Leucine Rich repeat
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_8 | PF13855 | 3 - 38 | 1e-05 | Leucine rich repeat |
| LRR_14 | PF23598 | 17 - 182 | 7.7e-07 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 55 - 113 | 6.5e-06 | Leucine rich repeat |
| LRR_14 | PF23598 | 401 - 484 | 7.3e-07 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 404 - 463 | 3.3e-10 | Leucine rich repeat |
| LRR_8 | PF13855 | 428 - 487 | 3.4e-10 | Leucine rich repeat |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 598 |
| AccB1I | GGYRCC | 1 cut(s) | 1481 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1568 |
| AciI | CCGC | 2 cut(s) | 48, 1259 |
| AclWI | GGATC | 4 cut(s) | 327, 651, 664, 1781 |
| AcuI | CTGAAG | 1 cut(s) | 1475 |
| AfaI | GTAC | 2 cut(s) | 901, 1796 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 584, 1568 |
| AflII | CTTAAG | 2 cut(s) | 997, 1718 |
| AflIII | ACRYGT | 1 cut(s) | 645 |
| AjnI | CCWGG | 3 cut(s) | 613, 1561, 1647 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1148, 1180 |
| Alw21I | GWGCWC | 2 cut(s) | 434, 1727 |
| Alw26I | GTCTC | 4 cut(s) | 279, 640, 1643, 1810 |
| AlwI | GGATC | 4 cut(s) | 327, 651, 664, 1781 |
| AoxI | GGCC | 1 cut(s) | 60 |
| ApeKI | GCWGC | 1 cut(s) | 78 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 123 |
| AspS9I | GGNCC | 5 cut(s) | 494, 587, 1002, 1066, 1538 |
| AsuHPI | GGTGA | 1 cut(s) | 1616 |
| AvaII | GGWCC | 5 cut(s) | 494, 587, 1002, 1066, 1538 |
| BamHI | GGATCC | 1 cut(s) | 656 |
| BanI | GGYRCC | 1 cut(s) | 1481 |
| BanII | GRGCYC | 3 cut(s) | 434, 621, 1727 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 36, 68 |
| BbsI | GAAGAC | 1 cut(s) | 657 |
| Bbv12I | GWGCWC | 2 cut(s) | 434, 1727 |
| BbvI | GCAGC | 1 cut(s) | 90 |
| BccI | CCATC | 3 cut(s) | 602, 1562, 1580 |
| BciT130I | CCWGG | 3 cut(s) | 615, 1563, 1649 |
| BciVI | GTATCC | 1 cut(s) | 45 |
| BcoDI | GTCTC | 4 cut(s) | 279, 640, 1643, 1810 |
| BfaI | CTAG | 4 cut(s) | 20, 303, 558, 1478 |
| BfmI | CTRYAG | 2 cut(s) | 135, 1578 |
| BfrI | CTTAAG | 2 cut(s) | 997, 1718 |
| BfuAI | ACCTGC | 1 cut(s) | 598 |
| BfuI | GTATCC | 1 cut(s) | 45 |
| BglII | AGATCT | 1 cut(s) | 22 |
| BisI | GCNGC | 1 cut(s) | 79 |
| BlsI | GCNGC | 1 cut(s) | 80 |
| Bme1390I | CCNGG | 3 cut(s) | 615, 1563, 1649 |
| Bme18I | GGWCC | 5 cut(s) | 494, 587, 1002, 1066, 1538 |
| BmgT120I | GGNCC | 5 cut(s) | 494, 587, 1002, 1066, 1538 |
| BmiI | GGNNCC | 5 cut(s) | 495, 658, 687, 1093, 1483 |
| BmrFI | CCNGG | 3 cut(s) | 615, 1563, 1649 |
| BmsI | GCATC | 1 cut(s) | 741 |
| BpiI | GAAGAC | 1 cut(s) | 657 |
| BpmI | CTGGAG | 1 cut(s) | 597 |
| Bpu10I | CCTNAGC | 1 cut(s) | 428 |
| BpuEI | CTTGAG | 2 cut(s) | 188, 202 |
| BsaBI | GATNNNNATC | 1 cut(s) | 441 |
| BsaI | GGTCTC | 2 cut(s) | 279, 1643 |
| BsaJI | CCNNGG | 3 cut(s) | 614, 922, 1648 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 670, 700 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 584, 1568 |
| Bse1I | ACTGG | 1 cut(s) | 197 |
| Bse3DI | GCAATG | 2 cut(s) | 1102, 1636 |
| Bse8I | GATNNNNATC | 1 cut(s) | 441 |
| BseBI | CCWGG | 3 cut(s) | 615, 1563, 1649 |
| BseDI | CCNNGG | 3 cut(s) | 614, 922, 1648 |
| BseGI | GGATG | 2 cut(s) | 756, 1762 |
| BseJI | GATNNNNATC | 1 cut(s) | 441 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 584, 1568 |
| BseMI | GCAATG | 2 cut(s) | 1102, 1636 |
| BseMII | CTCAG | 5 cut(s) | 147, 273, 419, 447, 1088 |
| BseNI | ACTGG | 1 cut(s) | 197 |
| BseRI | GAGGAG | 1 cut(s) | 1828 |
| BseXI | GCAGC | 1 cut(s) | 90 |
| BseYI | CCCAGC | 2 cut(s) | 409, 1247 |
| BsgI | GTGCAG | 1 cut(s) | 1060 |
| BshFI | GGCC | 1 cut(s) | 62 |
| BshNI | GGYRCC | 1 cut(s) | 1481 |
| BsiHKAI | GWGCWC | 2 cut(s) | 434, 1727 |
| BsiSI | CCGG | 1 cut(s) | 585 |
| BslFI | GGGAC | 1 cut(s) | 507 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 584, 1568 |
| BsmAI | GTCTC | 4 cut(s) | 279, 640, 1643, 1810 |
| BsmFI | GGGAC | 1 cut(s) | 507 |
| BsmI | GAATGC | 1 cut(s) | 346 |
| BsnI | GGCC | 1 cut(s) | 62 |
| Bso31I | GGTCTC | 2 cut(s) | 279, 1643 |
| Bsp1286I | GDGCHC | 3 cut(s) | 434, 621, 1727 |
| Bsp1407I | TGTACA | 2 cut(s) | 899, 1794 |
| Bsp143I | GATC | 4 cut(s) | 22, 319, 656, 1773 |
| BspACI | CCGC | 2 cut(s) | 48, 1259 |
| BspANI | GGCC | 1 cut(s) | 62 |
| BspCNI | CTCAG | 5 cut(s) | 148, 274, 420, 446, 1087 |
| BspLI | GGNNCC | 5 cut(s) | 495, 658, 687, 1093, 1483 |
| BspMI | ACCTGC | 1 cut(s) | 598 |
| BspPI | GGATC | 4 cut(s) | 327, 651, 664, 1781 |
| BspQI | GCTCTTC | 1 cut(s) | 996 |
| BspT107I | GGYRCC | 1 cut(s) | 1481 |
| BspTI | CTTAAG | 2 cut(s) | 997, 1718 |
| BspTNI | GGTCTC | 2 cut(s) | 279, 1643 |
| BsrDI | GCAATG | 2 cut(s) | 1102, 1636 |
| BsrGI | TGTACA | 2 cut(s) | 899, 1794 |
| BsrI | ACTGG | 1 cut(s) | 197 |
| BssECI | CCNNGG | 3 cut(s) | 614, 922, 1648 |
| BssMI | GATC | 4 cut(s) | 22, 319, 656, 1773 |
| BssT1I | CCWWGG | 1 cut(s) | 922 |
| Bst2UI | CCWGG | 3 cut(s) | 615, 1563, 1649 |
| Bst4CI | ACNGT | 5 cut(s) | 726, 860, 899, 1579, 1637 |
| Bst6I | CTCTTC | 1 cut(s) | 996 |
| BstAFI | CTTAAG | 2 cut(s) | 997, 1718 |
| BstAUI | TGTACA | 2 cut(s) | 899, 1794 |
| BstDEI | CTNAG | 8 cut(s) | 82, 156, 175, 282, 428, 433, 1046, 1074 |
| BstF5I | GGATG | 2 cut(s) | 756, 1762 |
| BstKTI | GATC | 4 cut(s) | 25, 322, 659, 1776 |
| BstMAI | GTCTC | 4 cut(s) | 279, 640, 1643, 1810 |
| BstMBI | GATC | 4 cut(s) | 22, 319, 656, 1773 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 590, 683, 1047, 1136 |
| BstNI | CCWGG | 3 cut(s) | 615, 1563, 1649 |
| BstNSI | RCATGY | 3 cut(s) | 478, 649, 1214 |
| BstSCI | CCNGG | 3 cut(s) | 613, 1561, 1647 |
| BstSFI | CTRYAG | 2 cut(s) | 135, 1578 |
| BstV1I | GCAGC | 1 cut(s) | 90 |
| BstV2I | GAAGAC | 1 cut(s) | 657 |
| BstX2I | RGATCY | 4 cut(s) | 22, 319, 656, 1773 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1391 |
| BstYI | RGATCY | 4 cut(s) | 22, 319, 656, 1773 |
| BsuI | GTATCC | 1 cut(s) | 45 |
| BsuRI | GGCC | 1 cut(s) | 62 |
| BtgZI | GCGATG | 1 cut(s) | 607 |
| BtsCI | GGATG | 2 cut(s) | 756, 1762 |
| BtsIMutI | CAGTG | 1 cut(s) | 1690 |
| BveI | ACCTGC | 1 cut(s) | 598 |
| Cfr13I | GGNCC | 5 cut(s) | 494, 587, 1002, 1066, 1538 |
| CseI | GACGC | 1 cut(s) | 529 |
| Csp6I | GTAC | 2 cut(s) | 900, 1795 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1089, 1124 |
| CviAII | CATG | 7 cut(s) | 475, 646, 957, 1036, 1058, 1211, 1625 |
| CviQI | GTAC | 2 cut(s) | 900, 1795 |
| DdeI | CTNAG | 8 cut(s) | 82, 156, 175, 282, 428, 433, 1046, 1074 |
| DpnI | GATC | 4 cut(s) | 24, 321, 658, 1775 |
| DpnII | GATC | 4 cut(s) | 22, 319, 656, 1773 |
| DraI | TTTAAA | 2 cut(s) | 831, 1764 |
| Eam1104I | CTCTTC | 1 cut(s) | 996 |
| EarI | CTCTTC | 1 cut(s) | 996 |
| Ecl136II | GAGCTC | 2 cut(s) | 432, 1725 |
| Eco130I | CCWWGG | 1 cut(s) | 922 |
| Eco147I | AGGCCT | 1 cut(s) | 62 |
| Eco24I | GRGCYC | 3 cut(s) | 434, 621, 1727 |
| Eco31I | GGTCTC | 2 cut(s) | 279, 1643 |
| Eco47I | GGWCC | 5 cut(s) | 494, 587, 1002, 1066, 1538 |
| Eco53kI | GAGCTC | 2 cut(s) | 432, 1725 |
| Eco57I | CTGAAG | 1 cut(s) | 1475 |
| EcoICRI | GAGCTC | 2 cut(s) | 432, 1725 |
| EcoRI | GAATTC | 4 cut(s) | 331, 1288, 1398, 1470 |
| EcoRII | CCWGG | 3 cut(s) | 613, 1561, 1647 |
| EcoT14I | CCWWGG | 1 cut(s) | 922 |
| EcoT38I | GRGCYC | 3 cut(s) | 434, 621, 1727 |
| ErhI | CCWWGG | 1 cut(s) | 922 |
| FaeI | CATG | 7 cut(s) | 478, 649, 960, 1039, 1061, 1214, 1628 |
| FaqI | GGGAC | 1 cut(s) | 507 |
| FatI | CATG | 7 cut(s) | 474, 645, 956, 1035, 1057, 1210, 1624 |
| FauI | CCCGC | 1 cut(s) | 41 |
| Fnu4HI | GCNGC | 1 cut(s) | 79 |
| FokI | GGATG | 2 cut(s) | 763, 1769 |
| FriOI | GRGCYC | 3 cut(s) | 434, 621, 1727 |
| Fsp4HI | GCNGC | 1 cut(s) | 79 |
| FspBI | CTAG | 4 cut(s) | 20, 303, 558, 1478 |
| GluI | GCNGC | 1 cut(s) | 79 |
| GsaI | CCCAGC | 2 cut(s) | 413, 1251 |
| GsuI | CTGGAG | 1 cut(s) | 597 |
| HaeIII | GGCC | 1 cut(s) | 62 |
| HapII | CCGG | 1 cut(s) | 585 |
| HgaI | GACGC | 1 cut(s) | 529 |
| Hin1II | CATG | 7 cut(s) | 478, 649, 960, 1039, 1061, 1214, 1628 |
| HincII | GTYRAC | 1 cut(s) | 406 |
| HindII | GTYRAC | 1 cut(s) | 406 |
| HindIII | AAGCTT | 2 cut(s) | 1325, 1417 |
| HpaI | GTTAAC | 1 cut(s) | 406 |
| HpaII | CCGG | 1 cut(s) | 585 |
| HphI | GGTGA | 1 cut(s) | 1616 |
| Hpy166II | GTNNAC | 5 cut(s) | 406, 854, 1538, 1712, 1795 |
| Hpy188I | TCNGA | 8 cut(s) | 118, 436, 519, 568, 715, 1077, 1296, 1494 |
| Hpy8I | GTNNAC | 5 cut(s) | 406, 854, 1538, 1712, 1795 |
| HpyAV | CCTTC | 2 cut(s) | 38, 894 |
| HpyCH4III | ACNGT | 5 cut(s) | 726, 860, 899, 1579, 1637 |
| HpyCH4IV | ACGT | 1 cut(s) | 1443 |
| HpyCH4V | TGCA | 7 cut(s) | 78, 486, 677, 1041, 1210, 1511, 1810 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 590, 683, 1047, 1136 |
| HpyF3I | CTNAG | 8 cut(s) | 82, 156, 175, 282, 428, 433, 1046, 1074 |
| HpySE526I | ACGT | 1 cut(s) | 1443 |
| Hsp92II | CATG | 7 cut(s) | 478, 649, 960, 1039, 1061, 1214, 1628 |
| KspAI | GTTAAC | 1 cut(s) | 406 |
| Kzo9I | GATC | 4 cut(s) | 22, 319, 656, 1773 |
| LguI | GCTCTTC | 1 cut(s) | 996 |
| LmnI | GCTCC | 3 cut(s) | 691, 733, 1091 |
| Lsp1109I | GCAGC | 1 cut(s) | 90 |
| LweI | GCATC | 1 cut(s) | 741 |
| MaeI | CTAG | 4 cut(s) | 20, 303, 558, 1478 |
| MaeII | ACGT | 1 cut(s) | 1443 |
| MaeIII | GTNAC | 3 cut(s) | 32, 188, 860 |
| MalI | GATC | 4 cut(s) | 24, 321, 658, 1775 |
| MboI | GATC | 4 cut(s) | 22, 319, 656, 1773 |
| MboII | GAAGA | 7 cut(s) | 397, 657, 983, 1196, 1363, 1421, 1479 |
| MflI | RGATCY | 4 cut(s) | 22, 319, 656, 1773 |
| MhlI | GDGCHC | 3 cut(s) | 434, 621, 1727 |
| MlyI | GAGTC | 1 cut(s) | 125 |
| MmeI | TCCRAC | 2 cut(s) | 72, 728 |
| MnlI | CCTC | 9 cut(s) | 233, 383, 490, 621, 676, 1079, 1485, 1592, 1806 |
| MroXI | GAANNNNTTC | 1 cut(s) | 123 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1629 |
| MspCI | CTTAAG | 2 cut(s) | 997, 1718 |
| MspI | CCGG | 1 cut(s) | 585 |
| MspR9I | CCNGG | 3 cut(s) | 615, 1563, 1649 |
| Mva1269I | GAATGC | 1 cut(s) | 346 |
| MvaI | CCWGG | 3 cut(s) | 615, 1563, 1649 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 590, 683, 1047, 1136 |
| NdeII | GATC | 4 cut(s) | 22, 319, 656, 1773 |
| NlaIII | CATG | 7 cut(s) | 478, 649, 960, 1039, 1061, 1214, 1628 |
| NlaIV | GGNNCC | 5 cut(s) | 495, 658, 687, 1093, 1483 |
| NspI | RCATGY | 3 cut(s) | 478, 649, 1214 |
| PceI | AGGCCT | 1 cut(s) | 62 |
| PciI | ACATGT | 1 cut(s) | 645 |
| PciSI | GCTCTTC | 1 cut(s) | 996 |
| PctI | GAATGC | 1 cut(s) | 346 |
| PdmI | GAANNNNTTC | 1 cut(s) | 123 |
| PfeI | GAWTC | 9 cut(s) | 86, 442, 514, 569, 602, 694, 1020, 1361, 1653 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1568 |
| PfoI | TCCNGGA | 1 cut(s) | 1561 |
| PkrI | GCNGC | 1 cut(s) | 80 |
| PleI | GAGTC | 1 cut(s) | 125 |
| PpsI | GAGTC | 1 cut(s) | 125 |
| PscI | ACATGT | 1 cut(s) | 645 |
| Psp124BI | GAGCTC | 2 cut(s) | 434, 1727 |
| Psp6I | CCWGG | 3 cut(s) | 613, 1561, 1647 |
| PspFI | CCCAGC | 2 cut(s) | 409, 1247 |
| PspGI | CCWGG | 3 cut(s) | 613, 1561, 1647 |
| PspN4I | GGNNCC | 5 cut(s) | 495, 658, 687, 1093, 1483 |
| PspPI | GGNCC | 5 cut(s) | 494, 587, 1002, 1066, 1538 |
| PsuI | RGATCY | 4 cut(s) | 22, 319, 656, 1773 |
| RsaI | GTAC | 2 cut(s) | 901, 1796 |
| RsaNI | GTAC | 2 cut(s) | 900, 1795 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1629 |
| SacI | GAGCTC | 2 cut(s) | 434, 1727 |
| SapI | GCTCTTC | 1 cut(s) | 996 |
| SatI | GCNGC | 1 cut(s) | 79 |
| Sau3AI | GATC | 4 cut(s) | 22, 319, 656, 1773 |
| Sau96I | GGNCC | 5 cut(s) | 494, 587, 1002, 1066, 1538 |
| SchI | GAGTC | 1 cut(s) | 125 |
| ScrFI | CCNGG | 3 cut(s) | 615, 1563, 1649 |
| SduI | GDGCHC | 3 cut(s) | 434, 621, 1727 |
| SfaNI | GCATC | 1 cut(s) | 741 |
| SfcI | CTRYAG | 2 cut(s) | 135, 1578 |
| SinI | GGWCC | 5 cut(s) | 494, 587, 1002, 1066, 1538 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1629 |
| SmlI | CTYRAG | 4 cut(s) | 167, 181, 997, 1718 |
| SmoI | CTYRAG | 4 cut(s) | 167, 181, 997, 1718 |
| SseBI | AGGCCT | 1 cut(s) | 62 |
| SsiI | CCGC | 2 cut(s) | 48, 1259 |
| SspI | AATATT | 1 cut(s) | 314 |
| SspMI | CTAG | 4 cut(s) | 20, 303, 558, 1478 |
| SstI | GAGCTC | 2 cut(s) | 434, 1727 |
| StuI | AGGCCT | 1 cut(s) | 62 |
| StyD4I | CCNGG | 3 cut(s) | 613, 1561, 1647 |
| StyI | CCWWGG | 1 cut(s) | 922 |
| TaaI | ACNGT | 5 cut(s) | 726, 860, 899, 1579, 1637 |
| TaiI | ACGT | 1 cut(s) | 1446 |
| TaqI | TCGA | 3 cut(s) | 638, 705, 1368 |
| TatI | WGTACW | 2 cut(s) | 899, 1794 |
| TfiI | GAWTC | 9 cut(s) | 86, 442, 514, 569, 602, 694, 1020, 1361, 1653 |
| TscAI | CASTG | 1 cut(s) | 1690 |
| TseI | GCWGC | 1 cut(s) | 78 |
| TspDTI | ATGAA | 3 cut(s) | 195, 594, 1046 |
| TspRI | CASTG | 1 cut(s) | 1690 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1568 |
| Vha464I | CTTAAG | 2 cut(s) | 997, 1718 |
| VpaK11BI | GGWCC | 5 cut(s) | 494, 587, 1002, 1066, 1538 |
| XbaI | TCTAGA | 1 cut(s) | 19 |
| XceI | RCATGY | 3 cut(s) | 478, 649, 1214 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1060 |
| XmnI | GAANNNNTTC | 1 cut(s) | 123 |
| XspI | CTAG | 4 cut(s) | 20, 303, 558, 1478 |