Rh1CG239800

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
49912474 .. 49921649
9176 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG239800.1

Sequence Viewer

Length: 1209 bp
ATGAGCTCACTTGAAAGTCTTGGCCTCTCTGCCAACCAACTAAGTGGTTTGATTCCCAATTCTTTTAGGAACATGAGCTCACTTGCATATCTTGATCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGCACATCTTGACATCTCTTATAACCCATTCGGAGGAGGGATCCCAGCATCCATTGGCCAGTTATGCAGTTTGCGACTCGTTTTGAGGTCTTGTAAGGTGGGGCCGGATTTCCCAAAATGGCTTCGAACCCAAAAAGTTCTTTTCTACCTTGACATGTCTGATGGTGACATTTCAGATGTCCCTCCAAGCTGGTTCTGGGGTCTATTTGGTGACGGTTCGACTATAGATCTGTCTAACAATCAAATTAGAGGAACATTAGGGAGTTCAGAGGCTGTATCATTCAGCGGAGTTGAAGTTCGATTTAGTTCGAACCAGTTGGAAGGTCCAATACCCTCATTTCTATCAAAAGCGTCATATTTGGATCTCTCTGATAATAAATTTTCAGAGATGACTTCCTTCTTGTGTTCTGCGAATGTTAAAATTTCTAAATTTCTTGATCTCTCCACAAACAATATTCCTGGAGAAGTTCCAGATTGCTGGGGACATTGGGTCAATCTAGAACTTCTCGATTTGAGTAACAATTCTTTTTCTGGGAAAATCCCACCCAATATAGGATGTTTACTTCGAATCAAAACATTGAAATTAAGGAGCAACAGACTTGTGGGAGAATTGCCTTCATCCTTGAAGAATTGTACAAGCTTAAATGTTATTGATCTTGGGAACAATACGCTTTCAAGTTCAGTCCCTGAATGGTTAGGGCGCCAGCATCTTCTGAAACAAGCGCTTCCTTTCAATTGTGCACATCACATACTTGCGCTGTACAATCATCTGCTCAAGTCTTCAAGTATACAGGGGTTTAGTAACCTTCTTGTTCGGCATATGTCAAGATGGGAAGGAGTCTACTATGACCCCCTGACCGACCATGTGATTCAACTTCATCTTGGAGGAGTCTCTTCACAAGGTGAGTTTTTTAAAGGTAAAGGTAGTCTTAATCTCATTGAGGCGCAGCAGCTGAAATATTTGGACCTCAGTCACAATGACTTCAATGGGAGCCAAATTCCAGCGCTCATTTGCTCTATGTCCAATTTAAGACCTACATCTCAACTCCAATGA

Protein Analysis

402

Amino Acids

44.07

Weight (kDa)

6.36

Isoelectric Point (pI)

44.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 3 - 61 2.4e-15 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 177
AccB1I GGYRCC 1 cut(s) 855
AccI GTMKAC 2 cut(s) 943, 996
AciI CCGC 1 cut(s) 441
AclWI GGATC 3 cut(s) 190, 203, 525
AcoI YGGCCR 1 cut(s) 211
AcsI RAATTY 4 cut(s) 533, 576, 584, 1152
AcyI GRCGYC 1 cut(s) 856
AdeI CACNNNGTG 1 cut(s) 1058
AfaI GTAC 2 cut(s) 790, 917
AfeI AGCGCT 2 cut(s) 879, 1161
AfiI CCNNNNNNNGG 2 cut(s) 188, 707
AflIII ACRYGT 1 cut(s) 309
AgsI TTSAA 9 cut(s) 14, 449, 736, 781, 831, 889, 939, 1028, 1141
AhdI GACNNNNNGTC 1 cut(s) 644
AjnI CCWGG 1 cut(s) 613
AloI GAACNNNNNNTCC 2 cut(s) 435, 467
AluBI AGCT 6 cut(s) 6, 78, 150, 345, 795, 1108
AluI AGCT 6 cut(s) 6, 78, 150, 345, 795, 1108
Alw21I GWGCWC 4 cut(s) 8, 80, 152, 898
Alw26I GTCTC 1 cut(s) 1051
Alw44I GTGCAC 1 cut(s) 894
AlwI GGATC 3 cut(s) 190, 203, 525
AlwNI CAGNNNCTG 3 cut(s) 428, 842, 1108
Aor51HI AGCGCT 2 cut(s) 879, 1161
AoxI GGCC 3 cut(s) 22, 211, 257
ApaLI GTGCAC 1 cut(s) 894
ApeKI GCWGC 2 cut(s) 1102, 1105
ApoI RAATTY 4 cut(s) 533, 576, 584, 1152
AspLEI GCGC 5 cut(s) 858, 880, 913, 1102, 1162
AspS9I GGNCC 3 cut(s) 257, 479, 1120
AsuHPI GGTGA 3 cut(s) 332, 377, 1070
AsuII TTCGAA 3 cut(s) 280, 464, 721
AvaII GGWCC 2 cut(s) 479, 1120
BaeGI GKGCMC 1 cut(s) 898
BalI TGGCCA 1 cut(s) 213
BamHI GGATCC 1 cut(s) 195
BanI GGYRCC 1 cut(s) 855
BanII GRGCYC 3 cut(s) 8, 80, 152
BarI GAAGNNNNNNTAC 2 cut(s) 468, 500
BbsI GAAGAC 1 cut(s) 927
Bbv12I GWGCWC 4 cut(s) 8, 80, 152, 898
BbvI GCAGC 2 cut(s) 1114, 1117
BccI CCATC 2 cut(s) 311, 978
BcgI CGANNNNNNTGC 2 cut(s) 119, 153
BciT130I CCWGG 1 cut(s) 615
BcoDI GTCTC 1 cut(s) 1051
BfaI CTAG 1 cut(s) 653
BfmI CTRYAG 1 cut(s) 378
BfoI RGCGCY 3 cut(s) 859, 881, 1163
BglII AGATCT 1 cut(s) 382
BisI GCNGC 2 cut(s) 1103, 1106
BlsI GCNGC 2 cut(s) 1104, 1107
Bme1390I CCNGG 1 cut(s) 615
Bme18I GGWCC 2 cut(s) 479, 1120
BmeRI GACNNNNNGTC 1 cut(s) 644
BmgT120I GGNCC 3 cut(s) 257, 479, 1120
BmiI GGNNCC 4 cut(s) 197, 258, 857, 1148
BmrFI CCNGG 1 cut(s) 615
BmsI GCATC 3 cut(s) 121, 212, 871
BoxI GACNNNNGTC 1 cut(s) 1125
BpiI GAAGAC 1 cut(s) 927
BpmI CTGGAG 1 cut(s) 636
Bpu14I TTCGAA 3 cut(s) 280, 464, 721
BpuEI CTTGAG 1 cut(s) 914
BsaHI GRCGYC 1 cut(s) 856
BsaXI ACNNNNNCTCC 2 cut(s) 435, 465
Bsc4I CCNNNNNNNGG 2 cut(s) 188, 707
Bse1I ACTGG 2 cut(s) 214, 469
BseBI CCWGG 1 cut(s) 615
BseGI GGATG 3 cut(s) 203, 716, 773
BseLI CCNNNNNNNGG 2 cut(s) 188, 707
BseMII CTCAG 1 cut(s) 1138
BseNI ACTGG 2 cut(s) 214, 469
BseRI GAGGAG 2 cut(s) 204, 1056
BseSI GKGCMC 1 cut(s) 898
BseXI GCAGC 2 cut(s) 1114, 1117
BseYI CCCAGC 2 cut(s) 199, 633
BshFI GGCC 3 cut(s) 24, 213, 259
BshNI GGYRCC 1 cut(s) 855
BsiHKAI GWGCWC 4 cut(s) 8, 80, 152, 898
BsiSI CCGG 1 cut(s) 260
BslFI GGGAC 3 cut(s) 320, 651, 824
BslI CCNNNNNNNGG 2 cut(s) 188, 707
BsmAI GTCTC 1 cut(s) 1051
BsmFI GGGAC 3 cut(s) 320, 651, 824
BsnI GGCC 3 cut(s) 24, 213, 259
Bsp119I TTCGAA 3 cut(s) 280, 464, 721
Bsp1286I GDGCHC 4 cut(s) 8, 80, 152, 898
Bsp1407I TGTACA 2 cut(s) 788, 915
Bsp143I GATC 6 cut(s) 94, 195, 382, 517, 592, 808
BspACI CCGC 1 cut(s) 441
BspANI GGCC 3 cut(s) 24, 213, 259
BspCNI CTCAG 1 cut(s) 1137
BspLI GGNNCC 4 cut(s) 197, 258, 857, 1148
BspPI GGATC 3 cut(s) 190, 203, 525
BspT104I TTCGAA 3 cut(s) 280, 464, 721
BspT107I GGYRCC 1 cut(s) 855
BsrGI TGTACA 2 cut(s) 788, 915
BsrI ACTGG 2 cut(s) 214, 469
BssMI GATC 6 cut(s) 94, 195, 382, 517, 592, 808
BssNAI GTATAC 1 cut(s) 944
BssNI GRCGYC 1 cut(s) 856
Bst1107I GTATAC 1 cut(s) 944
Bst2UI CCWGG 1 cut(s) 615
Bst4CI ACNGT 1 cut(s) 371
Bst6I CTCTTC 2 cut(s) 106, 1054
BstACI GRCGYC 1 cut(s) 856
BstAUI TGTACA 2 cut(s) 788, 915
BstBI TTCGAA 3 cut(s) 280, 464, 721
BstC8I GCNNGC 1 cut(s) 860
BstDEI CTNAG 2 cut(s) 41, 1124
BstF5I GGATG 3 cut(s) 203, 716, 773
BstH2I RGCGCY 3 cut(s) 859, 881, 1163
BstHHI GCGC 5 cut(s) 858, 880, 913, 1102, 1162
BstKTI GATC 6 cut(s) 97, 198, 385, 520, 595, 811
BstMAI GTCTC 1 cut(s) 1051
BstMBI GATC 6 cut(s) 94, 195, 382, 517, 592, 808
BstMWI GCNNNNNNNGC 1 cut(s) 219
BstNI CCWGG 1 cut(s) 615
BstNSI RCATGY 1 cut(s) 313
BstPAI GACNNNNGTC 1 cut(s) 1125
BstSCI CCNGG 1 cut(s) 613
BstSFI CTRYAG 1 cut(s) 378
BstSLI GKGCMC 1 cut(s) 898
BstV1I GCAGC 2 cut(s) 1114, 1117
BstV2I GAAGAC 1 cut(s) 927
BstX2I RGATCY 3 cut(s) 195, 382, 517
BstXI CCANNNNNNTGG 3 cut(s) 44, 116, 633
BstYI RGATCY 3 cut(s) 195, 382, 517
BstZ17I GTATAC 1 cut(s) 944
BsuRI GGCC 3 cut(s) 24, 213, 259
BtsCI GGATG 3 cut(s) 203, 716, 773
Cac8I GCNNGC 1 cut(s) 860
CaiI CAGNNNCTG 3 cut(s) 428, 842, 1108
CfoI GCGC 5 cut(s) 858, 880, 913, 1102, 1162
Cfr13I GGNCC 3 cut(s) 257, 479, 1120
CseI GACGC 1 cut(s) 495
Csp6I GTAC 2 cut(s) 789, 916
CviAII CATG 4 cut(s) 73, 145, 310, 1019
CviQI GTAC 2 cut(s) 789, 916
DdeI CTNAG 2 cut(s) 41, 1124
DinI GGCGCC 1 cut(s) 857
DpnI GATC 6 cut(s) 96, 197, 384, 519, 594, 810
DpnII GATC 6 cut(s) 94, 195, 382, 517, 592, 808
DraI TTTAAA 1 cut(s) 1069
DraIII CACNNNGTG 1 cut(s) 1058
DriI GACNNNNNGTC 1 cut(s) 644
EaeI YGGCCR 1 cut(s) 211
Eam1104I CTCTTC 2 cut(s) 106, 1054
Eam1105I GACNNNNNGTC 1 cut(s) 644
EarI CTCTTC 2 cut(s) 106, 1054
Ecl136II GAGCTC 3 cut(s) 6, 78, 150
Eco24I GRGCYC 3 cut(s) 8, 80, 152
Eco47I GGWCC 2 cut(s) 479, 1120
Eco47III AGCGCT 2 cut(s) 879, 1161
Eco53kI GAGCTC 3 cut(s) 6, 78, 150
EcoICRI GAGCTC 3 cut(s) 6, 78, 150
EcoRII CCWGG 1 cut(s) 613
EcoT38I GRGCYC 3 cut(s) 8, 80, 152
EgeI GGCGCC 1 cut(s) 857
EheI GGCGCC 1 cut(s) 857
FaeI CATG 4 cut(s) 76, 148, 313, 1022
FalI AAGNNNNNCTT 2 cut(s) 1068, 1100
FaqI GGGAC 3 cut(s) 320, 651, 824
FatI CATG 4 cut(s) 72, 144, 309, 1018
FauNDI CATATG 1 cut(s) 975
FblI GTMKAC 2 cut(s) 943, 996
Fnu4HI GCNGC 2 cut(s) 1103, 1106
FokI GGATG 3 cut(s) 190, 723, 760
FriOI GRGCYC 3 cut(s) 8, 80, 152
Fsp4HI GCNGC 2 cut(s) 1103, 1106
FspBI CTAG 1 cut(s) 653
GlaI GCGC 5 cut(s) 857, 879, 912, 1101, 1161
GluI GCNGC 2 cut(s) 1103, 1106
GsaI CCCAGC 2 cut(s) 203, 637
GsuI CTGGAG 1 cut(s) 636
HaeII RGCGCY 3 cut(s) 859, 881, 1163
HaeIII GGCC 3 cut(s) 24, 213, 259
HapII CCGG 1 cut(s) 260
HgaI GACGC 1 cut(s) 495
HhaI GCGC 5 cut(s) 858, 880, 913, 1102, 1162
Hin1I GRCGYC 1 cut(s) 856
Hin1II CATG 4 cut(s) 76, 148, 313, 1022
Hin6I GCGC 5 cut(s) 856, 878, 911, 1100, 1160
HinP1I GCGC 5 cut(s) 856, 878, 911, 1100, 1160
HindIII AAGCTT 1 cut(s) 793
HinfI GANTC 7 cut(s) 52, 124, 231, 723, 993, 1024, 1044
HpaII CCGG 1 cut(s) 260
HphI GGTGA 3 cut(s) 332, 377, 1070
Hpy166II GTNNAC 4 cut(s) 716, 896, 944, 997
Hpy188I TCNGA 7 cut(s) 188, 316, 331, 424, 526, 541, 870
Hpy188III TCNNGA 8 cut(s) 92, 128, 164, 590, 626, 653, 662, 981
Hpy8I GTNNAC 4 cut(s) 716, 896, 944, 997
HpyAV CCTTC 5 cut(s) 470, 562, 780, 971, 983
HpyCH4III ACNGT 1 cut(s) 371
HpyCH4V TGCA 5 cut(s) 86, 140, 158, 222, 896
HpyF10VI GCNNNNNNNGC 1 cut(s) 219
HpyF3I CTNAG 2 cut(s) 41, 1124
Hsp92I GRCGYC 1 cut(s) 856
Hsp92II CATG 4 cut(s) 76, 148, 313, 1022
HspAI GCGC 5 cut(s) 856, 878, 911, 1100, 1160
KasI GGCGCC 1 cut(s) 855
Kzo9I GATC 6 cut(s) 94, 195, 382, 517, 592, 808
LmnI GCTCC 2 cut(s) 744, 1146
Lsp1109I GCAGC 2 cut(s) 1114, 1117
LweI GCATC 3 cut(s) 121, 212, 871
MaeI CTAG 1 cut(s) 653
MaeIII GTNAC 5 cut(s) 320, 365, 671, 956, 1127
MalI GATC 6 cut(s) 96, 197, 384, 519, 594, 810
MboI GATC 6 cut(s) 94, 195, 382, 517, 592, 808
MboII GAAGA 5 cut(s) 93, 793, 857, 927, 1041
MfeI CAATTG 1 cut(s) 889
MflI RGATCY 3 cut(s) 195, 382, 517
MhlI GDGCHC 4 cut(s) 8, 80, 152, 898
MlsI TGGCCA 1 cut(s) 213
MluNI TGGCCA 1 cut(s) 213
Mly113I GGCGCC 1 cut(s) 856
MlyI GAGTC 3 cut(s) 225, 1002, 1053
MmeI TCCRAC 2 cut(s) 129, 453
Mox20I TGGCCA 1 cut(s) 213
MscI TGGCCA 1 cut(s) 213
MseI TTAA 7 cut(s) 113, 573, 740, 797, 1068, 1086, 1184
Msp20I TGGCCA 1 cut(s) 213
MspA1I CMGCKG 2 cut(s) 441, 1108
MspI CCGG 1 cut(s) 260
MspR9I CCNGG 1 cut(s) 615
MunI CAATTG 1 cut(s) 889
MvaI CCWGG 1 cut(s) 615
MwoI GCNNNNNNNGC 1 cut(s) 219
NarI GGCGCC 1 cut(s) 856
NdeI CATATG 1 cut(s) 975
NdeII GATC 6 cut(s) 94, 195, 382, 517, 592, 808
NlaIII CATG 4 cut(s) 76, 148, 313, 1022
NlaIV GGNNCC 4 cut(s) 197, 258, 857, 1148
NmuCI GTSAC 3 cut(s) 320, 365, 1127
NspI RCATGY 1 cut(s) 313
NspV TTCGAA 3 cut(s) 280, 464, 721
PciI ACATGT 1 cut(s) 309
PfeI GAWTC 4 cut(s) 52, 124, 723, 1024
PfoI TCCNGGA 1 cut(s) 613
PkrI GCNGC 2 cut(s) 1104, 1107
PleI GAGTC 3 cut(s) 225, 1001, 1052
PluTI GGCGCC 1 cut(s) 859
PpsI GAGTC 3 cut(s) 225, 1001, 1052
PscI ACATGT 1 cut(s) 309
PshAI GACNNNNGTC 1 cut(s) 1125
PsiI TTATAA 1 cut(s) 177
Psp124BI GAGCTC 3 cut(s) 8, 80, 152
Psp6I CCWGG 1 cut(s) 613
PspFI CCCAGC 2 cut(s) 199, 633
PspGI CCWGG 1 cut(s) 613
PspN4I GGNNCC 4 cut(s) 197, 258, 857, 1148
PspPI GGNCC 3 cut(s) 257, 479, 1120
PstNI CAGNNNCTG 3 cut(s) 428, 842, 1108
PsuI RGATCY 3 cut(s) 195, 382, 517
PvuII CAGCTG 1 cut(s) 1108
RsaI GTAC 2 cut(s) 790, 917
RsaNI GTAC 2 cut(s) 789, 916
SacI GAGCTC 3 cut(s) 8, 80, 152
SaqAI TTAA 7 cut(s) 113, 573, 740, 797, 1068, 1086, 1184
SatI GCNGC 2 cut(s) 1103, 1106
Sau3AI GATC 6 cut(s) 94, 195, 382, 517, 592, 808
Sau96I GGNCC 3 cut(s) 257, 479, 1120
SchI GAGTC 3 cut(s) 225, 1002, 1053
ScrFI CCNGG 1 cut(s) 615
SduI GDGCHC 4 cut(s) 8, 80, 152, 898
SfaNI GCATC 3 cut(s) 121, 212, 871
SfcI CTRYAG 1 cut(s) 378
SfoI GGCGCC 1 cut(s) 857
SfuI TTCGAA 3 cut(s) 280, 464, 721
SinI GGWCC 2 cut(s) 479, 1120
SmlI CTYRAG 1 cut(s) 929
SmoI CTYRAG 1 cut(s) 929
SsiI CCGC 1 cut(s) 441
SspDI GGCGCC 1 cut(s) 855
SspI AATATT 2 cut(s) 610, 1115
SspMI CTAG 1 cut(s) 653
SstI GAGCTC 3 cut(s) 8, 80, 152
StyD4I CCNGG 1 cut(s) 613
TaaI ACNGT 1 cut(s) 371
TaqI TCGA 6 cut(s) 280, 374, 454, 464, 663, 721
TaqII GACCGA 1 cut(s) 1028
TatI WGTACW 2 cut(s) 788, 915
TfiI GAWTC 4 cut(s) 52, 124, 723, 1024
Tru1I TTAA 7 cut(s) 113, 573, 740, 797, 1068, 1086, 1184
Tru9I TTAA 7 cut(s) 113, 573, 740, 797, 1068, 1086, 1184
TseFI GTSAC 3 cut(s) 320, 365, 1127
TseI GCWGC 2 cut(s) 1102, 1105
Tsp45I GTSAC 3 cut(s) 320, 365, 1127
TspDTI ATGAA 2 cut(s) 762, 1022
VneI GTGCAC 1 cut(s) 894
VpaK11BI GGWCC 2 cut(s) 479, 1120
XapI RAATTY 4 cut(s) 533, 576, 584, 1152
XbaI TCTAGA 1 cut(s) 652
XceI RCATGY 1 cut(s) 313
XcmI CCANNNNNNNNNTGG 1 cut(s) 348
XmiI GTMKAC 2 cut(s) 943, 996
XspI CTAG 1 cut(s) 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.