Rw7G019460

Leucine Rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000028
Physical Location & Seq
Reverse (-)
21518387 .. 21521254
2868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019460.1

Sequence Viewer

Length: 2868 bp
ATGCCGATCAAGTCAGTCAATGGAGCAACTCCATTGCTGTTTCCACGATTATACATGTGTAGTTTCCAAAATCCTTTTGCTTCAACTATATATTACTTCACTTTGGTTTGGTTGCATATCATCTTCATAATCATGAGTGGTGGGTCTATGCATTCTGGTTTGGTTGGGCTTGTGTGCCTGGCCATTGCCTCTGCTATTTGTTGCTCAAGTGTTGGAAGCTCCAACAACATCATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGAGTCCAGTGCTCTTGCCTCTTGGAAAAGTGAGAAAGATTGCTGCAACTGGAGAGGAATAGCGTGCAACAACCAAACAGGTCATGTCACCAGACTTGATTTCTCCTTTAATTATGATCCATATCTCTATTATGCTGAAGTTCCTTTAGGTGGTGAAATTAGTCCTTCACTACTTGAATTGCGATATCTAAATTACTTGGACCTCAGTTCTATTGATTTTAGAGAAAATATGATTCCCAAGTTCATTGGTTCTTTGAGTCAATTGAAAGAACTCAAACTTGCAGGTGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTCAAGGTAACGATGATGTTAGTTCTGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCAAAAGTAGATTTGTCAAAGGTTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTCGCTGACCGAGCTTCAGTTATCTTCCTGTCATCTTCCTGATGTCAATCTAAGATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAAATTCTTCACCTCTCTGAGAACTCTCTGCTTAATTCTTCAATATTTTATTGGATAGCCAATGTCAGCAGCAACTTTGTCCATATTGATCTCCGTTCCAACAATCTTGAAGGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTATATCTCTCTGCCAATCAACTTGAAGGTGGGATACCGAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGATCTTATATGACAACCAATTGTCTGAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGACACCTTGGACTTGGGTTTTAACCAATTTTGGGGGTCCTGGCCAGATTTGAAACGTTTTTCAAAGATAACTCTCTTATATCTTAACGGGAATCAACTAAATGGGTCTGTACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGAATCATTATTTCTCTCCAGGAATTTTTTGAGTGGTGTCATAACACAAGCCCACTTTTTGAACCTCTCTCGTTTACAGAGTTTGGGTATTTCTGGTAATCGTTTCTCTATCAACCTGAGCTCTGATTGGAATCCACCATTTCAACTTACTGGTTGGTTAGGTATGTCCTCTCTCAAGGTGGGCCCAGCTTTTCCCAAGTGGATTCTAACGCAGACAAATCTTACTCAGCTTTCTCTCTCTAATGCTGGACTATCAGGAAAACTGCCGAATCTGTCATCGACAAGCTTGCGTTATGTTAACTTGTCTTCTAATCTACTTTCTGGTGCAGTGCCATCATTTTCTCCTATGCCACAAAACCTGTATCTCTCGAATAATAGGTTTTCAGGACCTTTGTCTTCCTTATGTGCAACGCAGTGCTCTCAATGTTTAATTGATCTTGACATTTCTAAGAACCTATTGTCTGGGGAGCTTCCAAATTGTTGGATGCAATTTCAAAATTTGCAAGGGTTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTCGTTAGGCAATCTACAGAGTATTGCGATATTGCGTTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCCACTTATTGATGGTTGACCTTGGCAACAATAACTTGTCGGGAAAGATACCAACATGGATTGGCCAAAGCCTACCAAACTTGGTGATTCTACGCTTACCGTCCAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCAGTCTAGCTGCCATTCATGTTTTGGACCTCTCTCACAACAATATTTCAGGAGGCTTGCCACATTGCTTCAGTAACATAACCTCTTTGGCTAATGATTCGGGATTTGTTGGTTTTATTGTGGAACTTGTGTGGAAAGGAATAGAAATTGAGTTTGGGGAAAATCTTGACGGTATGAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGGAAATTCCGCCAAGTATAGCAACTATGACAGAGTTGATTTCTCTGAACCTGTCTAGAAATAAATTGACGGGAAAGCTTCCTGAAGACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCAGATCTCTGGTAAAATTCCTGCAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCACACAACAACTTGTCAGGAAGAATTCCACTTGGCACTCAACTTCAAAGTTTTGATGCTTCTAAATATATGGAAAATCTTGGACTTTGTGGACCACCGCTGACACAAAGCTGTCCAGGAGATGGAACAGTTCAAGATGATGGAATCGTGAGAGGAACTGAAATTGATAACAAGGAACAGGTTAATGATGGTCTCATAAGCCTTGGATTCTTTACTAGTGCAGTGCTGGGATTCGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTAAGACTTCTTTGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATTTATGTCAAAACTGCTGTGTACAAGGCAAAAGTGCGGAGGACACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

955

Amino Acids

104.98

Weight (kDa)

5.71

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 81 - 119 3.2e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 148 - 341 1.8e-10 Leucine-rich repeat region
LRR_8 PF13855 314 - 370 3.7e-07 Leucine rich repeat
LRR_8 PF13855 410 - 470 3e-06 Leucine rich repeat
LRR_8 PF13855 751 - 809 2.5e-10 Leucine rich repeat
LRR_8 PF13855 793 - 833 2.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 560
Acc36I ACCTGC 1 cut(s) 560
AccB7I CCANNNNNTGG 1 cut(s) 2606
AciI CCGC 4 cut(s) 2297, 2582, 2742, 2848
AclI AACGTT 1 cut(s) 1219
AclWI GGATC 1 cut(s) 398
AcoI YGGCCR 4 cut(s) 180, 746, 1205, 2002
AcsI RAATTY 7 cut(s) 861, 1327, 1801, 1816, 2292, 2436, 2508
AcuI CTGAAG 4 cut(s) 444, 770, 2131, 2391
AfaI GTAC 3 cut(s) 1275, 1939, 2834
AfiI CCNNNNNNNGG 4 cut(s) 437, 605, 1195, 2606
AflII CTTAAG 1 cut(s) 2756
AflIII ACRYGT 2 cut(s) 54, 711
AhlI ACTAGT 1 cut(s) 2699
AjnI CCWGG 5 cut(s) 177, 1202, 1322, 2599, 2790
AjuI GAANNNNNNNTTGG 2 cut(s) 2214, 2246
Alw21I GWGCWC 3 cut(s) 301, 1427, 1724
Alw26I GTCTC 1 cut(s) 2681
AlwI GGATC 1 cut(s) 398
Ama87I CYCGRG 1 cut(s) 1277
AoxI GGCC 6 cut(s) 180, 277, 746, 1205, 1486, 2002
ApaI GGGCCC 1 cut(s) 1490
ApeKI GCWGC 4 cut(s) 330, 927, 1074, 2087
ApoI RAATTY 7 cut(s) 861, 1327, 1801, 1816, 2292, 2436, 2508
AseI ATTAAT 1 cut(s) 840
AspS9I GGNCC 9 cut(s) 487, 587, 971, 1200, 1486, 1487, 1691, 2104, 2576
AsuHPI GGTGA 4 cut(s) 367, 452, 860, 2035
AvaI CYCGRG 1 cut(s) 1277
AvaII GGWCC 7 cut(s) 487, 587, 971, 1200, 1691, 2104, 2576
BaeGI GKGCMC 1 cut(s) 1490
BalI TGGCCA 4 cut(s) 182, 748, 1207, 2004
BanII GRGCYC 2 cut(s) 1427, 1490
BarI GAAGNNNNNNTAC 2 cut(s) 1032, 1064
BbsI GAAGAC 4 cut(s) 979, 1602, 1692, 2379
Bbv12I GWGCWC 3 cut(s) 301, 1427, 1724
BbvI GCAGC 4 cut(s) 317, 939, 1086, 2074
BccI CCATC 7 cut(s) 983, 1645, 1945, 2600, 2618, 2666, 2728
BcgI CGANNNNNNTGC 2 cut(s) 1573, 1607
BciT130I CCWGG 5 cut(s) 179, 1204, 1324, 2601, 2792
BciVI GTATCC 1 cut(s) 1041
BcoDI GTCTC 1 cut(s) 2681
BcuI ACTAGT 1 cut(s) 2699
BfaI CTAG 5 cut(s) 1007, 1299, 2084, 2343, 2700
BfmI CTRYAG 1 cut(s) 1868
BfrI CTTAAG 1 cut(s) 2756
BfuAI ACCTGC 1 cut(s) 560
BfuI GTATCC 1 cut(s) 1041
BglII AGATCT 1 cut(s) 2424
BisI GCNGC 5 cut(s) 331, 928, 1075, 2088, 2743
BlsI GCNGC 5 cut(s) 332, 929, 1076, 2089, 2744
Bme1390I CCNGG 5 cut(s) 179, 1204, 1324, 2601, 2792
Bme18I GGWCC 7 cut(s) 487, 587, 971, 1200, 1691, 2104, 2576
BmeT110I CYCGRG 1 cut(s) 1277
BmgT120I GGNCC 9 cut(s) 487, 587, 971, 1200, 1486, 1487, 1691, 2104, 2576
BmiI GGNNCC 3 cut(s) 973, 1201, 1488
BmrFI CCNGG 5 cut(s) 179, 1204, 1324, 2601, 2792
BmsI GCATC 2 cut(s) 1779, 2530
BoxI GACNNNNGTC 1 cut(s) 1696
BpiI GAAGAC 4 cut(s) 979, 1602, 1692, 2379
BpmI CTGGAG 3 cut(s) 248, 358, 1306
Bpu10I CCTNAGC 1 cut(s) 1421
BpuEI CTTGAG 4 cut(s) 190, 692, 718, 1463
BsaBI GATNNNNATC 3 cut(s) 408, 816, 1434
BsaI GGTCTC 1 cut(s) 2681
BsaJI CCNNGG 3 cut(s) 1170, 1960, 2686
Bsc4I CCNNNNNNNGG 4 cut(s) 437, 605, 1195, 2606
Bse1I ACTGG 5 cut(s) 265, 294, 341, 1459, 2728
Bse3DI GCAATG 3 cut(s) 32, 183, 2140
Bse8I GATNNNNATC 3 cut(s) 408, 816, 1434
BseBI CCWGG 5 cut(s) 179, 1204, 1324, 2601, 2792
BseDI CCNNGG 3 cut(s) 1170, 1960, 2686
BseGI GGATG 4 cut(s) 292, 975, 1794, 2739
BseJI GATNNNNATC 3 cut(s) 408, 816, 1434
BseLI CCNNNNNNNGG 4 cut(s) 437, 605, 1195, 2606
BseMI GCAATG 3 cut(s) 32, 183, 2140
BseMII CTCAG 5 cut(s) 505, 867, 1143, 1412, 1544
BseNI ACTGG 5 cut(s) 265, 294, 341, 1459, 2728
BseSI GKGCMC 1 cut(s) 1490
BseXI GCAGC 4 cut(s) 317, 939, 1086, 2074
BseYI CCCAGC 2 cut(s) 1489, 2710
BsgI GTGCAG 3 cut(s) 1650, 2098, 2724
BshFI GGCC 6 cut(s) 182, 279, 748, 1207, 1488, 2004
BsiHKAI GWGCWC 3 cut(s) 301, 1427, 1724
BsiHKCI CYCGRG 1 cut(s) 1277
BslFI GGGAC 1 cut(s) 957
BslI CCNNNNNNNGG 4 cut(s) 437, 605, 1195, 2606
BsmAI GTCTC 1 cut(s) 2681
BsmFI GGGAC 1 cut(s) 957
BsmI GAATGC 1 cut(s) 151
BsnI GGCC 6 cut(s) 182, 279, 748, 1207, 1488, 2004
Bso31I GGTCTC 1 cut(s) 2681
BsoBI CYCGRG 1 cut(s) 1277
Bsp120I GGGCCC 1 cut(s) 1486
Bsp1286I GDGCHC 4 cut(s) 301, 1427, 1490, 1724
Bsp1407I TGTACA 1 cut(s) 2832
Bsp143I GATC 8 cut(s) 6, 403, 634, 824, 946, 1089, 1738, 2424
BspACI CCGC 4 cut(s) 2297, 2582, 2742, 2848
BspANI GGCC 6 cut(s) 182, 279, 748, 1207, 1488, 2004
BspCNI CTCAG 5 cut(s) 504, 868, 1144, 1413, 1543
BspHI TCATGA 1 cut(s) 132
BspLI GGNNCC 3 cut(s) 973, 1201, 1488
BspMI ACCTGC 1 cut(s) 560
BspPI GGATC 1 cut(s) 398
BspQI GCTCTTC 1 cut(s) 264
BspTI CTTAAG 1 cut(s) 2756
BspTNI GGTCTC 1 cut(s) 2681
BsrDI GCAATG 3 cut(s) 32, 183, 2140
BsrGI TGTACA 1 cut(s) 2832
BsrI ACTGG 5 cut(s) 265, 294, 341, 1459, 2728
BssECI CCNNGG 3 cut(s) 1170, 1960, 2686
BssMI GATC 8 cut(s) 6, 403, 634, 824, 946, 1089, 1738, 2424
BssT1I CCWWGG 3 cut(s) 1170, 1960, 2686
Bst2UI CCWGG 5 cut(s) 179, 1204, 1324, 2601, 2792
Bst4CI ACNGT 4 cut(s) 1937, 2040, 2249, 2614
Bst6I CTCTTC 2 cut(s) 264, 861
BstAFI CTTAAG 1 cut(s) 2756
BstAPI GCANNNNNTGC 1 cut(s) 2450
BstAUI TGTACA 1 cut(s) 2832
BstC8I GCNNGC 7 cut(s) 255, 352, 764, 998, 1592, 2135, 2455
BstDEI CTNAG 9 cut(s) 491, 821, 876, 1078, 1152, 1421, 1530, 1752, 2468
BstF5I GGATG 4 cut(s) 292, 975, 1794, 2739
BstKTI GATC 8 cut(s) 9, 406, 637, 827, 949, 1092, 1741, 2427
BstMAI GTCTC 1 cut(s) 2681
BstMBI GATC 8 cut(s) 6, 403, 634, 824, 946, 1089, 1738, 2424
BstMWI GCNNNNNNNGC 4 cut(s) 772, 781, 1860, 2450
BstNI CCWGG 5 cut(s) 179, 1204, 1324, 2601, 2792
BstNSI RCATGY 4 cut(s) 58, 257, 715, 1000
BstPAI GACNNNNGTC 1 cut(s) 1696
BstSCI CCNGG 5 cut(s) 177, 1202, 1322, 2599, 2790
BstSFI CTRYAG 1 cut(s) 1868
BstSLI GKGCMC 1 cut(s) 1490
BstV1I GCAGC 4 cut(s) 317, 939, 1086, 2074
BstV2I GAAGAC 4 cut(s) 979, 1602, 1692, 2379
BstX2I RGATCY 1 cut(s) 2424
BstXI CCANNNNNNTGG 2 cut(s) 1785, 2429
BstYI RGATCY 1 cut(s) 2424
BsuI GTATCC 1 cut(s) 1041
BsuRI GGCC 6 cut(s) 182, 279, 748, 1207, 1488, 2004
BtsCI GGATG 4 cut(s) 292, 975, 1794, 2739
BtsI GCAGTG 3 cut(s) 1638, 1724, 2712
BtsIMutI CAGTG 6 cut(s) 301, 589, 1638, 1724, 2712, 2721
BveI ACCTGC 1 cut(s) 560
Cac8I GCNNGC 7 cut(s) 255, 352, 764, 998, 1592, 2135, 2455
CciI TCATGA 1 cut(s) 132
Cfr13I GGNCC 9 cut(s) 487, 587, 971, 1200, 1486, 1487, 1691, 2104, 2576
Csp6I GTAC 3 cut(s) 1274, 1938, 2833
CviQI GTAC 3 cut(s) 1274, 1938, 2833
DdeI CTNAG 9 cut(s) 491, 821, 876, 1078, 1152, 1421, 1530, 1752, 2468
DpnI GATC 8 cut(s) 8, 405, 636, 826, 948, 1091, 1740, 2426
DpnII GATC 8 cut(s) 6, 403, 634, 824, 946, 1089, 1738, 2424
EaeI YGGCCR 4 cut(s) 180, 746, 1205, 2002
Eam1104I CTCTTC 2 cut(s) 264, 861
EarI CTCTTC 2 cut(s) 264, 861
EciI GGCGGA 1 cut(s) 2286
Ecl136II GAGCTC 1 cut(s) 1425
Eco130I CCWWGG 3 cut(s) 1170, 1960, 2686
Eco147I AGGCCT 1 cut(s) 279
Eco24I GRGCYC 2 cut(s) 1427, 1490
Eco31I GGTCTC 1 cut(s) 2681
Eco32I GATATC 1 cut(s) 473
Eco47I GGWCC 7 cut(s) 487, 587, 971, 1200, 1691, 2104, 2576
Eco53kI GAGCTC 1 cut(s) 1425
Eco57I CTGAAG 4 cut(s) 444, 770, 2131, 2391
Eco88I CYCGRG 1 cut(s) 1277
EcoICRI GAGCTC 1 cut(s) 1425
EcoO109I RGGNCCY 3 cut(s) 971, 1200, 1691
EcoRI GAATTC 1 cut(s) 2508
EcoRII CCWGG 5 cut(s) 177, 1202, 1322, 2599, 2790
EcoRV GATATC 1 cut(s) 473
EcoT14I CCWWGG 3 cut(s) 1170, 1960, 2686
EcoT22I ATGCAT 1 cut(s) 153
EcoT38I GRGCYC 2 cut(s) 1427, 1490
ErhI CCWWGG 3 cut(s) 1170, 1960, 2686
FaqI GGGAC 1 cut(s) 957
Fnu4HI GCNGC 5 cut(s) 331, 928, 1075, 2088, 2743
FokI GGATG 4 cut(s) 299, 962, 1801, 2746
FriOI GRGCYC 2 cut(s) 1427, 1490
Fsp4HI GCNGC 5 cut(s) 331, 928, 1075, 2088, 2743
FspBI CTAG 5 cut(s) 1007, 1299, 2084, 2343, 2700
GluI GCNGC 5 cut(s) 331, 928, 1075, 2088, 2743
GsaI CCCAGC 2 cut(s) 1493, 2714
GsuI CTGGAG 3 cut(s) 248, 358, 1306
HaeIII GGCC 6 cut(s) 182, 279, 748, 1207, 1488, 2004
HincII GTYRAC 2 cut(s) 1603, 1957
HindII GTYRAC 2 cut(s) 1603, 1957
HindIII AAGCTT 2 cut(s) 1588, 2363
HpaI GTTAAC 1 cut(s) 1603
HphI GGTGA 4 cut(s) 367, 452, 860, 2035
Hpy166II GTNNAC 8 cut(s) 587, 1379, 1603, 1892, 1957, 2576, 2750, 2833
Hpy188I TCNGA 6 cut(s) 664, 877, 1114, 1429, 2334, 2786
Hpy8I GTNNAC 8 cut(s) 587, 1379, 1603, 1892, 1957, 2576, 2750, 2833
HpyAV CCTTC 5 cut(s) 462, 962, 1034, 1932, 2077
HpyCH4III ACNGT 4 cut(s) 1937, 2040, 2249, 2614
HpyCH4IV ACGT 1 cut(s) 1219
HpyF10VI GCNNNNNNNGC 4 cut(s) 772, 781, 1860, 2450
HpyF3I CTNAG 9 cut(s) 491, 821, 876, 1078, 1152, 1421, 1530, 1752, 2468
HpySE526I ACGT 1 cut(s) 1219
KspAI GTTAAC 1 cut(s) 1603
Kzo9I GATC 8 cut(s) 6, 403, 634, 824, 946, 1089, 1738, 2424
LguI GCTCTTC 1 cut(s) 264
LmnI GCTCC 3 cut(s) 23, 224, 1771
Lsp1109I GCAGC 4 cut(s) 317, 939, 1086, 2074
LweI GCATC 2 cut(s) 1779, 2530
MaeI CTAG 5 cut(s) 1007, 1299, 2084, 2343, 2700
MaeII ACGT 1 cut(s) 1219
MaeIII GTNAC 6 cut(s) 373, 644, 1009, 2150, 2381, 2719
MalI GATC 8 cut(s) 8, 405, 636, 826, 948, 1091, 1740, 2426
MboI GATC 8 cut(s) 6, 403, 634, 824, 946, 1089, 1738, 2424
MfeI CAATTG 2 cut(s) 548, 1106
MflI RGATCY 1 cut(s) 2424
MhlI GDGCHC 4 cut(s) 301, 1427, 1490, 1724
MlsI TGGCCA 4 cut(s) 182, 748, 1207, 2004
MluNI TGGCCA 4 cut(s) 182, 748, 1207, 2004
MlyI GAGTC 4 cut(s) 299, 553, 1091, 1121
MmeI TCCRAC 5 cut(s) 193, 246, 981, 1766, 2376
Mox20I TGGCCA 4 cut(s) 182, 748, 1207, 2004
Mph1103I ATGCAT 1 cut(s) 153
MscI TGGCCA 4 cut(s) 182, 748, 1207, 2004
MslI CAYNNNNRTG 3 cut(s) 131, 995, 2390
Msp20I TGGCCA 4 cut(s) 182, 748, 1207, 2004
MspA1I CMGCKG 1 cut(s) 2584
MspCI CTTAAG 1 cut(s) 2756
MspR9I CCNGG 5 cut(s) 179, 1204, 1324, 2601, 2792
MunI CAATTG 2 cut(s) 548, 1106
Mva1269I GAATGC 1 cut(s) 151
MvaI CCWGG 5 cut(s) 179, 1204, 1324, 2601, 2792
MwoI GCNNNNNNNGC 4 cut(s) 772, 781, 1860, 2450
NdeII GATC 8 cut(s) 6, 403, 634, 824, 946, 1089, 1738, 2424
NlaIV GGNNCC 3 cut(s) 973, 1201, 1488
NmuCI GTSAC 2 cut(s) 373, 2719
NsiI ATGCAT 1 cut(s) 153
NspI RCATGY 4 cut(s) 58, 257, 715, 1000
PaeI GCATGC 2 cut(s) 257, 1000
PagI TCATGA 1 cut(s) 132
PaqCI CACCTGC 1 cut(s) 560
PceI AGGCCT 1 cut(s) 279
PciI ACATGT 2 cut(s) 54, 711
PciSI GCTCTTC 1 cut(s) 264
PctI GAATGC 1 cut(s) 151
PflMI CCANNNNNTGG 1 cut(s) 2606
PfoI TCCNGGA 3 cut(s) 1322, 2599, 2790
PkrI GCNGC 5 cut(s) 332, 929, 1076, 2089, 2744
PleI GAGTC 4 cut(s) 298, 552, 1090, 1121
PpsI GAGTC 4 cut(s) 298, 552, 1090, 1121
PpuMI RGGWCCY 3 cut(s) 971, 1200, 1691
PscI ACATGT 2 cut(s) 54, 711
PshAI GACNNNNGTC 1 cut(s) 1696
PshBI ATTAAT 1 cut(s) 840
Psp124BI GAGCTC 1 cut(s) 1427
Psp1406I AACGTT 1 cut(s) 1219
Psp5II RGGWCCY 3 cut(s) 971, 1200, 1691
Psp6I CCWGG 5 cut(s) 177, 1202, 1322, 2599, 2790
PspFI CCCAGC 2 cut(s) 1489, 2710
PspGI CCWGG 5 cut(s) 177, 1202, 1322, 2599, 2790
PspN4I GGNNCC 3 cut(s) 973, 1201, 1488
PspOMI GGGCCC 1 cut(s) 1486
PspPI GGNCC 9 cut(s) 487, 587, 971, 1200, 1486, 1487, 1691, 2104, 2576
PspPPI RGGWCCY 3 cut(s) 971, 1200, 1691
PsuI RGATCY 1 cut(s) 2424
RsaI GTAC 3 cut(s) 1275, 1939, 2834
RsaNI GTAC 3 cut(s) 1274, 1938, 2833
RseI CAYNNNNRTG 3 cut(s) 131, 995, 2390
SacI GAGCTC 1 cut(s) 1427
SapI GCTCTTC 1 cut(s) 264
SatI GCNGC 5 cut(s) 331, 928, 1075, 2088, 2743
Sau3AI GATC 8 cut(s) 6, 403, 634, 824, 946, 1089, 1738, 2424
Sau96I GGNCC 9 cut(s) 487, 587, 971, 1200, 1486, 1487, 1691, 2104, 2576
SchI GAGTC 4 cut(s) 299, 553, 1091, 1121
ScrFI CCNGG 5 cut(s) 179, 1204, 1324, 2601, 2792
SduI GDGCHC 4 cut(s) 301, 1427, 1490, 1724
SfaNI GCATC 2 cut(s) 1779, 2530
SfcI CTRYAG 1 cut(s) 1868
SinI GGWCC 7 cut(s) 487, 587, 971, 1200, 1691, 2104, 2576
SmiMI CAYNNNNRTG 3 cut(s) 131, 995, 2390
SmlI CTYRAG 5 cut(s) 205, 671, 697, 1478, 2756
SmoI CTYRAG 5 cut(s) 205, 671, 697, 1478, 2756
SpeI ACTAGT 1 cut(s) 2699
SphI GCATGC 2 cut(s) 257, 1000
SseBI AGGCCT 1 cut(s) 279
SsiI CCGC 4 cut(s) 2297, 2582, 2742, 2848
SspI AATATT 2 cut(s) 903, 2122
SspMI CTAG 5 cut(s) 1007, 1299, 2084, 2343, 2700
SstI GAGCTC 1 cut(s) 1427
StuI AGGCCT 1 cut(s) 279
StyD4I CCNGG 5 cut(s) 177, 1202, 1322, 2599, 2790
StyI CCWWGG 3 cut(s) 1170, 1960, 2686
TaaI ACNGT 4 cut(s) 1937, 2040, 2249, 2614
TaiI ACGT 1 cut(s) 1222
TaqI TCGA 2 cut(s) 1583, 1673
TaqII GACCGA 1 cut(s) 794
TatI WGTACW 1 cut(s) 2832
TauI GCSGC 1 cut(s) 2745
TscAI CASTG 6 cut(s) 301, 589, 1638, 1724, 2712, 2728
TseFI GTSAC 2 cut(s) 373, 2719
TseI GCWGC 4 cut(s) 330, 927, 1074, 2087
Tsp45I GTSAC 2 cut(s) 373, 2719
TspDTI ATGAA 4 cut(s) 115, 520, 2084, 2402
TspGWI ACGGA 1 cut(s) 941
TspRI CASTG 6 cut(s) 301, 589, 1638, 1724, 2712, 2728
Van91I CCANNNNNTGG 1 cut(s) 2606
Vha464I CTTAAG 1 cut(s) 2756
VpaK11BI GGWCC 7 cut(s) 487, 587, 971, 1200, 1691, 2104, 2576
VspI ATTAAT 1 cut(s) 840
XapI RAATTY 7 cut(s) 861, 1327, 1801, 1816, 2292, 2436, 2508
XbaI TCTAGA 1 cut(s) 2342
XceI RCATGY 4 cut(s) 58, 257, 715, 1000
XcmI CCANNNNNNNNNTGG 1 cut(s) 2098
XspI CTAG 5 cut(s) 1007, 1299, 2084, 2343, 2700
Zsp2I ATGCAT 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.