Rroxscaffold_3G00251870

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
45880894 .. 45883742
2849 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00251870.1

Sequence Viewer

Length: 2724 bp
ATGAGTAGTGGGTCTATGCATTCTGGTTTGGTTGGGCTTGTGTGCCTGGCCATTGCCTCTACTATTTGTTGTTCAAGTGTTGGAAGCTCCAACAACATCATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGACTCCAATGCTCTTGCCTCTTGGAAAAGTGAGGAGAAAGATTGCTGCAAGTGGAGAGGAATAGAATGCAACAACCAAACAGGTCATGTTACCAGTCTTGATTTCTCCTTTAATTATGATCCATATCTCTATTCTGTTGAAGTTCCTTTCAGTGGTGAAATTAGTCCTTCACTACTTGAATTGCGATATCTAAATTACTTGGACCTCAGTTATAGTGATTTTGGAGCAAAAATGATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGCAGATGCTAATTTCAGCGGACCTGTTCCTCCCCAACTTAGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTATGAGTCAATTGAAAGAGCTCAAACTTGCAAATGCTAATTTCAGTGGACATGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTACAACTATGATGTTCGTTTAGAAAATCTTGAGTTGTTATCTCATCTTTCTTCCTTGAGATACCCGAACATGTCACGGCTGAATTTGTCCGAGACCGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTCAATTACAGAGCTTCGTTATCTTCCCAACAACTTTGTCCATATTCATCTCTCTTTCAACAATCTTGAAGGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTAGATCTGTCATGGAATCAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTATGGCACAACCAATTGTCCGAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACTCACTTGAGACCTTGGACTTGGGTTTTAACCAATTTTGGGGGTACTGGCCAGATTTGAAACGTTTTTCAAAGTTAAGAGTGTTATATCTTGACTGGAATCAACTAAATGGGTCTGTACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGAAACATTATATCTCTCTAGGAATTCTTTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTACAGGATTTGAGTCTTTCTGATAATCGTTTCTCTATCAACCTGAGCTCTAATTGGAGGCCACCATTTCAACTTACTAGTATGTTAGATATGTCCTCTTGCAAGGTGGGCCCAGCTTTTCCCAAGTGGATTCTAACGCAGACAAATCTTACTCAGCTTTCTCTCTCTAATGCTGGACTATCAGGAAAACTACCAAATCTGTCATCGACAAGCTTGCGTTATGTTAACTTGTCTTCTAATCTATTTTCTGGCGCATTGCCATCATTTTCTCCTATGCTACAAAACCTGTATCTCTCGAATAATAGGTTTTCAGGACCTTTGTCTTCCTTCTGTGCAACGCAGGCTCCACATTTAAGTTATCTTGACATTTCTAATAACCTATTATCTGGGGAGCTTCCTAATTGTTGGATACAATTCTTGAAATTGCAAATGTTGGATTTGGGAAAGAATAAATTATCGGGAAAAATACCAAGCTCGTTAGGCAATCTACATGGAATTTTGATTTTGCGTTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCGAATTATTGATGGTTGACCTTGGCAACAATAAGTTGTCGGGAAAGATACCAACATGGATTGGCCAAAGCCTAACAGACTTGGTGATTCTACGCTTACGGTCCAATGAGTTCAATGGAATCATACCCTTCTCACTGTGTAATCTAGCCACCATTCATGTCTTGGACCTCTCTCACAACAATATTTCAGGAGGCTTGCCACATTGCTTCGATAACATAACAGCTTTGGCTGATGATATAGATTACGGTTTTATTGTGGAACTTGTGTGGAAAGGAATAGAAATTGAGTTTCCCAATATTACAGGTTTGAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGAAAATTCCGCAAAGCATAGCAAATATGACACAGTTGATTTCTCTGAACCTATCAAGAAACAATTTGATGGGAAAGCTTCCTGAAAACTTTGGTAACTTGAAGATGTTAGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTAAAATTCCTGCAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCATACAACAACTTGTCAGGAAGAATTCCAACTAGCACTCAACTTCAAAGTTTTGATGCTTCTAAATATATGGGAAATCATGGACTTTGTGGACCACCGCTGACACCAAATTGCTCACGAGATGGAGCAACTCAAGCTGATGATAACAAAGAACATGATAAAGATGGTCTCATAAGCCTGGGATTCTTTATCAGTGTAGTGCTGGGATTTGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTAAGACTTCTTATAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATTTTTGTCAAAACTTCTGTGTACAAGGCAGAGGTGCGGAGGACACATCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

907

Amino Acids

100.9

Weight (kDa)

5.88

Isoelectric Point (pI)

39.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 76 2.8e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 105 - 271 7.6e-15 Leucine-rich repeat region
LRR_8 PF13855 277 - 333 2.9e-07 Leucine rich repeat
LRR_8 PF13855 350 - 408 4.5e-06 Leucine rich repeat
LRR_8 PF13855 373 - 433 6.5e-08 Leucine rich repeat
LRR_14 PF23598 727 - 805 5.5e-07 Leucine-rich repeat region
LRR_8 PF13855 750 - 793 4.5e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 456, 2177, 2462, 2598, 2704
AclI AACGTT 1 cut(s) 1108
AclWI GGATC 1 cut(s) 269
AcoI YGGCCR 4 cut(s) 48, 764, 1094, 1888
AcsI RAATTY 7 cut(s) 545, 742, 1216, 1761, 2172, 2316, 2388
AfaI GTAC 4 cut(s) 1091, 1164, 1825, 2690
AfiI CCNNNNNNNGG 4 cut(s) 308, 623, 762, 1084
AflII CTTAAG 1 cut(s) 2612
AflIII ACRYGT 2 cut(s) 607, 729
AhlI ACTAGT 1 cut(s) 1343
AjnI CCWGG 3 cut(s) 45, 2541, 2646
Alw21I GWGCWC 2 cut(s) 579, 1316
Alw26I GTCTC 3 cut(s) 746, 1049, 2537
AlwI GGATC 1 cut(s) 269
Ama87I CYCGRG 1 cut(s) 1166
AoxI GGCC 7 cut(s) 48, 145, 764, 1094, 1325, 1375, 1888
ApaI GGGCCC 1 cut(s) 1379
ApeKI GCWGC 2 cut(s) 201, 963
ApoI RAATTY 7 cut(s) 545, 742, 1216, 1761, 2172, 2316, 2388
AspLEI GCGC 1 cut(s) 1520
AspS9I GGNCC 9 cut(s) 358, 458, 860, 1375, 1376, 1580, 1926, 1990, 2456
AsuHPI GGTGA 2 cut(s) 323, 1921
AvaI CYCGRG 1 cut(s) 1166
AvaII GGWCC 7 cut(s) 358, 458, 860, 1580, 1926, 1990, 2456
BaeGI GKGCMC 1 cut(s) 1379
BalI TGGCCA 4 cut(s) 50, 766, 1096, 1890
BanII GRGCYC 3 cut(s) 579, 1316, 1379
BarI GAAGNNNNNNTAC 2 cut(s) 921, 953
BauI CACGAG 1 cut(s) 2481
BbsI GAAGAC 3 cut(s) 868, 1491, 1581
Bbv12I GWGCWC 2 cut(s) 579, 1316
BbvI GCAGC 2 cut(s) 188, 975
BccI CCATC 7 cut(s) 872, 1534, 1831, 2230, 2480, 2522, 2584
BceAI ACGGC 1 cut(s) 752
BcgI CGANNNNNNTGC 2 cut(s) 1462, 1496
BciT130I CCWGG 3 cut(s) 47, 2543, 2648
BciVI GTATCC 2 cut(s) 930, 1668
BcoDI GTCTC 3 cut(s) 746, 1049, 2537
BcuI ACTAGT 1 cut(s) 1343
BfaI CTAG 7 cut(s) 896, 905, 1188, 1212, 1344, 1970, 2397
BfrI CTTAAG 1 cut(s) 2612
BfuI GTATCC 2 cut(s) 930, 1668
BglII AGATCT 1 cut(s) 907
BisI GCNGC 3 cut(s) 202, 964, 2599
BlsI GCNGC 3 cut(s) 203, 965, 2600
Bme1390I CCNGG 3 cut(s) 47, 2543, 2648
Bme18I GGWCC 7 cut(s) 358, 458, 860, 1580, 1926, 1990, 2456
BmeT110I CYCGRG 1 cut(s) 1166
BmgT120I GGNCC 9 cut(s) 358, 458, 860, 1375, 1376, 1580, 1926, 1990, 2456
BmiI GGNNCC 3 cut(s) 862, 1377, 1611
BmrFI CCNGG 3 cut(s) 47, 2543, 2648
BmsI GCATC 2 cut(s) 433, 2410
BoxI GACNNNNGTC 1 cut(s) 1585
BpiI GAAGAC 3 cut(s) 868, 1491, 1581
BpmI CTGGAG 1 cut(s) 116
Bpu10I CCTNAGC 1 cut(s) 1310
BpuEI CTTGAG 4 cut(s) 710, 736, 1073, 2481
BsaBI GATNNNNATC 1 cut(s) 279
BsaI GGTCTC 3 cut(s) 746, 1049, 2537
BsaJI CCNNGG 3 cut(s) 1059, 1846, 2542
BsaXI ACNNNNNCTCC 2 cut(s) 1594, 1624
Bsc4I CCNNNNNNNGG 4 cut(s) 308, 623, 762, 1084
Bse1I ACTGG 5 cut(s) 133, 249, 1097, 1145, 2584
Bse3DI GCAATG 3 cut(s) 51, 1520, 2026
Bse8I GATNNNNATC 1 cut(s) 279
BseBI CCWGG 3 cut(s) 47, 2543, 2648
BseDI CCNNGG 3 cut(s) 1059, 1846, 2542
BseGI GGATG 3 cut(s) 160, 864, 2595
BseJI GATNNNNATC 1 cut(s) 279
BseLI CCNNNNNNNGG 4 cut(s) 308, 623, 762, 1084
BseMI GCAATG 3 cut(s) 51, 1520, 2026
BseMII CTCAG 4 cut(s) 376, 1032, 1301, 1433
BseNI ACTGG 5 cut(s) 133, 249, 1097, 1145, 2584
BseRI GAGGAG 1 cut(s) 203
BseSI GKGCMC 1 cut(s) 1379
BseXI GCAGC 2 cut(s) 188, 975
BseYI CCCAGC 2 cut(s) 1378, 2566
BshFI GGCC 7 cut(s) 50, 147, 766, 1096, 1327, 1377, 1890
BsiHKAI GWGCWC 2 cut(s) 579, 1316
BsiHKCI CYCGRG 1 cut(s) 1166
BslFI GGGAC 1 cut(s) 846
BslI CCNNNNNNNGG 4 cut(s) 308, 623, 762, 1084
BsmAI GTCTC 3 cut(s) 746, 1049, 2537
BsmFI GGGAC 1 cut(s) 846
BsmI GAATGC 2 cut(s) 19, 227
BsnI GGCC 7 cut(s) 50, 147, 766, 1096, 1327, 1377, 1890
Bso31I GGTCTC 3 cut(s) 746, 1049, 2537
BsoBI CYCGRG 1 cut(s) 1166
Bsp120I GGGCCC 1 cut(s) 1375
Bsp1286I GDGCHC 3 cut(s) 579, 1316, 1379
Bsp1407I TGTACA 1 cut(s) 2688
Bsp143I GATC 4 cut(s) 274, 505, 652, 907
BspACI CCGC 5 cut(s) 456, 2177, 2462, 2598, 2704
BspANI GGCC 7 cut(s) 50, 147, 766, 1096, 1327, 1377, 1890
BspCNI CTCAG 4 cut(s) 375, 1033, 1302, 1432
BspLI GGNNCC 3 cut(s) 862, 1377, 1611
BspPI GGATC 1 cut(s) 269
BspQI GCTCTTC 1 cut(s) 132
BspTI CTTAAG 1 cut(s) 2612
BspTNI GGTCTC 3 cut(s) 746, 1049, 2537
BsrDI GCAATG 3 cut(s) 51, 1520, 2026
BsrGI TGTACA 1 cut(s) 2688
BsrI ACTGG 5 cut(s) 133, 249, 1097, 1145, 2584
BssECI CCNNGG 3 cut(s) 1059, 1846, 2542
BssMI GATC 4 cut(s) 274, 505, 652, 907
BssSI CACGAG 1 cut(s) 2481
BssT1I CCWWGG 2 cut(s) 1059, 1846
Bst2BI CACGAG 1 cut(s) 2481
Bst2UI CCWGG 3 cut(s) 47, 2543, 2648
Bst4CI ACNGT 6 cut(s) 757, 1823, 1926, 1962, 2072, 2202
Bst6I CTCTTC 1 cut(s) 132
BstAFI CTTAAG 1 cut(s) 2612
BstAPI GCANNNNNTGC 1 cut(s) 2330
BstAUI TGTACA 1 cut(s) 2688
BstC8I GCNNGC 7 cut(s) 123, 782, 887, 1481, 1608, 2021, 2335
BstDEI CTNAG 7 cut(s) 362, 476, 967, 1041, 1310, 1419, 2348
BstF5I GGATG 3 cut(s) 160, 864, 2595
BstHHI GCGC 1 cut(s) 1520
BstKTI GATC 4 cut(s) 277, 508, 655, 910
BstMAI GTCTC 3 cut(s) 746, 1049, 2537
BstMBI GATC 4 cut(s) 274, 505, 652, 907
BstMWI GCNNNNNNNGC 5 cut(s) 1374, 1607, 1746, 2330, 2498
BstNI CCWGG 3 cut(s) 47, 2543, 2648
BstNSI RCATGY 4 cut(s) 125, 611, 733, 889
BstPAI GACNNNNGTC 1 cut(s) 1585
BstSCI CCNGG 3 cut(s) 45, 2541, 2646
BstSLI GKGCMC 1 cut(s) 1379
BstV1I GCAGC 2 cut(s) 188, 975
BstV2I GAAGAC 3 cut(s) 868, 1491, 1581
BstX2I RGATCY 1 cut(s) 907
BstXI CCANNNNNNTGG 1 cut(s) 2309
BstYI RGATCY 1 cut(s) 907
BsuI GTATCC 2 cut(s) 930, 1668
BsuRI GGCC 7 cut(s) 50, 147, 766, 1096, 1327, 1377, 1890
BtsCI GGATG 3 cut(s) 160, 864, 2595
BtsIMutI CAGTG 5 cut(s) 313, 607, 1958, 2563, 2577
Cac8I GCNNGC 7 cut(s) 123, 782, 887, 1481, 1608, 2021, 2335
CfoI GCGC 1 cut(s) 1520
Cfr13I GGNCC 9 cut(s) 358, 458, 860, 1375, 1376, 1580, 1926, 1990, 2456
Csp6I GTAC 4 cut(s) 1090, 1163, 1824, 2689
CviQI GTAC 4 cut(s) 1090, 1163, 1824, 2689
DdeI CTNAG 7 cut(s) 362, 476, 967, 1041, 1310, 1419, 2348
DpnI GATC 4 cut(s) 276, 507, 654, 909
DpnII GATC 4 cut(s) 274, 505, 652, 907
EaeI YGGCCR 4 cut(s) 48, 764, 1094, 1888
Eam1104I CTCTTC 1 cut(s) 132
EarI CTCTTC 1 cut(s) 132
Ecl136II GAGCTC 2 cut(s) 577, 1314
Eco130I CCWWGG 2 cut(s) 1059, 1846
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 3 cut(s) 579, 1316, 1379
Eco31I GGTCTC 3 cut(s) 746, 1049, 2537
Eco32I GATATC 2 cut(s) 344, 2307
Eco47I GGWCC 7 cut(s) 358, 458, 860, 1580, 1926, 1990, 2456
Eco53kI GAGCTC 2 cut(s) 577, 1314
Eco88I CYCGRG 1 cut(s) 1166
EcoICRI GAGCTC 2 cut(s) 577, 1314
EcoO109I RGGNCCY 2 cut(s) 860, 1580
EcoRI GAATTC 2 cut(s) 1216, 2388
EcoRII CCWGG 3 cut(s) 45, 2541, 2646
EcoRV GATATC 2 cut(s) 344, 2307
EcoT14I CCWWGG 2 cut(s) 1059, 1846
EcoT22I ATGCAT 1 cut(s) 21
EcoT38I GRGCYC 3 cut(s) 579, 1316, 1379
ErhI CCWWGG 2 cut(s) 1059, 1846
FaqI GGGAC 1 cut(s) 846
Fnu4HI GCNGC 3 cut(s) 202, 964, 2599
FokI GGATG 3 cut(s) 167, 851, 2602
FriOI GRGCYC 3 cut(s) 579, 1316, 1379
Fsp4HI GCNGC 3 cut(s) 202, 964, 2599
FspBI CTAG 7 cut(s) 896, 905, 1188, 1212, 1344, 1970, 2397
GlaI GCGC 1 cut(s) 1519
GluI GCNGC 3 cut(s) 202, 964, 2599
GsaI CCCAGC 2 cut(s) 1382, 2570
GsuI CTGGAG 1 cut(s) 116
HaeIII GGCC 7 cut(s) 50, 147, 766, 1096, 1327, 1377, 1890
HhaI GCGC 1 cut(s) 1520
Hin6I GCGC 1 cut(s) 1518
HinP1I GCGC 1 cut(s) 1518
HincII GTYRAC 3 cut(s) 978, 1492, 1843
HindII GTYRAC 3 cut(s) 978, 1492, 1843
HindIII AAGCTT 2 cut(s) 1477, 2243
HpaI GTTAAC 1 cut(s) 1492
HphI GGTGA 2 cut(s) 323, 1921
Hpy166II GTNNAC 9 cut(s) 605, 978, 1268, 1492, 1778, 1843, 2456, 2606, 2689
Hpy188I TCNGA 5 cut(s) 751, 1003, 1288, 2214, 2642
Hpy8I GTNNAC 9 cut(s) 605, 978, 1268, 1492, 1778, 1843, 2456, 2606, 2689
HpyAV CCTTC 7 cut(s) 333, 521, 851, 923, 1603, 1818, 1963
HpyCH4III ACNGT 6 cut(s) 757, 1823, 1926, 1962, 2072, 2202
HpyCH4IV ACGT 1 cut(s) 1108
HpyF10VI GCNNNNNNNGC 5 cut(s) 1374, 1607, 1746, 2330, 2498
HpyF3I CTNAG 7 cut(s) 362, 476, 967, 1041, 1310, 1419, 2348
HpySE526I ACGT 1 cut(s) 1108
HspAI GCGC 1 cut(s) 1518
KspAI GTTAAC 1 cut(s) 1492
Kzo9I GATC 4 cut(s) 274, 505, 652, 907
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 5 cut(s) 92, 380, 1615, 1657, 2489
Lsp1109I GCAGC 2 cut(s) 188, 975
LweI GCATC 2 cut(s) 433, 2410
MaeI CTAG 7 cut(s) 896, 905, 1188, 1212, 1344, 1970, 2397
MaeII ACGT 1 cut(s) 1108
MaeIII GTNAC 5 cut(s) 244, 732, 898, 2261, 2575
MalI GATC 4 cut(s) 276, 507, 654, 909
MboI GATC 4 cut(s) 274, 505, 652, 907
MboII GAAGA 8 cut(s) 119, 702, 803, 868, 1491, 1581, 2281, 2397
MfeI CAATTG 3 cut(s) 419, 566, 995
MflI RGATCY 1 cut(s) 907
MhlI GDGCHC 3 cut(s) 579, 1316, 1379
MlsI TGGCCA 4 cut(s) 50, 766, 1096, 1890
MluNI TGGCCA 4 cut(s) 50, 766, 1096, 1890
MlyI GAGTC 6 cut(s) 152, 424, 571, 980, 1010, 1288
MmeI TCCRAC 5 cut(s) 61, 114, 1652, 1680, 2417
Mox20I TGGCCA 4 cut(s) 50, 766, 1096, 1890
Mph1103I ATGCAT 1 cut(s) 21
MscI TGGCCA 4 cut(s) 50, 766, 1096, 1890
MseI TTAA 9 cut(s) 267, 776, 1023, 1074, 1121, 1491, 1619, 2339, 2613
MslI CAYNNNNRTG 1 cut(s) 884
Msp20I TGGCCA 4 cut(s) 50, 766, 1096, 1890
MspA1I CMGCKG 2 cut(s) 456, 2464
MspCI CTTAAG 1 cut(s) 2612
MspR9I CCNGG 3 cut(s) 47, 2543, 2648
MunI CAATTG 3 cut(s) 419, 566, 995
Mva1269I GAATGC 2 cut(s) 19, 227
MvaI CCWGG 3 cut(s) 47, 2543, 2648
MwoI GCNNNNNNNGC 5 cut(s) 1374, 1607, 1746, 2330, 2498
NdeII GATC 4 cut(s) 274, 505, 652, 907
NlaIV GGNNCC 3 cut(s) 862, 1377, 1611
NmuCI GTSAC 2 cut(s) 732, 2575
NsiI ATGCAT 1 cut(s) 21
NspI RCATGY 4 cut(s) 125, 611, 733, 889
PaeI GCATGC 2 cut(s) 125, 889
PceI AGGCCT 1 cut(s) 147
PciI ACATGT 2 cut(s) 607, 729
PciSI GCTCTTC 1 cut(s) 132
PctI GAATGC 2 cut(s) 19, 227
PfoI TCCNGGA 1 cut(s) 2646
PkrI GCNGC 3 cut(s) 203, 965, 2600
PleI GAGTC 6 cut(s) 152, 423, 570, 979, 1010, 1287
PpsI GAGTC 6 cut(s) 152, 423, 570, 979, 1010, 1287
PpuMI RGGWCCY 2 cut(s) 860, 1580
PscI ACATGT 2 cut(s) 607, 729
PshAI GACNNNNGTC 1 cut(s) 1585
Psp124BI GAGCTC 2 cut(s) 579, 1316
Psp1406I AACGTT 1 cut(s) 1108
Psp5II RGGWCCY 2 cut(s) 860, 1580
Psp6I CCWGG 3 cut(s) 45, 2541, 2646
PspFI CCCAGC 2 cut(s) 1378, 2566
PspGI CCWGG 3 cut(s) 45, 2541, 2646
PspN4I GGNNCC 3 cut(s) 862, 1377, 1611
PspOMI GGGCCC 1 cut(s) 1375
PspPI GGNCC 9 cut(s) 358, 458, 860, 1375, 1376, 1580, 1926, 1990, 2456
PspPPI RGGWCCY 2 cut(s) 860, 1580
PsuI RGATCY 1 cut(s) 907
RsaI GTAC 4 cut(s) 1091, 1164, 1825, 2690
RsaNI GTAC 4 cut(s) 1090, 1163, 1824, 2689
RseI CAYNNNNRTG 1 cut(s) 884
SacI GAGCTC 2 cut(s) 579, 1316
SapI GCTCTTC 1 cut(s) 132
SaqAI TTAA 9 cut(s) 267, 776, 1023, 1074, 1121, 1491, 1619, 2339, 2613
SatI GCNGC 3 cut(s) 202, 964, 2599
Sau3AI GATC 4 cut(s) 274, 505, 652, 907
Sau96I GGNCC 9 cut(s) 358, 458, 860, 1375, 1376, 1580, 1926, 1990, 2456
SchI GAGTC 6 cut(s) 152, 424, 571, 980, 1010, 1288
ScrFI CCNGG 3 cut(s) 47, 2543, 2648
SduI GDGCHC 3 cut(s) 579, 1316, 1379
SfaNI GCATC 2 cut(s) 433, 2410
SinI GGWCC 7 cut(s) 358, 458, 860, 1580, 1926, 1990, 2456
SmiMI CAYNNNNRTG 1 cut(s) 884
SmlI CTYRAG 5 cut(s) 689, 715, 1052, 2496, 2612
SmoI CTYRAG 5 cut(s) 689, 715, 1052, 2496, 2612
SpeI ACTAGT 1 cut(s) 1343
SphI GCATGC 2 cut(s) 125, 889
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 5 cut(s) 456, 2177, 2462, 2598, 2704
SspI AATATT 2 cut(s) 2008, 2122
SspMI CTAG 7 cut(s) 896, 905, 1188, 1212, 1344, 1970, 2397
SstI GAGCTC 2 cut(s) 579, 1316
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 3 cut(s) 45, 2541, 2646
StyI CCWWGG 2 cut(s) 1059, 1846
TaaI ACNGT 6 cut(s) 757, 1823, 1926, 1962, 2072, 2202
TaiI ACGT 1 cut(s) 1111
TaqI TCGA 3 cut(s) 1472, 1562, 2034
TatI WGTACW 1 cut(s) 2688
TauI GCSGC 1 cut(s) 2601
Tru1I TTAA 9 cut(s) 267, 776, 1023, 1074, 1121, 1491, 1619, 2339, 2613
Tru9I TTAA 9 cut(s) 267, 776, 1023, 1074, 1121, 1491, 1619, 2339, 2613
TscAI CASTG 5 cut(s) 313, 607, 1965, 2563, 2584
TseFI GTSAC 2 cut(s) 732, 2575
TseI GCWGC 2 cut(s) 201, 963
Tsp45I GTSAC 2 cut(s) 732, 2575
TspDTI ATGAA 4 cut(s) 391, 538, 824, 1970
TspRI CASTG 5 cut(s) 313, 607, 1965, 2563, 2584
Vha464I CTTAAG 1 cut(s) 2612
VpaK11BI GGWCC 7 cut(s) 358, 458, 860, 1580, 1926, 1990, 2456
XapI RAATTY 7 cut(s) 545, 742, 1216, 1761, 2172, 2316, 2388
XceI RCATGY 4 cut(s) 125, 611, 733, 889
XcmI CCANNNNNNNNNTGG 1 cut(s) 1984
XspI CTAG 7 cut(s) 896, 905, 1188, 1212, 1344, 1970, 2397
Zsp2I ATGCAT 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.