Rmu_sc0014454.1_g000009

Leucine Rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014454.1
OG0000028
Physical Location & Seq
Reverse (-)
20381 .. 23221
2841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014454.1_g000009.1.cds

Sequence Viewer

Length: 2841 bp
atgagtgttaggtctatacaatattctgttttggcttggcatctatgcctggccattatctctgctacttgttgttcaagtagtgcaggaagctccaacattatgtgccaggaaagtgaaaggcgtgctcttcttcagcttaagcaaggccttatggacgagtctaatgttcttgcctcttggggaagcaagaaagattgttgcgagtggagaggaatagcatgcaacaaccaaacaggtcatgtcatcactctaaatctctcttataattcttctgatgattacattgatgctgaagcttctttaagaggtgaaattgatccttcactacttgaattgcgatatctaaattacttggacctcagttttaatgattttggaggaattatgattcccaagttcattggttctttgactcgattgaaagaactcaaacttgtggaagctaattttagtggaactgttcctccccaacttggaaacctctctaatttgcacactcttgaccttgaaggcaatgatgtgagctttgaaagtctcgagtggttatctcatctttcttccttgagatacctcaacatttctgatatagatttgtctgggaatagaaattggccacaatctttcagcaagctcacttcagtgatagagcttcagttatcttattgtgatctcggtgtcaatctaagatcactttcctctatcaattcttcagcctctttccaagtccttgacctctcttctaattctcttaattcttcaatattttattggatatccaatgttagcagcagcaaccttgtccatattggattgagttataatgatttacaaggtcccatcccagatgttttcacaaacatggcttctctaaaatttcttgacctgtctcgaaaccaacttgaaggtggaataccaaaattctttcaaagcttatgcagcttagagtccttgtatttagagagaaaccaattctctcaaaacattaaggactctgtaaagatcttgtcctgtgctggtagtacactcaagaacttggacttgagccgaaaccggttttgggggtcactatggctagatttaaaaagttttacaaagataaaatttttatctctttcccaaaatctgctaaatggttctctaccagagagtatggggcaaatttctagccttgaagctttggacctttcttggaattcgttgaatggtgtcataacagaaggccactttttgaacctctctcgtttacagtccttggatgtttctcataatccaactttgtctatcaatctgagctcatattggaatccaccatttcaacttgagtatttgaacatgtcctcttgcaaagtgggcccagctttccccagatggattcaaacgcagagaaatcttactaagcttcgtatcaacaatgcaggaatattggactcattgcctgagaaattcttggatcaattttctggcttagaggacctagatctttccctgaacaaaatccatggcaaattaccgaatttttccacaagcttattgatgtatgttaacttgtcttctaatcagttttctggtgcattgccatcattccctccaacaatcaaatatttgatcctctcggaaaacatgctttctggacccctgagttccttgtgtgcaagagaggctccaaatttccggtgtctcgacctttctgtaaacctgatatcaggggaacttcctaattgctggatgcaatttccaaaattaatcgtactgaatttaggaaagaataaattttctgggaaactaccaagctcgttaggcaatttacaaaaattgcgtatattgcgtttacatggtaacaacttttctggagaactgccttctttcgagaactgtacagaactagtagctgttgaccttggagcaaataaattatccggaaaaatcccaacatggataggccaaaaccaaacatggttgtcggttctacgcctacggtctaatgagtttaacggaatcataccctcatccctgtgcagtttaagctccattcatcttttggacctctctcagaacaatttatcaggagccttgccgcattgcatcagtaacataacagcttcatctgatgagtcaagaaattatggatatgaagataatggatttatacaaatagcgtgggaaggagaagagtggaaagaagtagagatggtgtggaaaggagtagagattgagtttgggaaaaatcttgtacatttgagaagcattgacatttcaagcaatcacttggttggggatattcctgaaaatataacaagcatgctaaagttgaattctctaaacctctcaagaaacaatttgacagggaaggttcctgaaaagtttggtaacctgaccatgttagaatctcttgatttgtcaagaaaccagatatctggtagaattccttcaagtttttcgagcttaaactttcttagtgtcttggacttatcatacaaccacttgtctggaagaattccaccaagcactcaacttcagagttttaatgcttctgcctatataggaaatagtggactttgcggaccaccacttacacaacaatgccctggagatggaacaacacaaaatcctggagtcactactggtactgaaaatgataatgatggtctcataagcctgggattctttatcagtgcagtgctcggattcgtcactggattttggataatctgtggcagtttactgcttaagagctcttggagacacgcctatttcaggttcctggatgatacaagagatttggtttatgtcaaaactgctgtgtacaaggcaaaaatgcagaggagacttcacagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

946

Amino Acids

105.0

Weight (kDa)

6.02

Isoelectric Point (pI)

38.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 267, 822
AccIII TCCGGA 1 cut(s) 1919
AciI CCGC 2 cut(s) 2078, 2562
AclWI GGATC 3 cut(s) 314, 1461, 1603
AcoI YGGCCR 2 cut(s) 51, 614
AcuI CTGAAG 6 cut(s) 119, 315, 624, 638, 696, 2501
AfaI GTAC 6 cut(s) 1024, 1752, 1879, 2235, 2629, 2807
AfiI CCNNNNNNNGG 4 cut(s) 476, 1060, 2594, 2757
AflII CTTAAG 2 cut(s) 140, 2729
AflIII ACRYGT 1 cut(s) 1335
AgeI ACCGGT 1 cut(s) 1053
AhlI ACTAGT 1 cut(s) 1885
AjnI CCWGG 6 cut(s) 48, 108, 2587, 2611, 2658, 2763
AjuI GAANNNNNNNTTGG 2 cut(s) 1042, 1074
AleI CACNNNNGTG 1 cut(s) 641
AloI GAACNNNNNNTCC 2 cut(s) 451, 483
Alw21I GWGCWC 4 cut(s) 130, 1298, 2685, 2738
Alw26I GTCTC 6 cut(s) 542, 894, 1685, 2654, 2737, 2821
AlwI GGATC 3 cut(s) 314, 1461, 1603
Ama87I CYCGRG 1 cut(s) 539
Aor13HI TCCGGA 1 cut(s) 1919
AoxI GGCC 6 cut(s) 51, 148, 614, 1222, 1354, 1942
ApaI GGGCCC 1 cut(s) 1358
ApeKI GCWGC 3 cut(s) 789, 792, 939
AseI ATTAAT 1 cut(s) 1745
AsiGI ACCGGT 1 cut(s) 1053
Asp700I GAANNNNTTC 1 cut(s) 2428
AspS9I GGNCC 9 cut(s) 358, 836, 1183, 1354, 1355, 1474, 1634, 2044, 2564
AsuHPI GGTGA 1 cut(s) 323
AvaI CYCGRG 1 cut(s) 539
AvaII GGWCC 7 cut(s) 358, 836, 1183, 1474, 1634, 2044, 2564
BaeGI GKGCMC 1 cut(s) 1358
BalI TGGCCA 2 cut(s) 53, 616
BanII GRGCYC 3 cut(s) 1298, 1358, 2738
BarI GAAGNNNNNNTAC 4 cut(s) 897, 929, 2413, 2445
BbsI GAAGAC 1 cut(s) 1545
Bbv12I GWGCWC 4 cut(s) 130, 1298, 2685, 2738
BbvI GCAGC 3 cut(s) 801, 804, 951
BccI CCATC 6 cut(s) 848, 1365, 1588, 2185, 2588, 2639
BciT130I CCWGG 6 cut(s) 50, 110, 2589, 2613, 2660, 2765
BcoDI GTCTC 6 cut(s) 542, 894, 1685, 2654, 2737, 2821
BcuI ACTAGT 1 cut(s) 1885
BfaI CTAG 4 cut(s) 1076, 1167, 1478, 1886
BfrI CTTAAG 2 cut(s) 140, 2729
BglII AGATCT 2 cut(s) 1002, 1480
BisI GCNGC 4 cut(s) 790, 793, 940, 2078
BlsI GCNGC 4 cut(s) 791, 794, 941, 2079
Bme1390I CCNGG 6 cut(s) 50, 110, 2589, 2613, 2660, 2765
Bme18I GGWCC 7 cut(s) 358, 836, 1183, 1474, 1634, 2044, 2564
BmeT110I CYCGRG 1 cut(s) 539
BmgT120I GGNCC 9 cut(s) 358, 836, 1183, 1354, 1355, 1474, 1634, 2044, 2564
BmiI GGNNCC 7 cut(s) 838, 1356, 1636, 1665, 2071, 2355, 2762
BmrFI CCNGG 6 cut(s) 50, 110, 2589, 2613, 2660, 2765
BmsI GCATC 4 cut(s) 49, 280, 1719, 2094
BpiI GAAGAC 1 cut(s) 1545
BpmI CTGGAG 3 cut(s) 1872, 2610, 2634
BpuEI CTTGAG 5 cut(s) 586, 1013, 1063, 1343, 2314
BsaI GGTCTC 1 cut(s) 2654
BsaJI CCNNGG 5 cut(s) 1254, 1501, 1900, 2587, 2659
BsaWI WCCGGW 3 cut(s) 1053, 1674, 1919
BsaXI ACNNNNNCTCC 2 cut(s) 451, 481
Bsc4I CCNNNNNNNGG 4 cut(s) 476, 1060, 2594, 2757
Bse118I RCCGGY 1 cut(s) 1053
Bse1I ACTGG 2 cut(s) 2629, 2701
Bse3DI GCAATG 4 cut(s) 523, 1433, 1574, 2080
BseAI TCCGGA 1 cut(s) 1919
BseBI CCWGG 6 cut(s) 50, 110, 2589, 2613, 2660, 2765
BseDI CCNNGG 5 cut(s) 1254, 1501, 1900, 2587, 2659
BseGI GGATG 5 cut(s) 840, 1264, 1734, 2009, 2773
BseLI CCNNNNNNNGG 4 cut(s) 476, 1060, 2594, 2757
BseMI GCAATG 4 cut(s) 523, 1433, 1574, 2080
BseMII CTCAG 5 cut(s) 376, 1283, 1431, 1631, 2066
BseNI ACTGG 2 cut(s) 2629, 2701
BseRI GAGGAG 1 cut(s) 2839
BseSI GKGCMC 1 cut(s) 1358
BseXI GCAGC 3 cut(s) 801, 804, 951
BseYI CCCAGC 1 cut(s) 1357
BsgI GTGCAG 3 cut(s) 105, 2038, 2697
BshFI GGCC 6 cut(s) 53, 150, 616, 1224, 1356, 1944
BshTI ACCGGT 1 cut(s) 1053
BsiHKAI GWGCWC 4 cut(s) 130, 1298, 2685, 2738
BsiHKCI CYCGRG 1 cut(s) 539
BsiSI CCGG 3 cut(s) 1054, 1675, 1920
BslFI GGGAC 1 cut(s) 822
BslI CCNNNNNNNGG 4 cut(s) 476, 1060, 2594, 2757
BsmAI GTCTC 6 cut(s) 542, 894, 1685, 2654, 2737, 2821
BsmFI GGGAC 1 cut(s) 822
BsnI GGCC 6 cut(s) 53, 150, 616, 1224, 1356, 1944
Bso31I GGTCTC 1 cut(s) 2654
BsoBI CYCGRG 1 cut(s) 539
Bsp120I GGGCCC 1 cut(s) 1354
Bsp1286I GDGCHC 5 cut(s) 130, 1298, 1358, 2685, 2738
Bsp13I TCCGGA 1 cut(s) 1919
Bsp1407I TGTACA 3 cut(s) 1877, 2233, 2805
Bsp143I GATC 7 cut(s) 319, 670, 689, 1002, 1453, 1480, 1608
Bsp19I CCATGG 1 cut(s) 1501
BspACI CCGC 2 cut(s) 2078, 2562
BspANI GGCC 6 cut(s) 53, 150, 616, 1224, 1356, 1944
BspCNI CTCAG 5 cut(s) 375, 1284, 1432, 1632, 2065
BspEI TCCGGA 1 cut(s) 1919
BspLI GGNNCC 7 cut(s) 838, 1356, 1636, 1665, 2071, 2355, 2762
BspPI GGATC 3 cut(s) 314, 1461, 1603
BspQI GCTCTTC 1 cut(s) 135
BspTI CTTAAG 2 cut(s) 140, 2729
BspTNI GGTCTC 1 cut(s) 2654
BsrDI GCAATG 4 cut(s) 523, 1433, 1574, 2080
BsrFI RCCGGY 1 cut(s) 1053
BsrGI TGTACA 3 cut(s) 1877, 2233, 2805
BsrI ACTGG 2 cut(s) 2629, 2701
BssAI RCCGGY 1 cut(s) 1053
BssECI CCNNGG 5 cut(s) 1254, 1501, 1900, 2587, 2659
BssMI GATC 7 cut(s) 319, 670, 689, 1002, 1453, 1480, 1608
BssT1I CCWWGG 3 cut(s) 1254, 1501, 1900
Bst2UI CCWGG 6 cut(s) 50, 110, 2589, 2613, 2660, 2765
Bst4CI ACNGT 4 cut(s) 463, 1251, 1877, 1980
Bst6I CTCTTC 3 cut(s) 135, 745, 2166
BstAFI CTTAAG 2 cut(s) 140, 2729
BstAUI TGTACA 3 cut(s) 1877, 2233, 2805
BstC8I GCNNGC 4 cut(s) 126, 223, 632, 2303
BstDSI CCRYGG 1 cut(s) 1501
BstEII GGTNACC 1 cut(s) 2369
BstENI CCTNNNNNAGG 1 cut(s) 2755
BstF5I GGATG 5 cut(s) 840, 1264, 1734, 2009, 2773
BstKTI GATC 7 cut(s) 322, 673, 692, 1005, 1456, 1483, 1611
BstMAI GTCTC 6 cut(s) 542, 894, 1685, 2654, 2737, 2821
BstMBI GATC 7 cut(s) 319, 670, 689, 1002, 1453, 1480, 1608
BstMWI GCNNNNNNNGC 6 cut(s) 939, 1353, 1661, 1800, 1825, 2025
BstNI CCWGG 6 cut(s) 50, 110, 2589, 2613, 2660, 2765
BstNSI RCATGY 4 cut(s) 225, 1339, 1627, 2305
BstPI GGTNACC 1 cut(s) 2369
BstSCI CCNGG 6 cut(s) 48, 108, 2587, 2611, 2658, 2763
BstSLI GKGCMC 1 cut(s) 1358
BstV1I GCAGC 3 cut(s) 801, 804, 951
BstV2I GAAGAC 1 cut(s) 1545
BstX2I RGATCY 2 cut(s) 1002, 1480
BstXI CCANNNNNNTGG 2 cut(s) 2417, 2489
BstYI RGATCY 2 cut(s) 1002, 1480
BsuRI GGCC 6 cut(s) 53, 150, 616, 1224, 1356, 1944
BtgI CCRYGG 1 cut(s) 1501
BtsCI GGATG 5 cut(s) 840, 1264, 1734, 2009, 2773
BtsI GCAGTG 1 cut(s) 2685
BtsIMutI CAGTG 4 cut(s) 648, 2680, 2685, 2694
Cac8I GCNNGC 4 cut(s) 126, 223, 632, 2303
Cfr10I RCCGGY 1 cut(s) 1053
Cfr13I GGNCC 9 cut(s) 358, 836, 1183, 1354, 1355, 1474, 1634, 2044, 2564
Csp6I GTAC 6 cut(s) 1023, 1751, 1878, 2234, 2628, 2806
CspAI ACCGGT 1 cut(s) 1053
CspCI CAANNNNNGTGG 2 cut(s) 2141, 2176
CviQI GTAC 6 cut(s) 1023, 1751, 1878, 2234, 2628, 2806
DpnI GATC 7 cut(s) 321, 672, 691, 1004, 1455, 1482, 1610
DpnII GATC 7 cut(s) 319, 670, 689, 1002, 1453, 1480, 1608
DraI TTTAAA 1 cut(s) 1083
EaeI YGGCCR 2 cut(s) 51, 614
Eam1104I CTCTTC 3 cut(s) 135, 745, 2166
EarI CTCTTC 3 cut(s) 135, 745, 2166
Ecl136II GAGCTC 2 cut(s) 1296, 2736
Eco130I CCWWGG 3 cut(s) 1254, 1501, 1900
Eco147I AGGCCT 1 cut(s) 150
Eco24I GRGCYC 3 cut(s) 1298, 1358, 2738
Eco31I GGTCTC 1 cut(s) 2654
Eco32I GATATC 4 cut(s) 344, 777, 1704, 2415
Eco47I GGWCC 7 cut(s) 358, 836, 1183, 1474, 1634, 2044, 2564
Eco53kI GAGCTC 2 cut(s) 1296, 2736
Eco57I CTGAAG 6 cut(s) 119, 315, 624, 638, 696, 2501
Eco88I CYCGRG 1 cut(s) 539
Eco91I GGTNACC 1 cut(s) 2369
EcoICRI GAGCTC 2 cut(s) 1296, 2736
EcoNI CCTNNNNNAGG 1 cut(s) 2755
EcoO109I RGGNCCY 2 cut(s) 836, 1474
EcoO65I GGTNACC 1 cut(s) 2369
EcoRI GAATTC 4 cut(s) 1195, 2314, 2424, 2496
EcoRII CCWGG 6 cut(s) 48, 108, 2587, 2611, 2658, 2763
EcoRV GATATC 4 cut(s) 344, 777, 1704, 2415
EcoT14I CCWWGG 3 cut(s) 1254, 1501, 1900
EcoT38I GRGCYC 3 cut(s) 1298, 1358, 2738
ErhI CCWWGG 3 cut(s) 1254, 1501, 1900
FaqI GGGAC 1 cut(s) 822
Fnu4HI GCNGC 4 cut(s) 790, 793, 940, 2078
FokI GGATG 5 cut(s) 827, 1271, 1741, 1996, 2780
FriOI GRGCYC 3 cut(s) 1298, 1358, 2738
Fsp4HI GCNGC 4 cut(s) 790, 793, 940, 2078
FspBI CTAG 4 cut(s) 1076, 1167, 1478, 1886
GluI GCNGC 4 cut(s) 790, 793, 940, 2078
GsaI CCCAGC 1 cut(s) 1361
GsuI CTGGAG 3 cut(s) 1872, 2610, 2634
HaeIII GGCC 6 cut(s) 53, 150, 616, 1224, 1356, 1944
HapII CCGG 3 cut(s) 1054, 1675, 1920
HincII GTYRAC 2 cut(s) 1546, 1897
HindII GTYRAC 2 cut(s) 1546, 1897
HindIII AAGCTT 5 cut(s) 297, 931, 1176, 1400, 1528
HpaI GTTAAC 1 cut(s) 1546
HpaII CCGG 3 cut(s) 1054, 1675, 1920
HphI GGTGA 1 cut(s) 323
Hpy166II GTNNAC 9 cut(s) 1025, 1247, 1546, 1696, 1832, 1897, 2555, 2723, 2806
Hpy188I TCNGA 8 cut(s) 277, 586, 1293, 1618, 2055, 2110, 2520, 2687
Hpy8I GTNNAC 9 cut(s) 1025, 1247, 1546, 1696, 1832, 1897, 2555, 2723, 2806
HpyAV CCTTC 8 cut(s) 333, 506, 899, 1214, 1872, 2159, 2344, 2439
HpyCH4III ACNGT 4 cut(s) 463, 1251, 1877, 1980
HpyF10VI GCNNNNNNNGC 6 cut(s) 939, 1353, 1661, 1800, 1825, 2025
Kpn2I TCCGGA 1 cut(s) 1919
KspAI GTTAAC 1 cut(s) 1546
Kzo9I GATC 7 cut(s) 319, 670, 689, 1002, 1453, 1480, 1608
LguI GCTCTTC 1 cut(s) 135
LmnI GCTCC 5 cut(s) 98, 1669, 1904, 2033, 2069
Lsp1109I GCAGC 3 cut(s) 801, 804, 951
LweI GCATC 4 cut(s) 49, 280, 1719, 2094
MaeI CTAG 4 cut(s) 1076, 1167, 1478, 1886
MaeIII GTNAC 6 cut(s) 1065, 1838, 2090, 2369, 2617, 2692
MalI GATC 7 cut(s) 321, 672, 691, 1004, 1455, 1482, 1610
MboI GATC 7 cut(s) 319, 670, 689, 1002, 1453, 1480, 1608
MflI RGATCY 2 cut(s) 1002, 1480
MhlI GDGCHC 5 cut(s) 130, 1298, 1358, 2685, 2738
MlsI TGGCCA 2 cut(s) 53, 616
MluNI TGGCCA 2 cut(s) 53, 616
MlyI GAGTC 7 cut(s) 170, 409, 956, 986, 1424, 2123, 2625
MmeI TCCRAC 3 cut(s) 120, 1298, 1616
Mox20I TGGCCA 2 cut(s) 53, 616
MroI TCCGGA 1 cut(s) 1919
MroXI GAANNNNTTC 1 cut(s) 2428
MscI TGGCCA 2 cut(s) 53, 616
MslI CAYNNNNRTG 4 cut(s) 641, 860, 2014, 2581
Msp20I TGGCCA 2 cut(s) 53, 616
MspCI CTTAAG 2 cut(s) 140, 2729
MspI CCGG 3 cut(s) 1054, 1675, 1920
MspR9I CCNGG 6 cut(s) 50, 110, 2589, 2613, 2660, 2765
MvaI CCWGG 6 cut(s) 50, 110, 2589, 2613, 2660, 2765
MwoI GCNNNNNNNGC 6 cut(s) 939, 1353, 1661, 1800, 1825, 2025
NcoI CCATGG 1 cut(s) 1501
NdeII GATC 7 cut(s) 319, 670, 689, 1002, 1453, 1480, 1608
NlaIV GGNNCC 7 cut(s) 838, 1356, 1636, 1665, 2071, 2355, 2762
NmuCI GTSAC 3 cut(s) 1065, 2617, 2692
NspI RCATGY 4 cut(s) 225, 1339, 1627, 2305
OliI CACNNNNGTG 1 cut(s) 641
PaeI GCATGC 2 cut(s) 225, 2305
PaeR7I CTCGAG 1 cut(s) 539
PceI AGGCCT 1 cut(s) 150
PciI ACATGT 1 cut(s) 1335
PciSI GCTCTTC 1 cut(s) 135
PdmI GAANNNNTTC 1 cut(s) 2428
PfeI GAWTC 7 cut(s) 391, 1306, 1375, 1998, 2387, 2664, 2688
PfoI TCCNGGA 2 cut(s) 2611, 2763
PinAI ACCGGT 1 cut(s) 1053
PkrI GCNGC 4 cut(s) 791, 794, 941, 2079
PleI GAGTC 7 cut(s) 169, 409, 955, 986, 1424, 2122, 2624
PpsI GAGTC 7 cut(s) 169, 409, 955, 986, 1424, 2122, 2624
PpuMI RGGWCCY 2 cut(s) 836, 1474
PscI ACATGT 1 cut(s) 1335
PshBI ATTAAT 1 cut(s) 1745
PsiI TTATAA 2 cut(s) 267, 822
Psp124BI GAGCTC 2 cut(s) 1298, 2738
Psp5II RGGWCCY 2 cut(s) 836, 1474
Psp6I CCWGG 6 cut(s) 48, 108, 2587, 2611, 2658, 2763
PspEI GGTNACC 1 cut(s) 2369
PspFI CCCAGC 1 cut(s) 1357
PspGI CCWGG 6 cut(s) 48, 108, 2587, 2611, 2658, 2763
PspN4I GGNNCC 7 cut(s) 838, 1356, 1636, 1665, 2071, 2355, 2762
PspOMI GGGCCC 1 cut(s) 1354
PspPI GGNCC 9 cut(s) 358, 836, 1183, 1354, 1355, 1474, 1634, 2044, 2564
PspPPI RGGWCCY 2 cut(s) 836, 1474
PsuI RGATCY 2 cut(s) 1002, 1480
RsaI GTAC 6 cut(s) 1024, 1752, 1879, 2235, 2629, 2807
RsaNI GTAC 6 cut(s) 1023, 1751, 1878, 2234, 2628, 2806
RseI CAYNNNNRTG 4 cut(s) 641, 860, 2014, 2581
SacI GAGCTC 2 cut(s) 1298, 2738
SapI GCTCTTC 1 cut(s) 135
SatI GCNGC 4 cut(s) 790, 793, 940, 2078
Sau3AI GATC 7 cut(s) 319, 670, 689, 1002, 1453, 1480, 1608
Sau96I GGNCC 9 cut(s) 358, 836, 1183, 1354, 1355, 1474, 1634, 2044, 2564
SchI GAGTC 7 cut(s) 170, 409, 956, 986, 1424, 2123, 2625
ScrFI CCNGG 6 cut(s) 50, 110, 2589, 2613, 2660, 2765
SduI GDGCHC 5 cut(s) 130, 1298, 1358, 2685, 2738
SfaNI GCATC 4 cut(s) 49, 280, 1719, 2094
Sfr274I CTCGAG 1 cut(s) 539
SinI GGWCC 7 cut(s) 358, 836, 1183, 1474, 1634, 2044, 2564
SlaI CTCGAG 1 cut(s) 539
SmiMI CAYNNNNRTG 4 cut(s) 641, 860, 2014, 2581
SmlI CTYRAG 8 cut(s) 140, 539, 565, 1028, 1042, 1322, 2329, 2729
SmoI CTYRAG 8 cut(s) 140, 539, 565, 1028, 1042, 1322, 2329, 2729
SpeI ACTAGT 1 cut(s) 1885
SphI GCATGC 2 cut(s) 225, 2305
SseBI AGGCCT 1 cut(s) 150
SsiI CCGC 2 cut(s) 2078, 2562
SspI AATATT 4 cut(s) 23, 765, 1425, 1604
SspMI CTAG 4 cut(s) 1076, 1167, 1478, 1886
SstI GAGCTC 2 cut(s) 1298, 2738
StuI AGGCCT 1 cut(s) 150
StyD4I CCNGG 6 cut(s) 48, 108, 2587, 2611, 2658, 2763
StyI CCWWGG 3 cut(s) 1254, 1501, 1900
TaaI ACNGT 4 cut(s) 463, 1251, 1877, 1980
TaqI TCGA 6 cut(s) 418, 540, 892, 1683, 1869, 2441
TatI WGTACW 4 cut(s) 1022, 1877, 2233, 2805
TauI GCSGC 1 cut(s) 2080
TfiI GAWTC 7 cut(s) 391, 1306, 1375, 1998, 2387, 2664, 2688
TscAI CASTG 4 cut(s) 648, 2680, 2685, 2701
TseFI GTSAC 3 cut(s) 1065, 2617, 2692
TseI GCWGC 3 cut(s) 789, 792, 939
Tsp45I GTSAC 3 cut(s) 1065, 2617, 2692
TspDTI ATGAA 4 cut(s) 391, 2024, 2094, 2148
TspGWI ACGGA 1 cut(s) 2010
TspRI CASTG 4 cut(s) 648, 2680, 2685, 2701
Vha464I CTTAAG 2 cut(s) 140, 2729
VpaK11BI GGWCC 7 cut(s) 358, 836, 1183, 1474, 1634, 2044, 2564
VspI ATTAAT 1 cut(s) 1745
XagI CCTNNNNNAGG 1 cut(s) 2755
XceI RCATGY 4 cut(s) 225, 1339, 1627, 2305
XcmI CCANNNNNNNNNTGG 2 cut(s) 905, 2038
XhoI CTCGAG 1 cut(s) 539
XmnI GAANNNNTTC 1 cut(s) 2428
XspI CTAG 4 cut(s) 1076, 1167, 1478, 1886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.