Rorug07G0106100

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
8318368 .. 8329604
11237 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0106100.1

Sequence Viewer

Length: 1485 bp
ATGGCTCAGTTGAACACCATGTCCGCTTGCTTGCCCACCAACTTCGCCTTTCACGCTCCAAAATCAGAGTTGAATTTATGCCATGATGGAGTTTCATGTCAAAGGAAATTATCGTTTCAAGAGTTGGGGGCAAGAAAGAGTGAGCTTCAGAGGAATGCATTTGCGGGTTTGAGTATCAATGGAGGTGTAACTAGAGCTCGCAACCAAGTTATTAGAGCAGCACTGCCCAGTTACAGTGAGACAGAAATAGCTGGATCTACAAAGGAAAGAGGATTACGTGGCAAATTGAACAAGGTTGTTCTGGCCTATAGTGGTGGCTTAGACACGTCAGTCATTGTCCCATGGCTAAGGGAGAACTATGGTTGTGAAGTTGTTTGCTTCACTGCCGACGTGGGTCAAGGTATAAAAGAATTGGATGGTCTGGAACAGAAGGCCAAGGCAAGTGGGGCTTGTCAGTTAGTAGTGAAGGATCTGAAGGAGGAGTTTGTAAAAGACTATGTATTCCCTTGCTTGCGAGCTGGTGCAATCTATGAGAGGAAATACTTGCTGGGGACCTCAATGGCCCGTCCTGTTATTGCTAAGGCCATGGTAGATGTTGCCAAAGCAGTTGGAGCTGATGCCGTTGCTCATGGATGCACAGGGAAAGGAAATGATCAGGTTCGGTTTGAGCTGACCTTTTTTGCTCTCGACCCCAAACTTAATGTGGTGGCTCCTTGGAGGGAATGGGACATTACGGGTAGAGAAGATGCTATTGAATATGCTAAGAAGCATAATGTGCCTGTCCCAGTGACAAAGAAATCCATATACAGCAGAGATGGGAACTTATGGCACCTTAGTCATGAGGGTGATATTTTGGAAGACCCGGAAAATGAGCCGAAGAAGGATATGTTCATGTTATCTGTCGATCCAGAAGATGCACCGAATGAACCTGAGTATGTAGATATTGGGATCGTTTCAGGAATTCCAGTTTCAGTTGATGGACAAGAGCTTTCACCAGCTTCTTTGCTTACGAAGCTTAATGAGATTGGCGGAAGACACGGAATTGGTCGTGTTGACATGGTTGAAAACCGTCTTGTTGGTATGAAGAGCCGTGGAGTCTATGAAACTCCTGGAGGCACCATCCTATTCGCTGCTGCACGAGAGTTGGAGTCCTTAACTTTGGATCGTGAAACAATGCAAGTTAAAGACTCGCTTGCCCTCAAATATGCAGAGCTAGTCTATGCAGGCAGGTGGTTCGACCCACTTCGTGAGTCCATGGATGCATTCATGGAGAAAATCTCGGAGACAACAACGGGATCAGTAACTCTAAAGTTGTACAAGGGTTTGGTCACTGTAACTAGCCGTAAGAGTCCATATAGCCTGTATAGGCAAGACATCTCTTCATTTGAGAGCGGAGATGTGTATGATCAAGCCGATGCAGCTGGGTTTATTAGGCTATATGGTCTCCCCATGAGGGTGCGGGCAATGCTTAAGGAGGGGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

494

Amino Acids

54.37

Weight (kDa)

5.95

Isoelectric Point (pI)

31.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arginosuc_synth PF00764 98 - 260 1.4e-68 Arginosuccinate synthase N-terminal HUP domain
Arginosuc_syn_C PF20979 269 - 486 2.2e-81 Arginosuccinate synthase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1218
AasI GACNNNNNNGTC 1 cut(s) 329
Acc36I ACCTGC 1 cut(s) 1218
AccB1I GGYRCC 2 cut(s) 828, 1115
AccBSI CCGCTC 1 cut(s) 1392
AciI CCGC 5 cut(s) 24, 164, 1029, 1392, 1459
AclWI GGATC 6 cut(s) 262, 477, 899, 956, 1170, 1303
AcsI RAATTY 2 cut(s) 73, 960
AcuI CTGAAG 2 cut(s) 131, 494
AdeI CACNNNGTG 1 cut(s) 1247
AfaI GTAC 1 cut(s) 1316
AfiI CCNNNNNNNGG 1 cut(s) 1453
AflII CTTAAG 1 cut(s) 1469
AflIII ACRYGT 1 cut(s) 324
AgsI TTSAA 6 cut(s) 13, 73, 119, 289, 755, 1064
AjiI CACGTC 2 cut(s) 327, 391
AjnI CCWGG 1 cut(s) 1108
AloI GAACNNNNNNTCC 1 cut(s) 37
Alw21I GWGCWC 1 cut(s) 199
Alw26I GTCTC 3 cut(s) 233, 1277, 1448
AlwI GGATC 6 cut(s) 262, 477, 899, 956, 1170, 1303
AoxI GGCC 4 cut(s) 303, 432, 561, 582
ApeKI GCWGC 4 cut(s) 218, 1130, 1133, 1418
ApoI RAATTY 2 cut(s) 73, 960
AspS9I GGNCC 2 cut(s) 552, 562
AsuC2I CCSGG 1 cut(s) 863
AsuHPI GGTGA 2 cut(s) 857, 984
AvaII GGWCC 1 cut(s) 552
BanI GGYRCC 2 cut(s) 828, 1115
BanII GRGCYC 1 cut(s) 199
BauI CACGAG 1 cut(s) 1137
BbsI GAAGAC 2 cut(s) 864, 1039
Bbv12I GWGCWC 1 cut(s) 199
BbvI GCAGC 4 cut(s) 230, 1117, 1120, 1430
BccI CCATC 5 cut(s) 80, 410, 809, 971, 1127
BceAI ACGGC 3 cut(s) 605, 1074, 1326
BcgI CGANNNNNNTGC 2 cut(s) 1216, 1250
BciT130I CCWGG 1 cut(s) 1110
BclI TGATCA 2 cut(s) 652, 1405
BcnI CCSGG 1 cut(s) 863
BcoDI GTCTC 3 cut(s) 233, 1277, 1448
BfaI CTAG 4 cut(s) 192, 1214, 1338, 1483
BfmI CTRYAG 1 cut(s) 307
BfrI CTTAAG 1 cut(s) 1469
BfuAI ACCTGC 1 cut(s) 1218
BisI GCNGC 4 cut(s) 219, 1131, 1134, 1419
BlsI GCNGC 4 cut(s) 220, 1132, 1135, 1420
Bme1390I CCNGG 2 cut(s) 863, 1110
Bme18I GGWCC 1 cut(s) 552
BmgBI CACGTC 2 cut(s) 327, 391
BmgT120I GGNCC 2 cut(s) 552, 562
BmiI GGNNCC 4 cut(s) 553, 711, 830, 1117
BmrFI CCNGG 2 cut(s) 863, 1110
BmrI ACTGGG 2 cut(s) 222, 779
BmsI GCATC 6 cut(s) 607, 623, 736, 904, 1249, 1405
BmuI ACTGGG 2 cut(s) 222, 779
BoxI GACNNNNGTC 1 cut(s) 393
BpiI GAAGAC 2 cut(s) 864, 1039
BplI GAGNNNNNCTC 2 cut(s) 1262, 1294
BpmI CTGGAG 1 cut(s) 1131
Bpu10I CCTNAGC 2 cut(s) 347, 579
BpuMI CCSGG 1 cut(s) 863
BsaAI YACGTR 1 cut(s) 278
BsaI GGTCTC 1 cut(s) 1448
BsaJI CCNNGG 6 cut(s) 341, 435, 585, 713, 1090, 1254
Bsc4I CCNNNNNNNGG 1 cut(s) 1453
Bse1I ACTGG 3 cut(s) 228, 785, 965
Bse3DI GCAATG 1 cut(s) 1470
BseBI CCWGG 1 cut(s) 1110
BseDI CCNNGG 6 cut(s) 341, 435, 585, 713, 1090, 1254
BseGI GGATG 4 cut(s) 421, 638, 1119, 1264
BseLI CCNNNNNNNGG 1 cut(s) 1453
BseMI GCAATG 1 cut(s) 1470
BseMII CTCAG 2 cut(s) 20, 921
BseNI ACTGG 3 cut(s) 228, 785, 965
BseRI GAGGAG 1 cut(s) 494
BseXI GCAGC 4 cut(s) 230, 1117, 1120, 1430
BseYI CCCAGC 2 cut(s) 547, 1421
BsgI GTGCAG 1 cut(s) 1119
BshFI GGCC 4 cut(s) 305, 434, 563, 584
BshNI GGYRCC 2 cut(s) 828, 1115
BsiHKAI GWGCWC 1 cut(s) 199
BsiSI CCGG 1 cut(s) 863
BslFI GGGAC 4 cut(s) 323, 565, 740, 767
BslI CCNNNNNNNGG 1 cut(s) 1453
BsmAI GTCTC 3 cut(s) 233, 1277, 1448
BsmFI GGGAC 4 cut(s) 323, 565, 740, 767
BsmI GAATGC 2 cut(s) 160, 1262
BsnI GGCC 4 cut(s) 305, 434, 563, 584
Bso31I GGTCTC 1 cut(s) 1448
Bsp1286I GDGCHC 1 cut(s) 199
Bsp1407I TGTACA 1 cut(s) 1314
Bsp143I GATC 9 cut(s) 254, 469, 652, 904, 948, 1162, 1295, 1405, 1479
Bsp19I CCATGG 3 cut(s) 341, 585, 1254
BspACI CCGC 5 cut(s) 24, 164, 1029, 1392, 1459
BspANI GGCC 4 cut(s) 305, 434, 563, 584
BspCNI CTCAG 2 cut(s) 19, 922
BspHI TCATGA 1 cut(s) 838
BspLI GGNNCC 4 cut(s) 553, 711, 830, 1117
BspMI ACCTGC 1 cut(s) 1218
BspPI GGATC 6 cut(s) 262, 477, 899, 956, 1170, 1303
BspQI GCTCTTC 1 cut(s) 1079
BspT107I GGYRCC 2 cut(s) 828, 1115
BspTI CTTAAG 1 cut(s) 1469
BspTNI GGTCTC 1 cut(s) 1448
BsrBI CCGCTC 1 cut(s) 1392
BsrDI GCAATG 1 cut(s) 1470
BsrGI TGTACA 1 cut(s) 1314
BsrI ACTGG 3 cut(s) 228, 785, 965
BssECI CCNNGG 6 cut(s) 341, 435, 585, 713, 1090, 1254
BssMI GATC 9 cut(s) 254, 469, 652, 904, 948, 1162, 1295, 1405, 1479
BssSI CACGAG 1 cut(s) 1137
BssT1I CCWWGG 5 cut(s) 341, 435, 585, 713, 1254
Bst2BI CACGAG 1 cut(s) 1137
Bst2UI CCWGG 1 cut(s) 1110
Bst4CI ACNGT 3 cut(s) 236, 1070, 1333
Bst6I CTCTTC 2 cut(s) 1079, 1384
BstAFI CTTAAG 1 cut(s) 1469
BstAPI GCANNNNNTGC 1 cut(s) 775
BstAUI TGTACA 1 cut(s) 1314
BstBAI YACGTR 1 cut(s) 278
BstC8I GCNNGC 8 cut(s) 28, 32, 199, 512, 516, 1194, 1225, 1461
BstDEI CTNAG 7 cut(s) 6, 319, 347, 579, 762, 833, 930
BstDSI CCRYGG 4 cut(s) 341, 585, 1090, 1254
BstF5I GGATG 4 cut(s) 421, 638, 1119, 1264
BstKTI GATC 9 cut(s) 257, 472, 655, 907, 951, 1165, 1298, 1408, 1482
BstMAI GTCTC 3 cut(s) 233, 1277, 1448
BstMBI GATC 9 cut(s) 254, 469, 652, 904, 948, 1162, 1295, 1405, 1479
BstMWI GCNNNNNNNGC 7 cut(s) 53, 446, 611, 775, 1012, 1418, 1465
BstNI CCWGG 1 cut(s) 1110
BstPAI GACNNNNGTC 1 cut(s) 393
BstSCI CCNGG 2 cut(s) 861, 1108
BstSFI CTRYAG 1 cut(s) 307
BstV1I GCAGC 4 cut(s) 230, 1117, 1120, 1430
BstV2I GAAGAC 2 cut(s) 864, 1039
BstX2I RGATCY 3 cut(s) 254, 469, 1479
BstYI RGATCY 3 cut(s) 254, 469, 1479
BsuRI GGCC 4 cut(s) 305, 434, 563, 584
BtgI CCRYGG 4 cut(s) 341, 585, 1090, 1254
BtrI CACGTC 2 cut(s) 327, 391
BtsCI GGATG 4 cut(s) 421, 638, 1119, 1264
BtsI GCAGTG 2 cut(s) 221, 381
BtsIMutI CAGTG 5 cut(s) 221, 241, 381, 792, 1329
BveI ACCTGC 1 cut(s) 1218
Cac8I GCNNGC 8 cut(s) 28, 32, 199, 512, 516, 1194, 1225, 1461
CciI TCATGA 1 cut(s) 838
Cfr13I GGNCC 2 cut(s) 552, 562
Csp6I GTAC 1 cut(s) 1315
CspCI CAANNNNNGTGG 2 cut(s) 424, 459
CviQI GTAC 1 cut(s) 1315
DdeI CTNAG 7 cut(s) 6, 319, 347, 579, 762, 833, 930
DpnI GATC 9 cut(s) 256, 471, 654, 906, 950, 1164, 1297, 1407, 1481
DpnII GATC 9 cut(s) 254, 469, 652, 904, 948, 1162, 1295, 1405, 1479
DraIII CACNNNGTG 1 cut(s) 1247
DrdI GACNNNNNNGTC 1 cut(s) 329
DseDI GACNNNNNNGTC 1 cut(s) 329
Eam1104I CTCTTC 2 cut(s) 1079, 1384
EarI CTCTTC 2 cut(s) 1079, 1384
EciI GGCGGA 1 cut(s) 1044
Ecl136II GAGCTC 1 cut(s) 197
Eco130I CCWWGG 5 cut(s) 341, 435, 585, 713, 1254
Eco24I GRGCYC 1 cut(s) 199
Eco31I GGTCTC 1 cut(s) 1448
Eco47I GGWCC 1 cut(s) 552
Eco53kI GAGCTC 1 cut(s) 197
Eco57I CTGAAG 2 cut(s) 131, 494
EcoICRI GAGCTC 1 cut(s) 197
EcoO109I RGGNCCY 1 cut(s) 552
EcoRI GAATTC 1 cut(s) 960
EcoRII CCWGG 1 cut(s) 1108
EcoT14I CCWWGG 5 cut(s) 341, 435, 585, 713, 1254
EcoT22I ATGCAT 2 cut(s) 160, 1264
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 5 cut(s) 341, 435, 585, 713, 1254
FalI AAGNNNNNCTT 4 cut(s) 433, 465, 1176, 1208
FaqI GGGAC 4 cut(s) 323, 565, 740, 767
FauI CCCGC 2 cut(s) 157, 1452
FbaI TGATCA 2 cut(s) 652, 1405
Fnu4HI GCNGC 4 cut(s) 219, 1131, 1134, 1419
FokI GGATG 4 cut(s) 428, 645, 1106, 1271
FriOI GRGCYC 1 cut(s) 199
Fsp4HI GCNGC 4 cut(s) 219, 1131, 1134, 1419
FspBI CTAG 4 cut(s) 192, 1214, 1338, 1483
GluI GCNGC 4 cut(s) 219, 1131, 1134, 1419
GsaI CCCAGC 2 cut(s) 551, 1425
GsuI CTGGAG 1 cut(s) 1131
HaeIII GGCC 4 cut(s) 305, 434, 563, 584
HapII CCGG 1 cut(s) 863
HincII GTYRAC 1 cut(s) 1054
HindII GTYRAC 1 cut(s) 1054
HindIII AAGCTT 1 cut(s) 1013
HinfI GANTC 5 cut(s) 1095, 1148, 1187, 1250, 1348
HpaII CCGG 1 cut(s) 863
HphI GGTGA 2 cut(s) 857, 984
Hpy166II GTNNAC 1 cut(s) 1054
Hpy188I TCNGA 4 cut(s) 67, 150, 474, 1282
Hpy188III TCNNGA 8 cut(s) 119, 422, 686, 839, 908, 957, 1166, 1247
Hpy8I GTNNAC 1 cut(s) 1054
Hpy99I CGWCG 1 cut(s) 392
HpyAV CCTTC 4 cut(s) 424, 460, 469, 874
HpyCH4III ACNGT 3 cut(s) 236, 1070, 1333
HpyCH4IV ACGT 3 cut(s) 277, 326, 390
HpyF10VI GCNNNNNNNGC 7 cut(s) 53, 446, 611, 775, 1012, 1418, 1465
HpyF3I CTNAG 7 cut(s) 6, 319, 347, 579, 762, 833, 930
HpySE526I ACGT 3 cut(s) 277, 326, 390
Ksp22I TGATCA 2 cut(s) 652, 1405
Kzo9I GATC 9 cut(s) 254, 469, 652, 904, 948, 1162, 1295, 1405, 1479
LguI GCTCTTC 1 cut(s) 1079
LmnI GCTCC 3 cut(s) 61, 611, 715
Lsp1109I GCAGC 4 cut(s) 230, 1117, 1120, 1430
LweI GCATC 6 cut(s) 607, 623, 736, 904, 1249, 1405
MaeI CTAG 4 cut(s) 192, 1214, 1338, 1483
MaeII ACGT 3 cut(s) 277, 326, 390
MaeIII GTNAC 6 cut(s) 187, 230, 787, 1300, 1327, 1333
MalI GATC 9 cut(s) 256, 471, 654, 906, 950, 1164, 1297, 1407, 1481
MbiI CCGCTC 1 cut(s) 1392
MboI GATC 9 cut(s) 254, 469, 652, 904, 948, 1162, 1295, 1405, 1479
MboII GAAGA 7 cut(s) 755, 869, 889, 923, 1044, 1096, 1371
MflI RGATCY 3 cut(s) 254, 469, 1479
MhlI GDGCHC 1 cut(s) 199
MluCI AATT 6 cut(s) 73, 107, 284, 410, 960, 1041
MlyI GAGTC 5 cut(s) 1104, 1157, 1181, 1259, 1357
MmeI TCCRAC 2 cut(s) 589, 1125
Mph1103I ATGCAT 2 cut(s) 160, 1264
MseI TTAA 5 cut(s) 699, 1017, 1154, 1182, 1470
MslI CAYNNNNRTG 2 cut(s) 843, 1454
MspA1I CMGCKG 1 cut(s) 1421
MspCI CTTAAG 1 cut(s) 1469
MspI CCGG 1 cut(s) 863
MspR9I CCNGG 2 cut(s) 863, 1110
Mva1269I GAATGC 2 cut(s) 160, 1262
MvaI CCWGG 1 cut(s) 1110
MwoI GCNNNNNNNGC 7 cut(s) 53, 446, 611, 775, 1012, 1418, 1465
NciI CCSGG 1 cut(s) 863
NcoI CCATGG 3 cut(s) 341, 585, 1254
NdeII GATC 9 cut(s) 254, 469, 652, 904, 948, 1162, 1295, 1405, 1479
NlaIV GGNNCC 4 cut(s) 553, 711, 830, 1117
NmuCI GTSAC 2 cut(s) 787, 1327
NsiI ATGCAT 2 cut(s) 160, 1264
PagI TCATGA 1 cut(s) 838
PaqCI CACCTGC 1 cut(s) 1218
PciSI GCTCTTC 1 cut(s) 1079
PctI GAATGC 2 cut(s) 160, 1262
PfoI TCCNGGA 1 cut(s) 1108
PkrI GCNGC 4 cut(s) 220, 1132, 1135, 1420
PleI GAGTC 5 cut(s) 1103, 1156, 1181, 1258, 1356
PpsI GAGTC 5 cut(s) 1103, 1156, 1181, 1258, 1356
Ppu21I YACGTR 1 cut(s) 278
PpuMI RGGWCCY 1 cut(s) 552
PshAI GACNNNNGTC 1 cut(s) 393
Psp124BI GAGCTC 1 cut(s) 199
Psp5II RGGWCCY 1 cut(s) 552
Psp6I CCWGG 1 cut(s) 1108
PspFI CCCAGC 2 cut(s) 547, 1421
PspGI CCWGG 1 cut(s) 1108
PspN4I GGNNCC 4 cut(s) 553, 711, 830, 1117
PspPI GGNCC 2 cut(s) 552, 562
PspPPI RGGWCCY 1 cut(s) 552
PsuI RGATCY 3 cut(s) 254, 469, 1479
PvuII CAGCTG 1 cut(s) 1421
RsaI GTAC 1 cut(s) 1316
RsaNI GTAC 1 cut(s) 1315
RseI CAYNNNNRTG 2 cut(s) 843, 1454
SacI GAGCTC 1 cut(s) 199
SapI GCTCTTC 1 cut(s) 1079
SaqAI TTAA 5 cut(s) 699, 1017, 1154, 1182, 1470
SatI GCNGC 4 cut(s) 219, 1131, 1134, 1419
Sau3AI GATC 9 cut(s) 254, 469, 652, 904, 948, 1162, 1295, 1405, 1479
Sau96I GGNCC 2 cut(s) 552, 562
SchI GAGTC 5 cut(s) 1104, 1157, 1181, 1259, 1357
ScrFI CCNGG 2 cut(s) 863, 1110
SduI GDGCHC 1 cut(s) 199
SfaNI GCATC 6 cut(s) 607, 623, 736, 904, 1249, 1405
SfcI CTRYAG 1 cut(s) 307
SinI GGWCC 1 cut(s) 552
SmiMI CAYNNNNRTG 2 cut(s) 843, 1454
SmlI CTYRAG 1 cut(s) 1469
SmoI CTYRAG 1 cut(s) 1469
Sse9I AATT 6 cut(s) 73, 107, 284, 410, 960, 1041
SsiI CCGC 5 cut(s) 24, 164, 1029, 1392, 1459
SspMI CTAG 4 cut(s) 192, 1214, 1338, 1483
SstI GAGCTC 1 cut(s) 199
StyD4I CCNGG 2 cut(s) 861, 1108
StyI CCWWGG 5 cut(s) 341, 435, 585, 713, 1254
TaaI ACNGT 3 cut(s) 236, 1070, 1333
TaiI ACGT 3 cut(s) 280, 329, 393
TaqI TCGA 3 cut(s) 687, 903, 1236
TasI AATT 6 cut(s) 73, 107, 284, 410, 960, 1041
TatI WGTACW 1 cut(s) 1314
Tru1I TTAA 5 cut(s) 699, 1017, 1154, 1182, 1470
Tru9I TTAA 5 cut(s) 699, 1017, 1154, 1182, 1470
TscAI CASTG 5 cut(s) 228, 241, 388, 792, 1336
TseFI GTSAC 2 cut(s) 787, 1327
TseI GCWGC 4 cut(s) 218, 1130, 1133, 1418
Tsp45I GTSAC 2 cut(s) 787, 1327
TspDTI ATGAA 7 cut(s) 84, 880, 939, 1097, 1116, 1255, 1371
TspGWI ACGGA 1 cut(s) 1053
TspRI CASTG 5 cut(s) 228, 241, 388, 792, 1336
Vha464I CTTAAG 1 cut(s) 1469
VpaK11BI GGWCC 1 cut(s) 552
XapI RAATTY 2 cut(s) 73, 960
XcmI CCANNNNNNNNNTGG 1 cut(s) 700
XspI CTAG 4 cut(s) 192, 1214, 1338, 1483
Zsp2I ATGCAT 2 cut(s) 160, 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.