Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000028

Physical Location & Seq

Genomic Coordinates Reverse (-)

47714615 .. 47719564

Gene Structure 4950 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58048

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4950 bp

ATGGAGTTGGGAAGGTGGCTCAAACATGCTTATGCAATATCAATTGTGCTTCTTCTGCATATCAACGCTTCCTTATCCCTCGGCCACCACCATGCTAACGTGACGGCAAGGTGCCTAGAGAGGGAGAGGGATGCACTGCTTGCTATCAAAGGAAACCTGGTGGATGAATACAACCTACTCTCTTCGTGGGGAAGCGAAGCCCAAAAGCGAGACTGTTGCGGATGGGAAAGAGTCCACTGCGATCACCAGACCGGCCATGTTATTCAACTTCGTCTGAATGGAGAACCGAAGATGATCTATTTGCAACGTGAGTATGTATTGAAAACTTTGCAAGGTGAGCATATATTGAAAACTTGGCAAGGTGAAATTAGTCCTAAAATCGTTGAGTTGCAGCATTTGGAATATTTGGACCTCAGTCACAATTTCTTCAATGCCAACCAAATTCCAGCGCTCATTTGTTCTCTATCCAATCTAAGACACCTAGATCTCAATTCCAATGACCTCACTGGGAGCAAAATTCCAGAGCTCATTGGTAATCTGACCAATTTAAGATATCTAGATCTCTCTGATGCTGTCTTTGGAGGTGAAATTCCATATCTTCACCTTGGAAACCTTACTCACTTGCAGTATCTCAATCTCGGGAATAATTTCTTCACTCCTACTGGAGGAAACCTCAATTGGCTCCCACATCCTTCTTCTTTAAAATACGTGGACCTGAGTAGGGCCAATCTAAGTAAGGTTTCTGATTGGCTGGAAACAATAAACAAGCTCCCTGATCTAAAAAACTTGACCTTAATAGGATGTGATCTTCCTCCACCAATTCTTTCCACTCTTTCTCACATAAATTCTTCCAATTCTCTTGTAAGTATTGAATTGTCCAGAAATCCTGCTGTCATTTCTTCAATATTCAAATGGTTTTGCAATTTCAATACCACCCTTGTTCATCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTTCAAATGCTTTCTCAAACATGAGCTCACTTGCATATCTTGACCTCTCATTCAACCAATTAAGTGGTTTGAATCCCGATGTTTTCAGAAACATGAGCTCACTTGCATATCTTGACCTCTCTTTCAACCAATTAAGTGGTTTGAATCCCGATGTTTTTAGAAACATGGGCTCACTTGAACATCTATCCCTCTCTTCCAACCAATTTAGTGGTTTGATTCCCGATGCTTTCAGAAACACGGGCTCACTTGAATATCTTGACCTCTCTTCCAACCAATTTAGTGGTTTGATTCCCGATGTTTTCAGAAACATGGGCTCACTTGAACATCTATCCCTCTCTTCCAACCACTTTAGTGGTTTGATTTCGAATGCTTTCACAAACATGAGCTCACTTGCATATCTTGACCTCACTTCCAACCAATTTAGTGGTTTGATTCCCGATGTTTTCAGAAACATGGGCTCACTTGAACATCTATCCCTCTCTTCCAACCAATTTAGTGGCTTGATTTCGAATGCTTTCACAAACATGAGCTCACTTGCATATCTTGACCTCTCTTCCAACCAATTTAGTGGTTTGATTCCCGATGCTTTCAGAAACACAGGCTCACTTGAATATCTTGACCTCTCTTCCAATCAATTTAGTGGTTTGATTCCTGATGGTTTCAGAAACACGAGCTCACTTGAATATATATCCCTCTCTTCCAACCAATTTAGCGGTTTGACTTCGAATGCTTTCACAAACATGAGCTCACTTGCAGATCTTGACCTCTCTTTCAACCAATTTAGTGGTTTGATTCCCGATGTTTTCAGAAACATGGGCTCACTTGAACATCTATCCCTCTTTTCCAACCAATTTAGTGGTTTGATTTCGAATGCTTTCACAAACATGAGCTCACTTGCATATCTTGACCTCTCTTCCAACCAATTGAGTGGTTTGATTCCCGATGCTTTCAGAAACACAGGCTCACTTGAATATCTTGACCTCTCTTCCAACCAATTTAGTGGTTTGATTCCCGATGCTTTCAGAAACATGAGCTCACTTGCAAGTCTATACCTCTCTTCCAACCAATTAAGTGGTTTGACTCCCGATGCTTTCGCAAACATGGGCTCACTTGCAAGTCTATACCTCTATTCCAACCAATTAAGTGGCTTGACTCCCGATGCTTTCGCAAACATGAGCTCACTTGAATATCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGACTCCCGATGCTTTCAGAAACATGAGCTCACTTGCAAGTCTTGACCTCTCTTCCAACCAATTTAGTGGTTTGACTCCCGATGTTTTCAGAAACATGGGCTCACTTGCAAGTCTTGACCTCTCTTTCAACCAATTTAGTTGTTTGACTCCTGATACTTTCGCAAACATGAGCCTACTTGCAAGTCTTGACCTCTCTTTCAACCAATTTAGTGGTTTGACCCCTGATGCTTTCGCAAACATGAGCTCACTTGAATATCTTGACCTCTCTTCCAACCAATTTAGTGGTTTGATTCCCGATGCTTTCGCAAACATGAGCTCACTTGCAAGTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCAATGCTTTCGCAAACATGAGCTCACTTTCATATCTTAACCTCTCTTCCAACCAATTAAGTGGTTTGAGTCACGATGGTTTTGCAAACATGAGCTCACTTGCACGTCTTGACATCTCTTATAACCCATTCGGAGGAGGGATCCCAGCATCCATTGGCCAGTTATGCAGTTTGCGACATGTGTCAGTTTTAGGTTGTAATCTGACAAGTGGACAACTTTCTAAGTTTGTTCAAGGATGTTCGACATGCGTTCAAAACTCATTACAGAGTTTTGATCTTTCCAATAATCATCTTGCTGGGTCACTTCCTAATCTTACAAGCTTTTCATCATTGGAGGTATTAACTCTCTCCAAAAATAAGTTGAGTGTTCTGGATAGTATTGGAAATTTTTCTTCTCTGAAACAATTATATGTTGATCAAAATCAATTACGATGGATGATACCGGAAAGTATTGGGAAACTCTCCGGTTTGTATGTCTTGGATCTCTCTGGAAATCTTCTGAGCGGAAGAATTCCAGAAGGTATTGGGCAACTCTCATCATTGGAACGTTTAGTTCTTTCTGGAAATCAATTAAGCAAAAGCATACCTGAAACTATTGGGCAATTATCATCTTTGCGAAGTTTAGATCTCTCTAGAAATCTGTTAAGCGGAAGAATACCGCAAAGTGTTGGACAGATGTCTGGGTTGGGCTTTATAAATCTTAGTATGAATCGTTTGGAAGGGGAGATTTCAGAAACTCATTTCTCAAAACTCTTCCATTTACATGAGTTGGATTTATCCTATAACTCATTATTAGAATTCAATGTCACTTCGGATTGGGTTCCTCCTTTTCAATTGTCTTATCTAAGTTTGAGGTCTTGTAAGGTGGGGCCGGATTTCCCAAAATGGATTCGAACCCAAAAAGGTCTTTCCAACCTTGATATGTCTTATGGTGACATTTCAGATGTCTTTCCAAGTTGGTTCTGGAGTCTATTTGGTGACACTCCGACTATAGATATGTCTAACAATCAAATTAGAGGAACATTAGGGAGTTCAAAGGTTGTATCATTCAGCGGAGTTGAAGTTCGATTTAGTTCGAACCAATTGGAAGGTCCAATACCCTCATTTCTATCAAAAGCGTCATATTTGGATCTCTCTGATAACAAATTTTCAGAGATGACTTCCTTCTTGTGTTCTTCGAATGTTAAAATTTCCAAATTTCTTGATCTCTCCAGTAACCATATTCCTGGAGAACTTCCAGATTGCTGGAGACATTGGGTTAATCTAGAACTTCTCGATTTGAGTAACAATTCTTTTTCTGGGAAAATCCCACCCAATATAGGATGTTTACTTCGAATCAAAACATTGAAATTGAGGAGCAACAGACTTGTGGGAGAATTGCCTTCATCCTTGAAGAATTGTACAAGCTTAAATGTTATTGATCTTGGGAACAATACGCTTTCAAGTTCAGTCCCTGAATGGTTAGGGGTCAGTCTTCCAAATTTGGTTATTCTTATGCTTCAATCCAATCAGCTTAGTGGAAGTTTGCCTTCACAATTATGCCATCTTGCACGCCTTCAAATTTTGGATGTCTCTATGAATGAAATCTCAGGAACTATACCAAAATGCCTCGATAGTTTGACTTCTTTGGCGCAAGAAGGAAATTCAAATCTAACCATCAGACATTCTTTTAATGTGACTTATTCTAATGGAAATGTGAGTTCTCTTTATTATGAGGATGATGCAACCTTCATGTGGAAGAGAACATTGTCTACATACAAAAACACTTTGGGACTAGTCAAGAGCATTGATCTCTCAAGCAACAGATTAACTGGGGAGATTCCAAGTGAAATCACTCATCTTGTTGGGCTAGTTTCTCTGAACCTTTCAAGGAACAATTTGACTGGACAAATACCTCTAGAGATCGGAAAGTTGAAGTCACTAGATTCTCTTGATTTGTCTAGGAACAAGATTGGTGGCGGGATTCCGACAAGCCTTGCTCGGATTGATAGACTTGGTGACATGGATTTATCATATAACAACTTGTCTGGTGAAATTCCAACTGGCACTCAGCTCCAGAGCTTTGATCCGTCCTTTTATGCCGGAAATCCTCAATTGTGTGGACGTCCACTTGAAGCTTGTAATCCAGAGGGGACTGGTCGGCCAAATGTCTCGAGTGATCAAGCAGATCCAGATGAGCTCATCACACTAGGCTTTTACATTAGTCTGGGCCTTGGATTTGGTGTTGGATTCTGGGGAGTCTCTGGGTGTTTGATATTCAAGCGGGACAAGCGGTCATGGAGATATGCATACTACAACTTCTTGAATGGTTTAAATGTTTGGCTTTATGTGAGGGTAGCTTTGATCAGACGGCAATTAAAGGATATGCTTAGTGGACAATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1649

Amino Acids

180.81

Weight (kDa)

5.31

Isoelectric Point (pI)

32.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	40 - 81	1.3e-07	Leucine rich repeat N-terminal domain
LRR_14	PF23598	118 - 212	5.4e-09	Leucine-rich repeat region
LRR_8	PF13855	286 - 347	3.9e-07	Leucine rich repeat
LRR_8	PF13855	312 - 371	9e-14	Leucine rich repeat
LRR_8	PF13855	336 - 395	1.2e-15	Leucine rich repeat
LRR_8	PF13855	360 - 419	1.7e-14	Leucine rich repeat
LRR_8	PF13855	388 - 443	1e-11	Leucine rich repeat
LRR_14	PF23598	408 - 607	2.7e-06	Leucine-rich repeat region
LRR_8	PF13855	432 - 491	1e-11	Leucine rich repeat
LRR_8	PF13855	456 - 515	1.1e-12	Leucine rich repeat
LRR_8	PF13855	486 - 539	1e-10	Leucine rich repeat
LRR_8	PF13855	504 - 563	1.7e-12	Leucine rich repeat
LRR_8	PF13855	552 - 611	2.4e-11	Leucine rich repeat
LRR_8	PF13855	608 - 659	9.3e-11	Leucine rich repeat
LRR_8	PF13855	648 - 707	4.4e-14	Leucine rich repeat
LRR_8	PF13855	696 - 755	1.9e-16	Leucine rich repeat
LRR_8	PF13855	744 - 803	7.2e-13	Leucine rich repeat
LRR_14	PF23598	787 - 925	3.6e-06	Leucine-rich repeat region
LRR_8	PF13855	793 - 851	7e-16	Leucine rich repeat
LRR_8	PF13855	840 - 898	4.3e-13	Leucine rich repeat
LRR_14	PF23598	955 - 1163	1.6e-21	Leucine-rich repeat region
LRR_8	PF13855	1301 - 1360	9.6e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000028)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica	MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica	Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis	pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis	RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata	RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora	Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii	Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa	Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha	Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana	Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2688, 3260
AatII	GACGTC	1 cut(s)	4672
AccB1I	GGYRCC	1 cut(s)	111
AccBSI	CCGCTC	1 cut(s)	3069
AccI	GTMKAC	1 cut(s)	4316
AciI	CCGC	9 cut(s)	219, 1692, 3069, 3213, 3224, 3618, 4524, 4828, 4837
AclI	AACGTT	1 cut(s)	3112
AclWI	GGATC	6 cut(s)	2701, 2714, 3054, 3702, 4625, 4727
AcoI	YGGCCR	4 cut(s)	82, 253, 2722, 4706
AcyI	GRCGYC	1 cut(s)	4669
AfaI	GTAC	1 cut(s)	3967
AfeI	AGCGCT	1 cut(s)	450
AfiI	CCNNNNNNNGG	6 cut(s)	121, 665, 721, 2699, 3884, 4299
AflIII	ACRYGT	1 cut(s)	2743
AhdI	GACNNNNNGTC	1 cut(s)	4837
AhlI	ACTAGT	1 cut(s)	4339
AjiI	CACGTC	1 cut(s)	2672
AjnI	CCWGG	2 cut(s)	156, 3790
AjuI	GAANNNNNNNTTGG	2 cut(s)	661, 693
AleI	CACNNNNGTG	1 cut(s)	1329
AloI	GAACNNNNNNTCC	2 cut(s)	3612, 3644
Alw26I	GTCTC	5 cut(s)	204, 3808, 4141, 4720, 4810
AlwI	GGATC	6 cut(s)	2701, 2714, 3054, 3702, 4625, 4727
AlwNI	CAGNNNCTG	1 cut(s)	4019
Ama87I	CYCGRG	2 cut(s)	638, 4717
Aor51HI	AGCGCT	1 cut(s)	450
AoxI	GGCC	7 cut(s)	82, 253, 723, 2722, 3434, 4706, 4774
ApeKI	GCWGC	1 cut(s)	391
Asp700I	GAANNNNTTC	6 cut(s)	647, 1349, 1493, 1709, 1853, 2953
AspLEI	GCGC	2 cut(s)	451, 4198
AspS9I	GGNCC	6 cut(s)	409, 712, 723, 3434, 3656, 4774
AsuHPI	GGTGA	9 cut(s)	236, 347, 374, 593, 596, 3509, 3554, 4574, 4607
AsuII	TTCGAA	8 cut(s)	1343, 1487, 1703, 1847, 3457, 3641, 3743, 3898
AvaI	CYCGRG	2 cut(s)	638, 4717
AvaII	GGWCC	3 cut(s)	409, 712, 3656
BalI	TGGCCA	1 cut(s)	2724
BamHI	GGATCC	1 cut(s)	2706
BanI	GGYRCC	1 cut(s)	111
BarI	GAAGNNNNNNTAC	2 cut(s)	3645, 3677
BauI	CACGAG	1 cut(s)	1648
BbsI	GAAGAC	1 cut(s)	4031
BbvI	GCAGC	1 cut(s)	403
BccI	CCATC	6 cut(s)	216, 1628, 2636, 2991, 4116, 4229
BceAI	ACGGC	2 cut(s)	120, 4931
BcgI	CGANNNNNNTGC	4 cut(s)	198, 232, 2630, 2664
BciT130I	CCWGG	2 cut(s)	158, 3792
BclI	TGATCA	3 cut(s)	2980, 4723, 4908
BcoDI	GTCTC	5 cut(s)	204, 3808, 4141, 4720, 4810
BcuI	ACTAGT	1 cut(s)	4339
BfmI	CTRYAG	1 cut(s)	3555
BfoI	RGCGCY	1 cut(s)	452
BglII	AGATCT	4 cut(s)	484, 559, 1735, 3190
BisI	GCNGC	1 cut(s)	392
BlsI	GCNGC	1 cut(s)	393
Bme1390I	CCNGG	2 cut(s)	158, 3792
Bme18I	GGWCC	3 cut(s)	409, 712, 3656
BmeRI	GACNNNNNGTC	1 cut(s)	4837
BmeT110I	CYCGRG	2 cut(s)	638, 4717
BmgBI	CACGTC	1 cut(s)	2672
BmgT120I	GGNCC	6 cut(s)	409, 712, 723, 3434, 3656, 4774
BmiI	GGNNCC	5 cut(s)	113, 683, 2708, 3387, 3435
BmrFI	CCNGG	2 cut(s)	158, 3792
BmrI	ACTGGG	2 cut(s)	516, 4386
BmuI	ACTGGG	2 cut(s)	516, 4386
BoxI	GACNNNNGTC	3 cut(s)	414, 2746, 3241
BpiI	GAAGAC	1 cut(s)	4031
BplI	GAGNNNNNCTC	2 cut(s)	657, 689
BpmI	CTGGAG	6 cut(s)	684, 3550, 3760, 3813, 3832, 4604
Bpu14I	TTCGAA	8 cut(s)	1343, 1487, 1703, 1847, 3457, 3641, 3743, 3898
BpuEI	CTTGAG	1 cut(s)	4345
BsaAI	YACGTR	1 cut(s)	709
BsaBI	GATNNNNATC	1 cut(s)	2985
BsaHI	GRCGYC	1 cut(s)	4669
BsaJI	CCNNGG	3 cut(s)	79, 604, 4777
BsaWI	WCCGGW	2 cut(s)	3007, 3029
BsaXI	ACNNNNNCTCC	2 cut(s)	3612, 3642
Bsc4I	CCNNNNNNNGG	6 cut(s)	121, 665, 721, 2699, 3884, 4299
Bse118I	RCCGGY	1 cut(s)	251
Bse1I	ACTGG	8 cut(s)	511, 667, 2725, 3777, 4381, 4453, 4612, 4705
Bse8I	GATNNNNATC	1 cut(s)	2985
BseBI	CCWGG	2 cut(s)	158, 3792
BseDI	CCNNGG	3 cut(s)	79, 604, 4777
BseJI	GATNNNNATC	1 cut(s)	2985
BseLI	CCNNNNNNNGG	6 cut(s)	121, 665, 721, 2699, 3884, 4299
BseMII	CTCAG	5 cut(s)	427, 707, 3056, 4167, 4628
BseNI	ACTGG	8 cut(s)	511, 667, 2725, 3777, 4381, 4453, 4612, 4705
BseRI	GAGGAG	2 cut(s)	2715, 3934
BseXI	GCAGC	1 cut(s)	403
BseYI	CCCAGC	2 cut(s)	2710, 2861
BshFI	GGCC	7 cut(s)	84, 255, 725, 2724, 3436, 4708, 4776
BshNI	GGYRCC	1 cut(s)	111
BsiHKCI	CYCGRG	2 cut(s)	638, 4717
BsiSI	CCGG	5 cut(s)	252, 3008, 3030, 3437, 4647
BslFI	GGGAC	4 cut(s)	4001, 4350, 4711, 4844
BslI	CCNNNNNNNGG	6 cut(s)	121, 665, 721, 2699, 3884, 4299
BsmAI	GTCTC	5 cut(s)	204, 3808, 4141, 4720, 4810
BsmFI	GGGAC	4 cut(s)	4001, 4350, 4711, 4844
BsmI	GAATGC	4 cut(s)	1351, 1495, 1711, 1855
BsnI	GGCC	7 cut(s)	84, 255, 725, 2724, 3436, 4708, 4776
BsoBI	CYCGRG	2 cut(s)	638, 4717
Bsp119I	TTCGAA	8 cut(s)	1343, 1487, 1703, 1847, 3457, 3641, 3743, 3898
Bsp1407I	TGTACA	1 cut(s)	3965
BspACI	CCGC	9 cut(s)	219, 1692, 3069, 3213, 3224, 3618, 4524, 4828, 4837
BspANI	GGCC	7 cut(s)	84, 255, 725, 2724, 3436, 4708, 4776
BspCNI	CTCAG	5 cut(s)	426, 708, 3057, 4166, 4627
BspLI	GGNNCC	5 cut(s)	113, 683, 2708, 3387, 3435
BspPI	GGATC	6 cut(s)	2701, 2714, 3054, 3702, 4625, 4727
BspT104I	TTCGAA	8 cut(s)	1343, 1487, 1703, 1847, 3457, 3641, 3743, 3898
BspT107I	GGYRCC	1 cut(s)	111
BsrBI	CCGCTC	1 cut(s)	3069
BsrFI	RCCGGY	1 cut(s)	251
BsrGI	TGTACA	1 cut(s)	3965
BsrI	ACTGG	8 cut(s)	511, 667, 2725, 3777, 4381, 4453, 4612, 4705
BssAI	RCCGGY	1 cut(s)	251
BssECI	CCNNGG	3 cut(s)	79, 604, 4777
BssNI	GRCGYC	1 cut(s)	4669
BssSI	CACGAG	1 cut(s)	1648
BssT1I	CCWWGG	2 cut(s)	604, 4777
Bst2BI	CACGAG	1 cut(s)	1648
Bst2UI	CCWGG	2 cut(s)	158, 3792
Bst4CI	ACNGT	1 cut(s)	215
BstACI	GRCGYC	1 cut(s)	4669
BstAPI	GCANNNNNTGC	1 cut(s)	140
BstAUI	TGTACA	1 cut(s)	3965
BstBAI	YACGTR	1 cut(s)	709
BstBI	TTCGAA	8 cut(s)	1343, 1487, 1703, 1847, 3457, 3641, 3743, 3898
BstC8I	GCNNGC	2 cut(s)	141, 4117
BstENI	CCTNNNNNAGG	1 cut(s)	663
BstH2I	RGCGCY	1 cut(s)	452
BstHHI	GCGC	2 cut(s)	451, 4198
BstMAI	GTCTC	5 cut(s)	204, 3808, 4141, 4720, 4810
BstMWI	GCNNNNNNNGC	5 cut(s)	55, 140, 337, 2730, 4834
BstNI	CCWGG	2 cut(s)	158, 3792
BstNSI	RCATGY	3 cut(s)	29, 2747, 2814
BstPAI	GACNNNNGTC	3 cut(s)	414, 2746, 3241
BstSCI	CCNGG	2 cut(s)	156, 3790
BstSFI	CTRYAG	1 cut(s)	3555
BstV1I	GCAGC	1 cut(s)	403
BstV2I	GAAGAC	1 cut(s)	4031
BstX2I	RGATCY	8 cut(s)	484, 559, 1735, 2706, 3046, 3190, 3694, 4732
BstYI	RGATCY	8 cut(s)	484, 559, 1735, 2706, 3046, 3190, 3694, 4732
BsuRI	GGCC	7 cut(s)	84, 255, 725, 2724, 3436, 4708, 4776
BtrI	CACGTC	1 cut(s)	2672
BtsI	GCAGTG	2 cut(s)	134, 235
BtsIMutI	CAGTG	3 cut(s)	134, 235, 504
Cac8I	GCNNGC	2 cut(s)	141, 4117
CaiI	CAGNNNCTG	1 cut(s)	4019
CfoI	GCGC	2 cut(s)	451, 4198
Cfr10I	RCCGGY	1 cut(s)	251
Cfr13I	GGNCC	6 cut(s)	409, 712, 723, 3434, 3656, 4774
CseI	GACGC	1 cut(s)	3672
CsiI	ACCWGGT	1 cut(s)	156
Csp6I	GTAC	1 cut(s)	3966
CspCI	CAANNNNNGTGG	2 cut(s)	4501, 4536
CviQI	GTAC	1 cut(s)	3966
DraI	TTTAAA	2 cut(s)	702, 4878
DriI	GACNNNNNGTC	1 cut(s)	4837
EaeI	YGGCCR	4 cut(s)	82, 253, 2722, 4706
Eam1105I	GACNNNNNGTC	1 cut(s)	4837
Eco130I	CCWWGG	2 cut(s)	604, 4777
Eco32I	GATATC	1 cut(s)	554
Eco47I	GGWCC	3 cut(s)	409, 712, 3656
Eco47III	AGCGCT	1 cut(s)	450
Eco88I	CYCGRG	2 cut(s)	638, 4717
EcoNI	CCTNNNNNAGG	1 cut(s)	663
EcoRI	GAATTC	2 cut(s)	3075, 3362
EcoRII	CCWGG	2 cut(s)	156, 3790
EcoRV	GATATC	1 cut(s)	554
EcoT14I	CCWWGG	2 cut(s)	604, 4777
EcoT22I	ATGCAT	1 cut(s)	4855
ErhI	CCWWGG	2 cut(s)	604, 4777
FalI	AAGNNNNNCTT	2 cut(s)	4078, 4110
FaqI	GGGAC	4 cut(s)	4001, 4350, 4711, 4844
FauI	CCCGC	2 cut(s)	4517, 4821
FbaI	TGATCA	3 cut(s)	2980, 4723, 4908
FblI	GTMKAC	1 cut(s)	4316
Fnu4HI	GCNGC	1 cut(s)	392
Fsp4HI	GCNGC	1 cut(s)	392
GlaI	GCGC	2 cut(s)	450, 4197
GluI	GCNGC	1 cut(s)	392
GsaI	CCCAGC	2 cut(s)	2714, 2865
GsuI	CTGGAG	6 cut(s)	684, 3550, 3760, 3813, 3832, 4604
HaeII	RGCGCY	1 cut(s)	452
HaeIII	GGCC	7 cut(s)	84, 255, 725, 2724, 3436, 4708, 4776
HapII	CCGG	5 cut(s)	252, 3008, 3030, 3437, 4647
HgaI	GACGC	1 cut(s)	3672
HhaI	GCGC	2 cut(s)	451, 4198
Hin1I	GRCGYC	1 cut(s)	4669
Hin6I	GCGC	2 cut(s)	449, 4196
HinP1I	GCGC	2 cut(s)	449, 4196
HindIII	AAGCTT	3 cut(s)	2884, 3970, 4680
HpaII	CCGG	5 cut(s)	252, 3008, 3030, 3437, 4647
HphI	GGTGA	9 cut(s)	236, 347, 374, 593, 596, 3509, 3554, 4574, 4607
Hpy166II	GTNNAC	8 cut(s)	235, 712, 2777, 3893, 4317, 4667, 4673, 4940
Hpy8I	GTNNAC	8 cut(s)	235, 712, 2777, 3893, 4317, 4667, 4673, 4940
HpyCH4III	ACNGT	1 cut(s)	215
HpyCH4IV	ACGT	6 cut(s)	99, 307, 708, 2671, 3112, 4669
HpyF10VI	GCNNNNNNNGC	5 cut(s)	55, 140, 337, 2730, 4834
HpySE526I	ACGT	6 cut(s)	99, 307, 708, 2671, 3112, 4669
Hsp92I	GRCGYC	1 cut(s)	4669
HspAI	GCGC	2 cut(s)	449, 4196
Ksp22I	TGATCA	3 cut(s)	2980, 4723, 4908
LmnI	GCTCC	5 cut(s)	510, 687, 774, 3921, 4623
Lsp1109I	GCAGC	1 cut(s)	403
MabI	ACCWGGT	1 cut(s)	156
MaeII	ACGT	6 cut(s)	99, 307, 708, 2671, 3112, 4669
MbiI	CCGCTC	1 cut(s)	3069
MfeI	CAATTG	6 cut(s)	42, 676, 1901, 3398, 3647, 4658
MflI	RGATCY	8 cut(s)	484, 559, 1735, 2706, 3046, 3190, 3694, 4732
MlsI	TGGCCA	1 cut(s)	2724
MluNI	TGGCCA	1 cut(s)	2724
MlyI	GAGTC	9 cut(s)	240, 2053, 2125, 2197, 2269, 2341, 2644, 3541, 4812
Mox20I	TGGCCA	1 cut(s)	2724
Mph1103I	ATGCAT	1 cut(s)	4855
MroXI	GAANNNNTTC	6 cut(s)	647, 1349, 1493, 1709, 1853, 2953
MscI	TGGCCA	1 cut(s)	2724
MslI	CAYNNNNRTG	9 cut(s)	30, 90, 1329, 1358, 1502, 1718, 1862, 3327, 4102
Msp20I	TGGCCA	1 cut(s)	2724
MspA1I	CMGCKG	1 cut(s)	3618
MspI	CCGG	5 cut(s)	252, 3008, 3030, 3437, 4647
MspR9I	CCNGG	2 cut(s)	158, 3792
MunI	CAATTG	6 cut(s)	42, 676, 1901, 3398, 3647, 4658
Mva1269I	GAATGC	4 cut(s)	1351, 1495, 1711, 1855
MvaI	CCWGG	2 cut(s)	158, 3792
MwoI	GCNNNNNNNGC	5 cut(s)	55, 140, 337, 2730, 4834
NlaIV	GGNNCC	5 cut(s)	113, 683, 2708, 3387, 3435
NmeAIII	GCCGAG	1 cut(s)	60
NsiI	ATGCAT	1 cut(s)	4855
NspI	RCATGY	3 cut(s)	29, 2747, 2814
NspV	TTCGAA	8 cut(s)	1343, 1487, 1703, 1847, 3457, 3641, 3743, 3898
OliI	CACNNNNGTG	1 cut(s)	1329
PaeR7I	CTCGAG	1 cut(s)	4717
PciI	ACATGT	1 cut(s)	2743
PctI	GAATGC	4 cut(s)	1351, 1495, 1711, 1855
PdmI	GAANNNNTTC	6 cut(s)	647, 1349, 1493, 1709, 1853, 2953
PfoI	TCCNGGA	1 cut(s)	3790
PkrI	GCNGC	1 cut(s)	393
PleI	GAGTC	9 cut(s)	239, 2053, 2125, 2197, 2269, 2341, 2643, 3540, 4811
PpsI	GAGTC	9 cut(s)	239, 2053, 2125, 2197, 2269, 2341, 2643, 3540, 4811
Ppu21I	YACGTR	1 cut(s)	709
PscI	ACATGT	1 cut(s)	2743
PshAI	GACNNNNGTC	3 cut(s)	414, 2746, 3241
PsiI	TTATAA	2 cut(s)	2688, 3260
Psp1406I	AACGTT	1 cut(s)	3112
Psp6I	CCWGG	2 cut(s)	156, 3790
PspFI	CCCAGC	2 cut(s)	2710, 2861
PspGI	CCWGG	2 cut(s)	156, 3790
PspN4I	GGNNCC	5 cut(s)	113, 683, 2708, 3387, 3435
PspPI	GGNCC	6 cut(s)	409, 712, 723, 3434, 3656, 4774
PsrI	GAACNNNNNNTAC	2 cut(s)	4300, 4332
PstNI	CAGNNNCTG	1 cut(s)	4019
PsuI	RGATCY	8 cut(s)	484, 559, 1735, 2706, 3046, 3190, 3694, 4732
RsaI	GTAC	1 cut(s)	3967
RsaNI	GTAC	1 cut(s)	3966
RseI	CAYNNNNRTG	9 cut(s)	30, 90, 1329, 1358, 1502, 1718, 1862, 3327, 4102
SatI	GCNGC	1 cut(s)	392
Sau96I	GGNCC	6 cut(s)	409, 712, 723, 3434, 3656, 4774
SchI	GAGTC	9 cut(s)	240, 2053, 2125, 2197, 2269, 2341, 2644, 3541, 4812
ScrFI	CCNGG	2 cut(s)	158, 3792
SexAI	ACCWGGT	1 cut(s)	156
SfcI	CTRYAG	1 cut(s)	3555
Sfr274I	CTCGAG	1 cut(s)	4717
SfuI	TTCGAA	8 cut(s)	1343, 1487, 1703, 1847, 3457, 3641, 3743, 3898
SinI	GGWCC	3 cut(s)	409, 712, 3656
SlaI	CTCGAG	1 cut(s)	4717
SmiMI	CAYNNNNRTG	9 cut(s)	30, 90, 1329, 1358, 1502, 1718, 1862, 3327, 4102
SmlI	CTYRAG	2 cut(s)	4360, 4717
SmoI	CTYRAG	2 cut(s)	4360, 4717
SpeI	ACTAGT	1 cut(s)	4339
SsiI	CCGC	9 cut(s)	219, 1692, 3069, 3213, 3224, 3618, 4524, 4828, 4837
SspI	AATATT	2 cut(s)	404, 906
StyD4I	CCNGG	2 cut(s)	156, 3790
StyI	CCWWGG	2 cut(s)	604, 4777
TaaI	ACNGT	1 cut(s)	215
TaiI	ACGT	6 cut(s)	102, 310, 711, 2674, 3115, 4672
TatI	WGTACW	1 cut(s)	3965
TscAI	CASTG	3 cut(s)	141, 242, 511
TseI	GCWGC	1 cut(s)	391
TspDTI	ATGAA	9 cut(s)	180, 932, 2586, 2880, 3287, 3939, 4157, 4161, 4285
TspGWI	ACGGA	1 cut(s)	4623
TspRI	CASTG	3 cut(s)	141, 242, 511
VpaK11BI	GGWCC	3 cut(s)	409, 712, 3656
XagI	CCTNNNNNAGG	1 cut(s)	663
XbaI	TCTAGA	4 cut(s)	556, 3197, 3829, 4462
XceI	RCATGY	3 cut(s)	29, 2747, 2814
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3525
XhoI	CTCGAG	1 cut(s)	4717
XmiI	GTMKAC	1 cut(s)	4316
XmnI	GAANNNNTTC	6 cut(s)	647, 1349, 1493, 1709, 1853, 2953
ZraI	GACGTC	1 cut(s)	4670
Zsp2I	ATGCAT	1 cut(s)	4855

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.