RchiOBHm_Chr7g0206621

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
24248845 .. 24254776
5932 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18492

Sequence Viewer

Length: 2466 bp
ATGATAGCTAATTTGAATAGCTGCAATTTGAAAAAACAAAAACTCGATGTCATTATTGAGCAGAAAGATTGCTGCAAGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTCATCACTCTTGATCTCTCTTATAGTTATTACCATTCCATTAAACGGAGAGGTGAAATTAGTCCTTCACTACTTGAATTGCGATATCTAAATTACTTGGACCTCAGTTATAATGATTTTGGAGGAATGATCATTCCCAAGTTCATTGGCTCTCTGAGTCAACTGAAAGAACTCAAACTTGCAGATGCTAATTTCAGTGGACCTATTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTACCATAACCAAGTTGTTAGTCCTGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCATATCTAGATTTGTCAAAGGTTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTCGCTGACCGAGCTTCAGTTATCTTGGTGTGAGCTTCCTGATGTCAATCTAAGATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAACTCCTTGACCTCTCTGGGAACTCTCTTAATTCTTCAATATTTTATTGGATAGCCAATGTCAGCAGCAACTTTGTCCATATTGATCTGTCTTGGAATAAACTTGAAGGTGGGATACCAAAAGGCATTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTATGGTCAAACCAATTGTCTGAAAACTTTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGAGACCGTGGACTTGGGTTTTAACCAATTTTGGGGATCATTGCCAGATTTGAAACGTTTTTTAAAGTTAAGAAAGTTATATCTTTCAAATAATCAACTAAATGGGTCTGTACCCAAGAGTGTCGGGCAACTCTCTAGCCTTGAAAGCTTGTATCTCAGAGGGAATTCTTTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTACAGTATTTGAGTCTTTCTGGTAATCGTTTCTCTATCAACCTGAGCTCTGATTGGAATCCACCATTTCAGCTTTTGAGGTTAGATATGTCCTCTTGCAAGATGGGACCAGCTTTTCCCAAGTGGATTCTAACGCAGACAGATCTTACTGATCTTTATCTCTCTAATGCTGGACTATCAGGAAAACTGCCGAATCTATCATCAACAAGCTTGTTTACTCTCAACTTGTCTTCTAATCTATTTTCTGGCGCATTGCCATCATTTTCTCCTATGCTACAAAGGCTGTATCTCTCGAATAATAGGTTTTCAGGACATTTGTCTTCCTTATGTGCAACGCAGTCTCCATATTGGATGTATCTTGACATTTCTAAGAACCTATTGTCTGGGGAGGCTCCTAATTGTTGGATGCAATTTCAAAGTTTGTATCTATTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTCGTTAGGCAGTCTACAGGGAATTGGGATATTGCGGTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCGGATTATTGATGGTTGACCTTGGCAACAATAACTTGTCTGGAAAGATACCAACATGGATTGACCAAAGCCTAAAAAACTTGGTGATTCTACGCTTACGGTCCAATGAGTTCAATGGAATCATACCCTTCTCCCTGTGCAGTCTAGCTGCCATTCATGTTTTGGACCTCTCTCACAACAGTATTTCAGGAGGCTTGCCACATTGCTTCAATAACATAACCTCGTTGCCTACTAATACTGGAGTTGGTGAAAATGTGGAACTTGTGTGGAAAGGAATAGAAAGAGAGTTTCCCAATCTTATAGGTATGAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGGAAATTCCGCCAAGTATAGCAAGTATGACAGAGTTGAAATCTCTGAACCTGTCTAGAAACAAATTGACGGGAAAGCTTCCTGAAGACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCGGATATCTGGTAAAATTCCTTCAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCACACAATAACTTGTCAGGAAGAATTCCATCAGGCACCCAACTTCAGGGTTTTAATGCTTCTCAATATATGGGAAATCGTGGACTTTGTGGACCACCGCTGACACAAAGTTGTCCAGGAGAAGGAACTGAAATTGATAACAAAGAACATGATAATGATGGTCTCATAAGCCTGGGATTTTTTATCAGTGTTGTGCTGGGATTCGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGACTGGATTTATGTCAAAACCGTTGTGTACAAGGCAAAACTGCAAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

821

Amino Acids

91.42

Weight (kDa)

8.03

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 57 - 259 1.6e-12 Leucine-rich repeat region
LRR_8 PF13855 272 - 329 3e-06 Leucine rich repeat
LRR_8 PF13855 294 - 354 4.8e-09 Leucine rich repeat
LRR_8 PF13855 631 - 689 5e-11 Leucine rich repeat
LRR_14 PF23598 649 - 712 1.8e-06 Leucine-rich repeat region
LRR_8 PF13855 673 - 713 5.3e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 225
AasI GACNNNNNNGTC 1 cut(s) 748
AccB1I GGYRCC 1 cut(s) 2159
AccI GTMKAC 1 cut(s) 1513
AciI CCGC 4 cut(s) 1534, 1937, 2222, 2352
AclI AACGTT 1 cut(s) 871
AclWI GGATC 1 cut(s) 859
AcoI YGGCCR 1 cut(s) 473
AcsI RAATTY 5 cut(s) 979, 1462, 1932, 2076, 2148
AcuI CTGAAG 3 cut(s) 497, 2031, 2153
AfaI GTAC 3 cut(s) 927, 1585, 2444
AfiI CCNNNNNNNGG 5 cut(s) 159, 332, 847, 2170, 2246
AflII CTTAAG 1 cut(s) 2366
AflIII ACRYGT 1 cut(s) 438
AjnI CCWGG 3 cut(s) 2239, 2295, 2400
Alw21I GWGCWC 1 cut(s) 1079
Alw26I GTCTC 3 cut(s) 812, 1374, 2291
AlwI GGATC 1 cut(s) 859
AoxI GGCC 1 cut(s) 473
ApeKI GCWGC 5 cut(s) 21, 72, 651, 726, 1733
ApoI RAATTY 5 cut(s) 979, 1462, 1932, 2076, 2148
ArsI GACNNNNNNTTYG 2 cut(s) 746, 778
AseI ATTAAT 1 cut(s) 567
AspLEI GCGC 1 cut(s) 1280
AspS9I GGNCC 6 cut(s) 214, 314, 1136, 1686, 1750, 2216
AsuHPI GGTGA 3 cut(s) 179, 1681, 1844
AvaII GGWCC 6 cut(s) 214, 314, 1136, 1686, 1750, 2216
BalI TGGCCA 1 cut(s) 475
BanI GGYRCC 1 cut(s) 2159
BanII GRGCYC 1 cut(s) 1079
BarI GAAGNNNNNNTAC 4 cut(s) 684, 716, 2065, 2097
BbsI GAAGAC 3 cut(s) 1251, 1341, 2019
Bbv12I GWGCWC 1 cut(s) 1079
BbvI GCAGC 5 cut(s) 8, 59, 663, 738, 1720
BccI CCATC 6 cut(s) 1126, 1294, 1591, 2161, 2276, 2338
BciT130I CCWGG 3 cut(s) 2241, 2297, 2402
BciVI GTATCC 1 cut(s) 693
BclI TGATCA 1 cut(s) 243
BcoDI GTCTC 3 cut(s) 812, 1374, 2291
BfaI CTAG 4 cut(s) 449, 951, 1730, 1983
BfmI CTRYAG 1 cut(s) 1514
BfrI CTTAAG 1 cut(s) 2366
BfuI GTATCC 1 cut(s) 693
BglII AGATCT 1 cut(s) 1171
BisI GCNGC 6 cut(s) 22, 73, 652, 727, 1734, 2353
BlsI GCNGC 6 cut(s) 23, 74, 653, 728, 1735, 2354
Bme1390I CCNGG 3 cut(s) 2241, 2297, 2402
Bme18I GGWCC 6 cut(s) 214, 314, 1136, 1686, 1750, 2216
BmgT120I GGNCC 6 cut(s) 214, 314, 1136, 1686, 1750, 2216
BmiI GGNNCC 3 cut(s) 1137, 1422, 2161
BmrFI CCNGG 3 cut(s) 2241, 2297, 2402
BmsI GCATC 2 cut(s) 289, 1425
BoxI GACNNNNGTC 1 cut(s) 1345
BpiI GAAGAC 3 cut(s) 1251, 1341, 2019
BpmI CTGGAG 1 cut(s) 1845
Bpu10I CCTNAGC 1 cut(s) 1073
BpuEI CTTGAG 3 cut(s) 419, 445, 836
BsaBI GATNNNNATC 3 cut(s) 543, 1086, 1185
BsaI GGTCTC 2 cut(s) 812, 2291
BsaJI CCNNGG 3 cut(s) 822, 1606, 2296
BsaWI WCCGGW 2 cut(s) 1586, 2061
BsaXI ACNNNNNCTCC 2 cut(s) 1354, 1384
Bsc4I CCNNNNNNNGG 5 cut(s) 159, 332, 847, 2170, 2246
Bse1I ACTGG 3 cut(s) 1828, 2338, 2423
Bse3DI GCAATG 3 cut(s) 854, 1280, 1786
Bse8I GATNNNNATC 3 cut(s) 543, 1086, 1185
BseBI CCWGG 3 cut(s) 2241, 2297, 2402
BseDI CCNNGG 3 cut(s) 822, 1606, 2296
BseGI GGATG 3 cut(s) 1386, 1440, 2349
BseJI GATNNNNATC 3 cut(s) 543, 1086, 1185
BseLI CCNNNNNNNGG 5 cut(s) 159, 332, 847, 2170, 2246
BseMI GCAATG 3 cut(s) 854, 1280, 1786
BseMII CTCAG 5 cut(s) 232, 260, 795, 985, 1064
BseNI ACTGG 3 cut(s) 1828, 2338, 2423
BseXI GCAGC 5 cut(s) 8, 59, 663, 738, 1720
BseYI CCCAGC 1 cut(s) 2320
BsgI GTGCAG 1 cut(s) 1744
BshFI GGCC 1 cut(s) 475
BshNI GGYRCC 1 cut(s) 2159
BsiHKAI GWGCWC 1 cut(s) 1079
BsiSI CCGG 2 cut(s) 1587, 2062
BslFI GGGAC 1 cut(s) 1149
BslI CCNNNNNNNGG 5 cut(s) 159, 332, 847, 2170, 2246
BsmAI GTCTC 3 cut(s) 812, 1374, 2291
BsmFI GGGAC 1 cut(s) 1149
BsmI GAATGC 1 cut(s) 711
BsnI GGCC 1 cut(s) 475
Bso31I GGTCTC 2 cut(s) 812, 2291
Bsp1286I GDGCHC 1 cut(s) 1079
Bsp1407I TGTACA 1 cut(s) 2442
Bsp143I GATC 8 cut(s) 127, 243, 361, 551, 670, 851, 1171, 1180
BspACI CCGC 4 cut(s) 1534, 1937, 2222, 2352
BspANI GGCC 1 cut(s) 475
BspCNI CTCAG 5 cut(s) 231, 261, 796, 984, 1065
BspLI GGNNCC 3 cut(s) 1137, 1422, 2161
BspPI GGATC 1 cut(s) 859
BspT107I GGYRCC 1 cut(s) 2159
BspTI CTTAAG 1 cut(s) 2366
BspTNI GGTCTC 2 cut(s) 812, 2291
BsrDI GCAATG 3 cut(s) 854, 1280, 1786
BsrGI TGTACA 1 cut(s) 2442
BsrI ACTGG 3 cut(s) 1828, 2338, 2423
BssECI CCNNGG 3 cut(s) 822, 1606, 2296
BssMI GATC 8 cut(s) 127, 243, 361, 551, 670, 851, 1171, 1180
BssT1I CCWWGG 1 cut(s) 1606
Bst2UI CCWGG 3 cut(s) 2241, 2297, 2402
Bst4CI ACNGT 6 cut(s) 823, 1035, 1583, 1686, 1766, 2437
Bst6I CTCTTC 1 cut(s) 588
BstAFI CTTAAG 1 cut(s) 2366
BstAUI TGTACA 1 cut(s) 2442
BstC8I GCNNGC 4 cut(s) 94, 491, 1781, 2095
BstDEI CTNAG 9 cut(s) 218, 269, 548, 730, 804, 971, 1073, 1398, 2108
BstDSI CCRYGG 1 cut(s) 822
BstF5I GGATG 3 cut(s) 1386, 1440, 2349
BstHHI GCGC 1 cut(s) 1280
BstKTI GATC 8 cut(s) 130, 246, 364, 554, 673, 854, 1174, 1183
BstMAI GTCTC 3 cut(s) 812, 1374, 2291
BstMBI GATC 8 cut(s) 127, 243, 361, 551, 670, 851, 1171, 1180
BstMWI GCNNNNNNNGC 5 cut(s) 499, 508, 960, 1309, 1506
BstNI CCWGG 3 cut(s) 2241, 2297, 2402
BstNSI RCATGY 2 cut(s) 96, 442
BstPAI GACNNNNGTC 1 cut(s) 1345
BstSCI CCNGG 3 cut(s) 2239, 2295, 2400
BstSFI CTRYAG 1 cut(s) 1514
BstV1I GCAGC 5 cut(s) 8, 59, 663, 738, 1720
BstV2I GAAGAC 3 cut(s) 1251, 1341, 2019
BstX2I RGATCY 1 cut(s) 1171
BstYI RGATCY 1 cut(s) 1171
BsuI GTATCC 1 cut(s) 693
BsuRI GGCC 1 cut(s) 475
BtgI CCRYGG 1 cut(s) 822
BtsCI GGATG 3 cut(s) 1386, 1440, 2349
BtsIMutI CAGTG 3 cut(s) 316, 2317, 2331
Cac8I GCNNGC 4 cut(s) 94, 491, 1781, 2095
CfoI GCGC 1 cut(s) 1280
Cfr13I GGNCC 6 cut(s) 214, 314, 1136, 1686, 1750, 2216
Csp6I GTAC 3 cut(s) 926, 1584, 2443
CviAII CATG 8 cut(s) 93, 113, 439, 1541, 1641, 1742, 2026, 2273
CviQI GTAC 3 cut(s) 926, 1584, 2443
DdeI CTNAG 9 cut(s) 218, 269, 548, 730, 804, 971, 1073, 1398, 2108
DpnI GATC 8 cut(s) 129, 245, 363, 553, 672, 853, 1173, 1182
DpnII GATC 8 cut(s) 127, 243, 361, 551, 670, 851, 1171, 1180
DraI TTTAAA 1 cut(s) 879
DrdI GACNNNNNNGTC 1 cut(s) 748
DseDI GACNNNNNNGTC 1 cut(s) 748
EaeI YGGCCR 1 cut(s) 473
Eam1104I CTCTTC 1 cut(s) 588
EarI CTCTTC 1 cut(s) 588
EciI GGCGGA 1 cut(s) 1926
Ecl136II GAGCTC 1 cut(s) 1077
Eco130I CCWWGG 1 cut(s) 1606
Eco24I GRGCYC 1 cut(s) 1079
Eco31I GGTCTC 2 cut(s) 812, 2291
Eco32I GATATC 2 cut(s) 200, 2067
Eco47I GGWCC 6 cut(s) 214, 314, 1136, 1686, 1750, 2216
Eco53kI GAGCTC 1 cut(s) 1077
Eco57I CTGAAG 3 cut(s) 497, 2031, 2153
EcoICRI GAGCTC 1 cut(s) 1077
EcoRI GAATTC 2 cut(s) 979, 2148
EcoRII CCWGG 3 cut(s) 2239, 2295, 2400
EcoRV GATATC 2 cut(s) 200, 2067
EcoT14I CCWWGG 1 cut(s) 1606
EcoT38I GRGCYC 1 cut(s) 1079
ErhI CCWWGG 1 cut(s) 1606
FaeI CATG 8 cut(s) 96, 116, 442, 1544, 1644, 1745, 2029, 2276
FaqI GGGAC 1 cut(s) 1149
FatI CATG 8 cut(s) 92, 112, 438, 1540, 1640, 1741, 2025, 2272
FbaI TGATCA 1 cut(s) 243
FblI GTMKAC 1 cut(s) 1513
Fnu4HI GCNGC 6 cut(s) 22, 73, 652, 727, 1734, 2353
FokI GGATG 3 cut(s) 1393, 1447, 2356
FriOI GRGCYC 1 cut(s) 1079
Fsp4HI GCNGC 6 cut(s) 22, 73, 652, 727, 1734, 2353
FspBI CTAG 4 cut(s) 449, 951, 1730, 1983
GlaI GCGC 1 cut(s) 1279
GluI GCNGC 6 cut(s) 22, 73, 652, 727, 1734, 2353
GsaI CCCAGC 1 cut(s) 2324
GsuI CTGGAG 1 cut(s) 1845
HaeIII GGCC 1 cut(s) 475
HapII CCGG 2 cut(s) 1587, 2062
HhaI GCGC 1 cut(s) 1280
Hin1II CATG 8 cut(s) 96, 116, 442, 1544, 1644, 1745, 2029, 2276
Hin6I GCGC 1 cut(s) 1278
HinP1I GCGC 1 cut(s) 1278
HincII GTYRAC 3 cut(s) 275, 741, 1603
HindII GTYRAC 3 cut(s) 275, 741, 1603
HindIII AAGCTT 3 cut(s) 961, 1237, 2003
HpaII CCGG 2 cut(s) 1587, 2062
HphI GGTGA 3 cut(s) 179, 1681, 1844
Hpy188I TCNGA 6 cut(s) 270, 766, 974, 1081, 1974, 2396
HpyAV CCTTC 6 cut(s) 189, 686, 1578, 1723, 2091, 2240
HpyCH4III ACNGT 6 cut(s) 823, 1035, 1583, 1686, 1766, 2437
HpyCH4IV ACGT 1 cut(s) 871
HpyF10VI GCNNNNNNNGC 5 cut(s) 499, 508, 960, 1309, 1506
HpyF3I CTNAG 9 cut(s) 218, 269, 548, 730, 804, 971, 1073, 1398, 2108
HpySE526I ACGT 1 cut(s) 871
Hsp92II CATG 8 cut(s) 96, 116, 442, 1544, 1644, 1745, 2029, 2276
HspAI GCGC 1 cut(s) 1278
Ksp22I TGATCA 1 cut(s) 243
Kzo9I GATC 8 cut(s) 127, 243, 361, 551, 670, 851, 1171, 1180
LmnI GCTCC 1 cut(s) 1426
Lsp1109I GCAGC 5 cut(s) 8, 59, 663, 738, 1720
LweI GCATC 2 cut(s) 289, 1425
MaeI CTAG 4 cut(s) 449, 951, 1730, 1983
MaeII ACGT 1 cut(s) 871
MaeIII GTNAC 3 cut(s) 1536, 2021, 2329
MalI GATC 8 cut(s) 129, 245, 363, 553, 672, 853, 1173, 1182
MboI GATC 8 cut(s) 127, 243, 361, 551, 670, 851, 1171, 1180
MboII GAAGA 9 cut(s) 411, 564, 575, 612, 1251, 1341, 2024, 2041, 2157
MfeI CAATTG 1 cut(s) 758
MflI RGATCY 1 cut(s) 1171
MhlI GDGCHC 1 cut(s) 1079
MlsI TGGCCA 1 cut(s) 475
MluNI TGGCCA 1 cut(s) 475
MlyI GAGTC 4 cut(s) 280, 743, 773, 1051
MmeI TCCRAC 2 cut(s) 1412, 2016
Mox20I TGGCCA 1 cut(s) 475
MscI TGGCCA 1 cut(s) 475
MslI CAYNNNNRTG 2 cut(s) 2030, 2277
Msp20I TGGCCA 1 cut(s) 475
MspA1I CMGCKG 1 cut(s) 2224
MspCI CTTAAG 1 cut(s) 2366
MspI CCGG 2 cut(s) 1587, 2062
MspR9I CCNGG 3 cut(s) 2241, 2297, 2402
MunI CAATTG 1 cut(s) 758
Mva1269I GAATGC 1 cut(s) 711
MvaI CCWGG 3 cut(s) 2241, 2297, 2402
MwoI GCNNNNNNNGC 5 cut(s) 499, 508, 960, 1309, 1506
NdeII GATC 8 cut(s) 127, 243, 361, 551, 670, 851, 1171, 1180
NlaIII CATG 8 cut(s) 96, 116, 442, 1544, 1644, 1745, 2029, 2276
NlaIV GGNNCC 3 cut(s) 1137, 1422, 2161
NmuCI GTSAC 1 cut(s) 2329
NspI RCATGY 2 cut(s) 96, 442
PaeI GCATGC 1 cut(s) 96
PciI ACATGT 1 cut(s) 438
PctI GAATGC 1 cut(s) 711
PfeI GAWTC 8 cut(s) 1087, 1156, 1222, 1672, 1704, 2039, 2325, 2397
PfoI TCCNGGA 2 cut(s) 2239, 2400
PkrI GCNGC 6 cut(s) 23, 74, 653, 728, 1735, 2354
PleI GAGTC 4 cut(s) 279, 742, 773, 1050
PpsI GAGTC 4 cut(s) 279, 742, 773, 1050
PscI ACATGT 1 cut(s) 438
PshAI GACNNNNGTC 1 cut(s) 1345
PshBI ATTAAT 1 cut(s) 567
PsiI TTATAA 1 cut(s) 225
Psp124BI GAGCTC 1 cut(s) 1079
Psp1406I AACGTT 1 cut(s) 871
Psp6I CCWGG 3 cut(s) 2239, 2295, 2400
PspFI CCCAGC 1 cut(s) 2320
PspGI CCWGG 3 cut(s) 2239, 2295, 2400
PspN4I GGNNCC 3 cut(s) 1137, 1422, 2161
PspPI GGNCC 6 cut(s) 214, 314, 1136, 1686, 1750, 2216
PsuI RGATCY 1 cut(s) 1171
RsaI GTAC 3 cut(s) 927, 1585, 2444
RsaNI GTAC 3 cut(s) 926, 1584, 2443
RseI CAYNNNNRTG 2 cut(s) 2030, 2277
SacI GAGCTC 1 cut(s) 1079
SatI GCNGC 6 cut(s) 22, 73, 652, 727, 1734, 2353
Sau3AI GATC 8 cut(s) 127, 243, 361, 551, 670, 851, 1171, 1180
Sau96I GGNCC 6 cut(s) 214, 314, 1136, 1686, 1750, 2216
SchI GAGTC 4 cut(s) 280, 743, 773, 1051
ScrFI CCNGG 3 cut(s) 2241, 2297, 2402
SduI GDGCHC 1 cut(s) 1079
SfaNI GCATC 2 cut(s) 289, 1425
SfcI CTRYAG 1 cut(s) 1514
SinI GGWCC 6 cut(s) 214, 314, 1136, 1686, 1750, 2216
SmiMI CAYNNNNRTG 2 cut(s) 2030, 2277
SmlI CTYRAG 4 cut(s) 398, 424, 815, 2366
SmoI CTYRAG 4 cut(s) 398, 424, 815, 2366
SphI GCATGC 1 cut(s) 96
SsiI CCGC 4 cut(s) 1534, 1937, 2222, 2352
SspI AATATT 1 cut(s) 627
SspMI CTAG 4 cut(s) 449, 951, 1730, 1983
SstI GAGCTC 1 cut(s) 1079
StyD4I CCNGG 3 cut(s) 2239, 2295, 2400
StyI CCWWGG 1 cut(s) 1606
TaaI ACNGT 6 cut(s) 823, 1035, 1583, 1686, 1766, 2437
TaiI ACGT 1 cut(s) 874
TaqI TCGA 2 cut(s) 45, 1322
TaqII GACCGA 1 cut(s) 521
TatI WGTACW 1 cut(s) 2442
TauI GCSGC 1 cut(s) 2355
TfiI GAWTC 8 cut(s) 1087, 1156, 1222, 1672, 1704, 2039, 2325, 2397
TscAI CASTG 3 cut(s) 316, 2317, 2338
TseFI GTSAC 1 cut(s) 2329
TseI GCWGC 5 cut(s) 21, 72, 651, 726, 1733
Tsp45I GTSAC 1 cut(s) 2329
TspDTI ATGAA 3 cut(s) 247, 1730, 2042
TspGWI ACGGA 1 cut(s) 175
TspRI CASTG 3 cut(s) 316, 2317, 2338
Vha464I CTTAAG 1 cut(s) 2366
VpaK11BI GGWCC 6 cut(s) 214, 314, 1136, 1686, 1750, 2216
VspI ATTAAT 1 cut(s) 567
XapI RAATTY 5 cut(s) 979, 1462, 1932, 2076, 2148
XbaI TCTAGA 2 cut(s) 448, 1982
XceI RCATGY 2 cut(s) 96, 442
XcmI CCANNNNNNNNNTGG 1 cut(s) 1744
XmiI GTMKAC 1 cut(s) 1513
XspI CTAG 4 cut(s) 449, 951, 1730, 1983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.