RchiOBHm_Chr7g0207161

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
24580665 .. 24582800
2136 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18539

Sequence Viewer

Length: 1890 bp
ATGTCATGGCTGAATTTGTCTGAGGCTGTGAATTGGCCAGAATCTTTGAGCAAGCTCACTTTACTGAGAGAGCTCGAGTTATCCGAGTGTAACCTTCCTGATGTCAATCCAAGATCACTTGCCTTTATTAATTCTTCCACCTCTCTTCAACTCCTTGACCTCTCTTATAACTCTCTGAATTCTTCAATATTTAATTGGATAGCCAATGTCAGCAGCAACTTTGTCCATATTGATCTCTCTTCCAATCAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCAATTGTCTGAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGAGACCTTGGCCTTGGCAGGGAACCAGTTTTGGGGATCGTTGCCGGATTTCACACGTCCACTTTTTGAACCTCTCTCGTTTACAGACTTTGGATATTTCTGGTAATCGTTTCTCTATCAACCTAAGCTCTGATTGGAATCCACCATTTCAGCTTACTGGTGAGTTAGATATGTCCTCTTGCAAGGTGGGCCCAGCTTTTCCCAAGTGGATTCTAACGCAGACAAATCTTTTTAGGCTTTCTCTCTCTAATGCTGGACTATCAGGATCATTACCTCATAAGTTTTGGGATCTATTTTCTGGCTTAGAGTGGTTAGATCTCTCTATGAACCAAATCCATGGGAAACTACCGAATCTGTCATTGACAAGTTTAAGTATTTGTATCTCGCGCGCGAATAACAGTTTTTCAGGACCTTTGTCTTCCTTCTGTGCTCCAGGTATTTGGTATGTTGACATTTCTAAGAACCTATTGTCTGGGGAGCTTCCTAATTGTTGGATGCAATGTCAAGAATTGCAACTGTTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTGGTTAGGCAATCTACAGTCAATTGGGATATTGCGTTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTCTACCCAATTATTGATGGTTGACCTCGGCAACAATAAATTGTCGGGAAAGATACCAACATGGATTGGCCAAAGCCTACCAAACTTGGTGATTCTACGCTTACGGTCAAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCAGTCTAGCTGCCATTAATGTTTTGGACCTCTCTCACAACAATATTTCAGGAAGCTTGCCGCATTGCTTGAATAACATTACCGCTTTGGCTCATGATACTGGAGGAAGTAGAAGTTTTACTGTGGAACTTGTCATTGACATTTCAAGCAACTATTTGATTGGGGAAATTCCGCCTAGTATAGCAAGTATGACAGAGTTGAAATCTCTGAACTTGTCTGGAAACAAATTGACGGGAAAGCTTCCTGAAGACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCGGATATCTGGTCAAATTCCTACAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTGTCACACAACAACTTGTCAGGAAGAATTCCATCAGGCACCCAACTTCAGGGCTTTAATGCTTCTCAATATATGGGAAATCGTGGACTTTGTGGACCACCGCTGACACAAAGTTGTCCAGGAGAAGGAACAGTTCAAGATGATGGAATCGCGAGAGGAACTGAAATTGATAACAAAGAACAGGTTAGTGATGGTCTCATAAACCTTGGATTCTTTATTAGTGCAGTGCTGGGATTTGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACAGCTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATTTATGTCAAAACTGTTGTGTACAAGGCAAAAGTGCGGAGGACACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

629

Amino Acids

69.55

Weight (kDa)

8.12

Isoelectric Point (pI)

37.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 428 - 483 7.1e-10 Leucine rich repeat
LRR_14 PF23598 442 - 506 2e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 168
AccB1I GGYRCC 1 cut(s) 1541
AccII CGCG 4 cut(s) 751, 753, 755, 1655
AciI CCGC 6 cut(s) 1208, 1230, 1319, 1604, 1764, 1870
AclWI GGATC 3 cut(s) 408, 637, 660
AcoI YGGCCR 2 cut(s) 35, 1072
AcsI RAATTY 6 cut(s) 13, 178, 886, 1314, 1458, 1530
AcuI CTGAAG 2 cut(s) 1413, 1535
AfaI GTAC 1 cut(s) 1856
AfiI CCNNNNNNNGG 4 cut(s) 383, 396, 1552, 1628
AflII CTTAAG 1 cut(s) 1778
AflIII ACRYGT 1 cut(s) 418
AhdI GACNNNNNGTC 1 cut(s) 309
AjiI CACGTC 1 cut(s) 421
AjnI CCWGG 3 cut(s) 796, 1621, 1812
Alw21I GWGCWC 2 cut(s) 75, 796
Alw26I GTCTC 2 cut(s) 361, 1703
AlwI GGATC 3 cut(s) 408, 637, 660
Ama87I CYCGRG 1 cut(s) 74
AoxI GGCC 4 cut(s) 35, 374, 553, 1072
ApaI GGGCCC 1 cut(s) 557
ApeKI GCWGC 3 cut(s) 213, 288, 1157
ApoI RAATTY 6 cut(s) 13, 178, 886, 1314, 1458, 1530
AseI ATTAAT 2 cut(s) 129, 1164
AspLEI GCGC 2 cut(s) 753, 755
AspS9I GGNCC 5 cut(s) 553, 554, 773, 1174, 1598
AsuHPI GGTGA 2 cut(s) 536, 1105
AvaI CYCGRG 1 cut(s) 74
AvaII GGWCC 3 cut(s) 773, 1174, 1598
BaeGI GKGCMC 1 cut(s) 557
BalI TGGCCA 2 cut(s) 37, 1074
BanI GGYRCC 1 cut(s) 1541
BanII GRGCYC 2 cut(s) 75, 557
BarI GAAGNNNNNNTAC 2 cut(s) 246, 278
BbsI GAAGAC 2 cut(s) 774, 1401
Bbv12I GWGCWC 2 cut(s) 75, 796
BbvI GCAGC 3 cut(s) 225, 300, 1144
BccI CCATC 5 cut(s) 1015, 1543, 1640, 1688, 1750
BciT130I CCWGG 3 cut(s) 798, 1623, 1814
BciVI GTATCC 1 cut(s) 255
BcoDI GTCTC 2 cut(s) 361, 1703
BfaI CTAG 2 cut(s) 1154, 1323
BfmI CTRYAG 1 cut(s) 938
BfrI CTTAAG 1 cut(s) 1778
BfuI GTATCC 1 cut(s) 255
BglII AGATCT 1 cut(s) 679
BisI GCNGC 5 cut(s) 214, 289, 1158, 1208, 1765
BlsI GCNGC 5 cut(s) 215, 290, 1159, 1209, 1766
Bme1390I CCNGG 3 cut(s) 798, 1623, 1814
Bme18I GGWCC 3 cut(s) 773, 1174, 1598
BmeRI GACNNNNNGTC 1 cut(s) 309
BmeT110I CYCGRG 1 cut(s) 74
BmgBI CACGTC 1 cut(s) 421
BmgT120I GGNCC 5 cut(s) 553, 554, 773, 1174, 1598
BmiI GGNNCC 3 cut(s) 388, 555, 1543
BmrFI CCNGG 3 cut(s) 798, 1623, 1814
BmsI GCATC 1 cut(s) 849
BoxI GACNNNNGTC 1 cut(s) 778
BpiI GAAGAC 2 cut(s) 774, 1401
BpmI CTGGAG 2 cut(s) 780, 1269
Bpu10I CCTNAGC 1 cut(s) 488
BpuEI CTTGAG 1 cut(s) 385
BsaBI GATNNNNATC 2 cut(s) 105, 501
BsaI GGTCTC 2 cut(s) 361, 1703
BsaJI CCNNGG 5 cut(s) 371, 377, 700, 1030, 1708
BsaWI WCCGGW 1 cut(s) 1443
Bsc4I CCNNNNNNNGG 4 cut(s) 383, 396, 1552, 1628
Bse1I ACTGG 4 cut(s) 390, 526, 1252, 1750
Bse3DI GCAATG 2 cut(s) 869, 1210
Bse8I GATNNNNATC 2 cut(s) 105, 501
BseBI CCWGG 3 cut(s) 798, 1623, 1814
BseDI CCNNGG 5 cut(s) 371, 377, 700, 1030, 1708
BseGI GGATG 2 cut(s) 864, 1761
BseJI GATNNNNATC 2 cut(s) 105, 501
BseLI CCNNNNNNNGG 4 cut(s) 383, 396, 1552, 1628
BseMI GCAATG 2 cut(s) 869, 1210
BseMII CTCAG 3 cut(s) 12, 56, 344
BseNI ACTGG 4 cut(s) 390, 526, 1252, 1750
BsePI GCGCGC 1 cut(s) 751
BseSI GKGCMC 1 cut(s) 557
BseXI GCAGC 3 cut(s) 225, 300, 1144
BseYI CCCAGC 2 cut(s) 556, 1732
BsgI GTGCAG 2 cut(s) 1168, 1746
Bsh1236I CGCG 4 cut(s) 751, 753, 755, 1655
BshFI GGCC 4 cut(s) 37, 376, 555, 1074
BshNI GGYRCC 1 cut(s) 1541
BsiHKAI GWGCWC 2 cut(s) 75, 796
BsiHKCI CYCGRG 1 cut(s) 74
BsiSI CCGG 2 cut(s) 409, 1444
BslI CCNNNNNNNGG 4 cut(s) 383, 396, 1552, 1628
BsmAI GTCTC 2 cut(s) 361, 1703
BsnI GGCC 4 cut(s) 37, 376, 555, 1074
Bso31I GGTCTC 2 cut(s) 361, 1703
BsoBI CYCGRG 1 cut(s) 74
Bsp120I GGGCCC 1 cut(s) 553
Bsp1286I GDGCHC 3 cut(s) 75, 557, 796
Bsp1407I TGTACA 1 cut(s) 1854
Bsp143I GATC 6 cut(s) 113, 232, 400, 629, 652, 679
Bsp19I CCATGG 1 cut(s) 700
Bsp68I TCGCGA 1 cut(s) 1655
BspACI CCGC 6 cut(s) 1208, 1230, 1319, 1604, 1764, 1870
BspANI GGCC 4 cut(s) 37, 376, 555, 1074
BspCNI CTCAG 3 cut(s) 13, 57, 345
BspFNI CGCG 4 cut(s) 751, 753, 755, 1655
BspHI TCATGA 1 cut(s) 1240
BspLI GGNNCC 3 cut(s) 388, 555, 1543
BspPI GGATC 3 cut(s) 408, 637, 660
BspT107I GGYRCC 1 cut(s) 1541
BspTI CTTAAG 1 cut(s) 1778
BspTNI GGTCTC 2 cut(s) 361, 1703
BsrDI GCAATG 2 cut(s) 869, 1210
BsrGI TGTACA 1 cut(s) 1854
BsrI ACTGG 4 cut(s) 390, 526, 1252, 1750
BssECI CCNNGG 5 cut(s) 371, 377, 700, 1030, 1708
BssHII GCGCGC 1 cut(s) 751
BssMI GATC 6 cut(s) 113, 232, 400, 629, 652, 679
BssT1I CCWWGG 4 cut(s) 371, 377, 700, 1708
Bst2UI CCWGG 3 cut(s) 798, 1623, 1814
Bst4CI ACNGT 7 cut(s) 764, 882, 942, 1110, 1270, 1636, 1849
Bst6I CTCTTC 2 cut(s) 150, 244
BstAFI CTTAAG 1 cut(s) 1778
BstAUI TGTACA 1 cut(s) 1854
BstC8I GCNNGC 4 cut(s) 53, 753, 1205, 1477
BstDEI CTNAG 8 cut(s) 21, 65, 292, 353, 488, 667, 822, 1490
BstDSI CCRYGG 1 cut(s) 700
BstF5I GGATG 2 cut(s) 864, 1761
BstFNI CGCG 4 cut(s) 751, 753, 755, 1655
BstHHI GCGC 2 cut(s) 753, 755
BstKTI GATC 6 cut(s) 116, 235, 403, 632, 655, 682
BstMAI GTCTC 2 cut(s) 361, 1703
BstMBI GATC 6 cut(s) 113, 232, 400, 629, 652, 679
BstMWI GCNNNNNNNGC 2 cut(s) 552, 930
BstNI CCWGG 3 cut(s) 798, 1623, 1814
BstPAI GACNNNNGTC 1 cut(s) 778
BstSCI CCNGG 3 cut(s) 796, 1621, 1812
BstSFI CTRYAG 1 cut(s) 938
BstSLI GKGCMC 1 cut(s) 557
BstUI CGCG 4 cut(s) 751, 753, 755, 1655
BstV1I GCAGC 3 cut(s) 225, 300, 1144
BstV2I GAAGAC 2 cut(s) 774, 1401
BstX2I RGATCY 2 cut(s) 652, 679
BstXI CCANNNNNNTGG 2 cut(s) 701, 804
BstYI RGATCY 2 cut(s) 652, 679
BsuI GTATCC 1 cut(s) 255
BsuRI GGCC 4 cut(s) 37, 376, 555, 1074
BtgI CCRYGG 1 cut(s) 700
BtrI CACGTC 1 cut(s) 421
BtsCI GGATG 2 cut(s) 864, 1761
BtsI GCAGTG 1 cut(s) 1734
BtsIMutI CAGTG 2 cut(s) 1734, 1743
BtuMI TCGCGA 1 cut(s) 1655
Cac8I GCNNGC 4 cut(s) 53, 753, 1205, 1477
CciI TCATGA 1 cut(s) 1240
CfoI GCGC 2 cut(s) 753, 755
Cfr13I GGNCC 5 cut(s) 553, 554, 773, 1174, 1598
Csp6I GTAC 1 cut(s) 1855
CviAII CATG 6 cut(s) 6, 701, 965, 1065, 1241, 1408
CviQI GTAC 1 cut(s) 1855
DdeI CTNAG 8 cut(s) 21, 65, 292, 353, 488, 667, 822, 1490
DpnI GATC 6 cut(s) 115, 234, 402, 631, 654, 681
DpnII GATC 6 cut(s) 113, 232, 400, 629, 652, 679
DriI GACNNNNNGTC 1 cut(s) 309
EaeI YGGCCR 2 cut(s) 35, 1072
Eam1104I CTCTTC 2 cut(s) 150, 244
Eam1105I GACNNNNNGTC 1 cut(s) 309
EarI CTCTTC 2 cut(s) 150, 244
EciI GGCGGA 1 cut(s) 1308
Ecl136II GAGCTC 1 cut(s) 73
Eco130I CCWWGG 4 cut(s) 371, 377, 700, 1708
Eco24I GRGCYC 2 cut(s) 75, 557
Eco31I GGTCTC 2 cut(s) 361, 1703
Eco32I GATATC 1 cut(s) 1449
Eco47I GGWCC 3 cut(s) 773, 1174, 1598
Eco53kI GAGCTC 1 cut(s) 73
Eco57I CTGAAG 2 cut(s) 1413, 1535
Eco88I CYCGRG 1 cut(s) 74
EcoICRI GAGCTC 1 cut(s) 73
EcoO109I RGGNCCY 1 cut(s) 773
EcoRI GAATTC 2 cut(s) 178, 1530
EcoRII CCWGG 3 cut(s) 796, 1621, 1812
EcoRV GATATC 1 cut(s) 1449
EcoT14I CCWWGG 4 cut(s) 371, 377, 700, 1708
EcoT38I GRGCYC 2 cut(s) 75, 557
ErhI CCWWGG 4 cut(s) 371, 377, 700, 1708
FaeI CATG 6 cut(s) 9, 704, 968, 1068, 1244, 1411
FatI CATG 6 cut(s) 5, 700, 964, 1064, 1240, 1407
Fnu4HI GCNGC 5 cut(s) 214, 289, 1158, 1208, 1765
FokI GGATG 2 cut(s) 871, 1768
FriOI GRGCYC 2 cut(s) 75, 557
Fsp4HI GCNGC 5 cut(s) 214, 289, 1158, 1208, 1765
FspBI CTAG 2 cut(s) 1154, 1323
GlaI GCGC 2 cut(s) 752, 754
GluI GCNGC 5 cut(s) 214, 289, 1158, 1208, 1765
GsaI CCCAGC 2 cut(s) 560, 1736
GsuI CTGGAG 2 cut(s) 780, 1269
HaeIII GGCC 4 cut(s) 37, 376, 555, 1074
HapII CCGG 2 cut(s) 409, 1444
HhaI GCGC 2 cut(s) 753, 755
Hin1II CATG 6 cut(s) 9, 704, 968, 1068, 1244, 1411
Hin6I GCGC 2 cut(s) 751, 753
HinP1I GCGC 2 cut(s) 751, 753
HincII GTYRAC 3 cut(s) 303, 814, 1027
HindII GTYRAC 3 cut(s) 303, 814, 1027
HindIII AAGCTT 2 cut(s) 1201, 1385
HpaII CCGG 2 cut(s) 409, 1444
HphI GGTGA 2 cut(s) 536, 1105
Hpy188I TCNGA 7 cut(s) 22, 85, 177, 315, 496, 1356, 1808
HpyAV CCTTC 6 cut(s) 104, 248, 796, 1002, 1147, 1622
HpyCH4III ACNGT 7 cut(s) 764, 882, 942, 1110, 1270, 1636, 1849
HpyCH4IV ACGT 1 cut(s) 420
HpyCH4V TGCA 7 cut(s) 288, 546, 862, 877, 1149, 1727, 1823
HpyF10VI GCNNNNNNNGC 2 cut(s) 552, 930
HpyF3I CTNAG 8 cut(s) 21, 65, 292, 353, 488, 667, 822, 1490
HpySE526I ACGT 1 cut(s) 420
Hsp92II CATG 6 cut(s) 9, 704, 968, 1068, 1244, 1411
HspAI GCGC 2 cut(s) 751, 753
Kzo9I GATC 6 cut(s) 113, 232, 400, 629, 652, 679
LmnI GCTCC 2 cut(s) 799, 841
Lsp1109I GCAGC 3 cut(s) 225, 300, 1144
LweI GCATC 1 cut(s) 849
MaeI CTAG 2 cut(s) 1154, 1323
MaeII ACGT 1 cut(s) 420
MaeIII GTNAC 4 cut(s) 89, 1403, 1506, 1741
MalI GATC 6 cut(s) 115, 234, 402, 631, 654, 681
MauBI CGCGCGCG 1 cut(s) 751
MboI GATC 6 cut(s) 113, 232, 400, 629, 652, 679
MboII GAAGA 8 cut(s) 126, 137, 174, 231, 774, 1406, 1423, 1539
MfeI CAATTG 2 cut(s) 307, 945
MflI RGATCY 2 cut(s) 652, 679
MhlI GDGCHC 3 cut(s) 75, 557, 796
MlsI TGGCCA 2 cut(s) 37, 1074
MluNI TGGCCA 2 cut(s) 37, 1074
MlyI GAGTC 2 cut(s) 305, 322
MmeI TCCRAC 2 cut(s) 836, 1398
Mox20I TGGCCA 2 cut(s) 37, 1074
MscI TGGCCA 2 cut(s) 37, 1074
MseI TTAA 9 cut(s) 129, 192, 335, 734, 1122, 1164, 1481, 1560, 1779
MslI CAYNNNNRTG 1 cut(s) 1412
Msp20I TGGCCA 2 cut(s) 37, 1074
MspA1I CMGCKG 1 cut(s) 1606
MspCI CTTAAG 1 cut(s) 1778
MspI CCGG 2 cut(s) 409, 1444
MspR9I CCNGG 3 cut(s) 798, 1623, 1814
MunI CAATTG 2 cut(s) 307, 945
MvaI CCWGG 3 cut(s) 798, 1623, 1814
MvnI CGCG 4 cut(s) 751, 753, 755, 1655
MwoI GCNNNNNNNGC 2 cut(s) 552, 930
NcoI CCATGG 1 cut(s) 700
NdeII GATC 6 cut(s) 113, 232, 400, 629, 652, 679
NlaIII CATG 6 cut(s) 9, 704, 968, 1068, 1244, 1411
NlaIV GGNNCC 3 cut(s) 388, 555, 1543
NmeAIII GCCGAG 1 cut(s) 1011
NmuCI GTSAC 2 cut(s) 1506, 1741
NruI TCGCGA 1 cut(s) 1655
PaeR7I CTCGAG 1 cut(s) 74
PagI TCATGA 1 cut(s) 1240
PauI GCGCGC 1 cut(s) 751
PcsI WCGNNNNNNNCGW 1 cut(s) 81
PfoI TCCNGGA 2 cut(s) 1621, 1812
PkrI GCNGC 5 cut(s) 215, 290, 1159, 1209, 1766
PleI GAGTC 2 cut(s) 304, 322
PpsI GAGTC 2 cut(s) 304, 322
PpuMI RGGWCCY 1 cut(s) 773
PshAI GACNNNNGTC 1 cut(s) 778
PshBI ATTAAT 2 cut(s) 129, 1164
PsiI TTATAA 1 cut(s) 168
Psp124BI GAGCTC 1 cut(s) 75
Psp5II RGGWCCY 1 cut(s) 773
Psp6I CCWGG 3 cut(s) 796, 1621, 1812
PspFI CCCAGC 2 cut(s) 556, 1732
PspGI CCWGG 3 cut(s) 796, 1621, 1812
PspN4I GGNNCC 3 cut(s) 388, 555, 1543
PspOMI GGGCCC 1 cut(s) 553
PspPI GGNCC 5 cut(s) 553, 554, 773, 1174, 1598
PspPPI RGGWCCY 1 cut(s) 773
PspXI VCTCGAGB 1 cut(s) 74
PsuI RGATCY 2 cut(s) 652, 679
PteI GCGCGC 1 cut(s) 751
RruI TCGCGA 1 cut(s) 1655
RsaI GTAC 1 cut(s) 1856
RsaNI GTAC 1 cut(s) 1855
RseI CAYNNNNRTG 1 cut(s) 1412
SacI GAGCTC 1 cut(s) 75
SaqAI TTAA 9 cut(s) 129, 192, 335, 734, 1122, 1164, 1481, 1560, 1779
SatI GCNGC 5 cut(s) 214, 289, 1158, 1208, 1765
Sau3AI GATC 6 cut(s) 113, 232, 400, 629, 652, 679
Sau96I GGNCC 5 cut(s) 553, 554, 773, 1174, 1598
SchI GAGTC 2 cut(s) 305, 322
ScrFI CCNGG 3 cut(s) 798, 1623, 1814
SduI GDGCHC 3 cut(s) 75, 557, 796
SfaNI GCATC 1 cut(s) 849
SfcI CTRYAG 1 cut(s) 938
Sfr274I CTCGAG 1 cut(s) 74
SinI GGWCC 3 cut(s) 773, 1174, 1598
SlaI CTCGAG 1 cut(s) 74
SmiMI CAYNNNNRTG 1 cut(s) 1412
SmlI CTYRAG 3 cut(s) 74, 364, 1778
SmoI CTYRAG 3 cut(s) 74, 364, 1778
SsiI CCGC 6 cut(s) 1208, 1230, 1319, 1604, 1764, 1870
SspI AATATT 2 cut(s) 189, 1192
SspMI CTAG 2 cut(s) 1154, 1323
SstI GAGCTC 1 cut(s) 75
StyD4I CCNGG 3 cut(s) 796, 1621, 1812
StyI CCWWGG 4 cut(s) 371, 377, 700, 1708
TaaI ACNGT 7 cut(s) 764, 882, 942, 1110, 1270, 1636, 1849
TaiI ACGT 1 cut(s) 423
TaqI TCGA 1 cut(s) 75
TatI WGTACW 1 cut(s) 1854
TauI GCSGC 2 cut(s) 1210, 1767
Tru1I TTAA 9 cut(s) 129, 192, 335, 734, 1122, 1164, 1481, 1560, 1779
Tru9I TTAA 9 cut(s) 129, 192, 335, 734, 1122, 1164, 1481, 1560, 1779
TscAI CASTG 2 cut(s) 1734, 1750
TseFI GTSAC 2 cut(s) 1506, 1741
TseI GCWGC 3 cut(s) 213, 288, 1157
Tsp45I GTSAC 2 cut(s) 1506, 1741
TspDTI ATGAA 2 cut(s) 704, 1424
TspRI CASTG 2 cut(s) 1734, 1750
Vha464I CTTAAG 1 cut(s) 1778
VpaK11BI GGWCC 3 cut(s) 773, 1174, 1598
VspI ATTAAT 2 cut(s) 129, 1164
XapI RAATTY 6 cut(s) 13, 178, 886, 1314, 1458, 1530
XcmI CCANNNNNNNNNTGG 1 cut(s) 1168
XhoI CTCGAG 1 cut(s) 74
XspI CTAG 2 cut(s) 1154, 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.