Leucine Rich repeat
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1481 |
| Acc16I | TGCGCA | 2 cut(s) | 497, 644 |
| AccB1I | GGYRCC | 2 cut(s) | 2909, 3029 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2996 |
| AccI | GTMKAC | 1 cut(s) | 3114 |
| AciI | CCGC | 4 cut(s) | 2519, 2541, 2687, 3214 |
| AclWI | GGATC | 4 cut(s) | 1516, 1707, 1879, 1902 |
| AcoI | YGGCCR | 3 cut(s) | 48, 1058, 2383 |
| AcuI | CTGAAG | 3 cut(s) | 315, 1082, 2903 |
| AfaI | GTAC | 3 cut(s) | 1584, 2045, 2320 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 308, 476, 623, 770, 917, 1504, 2996 |
| AflII | CTTAAG | 1 cut(s) | 3131 |
| AflIII | ACRYGT | 6 cut(s) | 607, 901, 1023, 1526, 2064, 2655 |
| AgeI | ACCGGT | 1 cut(s) | 1497 |
| AjnI | CCWGG | 4 cut(s) | 45, 2989, 3060, 3165 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2604, 2636 |
| Alw21I | GWGCWC | 4 cut(s) | 579, 726, 873, 1736 |
| Alw26I | GTCTC | 2 cut(s) | 1040, 3056 |
| AlwI | GGATC | 4 cut(s) | 1516, 1707, 1879, 1902 |
| Ama87I | CYCGRG | 1 cut(s) | 1586 |
| AoxI | GGCC | 5 cut(s) | 48, 1058, 1795, 2338, 2383 |
| ApaI | GGGCCC | 1 cut(s) | 1799 |
| ApeKI | GCWGC | 4 cut(s) | 201, 1236, 1383, 2468 |
| AseI | ATTAAT | 1 cut(s) | 1152 |
| AsiGI | ACCGGT | 1 cut(s) | 1497 |
| AspLEI | GCGC | 2 cut(s) | 498, 645 |
| AspS9I | GGNCC | 9 cut(s) | 358, 458, 752, 1280, 1795, 1796, 2421, 2485, 2966 |
| AsuC2I | CCSGG | 1 cut(s) | 1633 |
| AsuHPI | GGTGA | 1 cut(s) | 323 |
| AvaI | CYCGRG | 1 cut(s) | 1586 |
| AvaII | GGWCC | 7 cut(s) | 358, 458, 752, 1280, 2421, 2485, 2966 |
| BaeGI | GKGCMC | 1 cut(s) | 1799 |
| BalI | TGGCCA | 3 cut(s) | 50, 1060, 2385 |
| BanI | GGYRCC | 2 cut(s) | 2909, 3029 |
| BanII | GRGCYC | 5 cut(s) | 579, 726, 873, 1736, 1799 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1341, 1373 |
| BauI | CACGAG | 2 cut(s) | 2594, 3022 |
| BbsI | GAAGAC | 3 cut(s) | 1288, 1986, 2076 |
| Bbv12I | GWGCWC | 4 cut(s) | 579, 726, 873, 1736 |
| BbvI | GCAGC | 4 cut(s) | 188, 1248, 1395, 2455 |
| BccI | CCATC | 8 cut(s) | 1292, 1760, 2029, 2326, 2990, 3008, 3041, 3103 |
| BceAI | ACGGC | 2 cut(s) | 2062, 3133 |
| BciT130I | CCWGG | 4 cut(s) | 47, 2991, 3062, 3167 |
| BciVI | GTATCC | 1 cut(s) | 1350 |
| BcnI | CCSGG | 1 cut(s) | 1633 |
| BcoDI | GTCTC | 2 cut(s) | 1040, 3056 |
| BfaI | CTAG | 8 cut(s) | 1316, 1325, 1608, 1622, 1707, 2411, 2465, 2733 |
| BfmI | CTRYAG | 1 cut(s) | 2249 |
| BfrI | CTTAAG | 1 cut(s) | 3131 |
| BfuI | GTATCC | 1 cut(s) | 1350 |
| BglII | AGATCT | 3 cut(s) | 1327, 1624, 1921 |
| BisI | GCNGC | 5 cut(s) | 202, 1237, 1384, 2469, 2519 |
| BlsI | GCNGC | 5 cut(s) | 203, 1238, 1385, 2470, 2520 |
| Bme1390I | CCNGG | 5 cut(s) | 47, 1633, 2991, 3062, 3167 |
| Bme18I | GGWCC | 7 cut(s) | 358, 458, 752, 1280, 2421, 2485, 2966 |
| BmeT110I | CYCGRG | 1 cut(s) | 1586 |
| BmgT120I | GGNCC | 9 cut(s) | 358, 458, 752, 1280, 1795, 1796, 2421, 2485, 2966 |
| BmiI | GGNNCC | 5 cut(s) | 1282, 1797, 2106, 2911, 3031 |
| BmrFI | CCNGG | 5 cut(s) | 47, 1633, 2991, 3062, 3167 |
| BmsI | GCATC | 5 cut(s) | 265, 580, 727, 874, 2160 |
| BpiI | GAAGAC | 3 cut(s) | 1288, 1986, 2076 |
| BpmI | CTGGAG | 1 cut(s) | 2091 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1730 |
| BpuEI | CTTGAG | 5 cut(s) | 1004, 1030, 1519, 1772, 1996 |
| BpuMI | CCSGG | 1 cut(s) | 1633 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1128, 1194, 1743 |
| BsaI | GGTCTC | 1 cut(s) | 3056 |
| BsaJI | CCNNGG | 5 cut(s) | 1479, 1942, 2341, 3061, 3201 |
| BsaWI | WCCGGW | 1 cut(s) | 1497 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2089, 2119 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 308, 476, 623, 770, 917, 1504, 2996 |
| Bse118I | RCCGGY | 1 cut(s) | 1497 |
| Bse1I | ACTGG | 3 cut(s) | 133, 249, 3103 |
| Bse3DI | GCAATG | 3 cut(s) | 51, 537, 2521 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1128, 1194, 1743 |
| BseBI | CCWGG | 4 cut(s) | 47, 2991, 3062, 3167 |
| BseDI | CCNNGG | 5 cut(s) | 1479, 1942, 2341, 3061, 3201 |
| BseGI | GGATG | 4 cut(s) | 160, 1284, 2175, 3114 |
| BseJI | GATNNNNATC | 3 cut(s) | 1128, 1194, 1743 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 308, 476, 623, 770, 917, 1504, 2996 |
| BseMI | GCAATG | 3 cut(s) | 51, 537, 2521 |
| BseMII | CTCAG | 7 cut(s) | 376, 1035, 1452, 1721, 1853, 2053, 2064 |
| BseNI | ACTGG | 3 cut(s) | 133, 249, 3103 |
| BseRI | GAGGAG | 1 cut(s) | 203 |
| BseSI | GKGCMC | 1 cut(s) | 1799 |
| BseXI | GCAGC | 4 cut(s) | 188, 1248, 1395, 2455 |
| BseYI | CCCAGC | 3 cut(s) | 1792, 1798, 3085 |
| BsgI | GTGCAG | 3 cut(s) | 2034, 2479, 3099 |
| BshFI | GGCC | 5 cut(s) | 50, 1060, 1797, 2340, 2385 |
| BshNI | GGYRCC | 2 cut(s) | 2909, 3029 |
| BshTI | ACCGGT | 1 cut(s) | 1497 |
| BsiHKAI | GWGCWC | 4 cut(s) | 579, 726, 873, 1736 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1586 |
| BsiSI | CCGG | 2 cut(s) | 1498, 1632 |
| BslFI | GGGAC | 1 cut(s) | 1266 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 308, 476, 623, 770, 917, 1504, 2996 |
| BsmAI | GTCTC | 2 cut(s) | 1040, 3056 |
| BsmFI | GGGAC | 1 cut(s) | 1266 |
| BsmI | GAATGC | 2 cut(s) | 19, 227 |
| BsnI | GGCC | 5 cut(s) | 50, 1060, 1797, 2340, 2385 |
| Bso31I | GGTCTC | 1 cut(s) | 3056 |
| BsoBI | CYCGRG | 1 cut(s) | 1586 |
| Bsp120I | GGGCCC | 1 cut(s) | 1795 |
| Bsp1286I | GDGCHC | 5 cut(s) | 579, 726, 873, 1736, 1799 |
| Bsp19I | CCATGG | 1 cut(s) | 1942 |
| BspACI | CCGC | 4 cut(s) | 2519, 2541, 2687, 3214 |
| BspANI | GGCC | 5 cut(s) | 50, 1060, 1797, 2340, 2385 |
| BspCNI | CTCAG | 7 cut(s) | 375, 1036, 1453, 1722, 1852, 2052, 2065 |
| BspHI | TCATGA | 2 cut(s) | 1120, 2551 |
| BspLI | GGNNCC | 5 cut(s) | 1282, 1797, 2106, 2911, 3031 |
| BspPI | GGATC | 4 cut(s) | 1516, 1707, 1879, 1902 |
| BspT107I | GGYRCC | 2 cut(s) | 2909, 3029 |
| BspTI | CTTAAG | 1 cut(s) | 3131 |
| BspTNI | GGTCTC | 1 cut(s) | 3056 |
| BsrDI | GCAATG | 3 cut(s) | 51, 537, 2521 |
| BsrFI | RCCGGY | 1 cut(s) | 1497 |
| BsrI | ACTGG | 3 cut(s) | 133, 249, 3103 |
| BssAI | RCCGGY | 1 cut(s) | 1497 |
| BssECI | CCNNGG | 5 cut(s) | 1479, 1942, 2341, 3061, 3201 |
| BssSI | CACGAG | 2 cut(s) | 2594, 3022 |
| BssT1I | CCWWGG | 4 cut(s) | 1479, 1942, 2341, 3201 |
| Bst2BI | CACGAG | 2 cut(s) | 2594, 3022 |
| Bst2UI | CCWGG | 4 cut(s) | 47, 2991, 3062, 3167 |
| Bst4CI | ACNGT | 8 cut(s) | 1051, 1752, 2318, 2421, 2669, 2973, 3004, 3040 |
| Bst6I | CTCTTC | 3 cut(s) | 1173, 1267, 1339 |
| BstAFI | CTTAAG | 1 cut(s) | 3131 |
| BstC8I | GCNNGC | 6 cut(s) | 123, 1076, 1307, 2103, 2516, 2845 |
| BstDSI | CCRYGG | 1 cut(s) | 1942 |
| BstF5I | GGATG | 4 cut(s) | 160, 1284, 2175, 3114 |
| BstHHI | GCGC | 2 cut(s) | 498, 645 |
| BstMAI | GTCTC | 2 cut(s) | 1040, 3056 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 2102, 2241 |
| BstNI | CCWGG | 4 cut(s) | 47, 2991, 3062, 3167 |
| BstNSI | RCATGY | 7 cut(s) | 125, 611, 905, 1027, 1309, 2068, 2659 |
| BstSCI | CCNGG | 5 cut(s) | 45, 1631, 2989, 3060, 3165 |
| BstSFI | CTRYAG | 1 cut(s) | 2249 |
| BstSLI | GKGCMC | 1 cut(s) | 1799 |
| BstV1I | GCAGC | 4 cut(s) | 188, 1248, 1395, 2455 |
| BstV2I | GAAGAC | 3 cut(s) | 1288, 1986, 2076 |
| BstX2I | RGATCY | 5 cut(s) | 1327, 1624, 1699, 1894, 1921 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1943, 2147, 2819 |
| BstYI | RGATCY | 5 cut(s) | 1327, 1624, 1699, 1894, 1921 |
| BsuI | GTATCC | 1 cut(s) | 1350 |
| BsuRI | GGCC | 5 cut(s) | 50, 1060, 1797, 2340, 2385 |
| BtgI | CCRYGG | 1 cut(s) | 1942 |
| BtgZI | GCGATG | 1 cut(s) | 1391 |
| BtsCI | GGATG | 4 cut(s) | 160, 1284, 2175, 3114 |
| BtsI | GCAGTG | 2 cut(s) | 2022, 3087 |
| BtsIMutI | CAGTG | 8 cut(s) | 460, 607, 754, 901, 2022, 3082, 3087, 3096 |
| Cac8I | GCNNGC | 6 cut(s) | 123, 1076, 1307, 2103, 2516, 2845 |
| CciI | TCATGA | 2 cut(s) | 1120, 2551 |
| CfoI | GCGC | 2 cut(s) | 498, 645 |
| Cfr10I | RCCGGY | 1 cut(s) | 1497 |
| Cfr13I | GGNCC | 9 cut(s) | 358, 458, 752, 1280, 1795, 1796, 2421, 2485, 2966 |
| Csp6I | GTAC | 3 cut(s) | 1583, 2044, 2319 |
| CspAI | ACCGGT | 1 cut(s) | 1497 |
| CviQI | GTAC | 3 cut(s) | 1583, 2044, 2319 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1481 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1481 |
| EaeI | YGGCCR | 3 cut(s) | 48, 1058, 2383 |
| Eam1104I | CTCTTC | 3 cut(s) | 1173, 1267, 1339 |
| EarI | CTCTTC | 3 cut(s) | 1173, 1267, 1339 |
| Ecl136II | GAGCTC | 4 cut(s) | 577, 724, 871, 1734 |
| Eco130I | CCWWGG | 4 cut(s) | 1479, 1942, 2341, 3201 |
| Eco24I | GRGCYC | 5 cut(s) | 579, 726, 873, 1736, 1799 |
| Eco31I | GGTCTC | 1 cut(s) | 3056 |
| Eco32I | GATATC | 2 cut(s) | 344, 2817 |
| Eco47I | GGWCC | 7 cut(s) | 358, 458, 752, 1280, 2421, 2485, 2966 |
| Eco53kI | GAGCTC | 4 cut(s) | 577, 724, 871, 1734 |
| Eco57I | CTGAAG | 3 cut(s) | 315, 1082, 2903 |
| Eco88I | CYCGRG | 1 cut(s) | 1586 |
| EcoICRI | GAGCTC | 4 cut(s) | 577, 724, 871, 1734 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1280 |
| EcoRI | GAATTC | 2 cut(s) | 1636, 2898 |
| EcoRII | CCWGG | 4 cut(s) | 45, 2989, 3060, 3165 |
| EcoRV | GATATC | 2 cut(s) | 344, 2817 |
| EcoT14I | CCWWGG | 4 cut(s) | 1479, 1942, 2341, 3201 |
| EcoT22I | ATGCAT | 2 cut(s) | 21, 280 |
| EcoT38I | GRGCYC | 5 cut(s) | 579, 726, 873, 1736, 1799 |
| ErhI | CCWWGG | 4 cut(s) | 1479, 1942, 2341, 3201 |
| FaqI | GGGAC | 1 cut(s) | 1266 |
| FauNDI | CATATG | 1 cut(s) | 442 |
| FblI | GTMKAC | 1 cut(s) | 3114 |
| Fnu4HI | GCNGC | 5 cut(s) | 202, 1237, 1384, 2469, 2519 |
| FokI | GGATG | 4 cut(s) | 167, 1271, 2182, 3121 |
| FriOI | GRGCYC | 5 cut(s) | 579, 726, 873, 1736, 1799 |
| Fsp4HI | GCNGC | 5 cut(s) | 202, 1237, 1384, 2469, 2519 |
| FspBI | CTAG | 8 cut(s) | 1316, 1325, 1608, 1622, 1707, 2411, 2465, 2733 |
| FspI | TGCGCA | 2 cut(s) | 497, 644 |
| GlaI | GCGC | 2 cut(s) | 497, 644 |
| GluI | GCNGC | 5 cut(s) | 202, 1237, 1384, 2469, 2519 |
| GsaI | CCCAGC | 3 cut(s) | 1796, 1802, 3089 |
| GsuI | CTGGAG | 1 cut(s) | 2091 |
| HaeIII | GGCC | 5 cut(s) | 50, 1060, 1797, 2340, 2385 |
| HapII | CCGG | 2 cut(s) | 1498, 1632 |
| HhaI | GCGC | 2 cut(s) | 498, 645 |
| Hin6I | GCGC | 2 cut(s) | 496, 643 |
| HinP1I | GCGC | 2 cut(s) | 496, 643 |
| HincII | GTYRAC | 4 cut(s) | 1398, 1987, 2125, 2976 |
| HindII | GTYRAC | 4 cut(s) | 1398, 1987, 2125, 2976 |
| HindIII | AAGCTT | 3 cut(s) | 1972, 2512, 2753 |
| HpaI | GTTAAC | 1 cut(s) | 1987 |
| HpaII | CCGG | 2 cut(s) | 1498, 1632 |
| HphI | GGTGA | 1 cut(s) | 323 |
| HpyAV | CCTTC | 8 cut(s) | 333, 668, 815, 1271, 1343, 2098, 2313, 2458 |
| HpyCH4III | ACNGT | 8 cut(s) | 1051, 1752, 2318, 2421, 2669, 2973, 3004, 3040 |
| HpyCH4IV | ACGT | 1 cut(s) | 1528 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 2102, 2241 |
| HpySE526I | ACGT | 1 cut(s) | 1528 |
| HspAI | GCGC | 2 cut(s) | 496, 643 |
| KspAI | GTTAAC | 1 cut(s) | 1987 |
| LmnI | GCTCC | 3 cut(s) | 92, 2110, 2152 |
| Lsp1109I | GCAGC | 4 cut(s) | 188, 1248, 1395, 2455 |
| LweI | GCATC | 5 cut(s) | 265, 580, 727, 874, 2160 |
| MaeI | CTAG | 8 cut(s) | 1316, 1325, 1608, 1622, 1707, 2411, 2465, 2733 |
| MaeII | ACGT | 1 cut(s) | 1528 |
| MaeIII | GTNAC | 4 cut(s) | 244, 1318, 2771, 3094 |
| MfeI | CAATTG | 6 cut(s) | 419, 566, 713, 860, 1415, 2141 |
| MflI | RGATCY | 5 cut(s) | 1327, 1624, 1699, 1894, 1921 |
| MhlI | GDGCHC | 5 cut(s) | 579, 726, 873, 1736, 1799 |
| MlsI | TGGCCA | 3 cut(s) | 50, 1060, 2385 |
| MluNI | TGGCCA | 3 cut(s) | 50, 1060, 2385 |
| MlyI | GAGTC | 5 cut(s) | 152, 424, 571, 865, 1400 |
| MmeI | TCCRAC | 8 cut(s) | 61, 114, 978, 1290, 1362, 2147, 2766, 2855 |
| Mox20I | TGGCCA | 3 cut(s) | 50, 1060, 2385 |
| Mph1103I | ATGCAT | 2 cut(s) | 21, 280 |
| MscI | TGGCCA | 3 cut(s) | 50, 1060, 2385 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1304, 2654 |
| Msp20I | TGGCCA | 3 cut(s) | 50, 1060, 2385 |
| MspCI | CTTAAG | 1 cut(s) | 3131 |
| MspI | CCGG | 2 cut(s) | 1498, 1632 |
| MspR9I | CCNGG | 5 cut(s) | 47, 1633, 2991, 3062, 3167 |
| MunI | CAATTG | 6 cut(s) | 419, 566, 713, 860, 1415, 2141 |
| Mva1269I | GAATGC | 2 cut(s) | 19, 227 |
| MvaI | CCWGG | 4 cut(s) | 47, 2991, 3062, 3167 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 2102, 2241 |
| NciI | CCSGG | 1 cut(s) | 1633 |
| NcoI | CCATGG | 1 cut(s) | 1942 |
| NdeI | CATATG | 1 cut(s) | 442 |
| NlaIV | GGNNCC | 5 cut(s) | 1282, 1797, 2106, 2911, 3031 |
| NmuCI | GTSAC | 1 cut(s) | 3094 |
| NsbI | TGCGCA | 2 cut(s) | 497, 644 |
| NsiI | ATGCAT | 2 cut(s) | 21, 280 |
| NspI | RCATGY | 7 cut(s) | 125, 611, 905, 1027, 1309, 2068, 2659 |
| PaeI | GCATGC | 2 cut(s) | 125, 1309 |
| PagI | TCATGA | 2 cut(s) | 1120, 2551 |
| PciI | ACATGT | 5 cut(s) | 607, 901, 1023, 2064, 2655 |
| PctI | GAATGC | 2 cut(s) | 19, 227 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2996 |
| PfoI | TCCNGGA | 3 cut(s) | 1631, 2989, 3165 |
| PinAI | ACCGGT | 1 cut(s) | 1497 |
| PkrI | GCNGC | 5 cut(s) | 203, 1238, 1385, 2470, 2520 |
| PleI | GAGTC | 5 cut(s) | 152, 423, 570, 864, 1399 |
| PpsI | GAGTC | 5 cut(s) | 152, 423, 570, 864, 1399 |
| PpuMI | RGGWCCY | 1 cut(s) | 1280 |
| PscI | ACATGT | 5 cut(s) | 607, 901, 1023, 2064, 2655 |
| PshBI | ATTAAT | 1 cut(s) | 1152 |
| Psp124BI | GAGCTC | 4 cut(s) | 579, 726, 873, 1736 |
| Psp5II | RGGWCCY | 1 cut(s) | 1280 |
| Psp6I | CCWGG | 4 cut(s) | 45, 2989, 3060, 3165 |
| PspFI | CCCAGC | 3 cut(s) | 1792, 1798, 3085 |
| PspGI | CCWGG | 4 cut(s) | 45, 2989, 3060, 3165 |
| PspN4I | GGNNCC | 5 cut(s) | 1282, 1797, 2106, 2911, 3031 |
| PspOMI | GGGCCC | 1 cut(s) | 1795 |
| PspPI | GGNCC | 9 cut(s) | 358, 458, 752, 1280, 1795, 1796, 2421, 2485, 2966 |
| PspPPI | RGGWCCY | 1 cut(s) | 1280 |
| PsuI | RGATCY | 5 cut(s) | 1327, 1624, 1699, 1894, 1921 |
| RsaI | GTAC | 3 cut(s) | 1584, 2045, 2320 |
| RsaNI | GTAC | 3 cut(s) | 1583, 2044, 2319 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1304, 2654 |
| SacI | GAGCTC | 4 cut(s) | 579, 726, 873, 1736 |
| SatI | GCNGC | 5 cut(s) | 202, 1237, 1384, 2469, 2519 |
| Sau96I | GGNCC | 9 cut(s) | 358, 458, 752, 1280, 1795, 1796, 2421, 2485, 2966 |
| SchI | GAGTC | 5 cut(s) | 152, 424, 571, 865, 1400 |
| ScrFI | CCNGG | 5 cut(s) | 47, 1633, 2991, 3062, 3167 |
| SduI | GDGCHC | 5 cut(s) | 579, 726, 873, 1736, 1799 |
| SfaNI | GCATC | 5 cut(s) | 265, 580, 727, 874, 2160 |
| SfcI | CTRYAG | 1 cut(s) | 2249 |
| SinI | GGWCC | 7 cut(s) | 358, 458, 752, 1280, 2421, 2485, 2966 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1304, 2654 |
| SmlI | CTYRAG | 6 cut(s) | 983, 1009, 1534, 1787, 1975, 3131 |
| SmoI | CTYRAG | 6 cut(s) | 983, 1009, 1534, 1787, 1975, 3131 |
| SphI | GCATGC | 2 cut(s) | 125, 1309 |
| SsiI | CCGC | 4 cut(s) | 2519, 2541, 2687, 3214 |
| SspI | AATATT | 2 cut(s) | 1694, 2503 |
| SspMI | CTAG | 8 cut(s) | 1316, 1325, 1608, 1622, 1707, 2411, 2465, 2733 |
| SstI | GAGCTC | 4 cut(s) | 579, 726, 873, 1736 |
| StyD4I | CCNGG | 5 cut(s) | 45, 1631, 2989, 3060, 3165 |
| StyI | CCWWGG | 4 cut(s) | 1479, 1942, 2341, 3201 |
| TaaI | ACNGT | 8 cut(s) | 1051, 1752, 2318, 2421, 2669, 2973, 3004, 3040 |
| TaiI | ACGT | 1 cut(s) | 1531 |
| TaqI | TCGA | 3 cut(s) | 1347, 1967, 2057 |
| TauI | GCSGC | 1 cut(s) | 2521 |
| TscAI | CASTG | 8 cut(s) | 460, 607, 754, 901, 2022, 3082, 3087, 3103 |
| TseFI | GTSAC | 1 cut(s) | 3094 |
| TseI | GCWGC | 4 cut(s) | 201, 1236, 1383, 2468 |
| Tsp45I | GTSAC | 1 cut(s) | 3094 |
| TspDTI | ATGAA | 9 cut(s) | 391, 538, 685, 722, 832, 1109, 1946, 2465, 2792 |
| TspRI | CASTG | 8 cut(s) | 460, 607, 754, 901, 2022, 3082, 3087, 3103 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2996 |
| Vha464I | CTTAAG | 1 cut(s) | 3131 |
| VpaK11BI | GGWCC | 7 cut(s) | 358, 458, 752, 1280, 2421, 2485, 2966 |
| VspI | ATTAAT | 1 cut(s) | 1152 |
| XbaI | TCTAGA | 1 cut(s) | 2732 |
| XceI | RCATGY | 7 cut(s) | 125, 611, 905, 1027, 1309, 2068, 2659 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2479 |
| XmiI | GTMKAC | 1 cut(s) | 3114 |
| XspI | CTAG | 8 cut(s) | 1316, 1325, 1608, 1622, 1707, 2411, 2465, 2733 |
| Zsp2I | ATGCAT | 2 cut(s) | 21, 280 |