RchiOBHm_Chr7g0207581

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
24867264 .. 24870070
2807 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18575

Sequence Viewer

Length: 2766 bp
ATGATCATGATCATGTTGTTCAGTATGATTAGTGGTAGGTGTATACATTCTGTTTTGGTTGGGCTTCTATGTCTGGTCATTGCTTCTGCTATTTGTTGTTCAAGTGTTGGAAGCTCCAGCATACTGTGCATGGAGAATGAAAGACATGCTCTTCTTCAGTTTAAGCAGAGCATTGTGGACGAGTCTAACGTTCTTGCCTCTTGGGGAAGCAAGAAAGACTGTTGCACGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTCATGACTCTAAATCTCTCTTATAATTCTTCTGATGATTACATTAGTGCTGAAGCTCCATTAAGAGGTGAAATTGATCCTTCACTACTTGAATTACGAAATCTAAATTACTTGGATCTCAGTTTTAATGATTTTGGAGGAATGATTCCCAAGTTCTTTGGCTCTTTAAGTCAATTGAAAGAACTCAAACTTGCATATGCTAATTTTGATGGATCTGTTCCTCCCAAAATTGGAAACCTTTCTAATTTGCATACTCTCGATCTTTCCGGGAACTACTTTATTCCTTTAGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATCCTTGAACATGTCAGAAGTAGATTTGTCTAAGATTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTCATTGATGGAGCTTCAGTTATCTGATTGTAGTCTTCCTGATTTTAATATAAGATCAAATTCCGTTGTAAAAAATTCTTCCACCTCTCTTCAAGTCCTTGACCTCTTTTATAACAATCTCAACTCTTCAATATTTTATTGGATAGCCAATGTCAGCAGCAACTTTATCCATATTGGATTGCAAGGAAATCAGTTACAAGGTCCCATCCCAGATGTCTTCAAAAGCATGCTTTCTCTAGCATCACTAGATCTCTCTATCAATCAACTTGAAGGTGGGATACCAAAAAGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTACGGTCAAACCAATTGTCAGAAAACATTGAGAACTCTATTAAAAACTTATCTTGTGCTGAGAACACACTTGAGACCTTGGACTTGATAACCTGTTTTGGGGGTCGTTGCCAGATTTGGCACCTAAATGGGTCTCTACCCGAGAGTGTTGGGCAACTTTCTAGCCTTGAAGTTTTATCTCTCGCCCAGAATTCTCTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAAGCTCTCTCGTTTGCAGTCTCTAGCCATTTCTAATAACCATTTCTCTATCAACCTGAGCTCAGATTGGAATCCACCATTTCAACTTTATTTGTTAGACATGTCCTCTTGCAAGGTGGGCCCAGCTTTTCCCAAATGGATTCTAACGCAGACAAATCTTGCTTTTCTTTATCTGTCTAATGCTGGAATATTTGGATCATTACCTGATAAGTGTTGGGATCTATTTTCTGGCATATTTCGATTAGATCTCTCTATGAACCAAATACATGGGAAACTGCCGAATCTGTCAACAACAAGCTTGGTTTTTGTCAACTTGTCTTCTAATCTACTTTCTGGCACATTGCCATCATTTTCTCCGATGCTCAACGGGTTGTACCTCTCGAATAACATGATTTCAGGACCACTGTCTTCCTTGTGTGCAACACAGATTCCACATTTGGAGTATGTTGACATTTCTGAGAACCTACTGTCAGGAGAGCTTCCTAACTGTTGGATGCAATTTAAATTATTAAGAGTATTGAATTTGGGCATGAATAAATTGACTGGAAAAATACCAAGCATGTTGGGAAATTTAAAGGTAATTAGTATATTAAATTTACATGGTAACAAGTTTTCAGGAGAATTGCCTTCTTTTGAAAATTGTACGGAATTAGCAGTTGTTGACCTTGGGGACAATAACTTTTCCGGCAAGATACCAACATGGATAGGCCAAAGCCTAATAAACTTGGTGATTCTACGCTTACGTGCCAATGAGTTCAATGGAATCATACCCTTAACTCTGTGCAGACTAGCCATCATTCATTTTTTGGACCTCTCTCACAACAATATTTCAGGAGGCTTGCCACATTGCTTGAATAATATATCAGTTTTGGCTGATGATTCTGTCGGAGTTAATGGTTTATCTGTGGAACTTGTGTGGAAAGGAATAGAAATTGAGTTCGGGGAAAATCTTGAGGGTATGAGAGGCATTGACATTTCAAGCAATTATTTGGTTGGAGAAATTCCGGAAAGTATAACGCGTCTGACAAACTTGATTTCTTTGAACCTGTCAAGAAACAATTTGACCGGAAAGCTTCCTGAAAACTTTGGTAACATGCAGAAGTTAGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTCATATTCCTACCAGTTTTTCGAGTTTGCATTTTCTTGGAGTCTTGGACTTATCAAACAACCAGTTGTCCGGAAGAATTCCAGTAAGCACCCAACTTCAGACTTTCAATGCTACTAAATATATGGGAAATCCTGGACTCTGCGGACCACCACTCTCACCAAATTGCCCTGGAGATGAAGCAACTGAAGATGATCATAACAAGGAGCGCGAACACGATAATGATGGTCTCATAAGCTTGGGATTCTTCATCAGTACAGTGTTGGGATTCATCACTGGGTTTTGGATAGTCTGCGGCAGTTTATTGCTTAAGAGTTCTTGGAGATATGCTTATTTCAAATTCCTGGACAATGCAAAAGATTGGATTTATGTCAGAGCTGTTGTCTACAAAGCAAAACTGCAGAGGAGGCTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

921

Amino Acids

101.65

Weight (kDa)

5.6

Isoelectric Point (pI)

34.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 45 - 83 1.1e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 118 - 307 2.9e-09 Leucine-rich repeat region
LRR_8 PF13855 121 - 180 4.7e-07 Leucine rich repeat
LRR_8 PF13855 278 - 333 6.2e-08 Leucine rich repeat
LRR_14 PF23598 289 - 461 1.5e-06 Leucine-rich repeat region
LRR_8 PF13855 725 - 781 2.4e-09 Leucine rich repeat
LRR_8 PF13855 746 - 805 4e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 288, 771
AasI GACNNNNNNGTC 1 cut(s) 985
AccB1I GGYRCC 1 cut(s) 1101
AccI GTMKAC 2 cut(s) 43, 2730
AccII CGCG 2 cut(s) 2227, 2556
AccIII TCCGGA 2 cut(s) 2212, 2417
AciI CCGC 2 cut(s) 2490, 2640
AclI AACGTT 1 cut(s) 189
AclWI GGATC 6 cut(s) 335, 387, 484, 585, 1411, 1434
AcoI YGGCCR 1 cut(s) 635
AcsI RAATTY 9 cut(s) 718, 733, 1171, 1729, 1777, 1801, 2208, 2424, 2684
AcuI CTGAAG 5 cut(s) 140, 336, 659, 2429, 2553
AcvI CACGTG 1 cut(s) 228
AfaI GTAC 3 cut(s) 1583, 1852, 2602
AfiI CCNNNNNNNGG 3 cut(s) 329, 494, 1080
AflII CTTAAG 1 cut(s) 2654
AflIII ACRYGT 3 cut(s) 600, 1308, 2225
AjnI CCWGG 3 cut(s) 2479, 2515, 2688
Alw21I GWGCWC 1 cut(s) 1271
Alw26I GTCTC 4 cut(s) 1049, 1119, 1233, 2579
AlwI GGATC 6 cut(s) 335, 387, 484, 585, 1411, 1434
Ama87I CYCGRG 1 cut(s) 1121
Aor13HI TCCGGA 2 cut(s) 2212, 2417
AoxI GGCC 3 cut(s) 635, 1327, 1915
ApaI GGGCCC 1 cut(s) 1331
ApeKI GCWGC 2 cut(s) 816, 963
ApoI RAATTY 9 cut(s) 718, 733, 1171, 1729, 1777, 1801, 2208, 2424, 2684
ArsI GACNNNNNNTTYG 2 cut(s) 983, 1015
Asp700I GAANNNNTTC 1 cut(s) 502
AspLEI GCGC 1 cut(s) 2556
AspS9I GGNCC 6 cut(s) 860, 1327, 1328, 1607, 2017, 2492
AsuC2I CCSGG 1 cut(s) 532
AsuHPI GGTGA 3 cut(s) 344, 1948, 2496
AvaI CYCGRG 1 cut(s) 1121
AvaII GGWCC 4 cut(s) 860, 1607, 2017, 2492
BaeGI GKGCMC 1 cut(s) 1331
BalI TGGCCA 1 cut(s) 637
BanI GGYRCC 1 cut(s) 1101
BanII GRGCYC 2 cut(s) 1271, 1331
BarI GAAGNNNNNNTAC 2 cut(s) 921, 953
BbrPI CACGTG 1 cut(s) 228
BbsI GAAGAC 4 cut(s) 686, 868, 1518, 1608
Bbv12I GWGCWC 1 cut(s) 1271
BbvI GCAGC 2 cut(s) 828, 975
BccI CCATC 6 cut(s) 467, 661, 872, 1561, 2009, 2564
BciT130I CCWGG 3 cut(s) 2481, 2517, 2690
BciVI GTATCC 1 cut(s) 930
BclI TGATCA 3 cut(s) 3, 9, 2539
BcnI CCSGG 1 cut(s) 532
BcoDI GTCTC 4 cut(s) 1049, 1119, 1233, 2579
BfaI CTAG 5 cut(s) 896, 905, 1143, 1232, 1997
BfmI CTRYAG 1 cut(s) 2744
BfrI CTTAAG 1 cut(s) 2654
BfuI GTATCC 1 cut(s) 930
BglII AGATCT 2 cut(s) 907, 1453
BisI GCNGC 3 cut(s) 817, 964, 2641
BlsI GCNGC 3 cut(s) 818, 965, 2642
Bme1390I CCNGG 4 cut(s) 532, 2481, 2517, 2690
Bme18I GGWCC 4 cut(s) 860, 1607, 2017, 2492
BmeT110I CYCGRG 1 cut(s) 1121
BmgT120I GGNCC 6 cut(s) 860, 1327, 1328, 1607, 2017, 2492
BmiI GGNNCC 3 cut(s) 862, 1103, 1329
BmrFI CCNGG 4 cut(s) 532, 2481, 2517, 2690
BmrI ACTGGG 1 cut(s) 2631
BmsI GCATC 3 cut(s) 908, 1557, 1692
BmuI ACTGGG 1 cut(s) 2631
BoxI GACNNNNGTC 1 cut(s) 1612
BpiI GAAGAC 4 cut(s) 686, 868, 1518, 1608
BpmI CTGGAG 2 cut(s) 100, 2538
Bpu10I CCTNAGC 1 cut(s) 1265
BpuEI CTTGAG 4 cut(s) 581, 607, 1073, 2180
BpuMI CCSGG 1 cut(s) 532
BsaAI YACGTR 2 cut(s) 228, 1952
BsaBI GATNNNNATC 2 cut(s) 8, 1278
BsaI GGTCTC 3 cut(s) 1049, 1119, 2579
BsaJI CCNNGG 3 cut(s) 1059, 1873, 2515
BsaWI WCCGGW 3 cut(s) 2212, 2273, 2417
BsaXI ACNNNNNCTCC 2 cut(s) 662, 692
Bsc4I CCNNNNNNNGG 3 cut(s) 329, 494, 1080
Bse1I ACTGG 5 cut(s) 1756, 2361, 2410, 2429, 2626
Bse3DI GCAATG 3 cut(s) 78, 1547, 2053
Bse8I GATNNNNATC 2 cut(s) 8, 1278
BseAI TCCGGA 2 cut(s) 2212, 2417
BseBI CCWGG 3 cut(s) 2481, 2517, 2690
BseDI CCNNGG 3 cut(s) 1059, 1873, 2515
BseGI GGATG 2 cut(s) 864, 1707
BseJI GATNNNNATC 2 cut(s) 8, 1278
BseLI CCNNNNNNNGG 3 cut(s) 329, 494, 1080
BseMI GCAATG 3 cut(s) 78, 1547, 2053
BseMII CTCAG 6 cut(s) 397, 1032, 1169, 1256, 1284, 1656
BseNI ACTGG 5 cut(s) 1756, 2361, 2410, 2429, 2626
BseRI GAGGAG 1 cut(s) 2764
BseSI GKGCMC 1 cut(s) 1331
BseXI GCAGC 2 cut(s) 828, 975
BseYI CCCAGC 1 cut(s) 1330
BsgI GTGCAG 1 cut(s) 2011
Bsh1236I CGCG 2 cut(s) 2227, 2556
BshFI GGCC 3 cut(s) 637, 1329, 1917
BshNI GGYRCC 1 cut(s) 1101
BsiHKAI GWGCWC 1 cut(s) 1271
BsiHKCI CYCGRG 1 cut(s) 1121
BsiSI CCGG 5 cut(s) 531, 1893, 2213, 2274, 2418
BslFI GGGAC 2 cut(s) 846, 1892
BslI CCNNNNNNNGG 3 cut(s) 329, 494, 1080
BsmAI GTCTC 4 cut(s) 1049, 1119, 1233, 2579
BsmFI GGGAC 2 cut(s) 846, 1892
BsnI GGCC 3 cut(s) 637, 1329, 1917
Bso31I GGTCTC 3 cut(s) 1049, 1119, 2579
BsoBI CYCGRG 1 cut(s) 1121
Bsp120I GGGCCC 1 cut(s) 1327
Bsp1286I GDGCHC 2 cut(s) 1271, 1331
Bsp13I TCCGGA 2 cut(s) 2212, 2417
BspACI CCGC 2 cut(s) 2490, 2640
BspANI GGCC 3 cut(s) 637, 1329, 1917
BspCNI CTCAG 6 cut(s) 396, 1033, 1170, 1257, 1283, 1657
BspEI TCCGGA 2 cut(s) 2212, 2417
BspFNI CGCG 2 cut(s) 2227, 2556
BspHI TCATGA 2 cut(s) 6, 267
BspLI GGNNCC 3 cut(s) 862, 1103, 1329
BspMAI CTGCAG 1 cut(s) 2748
BspPI GGATC 6 cut(s) 335, 387, 484, 585, 1411, 1434
BspQI GCTCTTC 1 cut(s) 156
BspT107I GGYRCC 1 cut(s) 1101
BspTI CTTAAG 1 cut(s) 2654
BspTNI GGTCTC 3 cut(s) 1049, 1119, 2579
BsrDI GCAATG 3 cut(s) 78, 1547, 2053
BsrI ACTGG 5 cut(s) 1756, 2361, 2410, 2429, 2626
BssECI CCNNGG 3 cut(s) 1059, 1873, 2515
BssNAI GTATAC 1 cut(s) 44
BssT1I CCWWGG 2 cut(s) 1059, 1873
Bst1107I GTATAC 1 cut(s) 44
Bst2UI CCWGG 3 cut(s) 2481, 2517, 2690
Bst4CI ACNGT 7 cut(s) 126, 221, 987, 1614, 1677, 1697, 2605
Bst6I CTCTTC 3 cut(s) 156, 753, 790
BstAFI CTTAAG 1 cut(s) 2654
BstAPI GCANNNNNTGC 1 cut(s) 126
BstBAI YACGTR 2 cut(s) 228, 1952
BstC8I GCNNGC 4 cut(s) 244, 653, 887, 2048
BstDEI CTNAG 8 cut(s) 383, 621, 967, 1041, 1178, 1265, 1270, 1665
BstF5I GGATG 2 cut(s) 864, 1707
BstFNI CGCG 2 cut(s) 2227, 2556
BstHHI GCGC 1 cut(s) 2556
BstMAI GTCTC 4 cut(s) 1049, 1119, 1233, 2579
BstMWI GCNNNNNNNGC 3 cut(s) 126, 1326, 2752
BstNI CCWGG 3 cut(s) 2481, 2517, 2690
BstNSI RCATGY 7 cut(s) 149, 246, 604, 889, 1312, 1771, 2305
BstPAI GACNNNNGTC 1 cut(s) 1612
BstSCI CCNGG 4 cut(s) 530, 2479, 2515, 2688
BstSFI CTRYAG 1 cut(s) 2744
BstSLI GKGCMC 1 cut(s) 1331
BstUI CGCG 2 cut(s) 2227, 2556
BstV1I GCAGC 2 cut(s) 828, 975
BstV2I GAAGAC 4 cut(s) 686, 868, 1518, 1608
BstX2I RGATCY 6 cut(s) 379, 476, 590, 907, 1426, 1453
BstXI CCANNNNNNTGG 2 cut(s) 1475, 2345
BstYI RGATCY 6 cut(s) 379, 476, 590, 907, 1426, 1453
BstZ17I GTATAC 1 cut(s) 44
BsuI GTATCC 1 cut(s) 930
BsuRI GGCC 3 cut(s) 637, 1329, 1917
BtsCI GGATG 2 cut(s) 864, 1707
BtsIMutI CAGTG 3 cut(s) 1610, 2610, 2619
Cac8I GCNNGC 4 cut(s) 244, 653, 887, 2048
CciI TCATGA 2 cut(s) 6, 267
CfoI GCGC 1 cut(s) 2556
Cfr13I GGNCC 6 cut(s) 860, 1327, 1328, 1607, 2017, 2492
CseI GACGC 1 cut(s) 2216
Csp6I GTAC 3 cut(s) 1582, 1851, 2601
CspCI CAANNNNNGTGG 2 cut(s) 2040, 2075
CviQI GTAC 3 cut(s) 1582, 1851, 2601
DdeI CTNAG 8 cut(s) 383, 621, 967, 1041, 1178, 1265, 1270, 1665
DraI TTTAAA 2 cut(s) 1711, 1782
DrdI GACNNNNNNGTC 1 cut(s) 985
DseDI GACNNNNNNGTC 1 cut(s) 985
EaeI YGGCCR 1 cut(s) 635
Eam1104I CTCTTC 3 cut(s) 156, 753, 790
EarI CTCTTC 3 cut(s) 156, 753, 790
Ecl136II GAGCTC 1 cut(s) 1269
Eco130I CCWWGG 2 cut(s) 1059, 1873
Eco24I GRGCYC 2 cut(s) 1271, 1331
Eco31I GGTCTC 3 cut(s) 1049, 1119, 2579
Eco32I GATATC 1 cut(s) 2343
Eco47I GGWCC 4 cut(s) 860, 1607, 2017, 2492
Eco53kI GAGCTC 1 cut(s) 1269
Eco57I CTGAAG 5 cut(s) 140, 336, 659, 2429, 2553
Eco72I CACGTG 1 cut(s) 228
Eco88I CYCGRG 1 cut(s) 1121
EcoICRI GAGCTC 1 cut(s) 1269
EcoO109I RGGNCCY 1 cut(s) 860
EcoRI GAATTC 2 cut(s) 1171, 2424
EcoRII CCWGG 3 cut(s) 2479, 2515, 2688
EcoRV GATATC 1 cut(s) 2343
EcoT14I CCWWGG 2 cut(s) 1059, 1873
EcoT38I GRGCYC 2 cut(s) 1271, 1331
ErhI CCWWGG 2 cut(s) 1059, 1873
FaqI GGGAC 2 cut(s) 846, 1892
FauNDI CATATG 1 cut(s) 460
FbaI TGATCA 3 cut(s) 3, 9, 2539
FblI GTMKAC 2 cut(s) 43, 2730
Fnu4HI GCNGC 3 cut(s) 817, 964, 2641
FokI GGATG 2 cut(s) 851, 1714
FriOI GRGCYC 2 cut(s) 1271, 1331
Fsp4HI GCNGC 3 cut(s) 817, 964, 2641
FspBI CTAG 5 cut(s) 896, 905, 1143, 1232, 1997
GlaI GCGC 1 cut(s) 2555
GluI GCNGC 3 cut(s) 817, 964, 2641
GsaI CCCAGC 1 cut(s) 1334
GsuI CTGGAG 2 cut(s) 100, 2538
HaeIII GGCC 3 cut(s) 637, 1329, 1917
HapII CCGG 5 cut(s) 531, 1893, 2213, 2274, 2418
HgaI GACGC 1 cut(s) 2216
HhaI GCGC 1 cut(s) 2556
Hin6I GCGC 1 cut(s) 2554
HinP1I GCGC 1 cut(s) 2554
HincII GTYRAC 5 cut(s) 978, 1497, 1519, 1657, 1870
HindII GTYRAC 5 cut(s) 978, 1497, 1519, 1657, 1870
HindIII AAGCTT 4 cut(s) 946, 1504, 2279, 2581
HpaII CCGG 5 cut(s) 531, 1893, 2213, 2274, 2418
HphI GGTGA 3 cut(s) 344, 1948, 2496
Hpy166II GTNNAC 8 cut(s) 44, 178, 978, 1497, 1519, 1657, 1870, 2731
Hpy8I GTNNAC 8 cut(s) 44, 178, 978, 1497, 1519, 1657, 1870, 2731
HpyAV CCTTC 3 cut(s) 354, 923, 1845
HpyCH4III ACNGT 7 cut(s) 126, 221, 987, 1614, 1677, 1697, 2605
HpyCH4IV ACGT 3 cut(s) 189, 227, 1951
HpyF10VI GCNNNNNNNGC 3 cut(s) 126, 1326, 2752
HpyF3I CTNAG 8 cut(s) 383, 621, 967, 1041, 1178, 1265, 1270, 1665
HpySE526I ACGT 3 cut(s) 189, 227, 1951
HspAI GCGC 1 cut(s) 2554
Kpn2I TCCGGA 2 cut(s) 2212, 2417
Ksp22I TGATCA 3 cut(s) 3, 9, 2539
LguI GCTCTTC 1 cut(s) 156
LmnI GCTCC 4 cut(s) 119, 325, 670, 2551
Lsp1109I GCAGC 2 cut(s) 828, 975
LweI GCATC 3 cut(s) 908, 1557, 1692
MaeI CTAG 5 cut(s) 896, 905, 1143, 1232, 1997
MaeII ACGT 3 cut(s) 189, 227, 1951
MaeIII GTNAC 3 cut(s) 852, 1811, 2297
MfeI CAATTG 2 cut(s) 437, 995
MflI RGATCY 6 cut(s) 379, 476, 590, 907, 1426, 1453
MhlI GDGCHC 2 cut(s) 1271, 1331
MlsI TGGCCA 1 cut(s) 637
MluI ACGCGT 1 cut(s) 2225
MluNI TGGCCA 1 cut(s) 637
MlyI GAGTC 5 cut(s) 191, 265, 980, 2397, 2478
MmeI TCCRAC 4 cut(s) 88, 1679, 2074, 2182
Mox20I TGGCCA 1 cut(s) 637
MroI TCCGGA 2 cut(s) 2212, 2417
MroXI GAANNNNTTC 1 cut(s) 502
MscI TGGCCA 1 cut(s) 637
MslI CAYNNNNRTG 3 cut(s) 11, 1107, 2565
Msp20I TGGCCA 1 cut(s) 637
MspCI CTTAAG 1 cut(s) 2654
MspI CCGG 5 cut(s) 531, 1893, 2213, 2274, 2418
MspR9I CCNGG 4 cut(s) 532, 2481, 2517, 2690
MunI CAATTG 2 cut(s) 437, 995
MvaI CCWGG 3 cut(s) 2481, 2517, 2690
MvnI CGCG 2 cut(s) 2227, 2556
MwoI GCNNNNNNNGC 3 cut(s) 126, 1326, 2752
NciI CCSGG 1 cut(s) 532
NdeI CATATG 1 cut(s) 460
NlaIV GGNNCC 3 cut(s) 862, 1103, 1329
NspI RCATGY 7 cut(s) 149, 246, 604, 889, 1312, 1771, 2305
PaeI GCATGC 2 cut(s) 246, 889
PagI TCATGA 2 cut(s) 6, 267
PciI ACATGT 2 cut(s) 600, 1308
PciSI GCTCTTC 1 cut(s) 156
PcsI WCGNNNNNNNCGW 1 cut(s) 186
PdmI GAANNNNTTC 1 cut(s) 502
PfoI TCCNGGA 3 cut(s) 530, 2479, 2688
PkrI GCNGC 3 cut(s) 818, 965, 2642
PleI GAGTC 5 cut(s) 190, 265, 979, 2396, 2478
PmaCI CACGTG 1 cut(s) 228
PmlI CACGTG 1 cut(s) 228
PpsI GAGTC 5 cut(s) 190, 265, 979, 2396, 2478
Ppu21I YACGTR 2 cut(s) 228, 1952
PpuMI RGGWCCY 1 cut(s) 860
PscI ACATGT 2 cut(s) 600, 1308
PshAI GACNNNNGTC 1 cut(s) 1612
PsiI TTATAA 2 cut(s) 288, 771
Psp124BI GAGCTC 1 cut(s) 1271
Psp1406I AACGTT 1 cut(s) 189
Psp5II RGGWCCY 1 cut(s) 860
Psp6I CCWGG 3 cut(s) 2479, 2515, 2688
PspCI CACGTG 1 cut(s) 228
PspFI CCCAGC 1 cut(s) 1330
PspGI CCWGG 3 cut(s) 2479, 2515, 2688
PspN4I GGNNCC 3 cut(s) 862, 1103, 1329
PspOMI GGGCCC 1 cut(s) 1327
PspPI GGNCC 6 cut(s) 860, 1327, 1328, 1607, 2017, 2492
PspPPI RGGWCCY 1 cut(s) 860
PstI CTGCAG 1 cut(s) 2748
PsuI RGATCY 6 cut(s) 379, 476, 590, 907, 1426, 1453
RsaI GTAC 3 cut(s) 1583, 1852, 2602
RsaNI GTAC 3 cut(s) 1582, 1851, 2601
RseI CAYNNNNRTG 3 cut(s) 11, 1107, 2565
SacI GAGCTC 1 cut(s) 1271
SapI GCTCTTC 1 cut(s) 156
SatI GCNGC 3 cut(s) 817, 964, 2641
Sau96I GGNCC 6 cut(s) 860, 1327, 1328, 1607, 2017, 2492
SchI GAGTC 5 cut(s) 191, 265, 980, 2397, 2478
ScrFI CCNGG 4 cut(s) 532, 2481, 2517, 2690
SduI GDGCHC 2 cut(s) 1271, 1331
SfaNI GCATC 3 cut(s) 908, 1557, 1692
SfcI CTRYAG 1 cut(s) 2744
SinI GGWCC 4 cut(s) 860, 1607, 2017, 2492
SmiI ATTTAAAT 1 cut(s) 1711
SmiMI CAYNNNNRTG 3 cut(s) 11, 1107, 2565
SmlI CTYRAG 5 cut(s) 560, 586, 1052, 2159, 2654
SmoI CTYRAG 5 cut(s) 560, 586, 1052, 2159, 2654
SphI GCATGC 2 cut(s) 246, 889
SsiI CCGC 2 cut(s) 2490, 2640
SspI AATATT 3 cut(s) 792, 1398, 2035
SspMI CTAG 5 cut(s) 896, 905, 1143, 1232, 1997
SstI GAGCTC 1 cut(s) 1271
StyD4I CCNGG 4 cut(s) 530, 2479, 2515, 2688
StyI CCWWGG 2 cut(s) 1059, 1873
SwaI ATTTAAAT 1 cut(s) 1711
TaaI ACNGT 7 cut(s) 126, 221, 987, 1614, 1677, 1697, 2605
TaiI ACGT 3 cut(s) 192, 230, 1954
TaqI TCGA 4 cut(s) 522, 1447, 1589, 2369
TatI WGTACW 1 cut(s) 2600
TauI GCSGC 1 cut(s) 2643
TscAI CASTG 3 cut(s) 1617, 2610, 2626
TseI GCWGC 2 cut(s) 816, 963
TspDTI ATGAA 8 cut(s) 153, 651, 1478, 1754, 1997, 2538, 2584, 2605
TspGWI ACGGA 2 cut(s) 712, 1868
TspRI CASTG 3 cut(s) 1617, 2610, 2626
Vha464I CTTAAG 1 cut(s) 2654
VpaK11BI GGWCC 4 cut(s) 860, 1607, 2017, 2492
XapI RAATTY 9 cut(s) 718, 733, 1171, 1729, 1777, 1801, 2208, 2424, 2684
XceI RCATGY 7 cut(s) 149, 246, 604, 889, 1312, 1771, 2305
XmiI GTMKAC 2 cut(s) 43, 2730
XmnI GAANNNNTTC 1 cut(s) 502
XspI CTAG 5 cut(s) 896, 905, 1143, 1232, 1997
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.