 cut(s) 21
NspI RCATGY 6 cut(s) 125, 222, 571, 853, 1315, 1612
PaeI GCATGC 3 cut(s) 125, 222, 853
PceI AGGCCT 1 cut(s) 147
PciI ACATGT 2 cut(s) 567, 1608
PciSI GCTCTTC 1 cut(s) 132
PctI GAATGC 1 cut(s) 19
PfoI TCCNGGA 1 cut(s) 2388
PkrI GCNGC 4 cut(s) 200, 782, 929, 1623
PleI GAGTC 6 cut(s) 166, 408, 414, 943, 2102, 2184
PpsI GAGTC 6 cut(s) 166, 408, 414, 943, 2102, 2184
PpuMI RGGWCCY 1 cut(s) 824
PscI ACATGT 2 cut(s) 567, 1608
PshAI GACNNNNGTC 1 cut(s) 1193
PshBI ATTAAT 1 cut(s) 696
PsiI TTATAA 2 cut(s) 354, 1038
Psp5II RGGWCCY 1 cut(s) 824
Psp6I CCWGG 3 cut(s) 45, 2221, 2388
PspEI GGTNACC 1 cut(s) 2003
PspFI CCCAGC 1 cut(s) 1342
PspGI CCWGG 3 cut(s) 45, 2221, 2388
PspN4I GGNNCC 4 cut(s) 826, 1341, 1478, 1650
PspOMI GGGCCC 1 cut(s) 1339
PspPI GGNCC 5 cut(s) 443, 824, 1339, 1340, 2198
PspPPI RGGWCCY 1 cut(s) 824
PstI CTGCAG 1 cut(s) 2448
PsuI RGATCY 5 cut(s) 253, 343, 871, 1438, 1465
RsaI GTAC 2 cut(s) 566, 2302
RsaNI GTAC 2 cut(s) 565, 2301
RseI CAYNNNNRTG 3 cut(s) 848, 1934, 2265
SapI GCTCTTC 1 cut(s) 132
SaqAI TTAA 8 cut(s) 614, 696, 744, 809, 987, 1085, 1817, 2355
SatI GCNGC 4 cut(s) 199, 781, 928, 1622
Sau96I GGNCC 5 cut(s) 443, 824, 1339, 1340, 2198
SchI GAGTC 6 cut(s) 167, 409, 414, 944, 2103, 2184
ScrFI CCNGG 3 cut(s) 47, 2223, 2390
SduI GDGCHC 2 cut(s) 1006, 1343
SfaNI GCATC 2 cut(s) 1704, 1935
SfcI CTRYAG 2 cut(s) 1793, 2444
SinI GGWCC 3 cut(s) 443, 824, 2198
SmiMI CAYNNNNRTG 3 cut(s) 848, 1934, 2265
SmlI CTYRAG 4 cut(s) 527, 553, 1963, 2354
SmoI CTYRAG 4 cut(s) 527, 553, 1963, 2354
SphI GCATGC 3 cut(s) 125, 222, 853
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 3 cut(s) 1622, 2196, 2340
SspMI CTAG 6 cut(s) 251, 860, 869, 1152, 1308, 1473
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 3 cut(s) 45, 2221, 2388
StyI CCWWGG 2 cut(s) 588, 1486
TaaI ACNGT 1 cut(s) 2305
TaiI ACGT 1 cut(s) 1099
TaqI TCGA 2 cut(s) 276, 2075
TatI WGTACW 2 cut(s) 564, 2300
TauI GCSGC 1 cut(s) 1624
Tru1I TTAA 8 cut(s) 614, 696, 744, 809, 987, 1085, 1817, 2355
Tru9I TTAA 8 cut(s) 614, 696, 744, 809, 987, 1085, 1817, 2355
TscAI CASTG 4 cut(s) 289, 445, 1566, 2310
TseFI GTSAC 2 cut(s) 656, 876
TseI GCWGC 3 cut(s) 198, 780, 927
Tsp45I GTSAC 2 cut(s) 656, 876
TspDTI ATGAA 6 cut(s) 376, 611, 1379, 1836, 2244, 2305
TspGWI ACGGA 1 cut(s) 895
TspRI CASTG 4 cut(s) 289, 445, 1566, 2310
Vha464I CTTAAG 1 cut(s) 2354
VpaK11BI GGWCC 3 cut(s) 443, 824, 2198
VspI ATTAAT 1 cut(s) 696
XapI RAATTY 7 cut(s) 580, 1081, 1914, 2058, 2083, 2130, 2384
XbaI TCTAGA 1 cut(s) 250
XceI RCATGY 6 cut(s) 125, 222, 571, 853, 1315, 1612
XmiI GTMKAC 1 cut(s) 2430
XspI CTAG 6 cut(s) 251, 860, 869, 1152, 1308, 1473
Zsp2I ATGCAT 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.