MD07G1139300.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
20189797 .. 20192986
3190 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1139300.v1.1.491

Sequence Viewer

Length: 2439 bp
ATGCAGGGCGAGGGAATTATGTGCTTCAAACTATTTCATGCTTCAATATTTGCTGTGCTAATTATGTTACAATGTTGCAACCATTCCCTATCCATGGATTTCAGTAATATTTCTTCTGGAGTAGTTGGCCACAGGGATATTGCTAAGGTGCCCAAGGTGATCAGGTGCATACAGAGAGAAAGGGAAGCACTCCTTGCTTTCAAACGAGGCCTTGTGGTTGATTACAGTCTCCTCTCTTCCTGGGGAAGCGAAGCCCAAAAACAAGAGTGTTGCATATGGGAAGGAGTCTACTGCGACAAATATACCGGCCATGTTGTCAAACTTGATCCCCGTGTAGCTCTTGGTGGTCGATTATCAAGTCAGGTTGGAAACCTTACCCACTTGCAATATCTCGATCTCAGCGACAATGACTTTGCTAGTGTTGAAAATCTTAATTCATGGCTCCCTCGCCTTTCATCGTTAACCTATTTGGATCTCAGTGGGAGCAATCTCAGTAATTCTTATGACTGGCTGGAAGCAATTAATATGCTCCCTAAACTTACAAACTTGTCATTGGCTGGATGTGGTCTTCCTTCTCCTCTTATTCATTCCAGTACTCTTTTTAACATAAATTCTTCTAAGTCTCTTGCTCATGTTGACCTCTCTTCCAACCAACTTACTTCTTCAATATTTTTATGGTTGTCAAACTACAGTACCAACCTTGTTATTCTCAAACTCTCTTACAACCAATTAACTGGTTCGATTCCCCATGTTTTAGGACACATGAGCTCTCTTGCGTATCTTTATCTCTCTGATAACCAAATTGAAGGAGGGATTCCGAAATCTTTTTCCAGGTTATGTAATCTGCAACGATTGTTCCTTTACAACAACACTTTGGAAGGGTTGGTTTCAGAGAGCCATTTCTCCAATCTCTCCAGATTAACTCATTTGGATTTGTCCTCCAACTCACTAGCTTTAAGCTTCAATTCTAATTGGGTTCCTCCTTTCCAATTGGATTACATAGCATTGGGCTCTTGCAAGATGGGTCCACATTTTCCCAAATGGCTTCAAACTCAAAAAAATTATCAGATTCTTGAAATTTCTAATACAGGAATTTCTGATATCCTTCCAAGTTGGTTTTGGGACGGGCTGTCTCATTATCCAGAAGAAGATTATTTATATATAGATGTCTCCAACAACCAAATTAGAGGAATAATACCTGACTCAGGATTTGAGTTTCCCTCATCTTTCATTATTCGAGTGAATTTGAGTAGGAACCAATTGGAAGGTCCGATCCCTTCATTCCTTTCCAAAGTGTCGTTTCTCGATCTCTCCAACAATAAGTTTTCAGGGTTAATTTCTTTCTTGTGCCCAGACAAGGTTAGTAATTTAACCTATCTTGATCTCTCAAACAACAATTTACACATACAAATTCCTAATTGCTGGACAAATTTTGCAAATCTAGCCATTCTTGATTTGAGTAACAATGCTCTTTTTGGAAAAATTCCTACCACAATGGGCTCTTTATTTTCAATTCATACATTGAAGCTGAATAAGAATAGATTTGTGGGAGAATTGCCTTCATCCTTAAAGAATTGGACAAGGCTCGTAGTCTTTGATGTTGGACACAATAATTTATCAGGAATGTTACCTAAATGGTTAGGGGTTGAACTTCCAAAGTTGGCTATCCTTATCCTCCGTTCTAATCACTTTTATGGAAACATTCCCCTGCACTTATGTAATCTAAAACAGATTCAAATCCTAGATCTCTCGATAAACAATATCTCTGGAAGTATACCCAAATGCTTCAGCAATTTGACTAAATTGACAGAAATAGGAAATTCAAATCTAACTGTCCATCTTGAGTTTGGCGGTACCAACAGCAAGTTTTCCTGGCGCAGCGTTTATGAAGATGAAACATCCTTGATATGGAAAGGCATAATGTCCAAATACAAAAGTACTTTGGGGCTTGTAAAGAGTATTCATCTATCGAGCAATCAATTAACTGGGGAGATTCCTAATGAAATCGCTGATCTTGTTGGGTTGGTTTCTTTAAACTTGTCGAGAAACAATTTAACAGGTCAAATAACTCCAGAGATCGGGAAATTGCAGTCATTAGATTCGCTTGATTTGTCAAACAACCAAATACATGGTACAATTCCAACAAGTCTTTTTCAAATATCTGGCCTTGGTAAGTTGGACCTGTCAAACAACAACCTGTTTGGAAGAATTCCAATGGGGACTCGGCTCCAAAACTATGATCCCTCTGCTTTTGCTGGGAATCCTCTACTTTGTGGAATTCCACTTCAACAGTTGTGCTCTCTAGAGGAAACAAGTCCAGAGGAGCCACCCGTGTTTAGGGATCAAGTTGAAGACAATGATGGGTTTATAACACTGGGATTTTTTGTGAGTTTGGCACTTGGGTTTGTTGTTGGATTTTGGGGAGTTGTGGGAGTTTAA

Protein Analysis

813

Amino Acids

90.15

Weight (kDa)

6.16

Isoelectric Point (pI)

32.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 59 - 99 1.9e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 116 - 273 1.5e-06 Leucine-rich repeat region
LRR_8 PF13855 208 - 268 3.1e-07 Leucine rich repeat
LRR_8 PF13855 273 - 317 5e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2369
Acc65I GGTACC 1 cut(s) 1853
AccB1I GGYRCC 2 cut(s) 148, 1853
AccI GTMKAC 2 cut(s) 288, 1774
AciI CCGC 1 cut(s) 1851
AclWI GGATC 5 cut(s) 320, 480, 1267, 2234, 2349
AcoI YGGCCR 2 cut(s) 127, 307
AcuI CTGAAG 1 cut(s) 1771
AfaI GTAC 5 cut(s) 595, 694, 1855, 1939, 2134
AfiI CCNNNNNNNGG 6 cut(s) 94, 1205, 1357, 1908, 2078, 2337
AhdI GACNNNNNGTC 1 cut(s) 1129
AjnI CCWGG 3 cut(s) 239, 830, 1871
AluBI AGCT 5 cut(s) 338, 768, 953, 960, 1528
AluI AGCT 5 cut(s) 338, 768, 953, 960, 1528
Alw21I GWGCWC 2 cut(s) 770, 2300
Alw26I GTCTC 4 cut(s) 233, 627, 1137, 1174
AlwI GGATC 5 cut(s) 320, 480, 1267, 2234, 2349
AoxI GGCC 4 cut(s) 127, 208, 307, 2164
ApeKI GCWGC 1 cut(s) 1878
ArsI GACNNNNNNTTYG 4 cut(s) 395, 427, 1193, 1225
AseI ATTAAT 1 cut(s) 522
Asp718I GGTACC 1 cut(s) 1853
AspLEI GCGC 1 cut(s) 1878
AspS9I GGNCC 3 cut(s) 1025, 1268, 2179
AsuHPI GGTGA 1 cut(s) 169
AvaII GGWCC 3 cut(s) 1025, 1268, 2179
BaeGI GKGCMC 2 cut(s) 153, 1352
BaeI ACNNNNGTAYC 2 cut(s) 676, 709
BalI TGGCCA 1 cut(s) 129
BanI GGYRCC 2 cut(s) 148, 1853
BanII GRGCYC 3 cut(s) 770, 1013, 1502
BarI GAAGNNNNNNTAC 2 cut(s) 97, 129
BbsI GAAGAC 2 cut(s) 560, 2358
Bbv12I GWGCWC 2 cut(s) 770, 2300
BbvI GCAGC 1 cut(s) 1890
BccI CCATC 3 cut(s) 1015, 1845, 2354
BciT130I CCWGG 3 cut(s) 241, 832, 1873
BclI TGATCA 1 cut(s) 159
BcoDI GTCTC 4 cut(s) 233, 627, 1137, 1174
BfaI CTAG 5 cut(s) 417, 950, 1442, 1742, 2303
BfmI CTRYAG 1 cut(s) 688
BglII AGATCT 1 cut(s) 1744
BisI GCNGC 1 cut(s) 1879
BlsI GCNGC 1 cut(s) 1880
BmcAI AGTACT 2 cut(s) 595, 1939
Bme1390I CCNGG 3 cut(s) 241, 832, 1873
Bme18I GGWCC 3 cut(s) 1025, 1268, 2179
BmeRI GACNNNNNGTC 1 cut(s) 1129
BmgT120I GGNCC 3 cut(s) 1025, 1268, 2179
BmiI GGNNCC 8 cut(s) 150, 443, 978, 1026, 1256, 1855, 2228, 2325
BmrFI CCNGG 3 cut(s) 241, 832, 1873
BmrI ACTGGG 2 cut(s) 1995, 2384
BmuI ACTGGG 2 cut(s) 1995, 2384
BpiI GAAGAC 2 cut(s) 560, 2358
BplI GAGNNNNNCTC 2 cut(s) 1205, 1237
BpmI CTGGAG 3 cut(s) 138, 898, 2055
Bpu10I CCTNAGC 1 cut(s) 144
BpuEI CTTGAG 1 cut(s) 1862
BsaBI GATNNNNATC 1 cut(s) 1736
BsaJI CCNNGG 4 cut(s) 93, 153, 240, 2167
Bsc4I CCNNNNNNNGG 6 cut(s) 94, 1205, 1357, 1908, 2078, 2337
Bse118I RCCGGY 1 cut(s) 305
Bse1I ACTGG 5 cut(s) 512, 591, 739, 1990, 2379
Bse8I GATNNNNATC 1 cut(s) 1736
BseBI CCWGG 3 cut(s) 241, 832, 1873
BseDI CCNNGG 4 cut(s) 93, 153, 240, 2167
BseGI GGATG 3 cut(s) 566, 1562, 1898
BseJI GATNNNNATC 1 cut(s) 1736
BseLI CCNNNNNNNGG 6 cut(s) 94, 1205, 1357, 1908, 2078, 2337
BseMII CTCAG 4 cut(s) 412, 490, 505, 1218
BseNI ACTGG 5 cut(s) 512, 591, 739, 1990, 2379
BseRI GAGGAG 3 cut(s) 221, 567, 2336
BseSI GKGCMC 2 cut(s) 153, 1352
BseXI GCAGC 1 cut(s) 1890
BseYI CCCAGC 1 cut(s) 2255
BsgI GTGCAG 1 cut(s) 1694
BshFI GGCC 4 cut(s) 129, 210, 309, 2166
BshNI GGYRCC 2 cut(s) 148, 1853
BsiHKAI GWGCWC 2 cut(s) 770, 2300
BsiSI CCGG 1 cut(s) 306
BslFI GGGAC 2 cut(s) 1136, 2233
BslI CCNNNNNNNGG 6 cut(s) 94, 1205, 1357, 1908, 2078, 2337
BsmAI GTCTC 4 cut(s) 233, 627, 1137, 1174
BsmFI GGGAC 2 cut(s) 1136, 2233
BsnI GGCC 4 cut(s) 129, 210, 309, 2166
Bsp1286I GDGCHC 6 cut(s) 153, 770, 1013, 1352, 1502, 2300
Bsp19I CCATGG 1 cut(s) 93
BspACI CCGC 1 cut(s) 1851
BspANI GGCC 4 cut(s) 129, 210, 309, 2166
BspCNI CTCAG 4 cut(s) 411, 489, 504, 1217
BspLI GGNNCC 8 cut(s) 150, 443, 978, 1026, 1256, 1855, 2228, 2325
BspPI GGATC 5 cut(s) 320, 480, 1267, 2234, 2349
BspT107I GGYRCC 2 cut(s) 148, 1853
BsrFI RCCGGY 1 cut(s) 305
BsrI ACTGG 5 cut(s) 512, 591, 739, 1990, 2379
BssAI RCCGGY 1 cut(s) 305
BssECI CCNNGG 4 cut(s) 93, 153, 240, 2167
BssNAI GTATAC 1 cut(s) 1775
BssT1I CCWWGG 3 cut(s) 93, 153, 2167
Bst1107I GTATAC 1 cut(s) 1775
Bst2UI CCWGG 3 cut(s) 241, 832, 1873
Bst4CI ACNGT 4 cut(s) 227, 692, 1834, 2292
Bst6I CTCTTC 2 cut(s) 241, 649
BstAPI GCANNNNNTGC 1 cut(s) 194
BstDEI CTNAG 6 cut(s) 144, 398, 476, 491, 618, 1204
BstDSI CCRYGG 1 cut(s) 93
BstENI CCTNNNNNAGG 1 cut(s) 1203
BstF5I GGATG 3 cut(s) 566, 1562, 1898
BstHHI GCGC 1 cut(s) 1878
BstMAI GTCTC 4 cut(s) 233, 627, 1137, 1174
BstMWI GCNNNNNNNGC 2 cut(s) 194, 1442
BstNI CCWGG 3 cut(s) 241, 832, 1873
BstSCI CCNGG 3 cut(s) 239, 830, 1871
BstSFI CTRYAG 1 cut(s) 688
BstSLI GKGCMC 2 cut(s) 153, 1352
BstV1I GCAGC 1 cut(s) 1890
BstV2I GAAGAC 2 cut(s) 560, 2358
BstX2I RGATCY 2 cut(s) 472, 1744
BstXI CCANNNNNNTGG 2 cut(s) 734, 2129
BstYI RGATCY 2 cut(s) 472, 1744
BstZ17I GTATAC 1 cut(s) 1775
BsuRI GGCC 4 cut(s) 129, 210, 309, 2166
BtgI CCRYGG 1 cut(s) 93
BtsCI GGATG 3 cut(s) 566, 1562, 1898
BtsIMutI CAGTG 2 cut(s) 484, 2372
CfoI GCGC 1 cut(s) 1878
Cfr10I RCCGGY 1 cut(s) 305
Cfr13I GGNCC 3 cut(s) 1025, 1268, 2179
Csp6I GTAC 5 cut(s) 594, 693, 1854, 1938, 2133
CviAII CATG 8 cut(s) 38, 94, 311, 438, 632, 749, 763, 2129
CviQI GTAC 5 cut(s) 594, 693, 1854, 1938, 2133
DdeI CTNAG 6 cut(s) 144, 398, 476, 491, 618, 1204
DraI TTTAAA 1 cut(s) 2034
DriI GACNNNNNGTC 1 cut(s) 1129
EaeI YGGCCR 2 cut(s) 127, 307
Eam1104I CTCTTC 2 cut(s) 241, 649
Eam1105I GACNNNNNGTC 1 cut(s) 1129
EarI CTCTTC 2 cut(s) 241, 649
Ecl136II GAGCTC 1 cut(s) 768
Eco130I CCWWGG 3 cut(s) 93, 153, 2167
Eco147I AGGCCT 1 cut(s) 210
Eco24I GRGCYC 3 cut(s) 770, 1013, 1502
Eco32I GATATC 1 cut(s) 1102
Eco47I GGWCC 3 cut(s) 1025, 1268, 2179
Eco53kI GAGCTC 1 cut(s) 768
Eco57I CTGAAG 1 cut(s) 1771
EcoICRI GAGCTC 1 cut(s) 768
EcoNI CCTNNNNNAGG 1 cut(s) 1203
EcoRI GAATTC 2 cut(s) 2208, 2277
EcoRII CCWGG 3 cut(s) 239, 830, 1871
EcoRV GATATC 1 cut(s) 1102
EcoT14I CCWWGG 3 cut(s) 93, 153, 2167
EcoT38I GRGCYC 3 cut(s) 770, 1013, 1502
ErhI CCWWGG 3 cut(s) 93, 153, 2167
FaeI CATG 8 cut(s) 41, 97, 314, 441, 635, 752, 766, 2132
FalI AAGNNNNNCTT 2 cut(s) 177, 209
FaqI GGGAC 2 cut(s) 1136, 2233
FatI CATG 8 cut(s) 37, 93, 310, 437, 631, 748, 762, 2128
FauNDI CATATG 1 cut(s) 275
FbaI TGATCA 1 cut(s) 159
FblI GTMKAC 2 cut(s) 288, 1774
Fnu4HI GCNGC 1 cut(s) 1879
FokI GGATG 3 cut(s) 573, 1549, 1885
FriOI GRGCYC 3 cut(s) 770, 1013, 1502
Fsp4HI GCNGC 1 cut(s) 1879
FspBI CTAG 5 cut(s) 417, 950, 1442, 1742, 2303
GlaI GCGC 1 cut(s) 1877
GluI GCNGC 1 cut(s) 1879
GsaI CCCAGC 1 cut(s) 2259
GsuI CTGGAG 3 cut(s) 138, 898, 2055
HaeIII GGCC 4 cut(s) 129, 210, 309, 2166
HapII CCGG 1 cut(s) 306
HhaI GCGC 1 cut(s) 1878
Hin1II CATG 8 cut(s) 41, 97, 314, 441, 635, 752, 766, 2132
Hin6I GCGC 1 cut(s) 1876
HinP1I GCGC 1 cut(s) 1876
HincII GTYRAC 2 cut(s) 462, 637
HindII GTYRAC 2 cut(s) 462, 637
HindIII AAGCTT 1 cut(s) 958
HpaI GTTAAC 1 cut(s) 462
HpaII CCGG 1 cut(s) 306
HphI GGTGA 1 cut(s) 169
Hpy166II GTNNAC 5 cut(s) 289, 462, 637, 1028, 1775
Hpy188I TCNGA 6 cut(s) 793, 819, 892, 1068, 1099, 1272
Hpy8I GTNNAC 5 cut(s) 289, 462, 637, 1028, 1775
HpyAV CCTTC 8 cut(s) 275, 582, 800, 872, 1115, 1259, 1287, 1569
HpyCH4III ACNGT 4 cut(s) 227, 692, 1834, 2292
HpyF10VI GCNNNNNNNGC 2 cut(s) 194, 1442
HpyF3I CTNAG 6 cut(s) 144, 398, 476, 491, 618, 1204
Hsp92II CATG 8 cut(s) 41, 97, 314, 441, 635, 752, 766, 2132
HspAI GCGC 1 cut(s) 1876
KpnI GGTACC 1 cut(s) 1857
Ksp22I TGATCA 1 cut(s) 159
KspAI GTTAAC 1 cut(s) 462
LmnI GCTCC 5 cut(s) 447, 483, 534, 2232, 2323
Lsp1109I GCAGC 1 cut(s) 1890
MaeI CTAG 5 cut(s) 417, 950, 1442, 1742, 2303
MaeIII GTNAC 3 cut(s) 66, 1460, 1626
MfeI CAATTG 2 cut(s) 989, 1259
MflI RGATCY 2 cut(s) 472, 1744
MhlI GDGCHC 6 cut(s) 153, 770, 1013, 1352, 1502, 2300
MlsI TGGCCA 1 cut(s) 129
MluNI TGGCCA 1 cut(s) 129
MlyI GAGTC 3 cut(s) 294, 1196, 2215
MmeI TCCRAC 9 cut(s) 346, 672, 966, 1197, 1338, 1582, 2157, 2165, 2392
Mox20I TGGCCA 1 cut(s) 129
MscI TGGCCA 1 cut(s) 129
MslI CAYNNNNRTG 1 cut(s) 1692
Msp20I TGGCCA 1 cut(s) 129
MspI CCGG 1 cut(s) 306
MspR9I CCNGG 3 cut(s) 241, 832, 1873
MunI CAATTG 2 cut(s) 989, 1259
MvaI CCWGG 3 cut(s) 241, 832, 1873
MwoI GCNNNNNNNGC 2 cut(s) 194, 1442
NcoI CCATGG 1 cut(s) 93
NdeI CATATG 1 cut(s) 275
NlaIII CATG 8 cut(s) 41, 97, 314, 441, 635, 752, 766, 2132
NlaIV GGNNCC 8 cut(s) 150, 443, 978, 1026, 1256, 1855, 2228, 2325
NmeAIII GCCGAG 1 cut(s) 2203
PceI AGGCCT 1 cut(s) 210
PcsI WCGNNNNNNNCGW 1 cut(s) 399
PfeI GAWTC 7 cut(s) 742, 814, 1069, 1732, 1993, 2099, 2260
PkrI GCNGC 1 cut(s) 1880
PleI GAGTC 3 cut(s) 293, 1196, 2215
PpsI GAGTC 3 cut(s) 293, 1196, 2215
PshBI ATTAAT 1 cut(s) 522
PsiI TTATAA 1 cut(s) 2369
Psp124BI GAGCTC 1 cut(s) 770
Psp6I CCWGG 3 cut(s) 239, 830, 1871
PspFI CCCAGC 1 cut(s) 2255
PspGI CCWGG 3 cut(s) 239, 830, 1871
PspN4I GGNNCC 8 cut(s) 150, 443, 978, 1026, 1256, 1855, 2228, 2325
PspPI GGNCC 3 cut(s) 1025, 1268, 2179
PsuI RGATCY 2 cut(s) 472, 1744
RsaI GTAC 5 cut(s) 595, 694, 1855, 1939, 2134
RsaNI GTAC 5 cut(s) 594, 693, 1854, 1938, 2133
RseI CAYNNNNRTG 1 cut(s) 1692
SacI GAGCTC 1 cut(s) 770
SatI GCNGC 1 cut(s) 1879
Sau96I GGNCC 3 cut(s) 1025, 1268, 2179
ScaI AGTACT 2 cut(s) 595, 1939
SchI GAGTC 3 cut(s) 294, 1196, 2215
ScrFI CCNGG 3 cut(s) 241, 832, 1873
SduI GDGCHC 6 cut(s) 153, 770, 1013, 1352, 1502, 2300
SfcI CTRYAG 1 cut(s) 688
SinI GGWCC 3 cut(s) 1025, 1268, 2179
SmiMI CAYNNNNRTG 1 cut(s) 1692
SmlI CTYRAG 1 cut(s) 1841
SmoI CTYRAG 1 cut(s) 1841
SseBI AGGCCT 1 cut(s) 210
SsiI CCGC 1 cut(s) 1851
SspI AATATT 3 cut(s) 48, 109, 669
SspMI CTAG 5 cut(s) 417, 950, 1442, 1742, 2303
SstI GAGCTC 1 cut(s) 770
StuI AGGCCT 1 cut(s) 210
StyD4I CCNGG 3 cut(s) 239, 830, 1871
StyI CCWWGG 3 cut(s) 93, 153, 2167
TaaI ACNGT 4 cut(s) 227, 692, 1834, 2292
TaqI TCGA 8 cut(s) 349, 393, 740, 1237, 1305, 1751, 1970, 2042
TatI WGTACW 2 cut(s) 593, 1937
TfiI GAWTC 7 cut(s) 742, 814, 1069, 1732, 1993, 2099, 2260
TscAI CASTG 2 cut(s) 484, 2379
TseI GCWGC 1 cut(s) 1878
TspGWI ACGGA 1 cut(s) 1667
TspRI CASTG 2 cut(s) 484, 2379
VpaK11BI GGWCC 3 cut(s) 1025, 1268, 2179
VspI ATTAAT 1 cut(s) 522
XagI CCTNNNNNAGG 1 cut(s) 1203
XbaI TCTAGA 1 cut(s) 2302
XcmI CCANNNNNNNNNTGG 2 cut(s) 1116, 1844
XmiI GTMKAC 2 cut(s) 288, 1774
XspI CTAG 5 cut(s) 417, 950, 1442, 1742, 2303
ZrmI AGTACT 2 cut(s) 595, 1939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.