RchiOBHm_Chr7g0207271

Leucine Rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000028
Physical Location & Seq
Reverse (-)
24667442 .. 24670147
2706 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18550

Sequence Viewer

Length: 2610 bp
ATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAATCTTGCATATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAATTTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAATCTTGCATATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAATTTCATTGGTTCTCTTAGTCAATTGAAAGAACTCAAACTTGCAGATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTCGATCTTTCCAGGAACAAATATATTAGTTCAGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGAGACTTGAGCATGTCTGGGCTGAATTTGTCTGAGACTCTGAATTGGCCACAATCTTTAAGCAAGCTCACTTTACTGACAGGGCTTCAGTTATACCAGTGTAACCTTCCTGATATAGCCAATGTCAACAGCAACTTTGTCCATATTGATCTCCGTGCCAACAATCTTGAAGGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTAGATCTGTCTTGGAATAAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTATCCTCAAACCAATTGTCTGAAAATATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGAGAACTTGGACTTGAGTGAAAACCAGTTTTGGGGGTCCTCGCCAGATTTGGCACGTTTTTCAAAGTTACGCGTGTTAGATCTTTCCTCTAATCAACTAAATGGGTCTGTACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGAAATATTATATCTCTCCGGGAATTCTTTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTACGGGCTTTGGATATTTCTGGTAATCGTTTCTCTATCAACGTGAGCTCTGATTGGAATCCACCATTTCAACTTGATTCGTTAGAGATGTCCTCTTGCAAGGTGGGCCCAGCTTTTCCCAAGTGGATTCTAACGCAAACAAATCTTTATAGGCTTTATCTTTCTAATGCTAGACTATCAGGATCATTACCTATCCAGGTTTGGGATCTATTTTCTGGCTTAGAACTATTACATCTCTCTATGAACCAAATCCATGGGAAACTACCGAATCTGTCATCGACAAGTTTAAGTTATGTTTACTTGTCTTCTAATCTATTTTCTGGCGCGTTGCCATCATTTCCTCCTATGCTCAGGTCTTTGTATCTCTCGAATAACAGTTTTTCAGGACCTTTGTCTTCCTTCTGTGCTCCAGATTTATGGTTTGTTGACATTTCTAAGAACCTATTGTCTGGGGAGCTTCCTAATTGTTGGATGCAATGTCAAGAATTGGAAGTGTTGGATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTGGTTAGGCAATCTACAGTCAATTTGGATATTGTGTTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTATCGGTTTAGTGATGGTTGACCTTGGCAACAATAACCTGTCGGAAAAGATACCAACATGGATTGGCCAAAGACTACCAAACTTGGTGATTCTACGCTTACGGTCAAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCAATCTAGCTGCCATTCATGTTTTGGACCTTTCTCACAACAATATTTCAAGAGGCTTGCCAGATTGCTTCAATAACATAACCGCTTTGGCTGATGATTCTGGAGTTGATGGTGAAATTGTGGAACTTGTGTGGAAAGGAATAGAAATTGAGTTTGGGGAAAATGTTGAGGGTATGAGAGGCATTGACATTTCAAGCAATTATTTGGTTGGAGAAATTCCGGAAAGTATAACGAGTATGACAAACTTGATTTCTCTGAATCTGTCTAGAAACATATTGACGGGAAAGCTTCCTGAAGACTTTGGTAATATGAAGATGTTGGAATCTCTTGATTTGTTAAGAAACTGGATATCTGGTAAAATTCCTACAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTAGACTTATCACACAACAACTTGTCAGGAAGAATTCCATCAGGCACCCAACTTCAGGGTTTTAATGCTTCTCAATATATGGGAAATCGTGGACTTTGTGGACCACCGCTGACACAAAGTTGTCCAGGAGAAGGAACAGTTCAAGATGATGGAATCGCGAGAGGAACTGAAATTGATAACAAAGAACAGGTTAGTGATGGTCTCATAAACCTTGGATTCTTTATTAGTGCAGTGTTGGGATTTGTCACTGGATTTTGGATGGTCTGCGGTAGTTTACTGCTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATTTATGTCAAAACTGTTGTGTACAAGGCAAAAGTGCGGAGGACACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

869

Amino Acids

95.77

Weight (kDa)

4.96

Isoelectric Point (pI)

35.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 5 - 187 1.1e-17 Leucine-rich repeat region
LRR_8 PF13855 208 - 264 1.6e-08 Leucine rich repeat
LRR_8 PF13855 281 - 339 1.5e-09 Leucine rich repeat
LRR_8 PF13855 323 - 364 5e-06 Leucine rich repeat
LRR_8 PF13855 563 - 622 3.2e-06 Leucine rich repeat
LRR_8 PF13855 667 - 721 1.7e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2261
AccII CGCG 3 cut(s) 918, 1385, 2375
AccIII TCCGGA 1 cut(s) 2038
AciI CCGC 4 cut(s) 1902, 2324, 2484, 2590
AclWI GGATC 2 cut(s) 1249, 1272
AcoI YGGCCR 2 cut(s) 527, 1744
AcsI RAATTY 6 cut(s) 14, 505, 1009, 2034, 2178, 2250
AcuI CTGAAG 3 cut(s) 551, 2133, 2255
AfaI GTAC 2 cut(s) 957, 2576
AfiI CCNNNNNNNGG 7 cut(s) 92, 239, 386, 877, 1261, 2272, 2348
AflII CTTAAG 1 cut(s) 2498
AflIII ACRYGT 1 cut(s) 916
AjnI CCWGG 4 cut(s) 422, 1254, 2341, 2532
AjuI GAANNNNNNNTTGG 2 cut(s) 1956, 1988
AluBI AGCT 9 cut(s) 547, 759, 1107, 1172, 1516, 1596, 1829, 2107, 2199
AluI AGCT 9 cut(s) 547, 759, 1107, 1172, 1516, 1596, 1829, 2107, 2199
Alw21I GWGCWC 2 cut(s) 1109, 1468
Alw26I GTCTC 3 cut(s) 477, 509, 2423
AlwI GGATC 2 cut(s) 1249, 1272
Ama87I CYCGRG 1 cut(s) 959
Aor13HI TCCGGA 1 cut(s) 2038
AoxI GGCC 3 cut(s) 527, 1165, 1744
ApaI GGGCCC 1 cut(s) 1169
ApeKI GCWGC 2 cut(s) 756, 1829
ApoI RAATTY 6 cut(s) 14, 505, 1009, 2034, 2178, 2250
ArsI GACNNNNNNTTYG 2 cut(s) 776, 808
AspLEI GCGC 1 cut(s) 1385
AsuC2I CCSGG 1 cut(s) 1006
AsuHPI GGTGA 2 cut(s) 1777, 1943
AvaI CYCGRG 1 cut(s) 959
AvaII GGWCC 8 cut(s) 74, 221, 368, 653, 882, 1445, 1846, 2318
BaeGI GKGCMC 1 cut(s) 1169
BalI TGGCCA 2 cut(s) 529, 1746
BanI GGYRCC 1 cut(s) 2261
BanII GRGCYC 2 cut(s) 1109, 1169
BarI GAAGNNNNNNTAC 2 cut(s) 714, 746
BbsI GAAGAC 4 cut(s) 661, 1356, 1446, 2121
Bbv12I GWGCWC 2 cut(s) 1109, 1468
BbvI GCAGC 2 cut(s) 768, 1816
BccI CCATC 8 cut(s) 665, 1399, 1687, 1922, 2263, 2360, 2408, 2470
BciT130I CCWGG 4 cut(s) 424, 1256, 2343, 2534
BciVI GTATCC 1 cut(s) 723
BcnI CCSGG 1 cut(s) 1006
BcoDI GTCTC 3 cut(s) 477, 509, 2423
BfaI CTAG 6 cut(s) 689, 698, 981, 1230, 1826, 2085
BfmI CTRYAG 1 cut(s) 1610
BfrI CTTAAG 1 cut(s) 2498
BfuI GTATCC 1 cut(s) 723
BglII AGATCT 2 cut(s) 700, 925
BisI GCNGC 2 cut(s) 757, 1830
BlsI GCNGC 2 cut(s) 758, 1831
Bme1390I CCNGG 5 cut(s) 424, 1006, 1256, 2343, 2534
Bme18I GGWCC 8 cut(s) 74, 221, 368, 653, 882, 1445, 1846, 2318
BmeT110I CYCGRG 1 cut(s) 959
BmiI GGNNCC 4 cut(s) 655, 883, 1167, 2263
BmrFI CCNGG 5 cut(s) 424, 1006, 1256, 2343, 2534
BmsI GCATC 2 cut(s) 343, 1521
BoxI GACNNNNGTC 1 cut(s) 1450
BpiI GAAGAC 4 cut(s) 661, 1356, 1446, 2121
BplI GAGNNNNNCTC 2 cut(s) 1136, 1168
BpmI CTGGAG 2 cut(s) 1452, 1941
Bpu10I CCTNAGC 1 cut(s) 1409
BpuEI CTTGAG 5 cut(s) 473, 499, 508, 866, 880
BpuMI CCSGG 1 cut(s) 1006
BsaBI GATNNNNATC 1 cut(s) 1116
BsaI GGTCTC 1 cut(s) 2423
BsaJI CCNNGG 3 cut(s) 1312, 1702, 2428
BsaWI WCCGGW 1 cut(s) 2038
Bsc4I CCNNNNNNNGG 7 cut(s) 92, 239, 386, 877, 1261, 2272, 2348
Bse1I ACTGG 4 cut(s) 577, 871, 2168, 2470
Bse3DI GCAATG 1 cut(s) 1541
Bse8I GATNNNNATC 1 cut(s) 1116
BseAI TCCGGA 1 cut(s) 2038
BseBI CCWGG 4 cut(s) 424, 1256, 2343, 2534
BseDI CCNNGG 3 cut(s) 1312, 1702, 2428
BseGI GGATG 3 cut(s) 657, 1536, 2481
BseJI GATNNNNATC 1 cut(s) 1116
BseLI CCNNNNNNNGG 7 cut(s) 92, 239, 386, 877, 1261, 2272, 2348
BseMI GCAATG 1 cut(s) 1541
BseMII CTCAG 5 cut(s) 20, 167, 504, 825, 1423
BseNI ACTGG 4 cut(s) 577, 871, 2168, 2470
BseSI GKGCMC 1 cut(s) 1169
BseXI GCAGC 2 cut(s) 768, 1816
BseYI CCCAGC 1 cut(s) 1168
BsgI GTGCAG 1 cut(s) 2466
Bsh1236I CGCG 3 cut(s) 918, 1385, 2375
BshFI GGCC 3 cut(s) 529, 1167, 1746
BshNI GGYRCC 1 cut(s) 2261
BsiHKAI GWGCWC 2 cut(s) 1109, 1468
BsiHKCI CYCGRG 1 cut(s) 959
BsiSI CCGG 2 cut(s) 1005, 2039
BslFI GGGAC 1 cut(s) 639
BslI CCNNNNNNNGG 7 cut(s) 92, 239, 386, 877, 1261, 2272, 2348
BsmAI GTCTC 3 cut(s) 477, 509, 2423
BsmFI GGGAC 1 cut(s) 639
BsnI GGCC 3 cut(s) 529, 1167, 1746
Bso31I GGTCTC 1 cut(s) 2423
BsoBI CYCGRG 1 cut(s) 959
Bsp120I GGGCCC 1 cut(s) 1165
Bsp1286I GDGCHC 3 cut(s) 1109, 1169, 1468
Bsp13I TCCGGA 1 cut(s) 2038
Bsp1407I TGTACA 1 cut(s) 2574
Bsp143I GATC 8 cut(s) 121, 268, 415, 628, 700, 925, 1241, 1264
Bsp19I CCATGG 1 cut(s) 1312
Bsp68I TCGCGA 1 cut(s) 2375
BspACI CCGC 4 cut(s) 1902, 2324, 2484, 2590
BspANI GGCC 3 cut(s) 529, 1167, 1746
BspCNI CTCAG 5 cut(s) 21, 168, 505, 826, 1422
BspEI TCCGGA 1 cut(s) 2038
BspFNI CGCG 3 cut(s) 918, 1385, 2375
BspLI GGNNCC 4 cut(s) 655, 883, 1167, 2263
BspPI GGATC 2 cut(s) 1249, 1272
BspT107I GGYRCC 1 cut(s) 2261
BspTI CTTAAG 1 cut(s) 2498
BspTNI GGTCTC 1 cut(s) 2423
BsrDI GCAATG 1 cut(s) 1541
BsrGI TGTACA 1 cut(s) 2574
BsrI ACTGG 4 cut(s) 577, 871, 2168, 2470
BssECI CCNNGG 3 cut(s) 1312, 1702, 2428
BssMI GATC 8 cut(s) 121, 268, 415, 628, 700, 925, 1241, 1264
BssT1I CCWWGG 3 cut(s) 1312, 1702, 2428
Bst2UI CCWGG 4 cut(s) 424, 1256, 2343, 2534
Bst4CI ACNGT 6 cut(s) 1436, 1614, 1679, 1782, 2356, 2569
BstAFI CTTAAG 1 cut(s) 2498
BstAUI TGTACA 1 cut(s) 2574
BstC8I GCNNGC 4 cut(s) 545, 680, 1877, 2197
BstDSI CCRYGG 1 cut(s) 1312
BstF5I GGATG 3 cut(s) 657, 1536, 2481
BstFNI CGCG 3 cut(s) 918, 1385, 2375
BstHHI GCGC 1 cut(s) 1385
BstKTI GATC 8 cut(s) 124, 271, 418, 631, 703, 928, 1244, 1267
BstMAI GTCTC 3 cut(s) 477, 509, 2423
BstMBI GATC 8 cut(s) 121, 268, 415, 628, 700, 925, 1241, 1264
BstMWI GCNNNNNNNGC 2 cut(s) 1164, 1602
BstNI CCWGG 4 cut(s) 424, 1256, 2343, 2534
BstNSI RCATGY 2 cut(s) 496, 682
BstPAI GACNNNNGTC 1 cut(s) 1450
BstSCI CCNGG 5 cut(s) 422, 1004, 1254, 2341, 2532
BstSFI CTRYAG 1 cut(s) 1610
BstSLI GKGCMC 1 cut(s) 1169
BstUI CGCG 3 cut(s) 918, 1385, 2375
BstV1I GCAGC 2 cut(s) 768, 1816
BstV2I GAAGAC 4 cut(s) 661, 1356, 1446, 2121
BstX2I RGATCY 3 cut(s) 700, 925, 1264
BstXI CCANNNNNNTGG 2 cut(s) 1313, 1476
BstYI RGATCY 3 cut(s) 700, 925, 1264
BsuI GTATCC 1 cut(s) 723
BsuRI GGCC 3 cut(s) 529, 1167, 1746
BtgI CCRYGG 1 cut(s) 1312
BtsCI GGATG 3 cut(s) 657, 1536, 2481
BtsI GCAGTG 1 cut(s) 2454
BtsIMutI CAGTG 6 cut(s) 76, 223, 370, 584, 2454, 2463
BtuMI TCGCGA 1 cut(s) 2375
Cac8I GCNNGC 4 cut(s) 545, 680, 1877, 2197
CfoI GCGC 1 cut(s) 1385
Csp6I GTAC 2 cut(s) 956, 2575
CviAII CATG 6 cut(s) 493, 679, 1313, 1637, 1737, 1838
CviQI GTAC 2 cut(s) 956, 2575
DpnI GATC 8 cut(s) 123, 270, 417, 630, 702, 927, 1243, 1266
DpnII GATC 8 cut(s) 121, 268, 415, 628, 700, 925, 1241, 1264
EaeI YGGCCR 2 cut(s) 527, 1744
Ecl136II GAGCTC 1 cut(s) 1107
Eco130I CCWWGG 3 cut(s) 1312, 1702, 2428
Eco24I GRGCYC 2 cut(s) 1109, 1169
Eco31I GGTCTC 1 cut(s) 2423
Eco32I GATATC 1 cut(s) 2169
Eco47I GGWCC 8 cut(s) 74, 221, 368, 653, 882, 1445, 1846, 2318
Eco53kI GAGCTC 1 cut(s) 1107
Eco57I CTGAAG 3 cut(s) 551, 2133, 2255
Eco88I CYCGRG 1 cut(s) 959
EcoICRI GAGCTC 1 cut(s) 1107
EcoO109I RGGNCCY 3 cut(s) 653, 882, 1445
EcoRI GAATTC 2 cut(s) 1009, 2250
EcoRII CCWGG 4 cut(s) 422, 1254, 2341, 2532
EcoRV GATATC 1 cut(s) 2169
EcoT14I CCWWGG 3 cut(s) 1312, 1702, 2428
EcoT38I GRGCYC 2 cut(s) 1109, 1169
ErhI CCWWGG 3 cut(s) 1312, 1702, 2428
FaeI CATG 6 cut(s) 496, 682, 1316, 1640, 1740, 1841
FaqI GGGAC 1 cut(s) 639
FatI CATG 6 cut(s) 492, 678, 1312, 1636, 1736, 1837
FauNDI CATATG 2 cut(s) 58, 205
Fnu4HI GCNGC 2 cut(s) 757, 1830
FokI GGATG 3 cut(s) 644, 1543, 2488
FriOI GRGCYC 2 cut(s) 1109, 1169
Fsp4HI GCNGC 2 cut(s) 757, 1830
FspBI CTAG 6 cut(s) 689, 698, 981, 1230, 1826, 2085
GlaI GCGC 1 cut(s) 1384
GluI GCNGC 2 cut(s) 757, 1830
GsaI CCCAGC 1 cut(s) 1172
GsuI CTGGAG 2 cut(s) 1452, 1941
HaeIII GGCC 3 cut(s) 529, 1167, 1746
HapII CCGG 2 cut(s) 1005, 2039
HhaI GCGC 1 cut(s) 1385
Hin1II CATG 6 cut(s) 496, 682, 1316, 1640, 1740, 1841
Hin6I GCGC 1 cut(s) 1383
HinP1I GCGC 1 cut(s) 1383
HincII GTYRAC 4 cut(s) 607, 771, 1486, 1699
HindII GTYRAC 4 cut(s) 607, 771, 1486, 1699
HindIII AAGCTT 1 cut(s) 2105
HpaII CCGG 2 cut(s) 1005, 2039
HphI GGTGA 2 cut(s) 1777, 1943
HpyAV CCTTC 9 cut(s) 137, 284, 596, 644, 716, 1468, 1674, 1819, 2342
HpyCH4III ACNGT 6 cut(s) 1436, 1614, 1679, 1782, 2356, 2569
HpyCH4IV ACGT 2 cut(s) 901, 1101
HpyF10VI GCNNNNNNNGC 2 cut(s) 1164, 1602
HpySE526I ACGT 2 cut(s) 901, 1101
Hsp92II CATG 6 cut(s) 496, 682, 1316, 1640, 1740, 1841
HspAI GCGC 1 cut(s) 1383
Kpn2I TCCGGA 1 cut(s) 2038
Kzo9I GATC 8 cut(s) 121, 268, 415, 628, 700, 925, 1241, 1264
LmnI GCTCC 2 cut(s) 1471, 1513
Lsp1109I GCAGC 2 cut(s) 768, 1816
LweI GCATC 2 cut(s) 343, 1521
MaeI CTAG 6 cut(s) 689, 698, 981, 1230, 1826, 2085
MaeII ACGT 2 cut(s) 901, 1101
MaeIII GTNAC 4 cut(s) 581, 691, 912, 2461
MalI GATC 8 cut(s) 123, 270, 417, 630, 702, 927, 1243, 1266
MboI GATC 8 cut(s) 121, 268, 415, 628, 700, 925, 1241, 1264
MboII GAAGA 7 cut(s) 465, 661, 1356, 1446, 2126, 2143, 2259
MfeI CAATTG 4 cut(s) 35, 182, 329, 788
MflI RGATCY 3 cut(s) 700, 925, 1264
MhlI GDGCHC 3 cut(s) 1109, 1169, 1468
MlsI TGGCCA 2 cut(s) 529, 1746
MluI ACGCGT 1 cut(s) 916
MluNI TGGCCA 2 cut(s) 529, 1746
MlyI GAGTC 5 cut(s) 40, 187, 511, 773, 803
MmeI TCCRAC 5 cut(s) 1508, 1536, 1701, 2008, 2118
Mox20I TGGCCA 2 cut(s) 529, 1746
MroI TCCGGA 1 cut(s) 2038
MscI TGGCCA 2 cut(s) 529, 1746
MseI TTAA 8 cut(s) 539, 816, 1346, 1794, 2156, 2201, 2280, 2499
MslI CAYNNNNRTG 1 cut(s) 677
Msp20I TGGCCA 2 cut(s) 529, 1746
MspA1I CMGCKG 1 cut(s) 2326
MspCI CTTAAG 1 cut(s) 2498
MspI CCGG 2 cut(s) 1005, 2039
MspR9I CCNGG 5 cut(s) 424, 1006, 1256, 2343, 2534
MunI CAATTG 4 cut(s) 35, 182, 329, 788
MvaI CCWGG 4 cut(s) 424, 1256, 2343, 2534
MvnI CGCG 3 cut(s) 918, 1385, 2375
MwoI GCNNNNNNNGC 2 cut(s) 1164, 1602
NciI CCSGG 1 cut(s) 1006
NcoI CCATGG 1 cut(s) 1312
NdeI CATATG 2 cut(s) 58, 205
NdeII GATC 8 cut(s) 121, 268, 415, 628, 700, 925, 1241, 1264
NlaIII CATG 6 cut(s) 496, 682, 1316, 1640, 1740, 1841
NlaIV GGNNCC 4 cut(s) 655, 883, 1167, 2263
NmuCI GTSAC 1 cut(s) 2461
NruI TCGCGA 1 cut(s) 2375
NspI RCATGY 2 cut(s) 496, 682
PaeI GCATGC 1 cut(s) 682
PfoI TCCNGGA 4 cut(s) 422, 1004, 2341, 2532
PkrI GCNGC 2 cut(s) 758, 1831
PleI GAGTC 5 cut(s) 39, 186, 511, 772, 803
PpsI GAGTC 5 cut(s) 39, 186, 511, 772, 803
PpuMI RGGWCCY 3 cut(s) 653, 882, 1445
PshAI GACNNNNGTC 1 cut(s) 1450
Psp124BI GAGCTC 1 cut(s) 1109
Psp5II RGGWCCY 3 cut(s) 653, 882, 1445
Psp6I CCWGG 4 cut(s) 422, 1254, 2341, 2532
PspFI CCCAGC 1 cut(s) 1168
PspGI CCWGG 4 cut(s) 422, 1254, 2341, 2532
PspN4I GGNNCC 4 cut(s) 655, 883, 1167, 2263
PspOMI GGGCCC 1 cut(s) 1165
PspPPI RGGWCCY 3 cut(s) 653, 882, 1445
PsuI RGATCY 3 cut(s) 700, 925, 1264
RruI TCGCGA 1 cut(s) 2375
RsaI GTAC 2 cut(s) 957, 2576
RsaNI GTAC 2 cut(s) 956, 2575
RseI CAYNNNNRTG 1 cut(s) 677
SacI GAGCTC 1 cut(s) 1109
SaqAI TTAA 8 cut(s) 539, 816, 1346, 1794, 2156, 2201, 2280, 2499
SatI GCNGC 2 cut(s) 757, 1830
Sau3AI GATC 8 cut(s) 121, 268, 415, 628, 700, 925, 1241, 1264
SchI GAGTC 5 cut(s) 40, 187, 511, 773, 803
ScrFI CCNGG 5 cut(s) 424, 1006, 1256, 2343, 2534
SduI GDGCHC 3 cut(s) 1109, 1169, 1468
SfaNI GCATC 2 cut(s) 343, 1521
SfcI CTRYAG 1 cut(s) 1610
SinI GGWCC 8 cut(s) 74, 221, 368, 653, 882, 1445, 1846, 2318
SmiMI CAYNNNNRTG 1 cut(s) 677
SmlI CTYRAG 6 cut(s) 452, 478, 487, 845, 859, 2498
SmoI CTYRAG 6 cut(s) 452, 478, 487, 845, 859, 2498
SphI GCATGC 1 cut(s) 682
SsiI CCGC 4 cut(s) 1902, 2324, 2484, 2590
SspI AATATT 3 cut(s) 802, 993, 1864
SspMI CTAG 6 cut(s) 689, 698, 981, 1230, 1826, 2085
SstI GAGCTC 1 cut(s) 1109
StyD4I CCNGG 5 cut(s) 422, 1004, 1254, 2341, 2532
StyI CCWWGG 3 cut(s) 1312, 1702, 2428
TaaI ACNGT 6 cut(s) 1436, 1614, 1679, 1782, 2356, 2569
TaiI ACGT 2 cut(s) 904, 1104
TaqI TCGA 3 cut(s) 414, 1337, 1427
TatI WGTACW 1 cut(s) 2574
Tru1I TTAA 8 cut(s) 539, 816, 1346, 1794, 2156, 2201, 2280, 2499
Tru9I TTAA 8 cut(s) 539, 816, 1346, 1794, 2156, 2201, 2280, 2499
TscAI CASTG 6 cut(s) 76, 223, 370, 584, 2454, 2470
TseFI GTSAC 1 cut(s) 2461
TseI GCWGC 2 cut(s) 756, 1829
Tsp45I GTSAC 1 cut(s) 2461
TspDTI ATGAA 6 cut(s) 7, 154, 301, 1316, 1826, 2144
TspGWI ACGGA 1 cut(s) 623
TspRI CASTG 6 cut(s) 76, 223, 370, 584, 2454, 2470
Vha464I CTTAAG 1 cut(s) 2498
VpaK11BI GGWCC 8 cut(s) 74, 221, 368, 653, 882, 1445, 1846, 2318
XapI RAATTY 6 cut(s) 14, 505, 1009, 2034, 2178, 2250
XbaI TCTAGA 1 cut(s) 2084
XceI RCATGY 2 cut(s) 496, 682
XcmI CCANNNNNNNNNTGG 1 cut(s) 1840
XspI CTAG 6 cut(s) 689, 698, 981, 1230, 1826, 2085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.