Rh1CG238400

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
49674747 .. 49677957
3211 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG238400.1

Sequence Viewer

Length: 2766 bp
ATGGCTTTTGATTGGCTGGAAACAATAAACAAGCTCCCTAATCTAAGAAACTTGACCTTAATGGGAAGTGAACTTCCTCCTCCAATTCTCTCCACTCTTTCTCGCATAAATTATTCCAGTTCTCTTGTTAGTGTTGACTTGTCCATAAATCCCACCGTCAGTTCTGCGATATTCAAATGGTTGTGCAATTACATCACCACCCTTGTTCATCTTGACCTCTCTTTCACCCAGTTAAGTGATCTGATTCCTGATATTTTCTTAAACATGAGCTCACTGGTAAGTCTTGACCTCTCTTCCAACCAATTGAGTGGTTTGATTCCCGATTTTTTCAAAAACACGAGCTCACTGGAAAGTCTTGATCTCTCTTCCAACCAATTGAGCGGTTTGATTCCTAATGCTTTTGCAAACTTGAGATCACTGAAAAGTCTAGACCTCTCTTCTAACCAATTTAGTGGTTTCATTCCCGGTGCTTTTGCAAACATGAGCTCACTTGCGAATCTTGCCCTCTTTAATAACTCACTTGAAAGAGGGATCCCAACATCCATTGGTCAGTTATGCAGTTTGCAATATTTGTCAATTTCAGGTTGTAATCTGCCTGGACAACTTCCCGAGTTTGTTCAAAGATGGTCTACATGTCCTCAAAACTCGTTAGAGTTTTTGGATCTTTCCAATAATGATCTTGTTGGGACATTTCCGAGTCTTACAAACTTTTCATCACTCGAGGAATTACATATCTCTGAAAATCAGTTGAGTGGAATAATTCCTGAAAGTATTGGAAAGTTGTCTTCTCTGAAAGCATTAGATCTCTCTGAAAATCAATTTAGCGGGATGATACCAAAAAGTATTGGGAAACTTGCGTCATTGCAATACGTAGATCTCTCTAGAAATCAATTCAGTGGAAAAATACCAGAGAGTATTGGGCAACTCTCATCATTGGCATTATTATCTCTTTCTGGAAATCAATTAAGCGGAAGAATACCAGAATGGATTGGGCAACTGTCATCATTGCGGTATTTAAATTTCTCTGTAAATCAATTATGTGGAAGAATACCCAAATCCATTGGACACTTGTCCAACTTATCTTTTTTGGATCTTGGTATGAATTCTTTGAAAGGAAAAATTTCAGAATCTCATTTCTCAAAACTCTTCAACTTAAAAGAGTTGGATTTATCCAACTCATTGTTAGAATTCAATGTCACTTATGATTGGCTTCCTCCTTTTCAATTGTATTTCCTACGTTTGAGGTCTTGTCAGGTGGGGCCGTATTTTCCAAAATGGCTCCGAACCCAAAAAGGTCTTTCCCACCTTGATATGTCTTATGCTAATATTTCTGATGTTTTCCCAAGTTGGTTTTGGAGTGTTTTTGGTGACATTCAGACTATAGATTTGTCTCATAATCAAATTAGAGGAACATTATGGAGTTCAGAGGCTGTATCATTCAGTGGAGTTGAAGTTCGATTTAGTTTGAACCAATTGGAAGGTCCAATACCCTCATTTCTATCAAATGCATCATATTTGGATCTGTCTGATAATAAATTTTCAGAGATGACTTCCTTCTTGTGTTCTTCGAATGTCAAAATTTCAAAATTTCTTGATCTCTCCAAAAACCATATTTCAGGAGAACTTCCAGATTGTTGGAGACATTGGGACAATCTAGAACTTCTCGATTTGAGTAACAATTCTTTTTCTGGGAAAATCCCACCCAATATGGGACGTTTACTTCGAATCAAAACATTGAAATTAAGGAGCAACAGACTTGTGGGAGAATTGCCTTCATCCTTGAAGAATTGTACAAGCTTAAATGTTATTGATCTTGGGAACAATAAGCTTTCAAGTTCCGTGCCTGAATGGTTAGGGGTCAGTCTTCCAAATTTGGTTATTCTTATGCTTCAATTTAATCAGCTTAGTGGAAGTTTGCCTTCACAATTATGTCATCTAGCACACCTTCAAATTTTGGATGTCTCTATGAATGTAATCTCTGGAACTATACCAAAATGCCTCAATAATTTGACTTCTTTGGCGCAAGAAGGAAATTCAAATCTAACCATCAGACATTCTTTTAATACATCTGATGCTGAACCACCTATGAGTTCTCTTTATTATGAGGATGATGCAACCTTCATGTGGAAAGGAACATTGTCTTCATACAAAAGTACTTTGGGACTGGTCAAGAGAATTGATCTCTCCAGCAACAGATTAACTGGGGAGATTCCAAGTGAAATCACTCATCTTGTTGGGCTAGTTTCTCTGAACCTTTCGAGGAACAATTTAACTGGACAAATACCTTTAGAGATCGGAAAGTTGAAGTCACTTGATTCTCTTGATTTGTCTAGAAACAAGATAGGTGGTGGGATTCCGACAAGCCTTGTTTGGGTCTATGGACTTGGTGTCATGGATTTGTCATATAACAACTTGTCTGGTGAAATTCCAACTGGTACTCAACTCCAGAGCTTTGATCCGTCCTTTTATGCTGGAAATCCTCAATTGTGTGGACTTCCACTTGAAGTTTGTAATCCGGAGGGAACTGGTCGGCCAAATGTCTCGAGTGATCAAGAAGATCCAGATGAGCTCATCACGCAAGGCTTTTACATAAGTCTGGGACTTGGATTTGCTGTTGGATTCTGGGGAGTCTGTGGGAGTTTGATATTCAAGCGGTCGTGGAGATATGCATACTACAACTTCTTGAATGCTTTAAATGATTGGCTTTATGTGAGGGTAGCTTTGATCAAACGACAGTTATGGGATATGCTTAATAGACAATCTTAA

Protein Analysis

921

Amino Acids

101.95

Weight (kDa)

5.59

Isoelectric Point (pI)

36.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 91 - 150 1.1e-14 Leucine rich repeat
LRR_8 PF13855 142 - 198 8.8e-07 Leucine rich repeat
LRR_8 PF13855 216 - 274 3.9e-08 Leucine rich repeat
LRR_14 PF23598 230 - 439 8.8e-24 Leucine-rich repeat region
LRR_8 PF13855 239 - 298 2.7e-12 Leucine rich repeat
LRR_8 PF13855 267 - 322 9.4e-08 Leucine rich repeat
LRR_8 PF13855 287 - 346 4.2e-07 Leucine rich repeat
LRR_8 PF13855 576 - 635 3.6e-06 Leucine rich repeat
LRR_8 PF13855 723 - 781 1.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 381
AccI GTMKAC 1 cut(s) 629
AccIII TCCGGA 1 cut(s) 2515
AciI CCGC 5 cut(s) 381, 825, 969, 1009, 2653
AclWI GGATC 7 cut(s) 526, 539, 669, 1098, 1527, 2450, 2552
AcoI YGGCCR 1 cut(s) 2531
AfaI GTAC 3 cut(s) 1792, 2155, 2437
AfiI CCNNNNNNNGG 3 cut(s) 1709, 2124, 2371
AflIII ACRYGT 1 cut(s) 632
AhdI GACNNNNNGTC 1 cut(s) 2387
AjnI CCWGG 1 cut(s) 595
AloI GAACNNNNNNTCC 2 cut(s) 1437, 1469
Alw21I GWGCWC 4 cut(s) 272, 344, 488, 2571
Alw26I GTCTC 4 cut(s) 1395, 1633, 1966, 2545
AlwI GGATC 7 cut(s) 526, 539, 669, 1098, 1527, 2450, 2552
AlwNI CAGNNNCTG 1 cut(s) 1430
Ama87I CYCGRG 3 cut(s) 608, 719, 2542
Aor13HI TCCGGA 1 cut(s) 2515
AoxI GGCC 2 cut(s) 1259, 2531
ArsI GACNNNNNNTTYG 4 cut(s) 1369, 1401, 1704, 1736
Asp700I GAANNNNTTC 1 cut(s) 1120
AspLEI GCGC 1 cut(s) 2023
AspS9I GGNCC 2 cut(s) 1259, 1481
AsuC2I CCSGG 1 cut(s) 465
AsuHPI GGTGA 4 cut(s) 187, 217, 1379, 2432
AsuII TTCGAA 2 cut(s) 1568, 1723
AvaI CYCGRG 3 cut(s) 608, 719, 2542
AvaII GGWCC 1 cut(s) 1481
BamHI GGATCC 1 cut(s) 531
BanII GRGCYC 4 cut(s) 272, 344, 488, 2571
BarI GAAGNNNNNNTAC 2 cut(s) 1470, 1502
BauI CACGAG 1 cut(s) 337
BbsI GAAGAC 3 cut(s) 777, 1856, 2133
Bbv12I GWGCWC 4 cut(s) 272, 344, 488, 2571
BccI CCATC 2 cut(s) 618, 2054
BceAI ACGGC 1 cut(s) 1246
BciT130I CCWGG 1 cut(s) 597
BclI TGATCA 2 cut(s) 2548, 2724
BcnI CCSGG 1 cut(s) 465
BcoDI GTCTC 4 cut(s) 1395, 1633, 1966, 2545
BfaI CTAG 6 cut(s) 428, 882, 1655, 1937, 2240, 2331
BfmI CTRYAG 1 cut(s) 1380
BglII AGATCT 2 cut(s) 802, 874
BmcAI AGTACT 1 cut(s) 2155
Bme1390I CCNGG 2 cut(s) 465, 597
Bme18I GGWCC 1 cut(s) 1481
BmeRI GACNNNNNGTC 1 cut(s) 2387
BmeT110I CYCGRG 3 cut(s) 608, 719, 2542
BmgT120I GGNCC 2 cut(s) 1259, 1481
BmiI GGNNCC 3 cut(s) 533, 1260, 1280
BmrFI CCNGG 2 cut(s) 465, 597
BmrI ACTGGG 2 cut(s) 223, 2211
BmsI GCATC 3 cut(s) 1517, 2062, 2101
BmuI ACTGGG 2 cut(s) 223, 2211
BoxI GACNNNNGTC 1 cut(s) 1069
BpiI GAAGAC 3 cut(s) 777, 1856, 2133
BpmI CTGGAG 2 cut(s) 2170, 2429
Bpu14I TTCGAA 2 cut(s) 1568, 1723
BpuEI CTTGAG 1 cut(s) 430
BpuMI CCSGG 1 cut(s) 465
BsaAI YACGTR 1 cut(s) 871
BsaWI WCCGGW 1 cut(s) 2515
BsaXI ACNNNNNCTCC 2 cut(s) 1437, 1467
Bsc4I CCNNNNNNNGG 3 cut(s) 1709, 2124, 2371
Bse1I ACTGG 9 cut(s) 117, 229, 279, 351, 2169, 2206, 2278, 2437, 2530
Bse3DI GCAATG 2 cut(s) 860, 1004
BseAI TCCGGA 1 cut(s) 2515
BseBI CCWGG 1 cut(s) 597
BseGI GGATG 5 cut(s) 539, 834, 1775, 1963, 2113
BseLI CCNNNNNNNGG 3 cut(s) 1709, 2124, 2371
BseMI GCAATG 2 cut(s) 860, 1004
BseNI ACTGG 9 cut(s) 117, 229, 279, 351, 2169, 2206, 2278, 2437, 2530
BseRI GAGGAG 1 cut(s) 69
Bsh1285I CGRYCG 1 cut(s) 2657
BshFI GGCC 2 cut(s) 1261, 2533
BsiEI CGRYCG 1 cut(s) 2657
BsiHKAI GWGCWC 4 cut(s) 272, 344, 488, 2571
BsiHKCI CYCGRG 3 cut(s) 608, 719, 2542
BsiSI CCGG 2 cut(s) 465, 2516
BslFI GGGAC 5 cut(s) 700, 1661, 1725, 2175, 2613
BslI CCNNNNNNNGG 3 cut(s) 1709, 2124, 2371
BsmAI GTCTC 4 cut(s) 1395, 1633, 1966, 2545
BsmFI GGGAC 5 cut(s) 700, 1661, 1725, 2175, 2613
BsmI GAATGC 1 cut(s) 2692
BsnI GGCC 2 cut(s) 1261, 2533
BsoBI CYCGRG 3 cut(s) 608, 719, 2542
Bsp119I TTCGAA 2 cut(s) 1568, 1723
Bsp1286I GDGCHC 4 cut(s) 272, 344, 488, 2571
Bsp13I TCCGGA 1 cut(s) 2515
Bsp1407I TGTACA 1 cut(s) 1790
BspACI CCGC 5 cut(s) 381, 825, 969, 1009, 2653
BspANI GGCC 2 cut(s) 1261, 2533
BspEI TCCGGA 1 cut(s) 2515
BspLI GGNNCC 3 cut(s) 533, 1260, 1280
BspPI GGATC 7 cut(s) 526, 539, 669, 1098, 1527, 2450, 2552
BspT104I TTCGAA 2 cut(s) 1568, 1723
BsrBI CCGCTC 1 cut(s) 381
BsrDI GCAATG 2 cut(s) 860, 1004
BsrGI TGTACA 1 cut(s) 1790
BsrI ACTGG 9 cut(s) 117, 229, 279, 351, 2169, 2206, 2278, 2437, 2530
BssSI CACGAG 1 cut(s) 337
Bst2BI CACGAG 1 cut(s) 337
Bst2UI CCWGG 1 cut(s) 597
Bst4CI ACNGT 3 cut(s) 157, 999, 2736
Bst6I CTCTTC 4 cut(s) 298, 370, 442, 1151
BstAUI TGTACA 1 cut(s) 1790
BstBAI YACGTR 1 cut(s) 871
BstBI TTCGAA 2 cut(s) 1568, 1723
BstDEI CTNAG 2 cut(s) 44, 1904
BstF5I GGATG 5 cut(s) 539, 834, 1775, 1963, 2113
BstHHI GCGC 1 cut(s) 2023
BstMAI GTCTC 4 cut(s) 1395, 1633, 1966, 2545
BstMCI CGRYCG 1 cut(s) 2657
BstMWI GCNNNNNNNGC 2 cut(s) 500, 2575
BstNI CCWGG 1 cut(s) 597
BstNSI RCATGY 1 cut(s) 636
BstPAI GACNNNNGTC 1 cut(s) 1069
BstSCI CCNGG 2 cut(s) 463, 595
BstSFI CTRYAG 1 cut(s) 1380
BstSNI TACGTA 1 cut(s) 871
BstV2I GAAGAC 3 cut(s) 777, 1856, 2133
BstX2I RGATCY 7 cut(s) 531, 661, 802, 874, 1090, 1519, 2557
BstXI CCANNNNNNTGG 3 cut(s) 308, 452, 1635
BstYI RGATCY 7 cut(s) 531, 661, 802, 874, 1090, 1519, 2557
BsuRI GGCC 2 cut(s) 1261, 2533
BtsCI GGATG 5 cut(s) 539, 834, 1775, 1963, 2113
BtsIMutI CAGTG 5 cut(s) 272, 344, 416, 901, 1447
CaiI CAGNNNCTG 1 cut(s) 1430
CfoI GCGC 1 cut(s) 2023
Cfr13I GGNCC 2 cut(s) 1259, 1481
CseI GACGC 1 cut(s) 846
Csp6I GTAC 3 cut(s) 1791, 2154, 2436
CspCI CAANNNNNGTGG 2 cut(s) 2326, 2361
CviAII CATG 5 cut(s) 265, 481, 633, 2122, 2392
CviQI GTAC 3 cut(s) 1791, 2154, 2436
DdeI CTNAG 2 cut(s) 44, 1904
DraI TTTAAA 2 cut(s) 1017, 2694
DriI GACNNNNNGTC 1 cut(s) 2387
EaeI YGGCCR 1 cut(s) 2531
Eam1104I CTCTTC 4 cut(s) 298, 370, 442, 1151
Eam1105I GACNNNNNGTC 1 cut(s) 2387
EarI CTCTTC 4 cut(s) 298, 370, 442, 1151
Ecl136II GAGCTC 4 cut(s) 270, 342, 486, 2569
Eco105I TACGTA 1 cut(s) 871
Eco24I GRGCYC 4 cut(s) 272, 344, 488, 2571
Eco47I GGWCC 1 cut(s) 1481
Eco53kI GAGCTC 4 cut(s) 270, 342, 486, 2569
Eco88I CYCGRG 3 cut(s) 608, 719, 2542
EcoICRI GAGCTC 4 cut(s) 270, 342, 486, 2569
EcoRI GAATTC 2 cut(s) 1102, 1187
EcoRII CCWGG 1 cut(s) 595
EcoT22I ATGCAT 2 cut(s) 1510, 2671
EcoT38I GRGCYC 4 cut(s) 272, 344, 488, 2571
FaeI CATG 5 cut(s) 268, 484, 636, 2125, 2395
FalI AAGNNNNNCTT 2 cut(s) 1903, 1935
FaqI GGGAC 5 cut(s) 700, 1661, 1725, 2175, 2613
FatI CATG 5 cut(s) 264, 480, 632, 2121, 2391
FauI CCCGC 1 cut(s) 818
FbaI TGATCA 2 cut(s) 2548, 2724
FblI GTMKAC 1 cut(s) 629
FokI GGATG 5 cut(s) 526, 841, 1762, 1970, 2120
FriOI GRGCYC 4 cut(s) 272, 344, 488, 2571
FspBI CTAG 6 cut(s) 428, 882, 1655, 1937, 2240, 2331
GlaI GCGC 1 cut(s) 2022
GsuI CTGGAG 2 cut(s) 2170, 2429
HaeIII GGCC 2 cut(s) 1261, 2533
HapII CCGG 2 cut(s) 465, 2516
HgaI GACGC 1 cut(s) 846
HhaI GCGC 1 cut(s) 2023
Hin1II CATG 5 cut(s) 268, 484, 636, 2125, 2395
Hin6I GCGC 1 cut(s) 2021
HinP1I GCGC 1 cut(s) 2021
HincII GTYRAC 1 cut(s) 136
HindII GTYRAC 1 cut(s) 136
HindIII AAGCTT 2 cut(s) 1795, 1826
HpaII CCGG 2 cut(s) 465, 2516
HphI GGTGA 4 cut(s) 187, 217, 1379, 2432
Hpy166II GTNNAC 5 cut(s) 71, 136, 630, 1718, 2492
Hpy8I GTNNAC 5 cut(s) 71, 136, 630, 1718, 2492
HpyAV CCTTC 7 cut(s) 1472, 1564, 1782, 1929, 1955, 2021, 2128
HpyCH4III ACNGT 3 cut(s) 157, 999, 2736
HpyCH4IV ACGT 3 cut(s) 870, 1237, 1714
HpyCH4V TGCA 9 cut(s) 186, 404, 476, 558, 565, 865, 1508, 2114, 2669
HpyF10VI GCNNNNNNNGC 2 cut(s) 500, 2575
HpyF3I CTNAG 2 cut(s) 44, 1904
HpySE526I ACGT 3 cut(s) 870, 1237, 1714
Hsp92II CATG 5 cut(s) 268, 484, 636, 2125, 2395
HspAI GCGC 1 cut(s) 2021
Kpn2I TCCGGA 1 cut(s) 2515
Ksp22I TGATCA 2 cut(s) 2548, 2724
LmnI GCTCC 3 cut(s) 39, 1284, 1746
LweI GCATC 3 cut(s) 1517, 2062, 2101
MaeI CTAG 6 cut(s) 428, 882, 1655, 1937, 2240, 2331
MaeII ACGT 3 cut(s) 870, 1237, 1714
MaeIII GTNAC 4 cut(s) 1195, 1367, 1673, 2307
MbiI CCGCTC 1 cut(s) 381
MfeI CAATTG 5 cut(s) 302, 374, 1223, 1472, 2483
MflI RGATCY 7 cut(s) 531, 661, 802, 874, 1090, 1519, 2557
MhlI GDGCHC 4 cut(s) 272, 344, 488, 2571
MlyI GAGTC 2 cut(s) 706, 2637
MmeI TCCRAC 9 cut(s) 321, 393, 1098, 1143, 1197, 1616, 2381, 2453, 2596
Mph1103I ATGCAT 2 cut(s) 1510, 2671
MroI TCCGGA 1 cut(s) 2515
MroXI GAANNNNTTC 1 cut(s) 1120
MslI CAYNNNNRTG 1 cut(s) 1927
MspI CCGG 2 cut(s) 465, 2516
MspR9I CCNGG 2 cut(s) 465, 597
MunI CAATTG 5 cut(s) 302, 374, 1223, 1472, 2483
Mva1269I GAATGC 1 cut(s) 2692
MvaI CCWGG 1 cut(s) 597
MwoI GCNNNNNNNGC 2 cut(s) 500, 2575
NciI CCSGG 1 cut(s) 465
NlaIII CATG 5 cut(s) 268, 484, 636, 2125, 2395
NlaIV GGNNCC 3 cut(s) 533, 1260, 1280
NmuCI GTSAC 3 cut(s) 1195, 1367, 2307
NsiI ATGCAT 2 cut(s) 1510, 2671
NspI RCATGY 1 cut(s) 636
NspV TTCGAA 2 cut(s) 1568, 1723
PaeR7I CTCGAG 2 cut(s) 719, 2542
PciI ACATGT 1 cut(s) 632
PcsI WCGNNNNNNNCGW 1 cut(s) 1720
PctI GAATGC 1 cut(s) 2692
PdmI GAANNNNTTC 1 cut(s) 1120
PleI GAGTC 2 cut(s) 705, 2636
PpsI GAGTC 2 cut(s) 705, 2636
Ppu21I YACGTR 1 cut(s) 871
PscI ACATGT 1 cut(s) 632
PshAI GACNNNNGTC 1 cut(s) 1069
Psp124BI GAGCTC 4 cut(s) 272, 344, 488, 2571
Psp6I CCWGG 1 cut(s) 595
PspGI CCWGG 1 cut(s) 595
PspN4I GGNNCC 3 cut(s) 533, 1260, 1280
PspPI GGNCC 2 cut(s) 1259, 1481
PspXI VCTCGAGB 1 cut(s) 719
PstNI CAGNNNCTG 1 cut(s) 1430
PsuI RGATCY 7 cut(s) 531, 661, 802, 874, 1090, 1519, 2557
RsaI GTAC 3 cut(s) 1792, 2155, 2437
RsaNI GTAC 3 cut(s) 1791, 2154, 2436
RseI CAYNNNNRTG 1 cut(s) 1927
SacI GAGCTC 4 cut(s) 272, 344, 488, 2571
Sau96I GGNCC 2 cut(s) 1259, 1481
ScaI AGTACT 1 cut(s) 2155
SchI GAGTC 2 cut(s) 706, 2637
ScrFI CCNGG 2 cut(s) 465, 597
SduI GDGCHC 4 cut(s) 272, 344, 488, 2571
SfaNI GCATC 3 cut(s) 1517, 2062, 2101
SfcI CTRYAG 1 cut(s) 1380
Sfr274I CTCGAG 2 cut(s) 719, 2542
SfuI TTCGAA 2 cut(s) 1568, 1723
SinI GGWCC 1 cut(s) 1481
SlaI CTCGAG 2 cut(s) 719, 2542
SmiI ATTTAAAT 1 cut(s) 1017
SmiMI CAYNNNNRTG 1 cut(s) 1927
SmlI CTYRAG 3 cut(s) 409, 719, 2542
SmoI CTYRAG 3 cut(s) 409, 719, 2542
SnaBI TACGTA 1 cut(s) 871
SsiI CCGC 5 cut(s) 381, 825, 969, 1009, 2653
SspI AATATT 2 cut(s) 569, 1327
SspMI CTAG 6 cut(s) 428, 882, 1655, 1937, 2240, 2331
SstI GAGCTC 4 cut(s) 272, 344, 488, 2571
StyD4I CCNGG 2 cut(s) 463, 595
SwaI ATTTAAAT 1 cut(s) 1017
TaaI ACNGT 3 cut(s) 157, 999, 2736
TaiI ACGT 3 cut(s) 873, 1240, 1717
TaqI TCGA 7 cut(s) 720, 1456, 1568, 1665, 1723, 2258, 2543
TatI WGTACW 2 cut(s) 1790, 2153
TscAI CASTG 5 cut(s) 279, 351, 423, 901, 1447
TseFI GTSAC 3 cut(s) 1195, 1367, 2307
Tsp45I GTSAC 3 cut(s) 1195, 1367, 2307
TspDTI ATGAA 8 cut(s) 197, 448, 702, 1115, 1764, 1982, 2110, 2133
TspGWI ACGGA 2 cut(s) 1828, 2448
TspRI CASTG 5 cut(s) 279, 351, 423, 901, 1447
VpaK11BI GGWCC 1 cut(s) 1481
XbaI TCTAGA 4 cut(s) 427, 881, 1654, 2330
XceI RCATGY 1 cut(s) 636
XcmI CCANNNNNNNNNTGG 1 cut(s) 1350
XhoI CTCGAG 2 cut(s) 719, 2542
XmiI GTMKAC 1 cut(s) 629
XmnI GAANNNNTTC 1 cut(s) 1120
XspI CTAG 6 cut(s) 428, 882, 1655, 1937, 2240, 2331
ZrmI AGTACT 1 cut(s) 2155
Zsp2I ATGCAT 2 cut(s) 1510, 2671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.