Rroxscaffold_3G00243730

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
36177890 .. 36187388
9499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00243730.1

Sequence Viewer

Length: 1497 bp
ATGAACAAAGAACTATTTTCTAATGAAAATATTCTAGGCTTGAAAGATCCTAATAGGCCTTTCCCCACTGGTCAAGCTGGTGATGCAGCAGGTGTTGGTCTTTTGAAATGGAGAATGCAGAGTCAAGATGAATCATTGGTGCCTCTACAAATCAACTGTTGGCCCTCTGTTTCTGGAAATGAAACCTATGTCAACATTGAGTATGATGCTTCATCAATGTTCGATCTGCGAAATGTTGTCATTTCAGTACCTCTTCCAGCTCTCAGAGAGGCTCCAGTTGTGAAGGAGATTCATGGTGAATGGAGGTGGAGCCCCTCCCAAGTTCGCTCAGAGAACACAGTTGCTCACAGAGAACTACCAGGCTTTCTGGACCCCCTGAGTTCCTTGTGTGCAACACAGGCTCCAGATTTCTGGATTCTCGACCTTTCTGTAAACCTAATGTCAGGGGAACTTCCTAATTGCTGGATGCAATTTTCAGGATTAATTTTCCTGAATTTAGGAAAGAATAAATTTTCTGGAGAACTACCAAGCTCGTTAGGCAATTTACAAGTATTGTATATATTGCCTTTACATGGTAACAACTTTTCTGGAGAACTGCCTTCTCTTGAGAACTGTACAATACTAGGAGTTGTTGACCTTGGAGCAAATAAATTATCCGGAAAAATCCCACCATGGATAGGCCAAAGCCTAACATGGTTGTTGGTTCTACGCCTACAGTCTAATGAGTTCAACGGAATAATACCCTCATCCCTGTGCAGTTTAAGCTCCATTCATGTTTTGGACCTCTCTCAGAACAATTTATCAGGAGCCTTGCCGCATTGCTTCATGGAAAGGAGTAGAGAACTAGAGATTGAGTTTGGGGAAAATCTTATATATTTGAGAAGCATTGGCATTTCAAGCAATCACTTGGTTGGGGATATTCCTGAAAATATAACAAGCATGCTAAAGTTGAATTCTCCAAACCTCTCAAGAAACAATTTGACAGGGAAGATTCCTGAAAAGTTTGGTAACCTGGCCATGTTAGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTAGAATTCCTTCAAGTTTTTCGAACTTAAACTTTCTTAGTGTCTTGGACTTATCATACAACCACTTGTCTGGAAGAATTCCACCAAGCACTCAACTTCAGAGTTTTAATGCTTCTGCCTATATGGGAAATAGTGGACTTTGCGGACCACCACTTACACAACAATGCCCTGGAGATGGAACAACACAATATCGTGGAGTCACTCCTGGTACTGAAAATGATGATGATGATGGTATCATAAGCATGGGATTCTTTGTCAGTATAGTGCTTGGATTCGCCACTGGATTTTGGATAGTCTGTGGCAGTTTACTGCTTAAGAGCTCTTGGAGACACGTCTATTTCAGGTTCCTGGATGATACAAGAGATTGGGTTTATCAGTTTATGTCAAAACTGCTCTGTACAAGGCAAAAGTGCAGAGGAGACTTCACAGATAAATGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

498

Amino Acids

55.2

Weight (kDa)

5.28

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adap_comp_sub PF00928 4 - 106 2.8e-15 Adaptor complexes medium subunit family
LRR_8 PF13855 293 - 351 3.8e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 80
Acc36I ACCTGC 1 cut(s) 80
AccB1I GGYRCC 1 cut(s) 139
AccIII TCCGGA 1 cut(s) 656
AciI CCGC 2 cut(s) 815, 1200
AclWI GGATC 1 cut(s) 41
AcoI YGGCCR 1 cut(s) 1014
AcsI RAATTY 5 cut(s) 493, 509, 952, 1062, 1134
AcuI CTGAAG 1 cut(s) 1139
AfaI GTAC 4 cut(s) 249, 616, 1267, 1456
AfiI CCNNNNNNNGG 3 cut(s) 572, 677, 1232
AflII CTTAAG 1 cut(s) 1370
AflIII ACRYGT 1 cut(s) 1387
AgsI TTSAA 6 cut(s) 43, 106, 730, 897, 952, 1071
AjiI CACGTC 1 cut(s) 1390
AjnI CCWGG 5 cut(s) 358, 1011, 1225, 1261, 1404
AluBI AGCT 5 cut(s) 77, 260, 531, 765, 1377
AluI AGCT 5 cut(s) 77, 260, 531, 765, 1377
Alw21I GWGCWC 1 cut(s) 1379
Alw26I GTCTC 2 cut(s) 1378, 1470
AlwI GGATC 1 cut(s) 41
Aor13HI TCCGGA 1 cut(s) 656
AoxI GGCC 4 cut(s) 56, 161, 679, 1014
ApeKI GCWGC 1 cut(s) 86
ApoI RAATTY 5 cut(s) 493, 509, 952, 1062, 1134
AseI ATTAAT 1 cut(s) 482
Asp700I GAANNNNTTC 2 cut(s) 30, 1066
AspS9I GGNCC 4 cut(s) 162, 370, 781, 1202
AsuHPI GGTGA 2 cut(s) 92, 308
AsuII TTCGAA 1 cut(s) 1079
AvaII GGWCC 3 cut(s) 370, 781, 1202
BalI TGGCCA 1 cut(s) 1016
BanI GGYRCC 1 cut(s) 139
BanII GRGCYC 2 cut(s) 314, 1379
BarI GAAGNNNNNNTAC 2 cut(s) 1051, 1083
Bbv12I GWGCWC 1 cut(s) 1379
BbvI GCAGC 1 cut(s) 98
BccI CCATC 2 cut(s) 1226, 1280
BciT130I CCWGG 5 cut(s) 360, 1013, 1227, 1263, 1406
BcoDI GTCTC 2 cut(s) 1378, 1470
BfaI CTAG 3 cut(s) 35, 623, 845
BfmI CTRYAG 1 cut(s) 713
BfrI CTTAAG 1 cut(s) 1370
BfuAI ACCTGC 1 cut(s) 80
BisI GCNGC 2 cut(s) 87, 815
BlsI GCNGC 2 cut(s) 88, 816
Bme1390I CCNGG 5 cut(s) 360, 1013, 1227, 1263, 1406
Bme18I GGWCC 3 cut(s) 370, 781, 1202
BmgBI CACGTC 1 cut(s) 1390
BmgT120I GGNCC 4 cut(s) 162, 370, 781, 1202
BmiI GGNNCC 7 cut(s) 141, 273, 311, 372, 402, 808, 1403
BmrFI CCNGG 5 cut(s) 360, 1013, 1227, 1263, 1406
BmsI GCATC 3 cut(s) 73, 196, 456
BpmI CTGGAG 5 cut(s) 258, 387, 537, 609, 1248
Bpu14I TTCGAA 1 cut(s) 1079
BpuEI CTTGAG 2 cut(s) 626, 952
BsaJI CCNNGG 3 cut(s) 637, 671, 1225
BsaWI WCCGGW 1 cut(s) 656
BsaXI ACNNNNNCTCC 2 cut(s) 385, 415
Bsc4I CCNNNNNNNGG 3 cut(s) 572, 677, 1232
Bse1I ACTGG 3 cut(s) 73, 275, 1342
Bse3DI GCAATG 1 cut(s) 817
BseAI TCCGGA 1 cut(s) 656
BseBI CCWGG 5 cut(s) 360, 1013, 1227, 1263, 1406
BseDI CCNNGG 3 cut(s) 637, 671, 1225
BseGI GGATG 3 cut(s) 471, 746, 1414
BseLI CCNNNNNNNGG 3 cut(s) 572, 677, 1232
BseMI GCAATG 1 cut(s) 817
BseMII CTCAG 4 cut(s) 277, 342, 368, 803
BseNI ACTGG 3 cut(s) 73, 275, 1342
BseRI GAGGAG 1 cut(s) 1488
BseXI GCAGC 1 cut(s) 98
BsgI GTGCAG 2 cut(s) 775, 1489
BshFI GGCC 4 cut(s) 58, 163, 681, 1016
BshNI GGYRCC 1 cut(s) 139
BsiHKAI GWGCWC 1 cut(s) 1379
BsiSI CCGG 1 cut(s) 657
BslI CCNNNNNNNGG 3 cut(s) 572, 677, 1232
BsmAI GTCTC 2 cut(s) 1378, 1470
BsmI GAATGC 1 cut(s) 120
BsnI GGCC 4 cut(s) 58, 163, 681, 1016
Bsp119I TTCGAA 1 cut(s) 1079
Bsp1286I GDGCHC 2 cut(s) 314, 1379
Bsp13I TCCGGA 1 cut(s) 656
Bsp1407I TGTACA 2 cut(s) 614, 1454
Bsp143I GATC 2 cut(s) 46, 223
Bsp19I CCATGG 1 cut(s) 671
BspACI CCGC 2 cut(s) 815, 1200
BspANI GGCC 4 cut(s) 58, 163, 681, 1016
BspCNI CTCAG 4 cut(s) 276, 341, 369, 802
BspEI TCCGGA 1 cut(s) 656
BspLI GGNNCC 7 cut(s) 141, 273, 311, 372, 402, 808, 1403
BspMI ACCTGC 1 cut(s) 80
BspPI GGATC 1 cut(s) 41
BspT104I TTCGAA 1 cut(s) 1079
BspT107I GGYRCC 1 cut(s) 139
BspTI CTTAAG 1 cut(s) 1370
BsrDI GCAATG 1 cut(s) 817
BsrGI TGTACA 2 cut(s) 614, 1454
BsrI ACTGG 3 cut(s) 73, 275, 1342
BssECI CCNNGG 3 cut(s) 637, 671, 1225
BssMI GATC 2 cut(s) 46, 223
BssT1I CCWWGG 2 cut(s) 637, 671
Bst2UI CCWGG 5 cut(s) 360, 1013, 1227, 1263, 1406
Bst4CI ACNGT 4 cut(s) 158, 340, 614, 717
Bst6I CTCTTC 1 cut(s) 258
BstAFI CTTAAG 1 cut(s) 1370
BstAUI TGTACA 2 cut(s) 614, 1454
BstBI TTCGAA 1 cut(s) 1079
BstC8I GCNNGC 1 cut(s) 941
BstDEI CTNAG 5 cut(s) 263, 328, 377, 789, 1094
BstDSI CCRYGG 1 cut(s) 671
BstEII GGTNACC 1 cut(s) 1007
BstF5I GGATG 3 cut(s) 471, 746, 1414
BstKTI GATC 2 cut(s) 49, 226
BstMAI GTCTC 2 cut(s) 1378, 1470
BstMBI GATC 2 cut(s) 46, 223
BstMWI GCNNNNNNNGC 5 cut(s) 83, 398, 537, 762, 897
BstNI CCWGG 5 cut(s) 360, 1013, 1227, 1263, 1406
BstNSI RCATGY 1 cut(s) 943
BstPI GGTNACC 1 cut(s) 1007
BstSCI CCNGG 5 cut(s) 358, 1011, 1225, 1261, 1404
BstSFI CTRYAG 1 cut(s) 713
BstV1I GCAGC 1 cut(s) 98
BstX2I RGATCY 1 cut(s) 46
BstXI CCANNNNNNTGG 3 cut(s) 411, 1055, 1127
BstYI RGATCY 1 cut(s) 46
BsuRI GGCC 4 cut(s) 58, 163, 681, 1016
BtgI CCRYGG 1 cut(s) 671
BtrI CACGTC 1 cut(s) 1390
BtsCI GGATG 3 cut(s) 471, 746, 1414
BtsIMutI CAGTG 2 cut(s) 66, 1335
BveI ACCTGC 1 cut(s) 80
Cac8I GCNNGC 1 cut(s) 941
Cfr13I GGNCC 4 cut(s) 162, 370, 781, 1202
Csp6I GTAC 4 cut(s) 248, 615, 1266, 1455
CviAII CATG 9 cut(s) 293, 572, 672, 693, 773, 826, 940, 1018, 1300
CviQI GTAC 4 cut(s) 248, 615, 1266, 1455
DdeI CTNAG 5 cut(s) 263, 328, 377, 789, 1094
DpnI GATC 2 cut(s) 48, 225
DpnII GATC 2 cut(s) 46, 223
EaeI YGGCCR 1 cut(s) 1014
Eam1104I CTCTTC 1 cut(s) 258
EarI CTCTTC 1 cut(s) 258
Ecl136II GAGCTC 1 cut(s) 1377
Eco130I CCWWGG 2 cut(s) 637, 671
Eco147I AGGCCT 1 cut(s) 58
Eco24I GRGCYC 2 cut(s) 314, 1379
Eco32I GATATC 1 cut(s) 1053
Eco47I GGWCC 3 cut(s) 370, 781, 1202
Eco53kI GAGCTC 1 cut(s) 1377
Eco57I CTGAAG 1 cut(s) 1139
Eco91I GGTNACC 1 cut(s) 1007
EcoICRI GAGCTC 1 cut(s) 1377
EcoO65I GGTNACC 1 cut(s) 1007
EcoRI GAATTC 3 cut(s) 952, 1062, 1134
EcoRII CCWGG 5 cut(s) 358, 1011, 1225, 1261, 1404
EcoRV GATATC 1 cut(s) 1053
EcoT14I CCWWGG 2 cut(s) 637, 671
EcoT38I GRGCYC 2 cut(s) 314, 1379
ErhI CCWWGG 2 cut(s) 637, 671
FaeI CATG 9 cut(s) 296, 575, 675, 696, 776, 829, 943, 1021, 1303
FatI CATG 9 cut(s) 292, 571, 671, 692, 772, 825, 939, 1017, 1299
Fnu4HI GCNGC 2 cut(s) 87, 815
FokI GGATG 3 cut(s) 478, 733, 1421
FriOI GRGCYC 2 cut(s) 314, 1379
Fsp4HI GCNGC 2 cut(s) 87, 815
FspBI CTAG 3 cut(s) 35, 623, 845
GluI GCNGC 2 cut(s) 87, 815
GsuI CTGGAG 5 cut(s) 258, 387, 537, 609, 1248
HaeIII GGCC 4 cut(s) 58, 163, 681, 1016
HapII CCGG 1 cut(s) 657
Hin1II CATG 9 cut(s) 296, 575, 675, 696, 776, 829, 943, 1021, 1303
HincII GTYRAC 2 cut(s) 193, 634
HindII GTYRAC 2 cut(s) 193, 634
HinfI GANTC 9 cut(s) 121, 131, 289, 415, 991, 1025, 1254, 1305, 1329
HpaII CCGG 1 cut(s) 657
HphI GGTGA 2 cut(s) 92, 308
Hpy166II GTNNAC 5 cut(s) 193, 433, 634, 1193, 1364
Hpy188I TCNGA 4 cut(s) 266, 331, 792, 1158
Hpy8I GTNNAC 5 cut(s) 193, 433, 634, 1193, 1364
HpyAV CCTTC 3 cut(s) 277, 609, 1077
HpyCH4III ACNGT 4 cut(s) 158, 340, 614, 717
HpyCH4IV ACGT 1 cut(s) 1389
HpyCH4V TGCA 6 cut(s) 86, 118, 392, 469, 756, 1470
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 398, 537, 762, 897
HpyF3I CTNAG 5 cut(s) 263, 328, 377, 789, 1094
HpySE526I ACGT 1 cut(s) 1389
Hsp92II CATG 9 cut(s) 296, 575, 675, 696, 776, 829, 943, 1021, 1303
Kpn2I TCCGGA 1 cut(s) 656
Kzo9I GATC 2 cut(s) 46, 223
LmnI GCTCC 6 cut(s) 277, 309, 406, 641, 770, 806
Lsp1109I GCAGC 1 cut(s) 98
LweI GCATC 3 cut(s) 73, 196, 456
MaeI CTAG 3 cut(s) 35, 623, 845
MaeII ACGT 1 cut(s) 1389
MaeIII GTNAC 3 cut(s) 575, 1007, 1255
MalI GATC 2 cut(s) 48, 225
MboI GATC 2 cut(s) 46, 223
MboII GAAGA 3 cut(s) 245, 1000, 1143
MflI RGATCY 1 cut(s) 46
MhlI GDGCHC 2 cut(s) 314, 1379
MlsI TGGCCA 1 cut(s) 1016
MluNI TGGCCA 1 cut(s) 1016
MlyI GAGTC 2 cut(s) 130, 1263
Mox20I TGGCCA 1 cut(s) 1016
MroI TCCGGA 1 cut(s) 656
MroXI GAANNNNTTC 2 cut(s) 30, 1066
MscI TGGCCA 1 cut(s) 1016
MseI TTAA 5 cut(s) 482, 761, 1085, 1164, 1371
MslI CAYNNNNRTG 3 cut(s) 751, 1219, 1298
Msp20I TGGCCA 1 cut(s) 1016
MspCI CTTAAG 1 cut(s) 1370
MspI CCGG 1 cut(s) 657
MspR9I CCNGG 5 cut(s) 360, 1013, 1227, 1263, 1406
Mva1269I GAATGC 1 cut(s) 120
MvaI CCWGG 5 cut(s) 360, 1013, 1227, 1263, 1406
MwoI GCNNNNNNNGC 5 cut(s) 83, 398, 537, 762, 897
NcoI CCATGG 1 cut(s) 671
NdeII GATC 2 cut(s) 46, 223
NlaIII CATG 9 cut(s) 296, 575, 675, 696, 776, 829, 943, 1021, 1303
NlaIV GGNNCC 7 cut(s) 141, 273, 311, 372, 402, 808, 1403
NmuCI GTSAC 1 cut(s) 1255
NspI RCATGY 1 cut(s) 943
NspV TTCGAA 1 cut(s) 1079
PaeI GCATGC 1 cut(s) 943
PaqCI CACCTGC 1 cut(s) 80
PceI AGGCCT 1 cut(s) 58
PctI GAATGC 1 cut(s) 120
PdmI GAANNNNTTC 2 cut(s) 30, 1066
PfeI GAWTC 7 cut(s) 131, 289, 415, 991, 1025, 1305, 1329
PfoI TCCNGGA 1 cut(s) 1404
PkrI GCNGC 2 cut(s) 88, 816
PleI GAGTC 2 cut(s) 129, 1262
PpsI GAGTC 2 cut(s) 129, 1262
PshBI ATTAAT 1 cut(s) 482
Psp124BI GAGCTC 1 cut(s) 1379
Psp6I CCWGG 5 cut(s) 358, 1011, 1225, 1261, 1404
PspEI GGTNACC 1 cut(s) 1007
PspGI CCWGG 5 cut(s) 358, 1011, 1225, 1261, 1404
PspN4I GGNNCC 7 cut(s) 141, 273, 311, 372, 402, 808, 1403
PspPI GGNCC 4 cut(s) 162, 370, 781, 1202
PsuI RGATCY 1 cut(s) 46
RsaI GTAC 4 cut(s) 249, 616, 1267, 1456
RsaNI GTAC 4 cut(s) 248, 615, 1266, 1455
RseI CAYNNNNRTG 3 cut(s) 751, 1219, 1298
SacI GAGCTC 1 cut(s) 1379
SaqAI TTAA 5 cut(s) 482, 761, 1085, 1164, 1371
SatI GCNGC 2 cut(s) 87, 815
Sau3AI GATC 2 cut(s) 46, 223
Sau96I GGNCC 4 cut(s) 162, 370, 781, 1202
SchI GAGTC 2 cut(s) 130, 1263
ScrFI CCNGG 5 cut(s) 360, 1013, 1227, 1263, 1406
SduI GDGCHC 2 cut(s) 314, 1379
SfaNI GCATC 3 cut(s) 73, 196, 456
SfcI CTRYAG 1 cut(s) 713
SfuI TTCGAA 1 cut(s) 1079
SinI GGWCC 3 cut(s) 370, 781, 1202
SmiMI CAYNNNNRTG 3 cut(s) 751, 1219, 1298
SmlI CTYRAG 3 cut(s) 605, 967, 1370
SmoI CTYRAG 3 cut(s) 605, 967, 1370
SphI GCATGC 1 cut(s) 943
SseBI AGGCCT 1 cut(s) 58
SsiI CCGC 2 cut(s) 815, 1200
SspI AATATT 1 cut(s) 31
SspMI CTAG 3 cut(s) 35, 623, 845
SstI GAGCTC 1 cut(s) 1379
StuI AGGCCT 1 cut(s) 58
StyD4I CCNGG 5 cut(s) 358, 1011, 1225, 1261, 1404
StyI CCWWGG 2 cut(s) 637, 671
TaaI ACNGT 4 cut(s) 158, 340, 614, 717
TaiI ACGT 1 cut(s) 1392
TaqI TCGA 3 cut(s) 222, 420, 1079
TatI WGTACW 2 cut(s) 614, 1454
TauI GCSGC 1 cut(s) 817
TfiI GAWTC 7 cut(s) 131, 289, 415, 991, 1025, 1305, 1329
Tru1I TTAA 5 cut(s) 482, 761, 1085, 1164, 1371
Tru9I TTAA 5 cut(s) 482, 761, 1085, 1164, 1371
TscAI CASTG 2 cut(s) 73, 1342
TseFI GTSAC 1 cut(s) 1255
TseI GCWGC 1 cut(s) 86
Tsp45I GTSAC 1 cut(s) 1255
TspDTI ATGAA 8 cut(s) 17, 39, 144, 195, 201, 281, 761, 814
TspGWI ACGGA 1 cut(s) 747
TspRI CASTG 2 cut(s) 73, 1342
Vha464I CTTAAG 1 cut(s) 1370
VpaK11BI GGWCC 3 cut(s) 370, 781, 1202
VspI ATTAAT 1 cut(s) 482
XapI RAATTY 5 cut(s) 493, 509, 952, 1062, 1134
XceI RCATGY 1 cut(s) 943
XcmI CCANNNNNNNNNTGG 1 cut(s) 775
XmnI GAANNNNTTC 2 cut(s) 30, 1066
XspI CTAG 3 cut(s) 35, 623, 845
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.