Leucine Rich repeat
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 43 - 81 | 1.3e-11 | Leucine rich repeat N-terminal domain |
| LRR_14 | PF23598 | 110 - 270 | 1.9e-08 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 275 - 331 | 2.5e-07 | Leucine rich repeat |
| LRR_8 | PF13855 | 371 - 431 | 2e-08 | Leucine rich repeat |
| LRR_8 | PF13855 | 739 - 797 | 3.2e-09 | Leucine rich repeat |
| LRR_8 | PF13855 | 763 - 821 | 5.2e-09 | Leucine rich repeat |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 912 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 979 |
| Acc16I | TGCGCA | 1 cut(s) | 2799 |
| Acc36I | ACCTGC | 1 cut(s) | 1608 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2570 |
| AccI | GTMKAC | 1 cut(s) | 1831 |
| AciI | CCGC | 5 cut(s) | 75, 1609, 2043, 2052, 2261 |
| AclI | AACGTT | 1 cut(s) | 1102 |
| AclWI | GGATC | 8 cut(s) | 284, 1476, 1632, 1747, 1760, 2016, 2029, 2076 |
| AcoI | YGGCCR | 3 cut(s) | 63, 632, 1966 |
| AcsI | RAATTY | 9 cut(s) | 1093, 1210, 1765, 1780, 2256, 2400, 2472, 2556, 2750 |
| AcuI | CTGAAG | 4 cut(s) | 330, 656, 765, 2477 |
| AfaI | GTAC | 3 cut(s) | 1669, 1903, 2668 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 323, 491, 1078, 2570 |
| AflIII | ACRYGT | 2 cut(s) | 597, 1350 |
| AjnI | CCWGG | 5 cut(s) | 60, 410, 527, 2563, 2754 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1274, 1306, 2178, 2192, 2210, 2224 |
| Alw26I | GTCTC | 4 cut(s) | 1043, 1158, 2645, 2763 |
| AlwI | GGATC | 8 cut(s) | 284, 1476, 1632, 1747, 1760, 2016, 2029, 2076 |
| Ama87I | CYCGRG | 1 cut(s) | 1046 |
| AoxI | GGCC | 4 cut(s) | 63, 632, 1370, 1966 |
| ApeKI | GCWGC | 3 cut(s) | 216, 957, 2795 |
| ApoI | RAATTY | 9 cut(s) | 1093, 1210, 1765, 1780, 2256, 2400, 2472, 2556, 2750 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 977, 1009 |
| AseI | ATTAAT | 1 cut(s) | 726 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 942 |
| AspLEI | GCGC | 1 cut(s) | 2800 |
| AspS9I | GGNCC | 6 cut(s) | 373, 473, 854, 1370, 1649, 2540 |
| AsuHPI | GGTGA | 3 cut(s) | 253, 338, 1940 |
| AvaI | CYCGRG | 1 cut(s) | 1046 |
| AvaII | GGWCC | 5 cut(s) | 373, 473, 854, 1649, 2540 |
| BalI | TGGCCA | 3 cut(s) | 65, 634, 1968 |
| BamHI | GGATCC | 2 cut(s) | 1752, 2021 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 915, 947 |
| BbsI | GAAGAC | 3 cut(s) | 683, 1560, 1650 |
| BbvCI | CCTCAGC | 1 cut(s) | 1304 |
| BbvI | GCAGC | 3 cut(s) | 203, 969, 2782 |
| BccI | CCATC | 6 cut(s) | 866, 1603, 1909, 2564, 2582, 2630 |
| BciT130I | CCWGG | 5 cut(s) | 62, 412, 529, 2565, 2756 |
| BciVI | GTATCC | 1 cut(s) | 924 |
| BclI | TGATCA | 1 cut(s) | 402 |
| BcoDI | GTCTC | 4 cut(s) | 1043, 1158, 2645, 2763 |
| BfaI | CTAG | 4 cut(s) | 890, 899, 1182, 2048 |
| BfuAI | ACCTGC | 1 cut(s) | 1608 |
| BfuI | GTATCC | 1 cut(s) | 924 |
| BglII | AGATCT | 2 cut(s) | 26, 1126 |
| BisI | GCNGC | 5 cut(s) | 217, 958, 1610, 2052, 2796 |
| BlpI | GCTNAGC | 1 cut(s) | 1613 |
| BlsI | GCNGC | 5 cut(s) | 218, 959, 1611, 2053, 2797 |
| Bme1390I | CCNGG | 5 cut(s) | 62, 412, 529, 2565, 2756 |
| Bme18I | GGWCC | 5 cut(s) | 373, 473, 854, 1649, 2540 |
| BmeT110I | CYCGRG | 1 cut(s) | 1046 |
| BmgT120I | GGNCC | 6 cut(s) | 373, 473, 854, 1370, 1649, 2540 |
| BmiI | GGNNCC | 5 cut(s) | 856, 1371, 1651, 1754, 2023 |
| BmrFI | CCNGG | 5 cut(s) | 62, 412, 529, 2565, 2756 |
| BmrI | ACTGGG | 2 cut(s) | 1422, 2782 |
| BmsI | GCATC | 1 cut(s) | 448 |
| BmuI | ACTGGG | 2 cut(s) | 1422, 2782 |
| BoxI | GACNNNNGTC | 2 cut(s) | 378, 1654 |
| BpiI | GAAGAC | 3 cut(s) | 683, 1560, 1650 |
| BpmI | CTGGAG | 1 cut(s) | 134 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1304 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1613 |
| BpuEI | CTTGAG | 2 cut(s) | 1081, 2565 |
| BsaBI | GATNNNNATC | 3 cut(s) | 294, 702, 1317 |
| BsaI | GGTCTC | 3 cut(s) | 1043, 1158, 2645 |
| BsaJI | CCNNGG | 6 cut(s) | 410, 1516, 1604, 1924, 2431, 2564 |
| BsaWI | WCCGGW | 1 cut(s) | 1159 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 323, 491, 1078, 2570 |
| Bse1I | ACTGG | 6 cut(s) | 151, 1072, 1134, 1225, 1417, 2777 |
| Bse3DI | GCAATG | 3 cut(s) | 66, 1085, 2104 |
| Bse8I | GATNNNNATC | 3 cut(s) | 294, 702, 1317 |
| BseBI | CCWGG | 5 cut(s) | 62, 412, 529, 2565, 2756 |
| BseDI | CCNNGG | 6 cut(s) | 410, 1516, 1604, 1924, 2431, 2564 |
| BseGI | GGATG | 5 cut(s) | 178, 858, 1812, 2575, 2764 |
| BseJI | GATNNNNATC | 3 cut(s) | 294, 702, 1317 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 323, 491, 1078, 2570 |
| BseMI | GCAATG | 3 cut(s) | 66, 1085, 2104 |
| BseMII | CTCAG | 5 cut(s) | 391, 1026, 1197, 1318, 1707 |
| BseNI | ACTGG | 6 cut(s) | 151, 1072, 1134, 1225, 1417, 2777 |
| BseRI | GAGGAG | 1 cut(s) | 2023 |
| BseXI | GCAGC | 3 cut(s) | 203, 969, 2782 |
| BsgI | GTGCAG | 1 cut(s) | 1608 |
| BshFI | GGCC | 4 cut(s) | 65, 634, 1372, 1968 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1046 |
| BsiSI | CCGG | 2 cut(s) | 1160, 1356 |
| BslFI | GGGAC | 1 cut(s) | 840 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 323, 491, 1078, 2570 |
| BsmAI | GTCTC | 4 cut(s) | 1043, 1158, 2645, 2763 |
| BsmFI | GGGAC | 1 cut(s) | 840 |
| BsmI | GAATGC | 1 cut(s) | 34 |
| BsnI | GGCC | 4 cut(s) | 65, 634, 1372, 1968 |
| Bso31I | GGTCTC | 3 cut(s) | 1043, 1158, 2645 |
| BsoBI | CYCGRG | 1 cut(s) | 1046 |
| Bsp1407I | TGTACA | 1 cut(s) | 1667 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1613 |
| Bsp19I | CCATGG | 1 cut(s) | 1516 |
| BspACI | CCGC | 5 cut(s) | 75, 1609, 2043, 2052, 2261 |
| BspANI | GGCC | 4 cut(s) | 65, 634, 1372, 1968 |
| BspCNI | CTCAG | 5 cut(s) | 390, 1027, 1198, 1317, 1708 |
| BspHI | TCATGA | 1 cut(s) | 15 |
| BspLI | GGNNCC | 5 cut(s) | 856, 1371, 1651, 1754, 2023 |
| BspMI | ACCTGC | 1 cut(s) | 1608 |
| BspPI | GGATC | 8 cut(s) | 284, 1476, 1632, 1747, 1760, 2016, 2029, 2076 |
| BspTNI | GGTCTC | 3 cut(s) | 1043, 1158, 2645 |
| BsrDI | GCAATG | 3 cut(s) | 66, 1085, 2104 |
| BsrGI | TGTACA | 1 cut(s) | 1667 |
| BsrI | ACTGG | 6 cut(s) | 151, 1072, 1134, 1225, 1417, 2777 |
| BssECI | CCNNGG | 6 cut(s) | 410, 1516, 1604, 1924, 2431, 2564 |
| BssNAI | GTATAC | 1 cut(s) | 1832 |
| BssT1I | CCWWGG | 3 cut(s) | 1516, 1924, 2431 |
| Bst1107I | GTATAC | 1 cut(s) | 1832 |
| Bst2UI | CCWGG | 5 cut(s) | 62, 412, 529, 2565, 2756 |
| Bst4CI | ACNGT | 7 cut(s) | 981, 989, 1728, 1776, 1901, 2004, 2547 |
| Bst6I | CTCTTC | 2 cut(s) | 747, 766 |
| BstAUI | TGTACA | 1 cut(s) | 1667 |
| BstC8I | GCNNGC | 6 cut(s) | 141, 238, 650, 881, 1374, 2099 |
| BstDSI | CCRYGG | 1 cut(s) | 1516 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 321 |
| BstF5I | GGATG | 5 cut(s) | 178, 858, 1812, 2575, 2764 |
| BstHHI | GCGC | 1 cut(s) | 2800 |
| BstMAI | GTCTC | 4 cut(s) | 1043, 1158, 2645, 2763 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1824, 2519, 2804 |
| BstNI | CCWGG | 5 cut(s) | 62, 412, 529, 2565, 2756 |
| BstNSI | RCATGY | 4 cut(s) | 143, 601, 883, 1354 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 378, 1654 |
| BstSCI | CCNGG | 5 cut(s) | 60, 410, 527, 2563, 2754 |
| BstV1I | GCAGC | 3 cut(s) | 203, 969, 2782 |
| BstV2I | GAAGAC | 3 cut(s) | 683, 1560, 1650 |
| BstX2I | RGATCY | 7 cut(s) | 26, 1126, 1468, 1624, 1752, 2021, 2068 |
| BstYI | RGATCY | 7 cut(s) | 26, 1126, 1468, 1624, 1752, 2021, 2068 |
| BstZ17I | GTATAC | 1 cut(s) | 1832 |
| BsuI | GTATCC | 1 cut(s) | 924 |
| BsuRI | GGCC | 4 cut(s) | 65, 634, 1372, 1968 |
| BtgI | CCRYGG | 1 cut(s) | 1516 |
| BtsCI | GGATG | 5 cut(s) | 178, 858, 1812, 2575, 2764 |
| BtsI | GCAGTG | 1 cut(s) | 2611 |
| BtsIMutI | CAGTG | 5 cut(s) | 475, 659, 2130, 2610, 2611 |
| BveI | ACCTGC | 1 cut(s) | 1608 |
| Cac8I | GCNNGC | 6 cut(s) | 141, 238, 650, 881, 1374, 2099 |
| CciI | TCATGA | 1 cut(s) | 15 |
| CfoI | GCGC | 1 cut(s) | 2800 |
| Cfr13I | GGNCC | 6 cut(s) | 373, 473, 854, 1370, 1649, 2540 |
| Csp6I | GTAC | 3 cut(s) | 1668, 1902, 2667 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 624, 659 |
| CviQI | GTAC | 3 cut(s) | 1668, 1902, 2667 |
| DraI | TTTAAA | 3 cut(s) | 157, 1494, 1857 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 979 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 979 |
| EaeI | YGGCCR | 3 cut(s) | 63, 632, 1966 |
| Eam1104I | CTCTTC | 2 cut(s) | 747, 766 |
| EarI | CTCTTC | 2 cut(s) | 747, 766 |
| Eco130I | CCWWGG | 3 cut(s) | 1516, 1924, 2431 |
| Eco31I | GGTCTC | 3 cut(s) | 1043, 1158, 2645 |
| Eco32I | GATATC | 1 cut(s) | 2391 |
| Eco47I | GGWCC | 5 cut(s) | 373, 473, 854, 1649, 2540 |
| Eco57I | CTGAAG | 4 cut(s) | 330, 656, 765, 2477 |
| Eco88I | CYCGRG | 1 cut(s) | 1046 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 321 |
| EcoO109I | RGGNCCY | 2 cut(s) | 854, 1649 |
| EcoRI | GAATTC | 2 cut(s) | 1210, 2472 |
| EcoRII | CCWGG | 5 cut(s) | 60, 410, 527, 2563, 2754 |
| EcoRV | GATATC | 1 cut(s) | 2391 |
| EcoT14I | CCWWGG | 3 cut(s) | 1516, 1924, 2431 |
| EcoT22I | ATGCAT | 1 cut(s) | 36 |
| ErhI | CCWWGG | 3 cut(s) | 1516, 1924, 2431 |
| FaqI | GGGAC | 1 cut(s) | 840 |
| FbaI | TGATCA | 1 cut(s) | 402 |
| FblI | GTMKAC | 1 cut(s) | 1831 |
| Fnu4HI | GCNGC | 5 cut(s) | 217, 958, 1610, 2052, 2796 |
| FokI | GGATG | 5 cut(s) | 185, 845, 1819, 2582, 2771 |
| Fsp4HI | GCNGC | 5 cut(s) | 217, 958, 1610, 2052, 2796 |
| FspBI | CTAG | 4 cut(s) | 890, 899, 1182, 2048 |
| FspI | TGCGCA | 1 cut(s) | 2799 |
| GlaI | GCGC | 1 cut(s) | 2799 |
| GluI | GCNGC | 5 cut(s) | 217, 958, 1610, 2052, 2796 |
| GsuI | CTGGAG | 1 cut(s) | 134 |
| HaeIII | GGCC | 4 cut(s) | 65, 634, 1372, 1968 |
| HapII | CCGG | 2 cut(s) | 1160, 1356 |
| HhaI | GCGC | 1 cut(s) | 2800 |
| Hin6I | GCGC | 1 cut(s) | 2798 |
| HinP1I | GCGC | 1 cut(s) | 2798 |
| HincII | GTYRAC | 5 cut(s) | 972, 1539, 1561, 1921, 2550 |
| HindII | GTYRAC | 5 cut(s) | 972, 1539, 1561, 1921, 2550 |
| HindIII | AAGCTT | 3 cut(s) | 650, 1546, 2327 |
| HpaI | GTTAAC | 1 cut(s) | 2550 |
| HpaII | CCGG | 2 cut(s) | 1160, 1356 |
| HphI | GGTGA | 3 cut(s) | 253, 338, 1940 |
| Hpy188I | TCNGA | 8 cut(s) | 550, 997, 1207, 1312, 1717, 2298, 2388, 2496 |
| HpyAV | CCTTC | 7 cut(s) | 155, 348, 666, 917, 932, 1698, 1896 |
| HpyCH4III | ACNGT | 7 cut(s) | 981, 989, 1728, 1776, 1901, 2004, 2547 |
| HpyCH4IV | ACGT | 3 cut(s) | 1102, 1996, 2445 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1824, 2519, 2804 |
| HpySE526I | ACGT | 3 cut(s) | 1102, 1996, 2445 |
| HspAI | GCGC | 1 cut(s) | 2798 |
| Ksp22I | TGATCA | 1 cut(s) | 402 |
| KspAI | GTTAAC | 1 cut(s) | 2550 |
| LmnI | GCTCC | 2 cut(s) | 107, 1735 |
| Lsp1109I | GCAGC | 3 cut(s) | 203, 969, 2782 |
| LweI | GCATC | 1 cut(s) | 448 |
| MaeI | CTAG | 4 cut(s) | 890, 899, 1182, 2048 |
| MaeII | ACGT | 3 cut(s) | 1102, 1996, 2445 |
| MaeIII | GTNAC | 6 cut(s) | 259, 365, 1928, 2345, 2606, 2683 |
| MfeI | CAATTG | 1 cut(s) | 434 |
| MflI | RGATCY | 7 cut(s) | 26, 1126, 1468, 1624, 1752, 2021, 2068 |
| MlsI | TGGCCA | 3 cut(s) | 65, 634, 1968 |
| MluNI | TGGCCA | 3 cut(s) | 65, 634, 1968 |
| MlyI | GAGTC | 5 cut(s) | 170, 439, 974, 1004, 1282 |
| MmeI | TCCRAC | 4 cut(s) | 76, 1602, 1730, 2340 |
| Mox20I | TGGCCA | 3 cut(s) | 65, 634, 1968 |
| Mph1103I | ATGCAT | 1 cut(s) | 36 |
| MroXI | GAANNNNTTC | 1 cut(s) | 942 |
| MscI | TGGCCA | 3 cut(s) | 65, 634, 1968 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2123, 2354 |
| Msp20I | TGGCCA | 3 cut(s) | 65, 634, 1968 |
| MspI | CCGG | 2 cut(s) | 1160, 1356 |
| MspR9I | CCNGG | 5 cut(s) | 62, 412, 529, 2565, 2756 |
| MssI | GTTTAAAC | 1 cut(s) | 157 |
| MunI | CAATTG | 1 cut(s) | 434 |
| Mva1269I | GAATGC | 1 cut(s) | 34 |
| MvaI | CCWGG | 5 cut(s) | 62, 412, 529, 2565, 2756 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1824, 2519, 2804 |
| NcoI | CCATGG | 1 cut(s) | 1516 |
| NlaIV | GGNNCC | 5 cut(s) | 856, 1371, 1651, 1754, 2023 |
| NmeAIII | GCCGAG | 1 cut(s) | 1585 |
| NmuCI | GTSAC | 4 cut(s) | 259, 1928, 2606, 2683 |
| NsbI | TGCGCA | 1 cut(s) | 2799 |
| NsiI | ATGCAT | 1 cut(s) | 36 |
| NspI | RCATGY | 4 cut(s) | 143, 601, 883, 1354 |
| PaeI | GCATGC | 2 cut(s) | 143, 883 |
| PaeR7I | CTCGAG | 1 cut(s) | 1046 |
| PagI | TCATGA | 1 cut(s) | 15 |
| PciI | ACATGT | 2 cut(s) | 597, 1350 |
| PctI | GAATGC | 1 cut(s) | 34 |
| PdmI | GAANNNNTTC | 1 cut(s) | 942 |
| PfeI | GAWTC | 9 cut(s) | 1235, 1318, 1390, 1507, 1531, 1990, 2363, 2655, 2762 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2570 |
| PfoI | TCCNGGA | 2 cut(s) | 527, 2754 |
| PkrI | GCNGC | 5 cut(s) | 218, 959, 1611, 2053, 2797 |
| PleI | GAGTC | 5 cut(s) | 170, 438, 973, 1004, 1281 |
| PmeI | GTTTAAAC | 1 cut(s) | 157 |
| PpsI | GAGTC | 5 cut(s) | 170, 438, 973, 1004, 1281 |
| PpuMI | RGGWCCY | 2 cut(s) | 854, 1649 |
| PscI | ACATGT | 2 cut(s) | 597, 1350 |
| PshAI | GACNNNNGTC | 2 cut(s) | 378, 1654 |
| PshBI | ATTAAT | 1 cut(s) | 726 |
| PsiI | TTATAA | 1 cut(s) | 912 |
| Psp1406I | AACGTT | 1 cut(s) | 1102 |
| Psp5II | RGGWCCY | 2 cut(s) | 854, 1649 |
| Psp6I | CCWGG | 5 cut(s) | 60, 410, 527, 2563, 2754 |
| PspGI | CCWGG | 5 cut(s) | 60, 410, 527, 2563, 2754 |
| PspN4I | GGNNCC | 5 cut(s) | 856, 1371, 1651, 1754, 2023 |
| PspPI | GGNCC | 6 cut(s) | 373, 473, 854, 1370, 1649, 2540 |
| PspPPI | RGGWCCY | 2 cut(s) | 854, 1649 |
| PsuI | RGATCY | 7 cut(s) | 26, 1126, 1468, 1624, 1752, 2021, 2068 |
| RsaI | GTAC | 3 cut(s) | 1669, 1903, 2668 |
| RsaNI | GTAC | 3 cut(s) | 1668, 1902, 2667 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2123, 2354 |
| SatI | GCNGC | 5 cut(s) | 217, 958, 1610, 2052, 2796 |
| Sau96I | GGNCC | 6 cut(s) | 373, 473, 854, 1370, 1649, 2540 |
| SchI | GAGTC | 5 cut(s) | 170, 439, 974, 1004, 1282 |
| ScrFI | CCNGG | 5 cut(s) | 62, 412, 529, 2565, 2756 |
| SfaNI | GCATC | 1 cut(s) | 448 |
| Sfr274I | CTCGAG | 1 cut(s) | 1046 |
| SinI | GGWCC | 5 cut(s) | 373, 473, 854, 1649, 2540 |
| SlaI | CTCGAG | 1 cut(s) | 1046 |
| SmiI | ATTTAAAT | 1 cut(s) | 1494 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2123, 2354 |
| SmlI | CTYRAG | 3 cut(s) | 1046, 1060, 2580 |
| SmoI | CTYRAG | 3 cut(s) | 1046, 1060, 2580 |
| SphI | GCATGC | 2 cut(s) | 143, 883 |
| SsiI | CCGC | 5 cut(s) | 75, 1609, 2043, 2052, 2261 |
| SspI | AATATT | 2 cut(s) | 826, 2086 |
| SspMI | CTAG | 4 cut(s) | 890, 899, 1182, 2048 |
| StyD4I | CCNGG | 5 cut(s) | 60, 410, 527, 2563, 2754 |
| StyI | CCWWGG | 3 cut(s) | 1516, 1924, 2431 |
| SwaI | ATTTAAAT | 1 cut(s) | 1494 |
| TaaI | ACNGT | 7 cut(s) | 981, 989, 1728, 1776, 1901, 2004, 2547 |
| TaiI | ACGT | 3 cut(s) | 1105, 1999, 2448 |
| TaqI | TCGA | 5 cut(s) | 1047, 1631, 1707, 1861, 2234 |
| TatI | WGTACW | 2 cut(s) | 1667, 2666 |
| TauI | GCSGC | 2 cut(s) | 1612, 2054 |
| TfiI | GAWTC | 9 cut(s) | 1235, 1318, 1390, 1507, 1531, 1990, 2363, 2655, 2762 |
| TscAI | CASTG | 5 cut(s) | 475, 666, 2130, 2611, 2617 |
| TseFI | GTSAC | 4 cut(s) | 259, 1928, 2606, 2683 |
| TseI | GCWGC | 3 cut(s) | 216, 957, 2795 |
| Tsp45I | GTSAC | 4 cut(s) | 259, 1928, 2606, 2683 |
| TspDTI | ATGAA | 7 cut(s) | 221, 406, 779, 1520, 1544, 2048, 2366 |
| TspRI | CASTG | 5 cut(s) | 475, 666, 2130, 2611, 2617 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2570 |
| VpaK11BI | GGWCC | 5 cut(s) | 373, 473, 854, 1649, 2540 |
| VspI | ATTAAT | 1 cut(s) | 726 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 321 |
| XapI | RAATTY | 9 cut(s) | 1093, 1210, 1765, 1780, 2256, 2400, 2472, 2556, 2750 |
| XceI | RCATGY | 4 cut(s) | 143, 601, 883, 1354 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1912, 2062 |
| XhoI | CTCGAG | 1 cut(s) | 1046 |
| XmiI | GTMKAC | 1 cut(s) | 1831 |
| XmnI | GAANNNNTTC | 1 cut(s) | 942 |
| XspI | CTAG | 4 cut(s) | 890, 899, 1182, 2048 |
| Zsp2I | ATGCAT | 1 cut(s) | 36 |