Rroxscaffold_3G00251400

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
45297505 .. 45299674
2170 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00251400.1

Sequence Viewer

Length: 1194 bp
ATGTTTTCTGAGCCGTTGTCTTCCTTCGGCGCAACGCGGGCTCCAGATTTAAGGTATGTTGACATTTCTAAGAACCTATTGTCTGGGGAGCTTCCTAATTGTTGGATGCAATTTCAAGAATTGCAAGTGTTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAATCTCTTTAGGCAATCTACAGTCAATTGGGATATTGCGTTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCAAATTAGAGATGGTTGACCTTGGCAACAATAACTTGTCGGGAAAGATACCAAAATGGATTGGCCAAAGCCTACCAAACTTGGTGATTCTACTCTTACGGTCCAATGAGTTCAATGGAATCATACCCTTCTCACTGTGCAATCTAGCCACCGTTCATGTCTTGGACCTCTCTTACAACAATATTTCAGGAGGCTTGCCACATTGCTTCAATAATATAACCGCTTTGGCTGATGACAATATTGGAGGTGGTGAAATTGTGGAACTTGTGTGGAAAGGAATAGAAAGAGAGTTTCCCAATCTTAGAGGTATGAGAAGTATTGACATTTCAAGCAACTGTTTGATTGGGGAAATTCCGCCAAGTATAGCAAGTATGACAGAGTTGAAATCTCTAAACCTGTCTAGAAACAAATTGACGGGAAAGCTTCCTGAAGACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCGGATATCTGGTAAAATTCCTACAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCACACAACAACTTGTCAGGAAGAATTCCATCAGGCACCCAACTTCAGGGTTTTAATGCTTCTCAATATATGGGAAATGATGGACTTTGTGGACCACCGCTAACACCAAATTGCTCACGAGATGGAGCAACTCAAGCTGATGATAACAAAGAACATGATAATGATGGTCTCATAAGCCTGGGATTTTTTATCAGTGTTGTGCTGGGATTCGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATCTATGTCAAAACTGCTGTGTACAAGGCAAAAAATATAACAATTTTGCTTTCTAAGAAAAGCAACCAAAAACGGATGTATATTGTACGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

397

Amino Acids

43.89

Weight (kDa)

8.34

Isoelectric Point (pI)

37.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_ComC PF24141 36 - 134 9e-08 EGF-like domain-containing protein ComC LRR domain
LRR_14 PF23598 206 - 270 1.3e-06 Leucine-rich repeat region
LRR_8 PF13855 212 - 271 2.2e-10 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 833
AccII CGCG 1 cut(s) 37
AciI CCGC 5 cut(s) 37, 477, 611, 896, 1032
AclWI GGATC 1 cut(s) 1109
AcoI YGGCCR 1 cut(s) 319
AcsI RAATTY 4 cut(s) 133, 606, 750, 822
AcuI CTGAAG 2 cut(s) 705, 827
AfaI GTAC 3 cut(s) 256, 1124, 1188
AfiI CCNNNNNNNGG 1 cut(s) 844
AflII CTTAAG 1 cut(s) 1046
AgsI TTSAA 6 cut(s) 116, 133, 370, 466, 585, 640
AjnI CCWGG 2 cut(s) 975, 1080
AluBI AGCT 4 cut(s) 91, 679, 771, 935
AluI AGCT 4 cut(s) 91, 679, 771, 935
Alw26I GTCTC 1 cut(s) 971
AlwI GGATC 1 cut(s) 1109
AoxI GGCC 1 cut(s) 319
ApoI RAATTY 4 cut(s) 133, 606, 750, 822
AspLEI GCGC 1 cut(s) 32
AspS9I GGNCC 3 cut(s) 357, 421, 890
AsuHPI GGTGA 2 cut(s) 352, 518
AvaII GGWCC 3 cut(s) 357, 421, 890
BalI TGGCCA 1 cut(s) 321
BanI GGYRCC 1 cut(s) 833
BanII GRGCYC 1 cut(s) 43
BauI CACGAG 1 cut(s) 915
BbsI GAAGAC 2 cut(s) 12, 693
BccI CCATC 6 cut(s) 262, 835, 872, 914, 956, 1018
BciT130I CCWGG 2 cut(s) 977, 1082
BcoDI GTCTC 1 cut(s) 971
BfaI CTAG 2 cut(s) 401, 657
BfmI CTRYAG 1 cut(s) 185
BfrI CTTAAG 1 cut(s) 1046
BisI GCNGC 1 cut(s) 1033
BlsI GCNGC 1 cut(s) 1034
Bme1390I CCNGG 2 cut(s) 977, 1082
Bme18I GGWCC 3 cut(s) 357, 421, 890
BmgT120I GGNCC 3 cut(s) 357, 421, 890
BmiI GGNNCC 2 cut(s) 42, 835
BmrFI CCNGG 2 cut(s) 977, 1082
BmsI GCATC 1 cut(s) 96
BpiI GAAGAC 2 cut(s) 12, 693
BpmI CTGGAG 1 cut(s) 27
BpuEI CTTGAG 1 cut(s) 915
BsaI GGTCTC 1 cut(s) 971
BsaJI CCNNGG 2 cut(s) 277, 976
BsaWI WCCGGW 1 cut(s) 735
BsaXI ACNNNNNCTCC 2 cut(s) 25, 55
Bsc4I CCNNNNNNNGG 1 cut(s) 844
Bse1I ACTGG 1 cut(s) 1018
Bse3DI GCAATG 1 cut(s) 457
BseBI CCWGG 2 cut(s) 977, 1082
BseDI CCNNGG 2 cut(s) 277, 976
BseGI GGATG 3 cut(s) 111, 1029, 1182
BseLI CCNNNNNNNGG 1 cut(s) 844
BseMI GCAATG 1 cut(s) 457
BseNI ACTGG 1 cut(s) 1018
BseYI CCCAGC 1 cut(s) 1000
Bsh1236I CGCG 1 cut(s) 37
BshFI GGCC 1 cut(s) 321
BshNI GGYRCC 1 cut(s) 833
BsiSI CCGG 1 cut(s) 736
BslI CCNNNNNNNGG 1 cut(s) 844
BsmAI GTCTC 1 cut(s) 971
BsnI GGCC 1 cut(s) 321
Bso31I GGTCTC 1 cut(s) 971
Bsp1286I GDGCHC 1 cut(s) 43
Bsp1407I TGTACA 1 cut(s) 1122
Bsp143I GATC 1 cut(s) 1101
BspACI CCGC 5 cut(s) 37, 477, 611, 896, 1032
BspANI GGCC 1 cut(s) 321
BspFNI CGCG 1 cut(s) 37
BspLI GGNNCC 2 cut(s) 42, 835
BspPI GGATC 1 cut(s) 1109
BspT107I GGYRCC 1 cut(s) 833
BspTI CTTAAG 1 cut(s) 1046
BspTNI GGTCTC 1 cut(s) 971
BsrDI GCAATG 1 cut(s) 457
BsrGI TGTACA 1 cut(s) 1122
BsrI ACTGG 1 cut(s) 1018
BssECI CCNNGG 2 cut(s) 277, 976
BssMI GATC 1 cut(s) 1101
BssSI CACGAG 1 cut(s) 915
BssT1I CCWWGG 1 cut(s) 277
Bst2BI CACGAG 1 cut(s) 915
Bst2UI CCWGG 2 cut(s) 977, 1082
Bst4CI ACNGT 7 cut(s) 189, 254, 357, 393, 409, 593, 1191
BstAFI CTTAAG 1 cut(s) 1046
BstAUI TGTACA 1 cut(s) 1122
BstC8I GCNNGC 3 cut(s) 39, 452, 769
BstDEI CTNAG 5 cut(s) 9, 69, 557, 782, 1155
BstF5I GGATG 3 cut(s) 111, 1029, 1182
BstFNI CGCG 1 cut(s) 37
BstHHI GCGC 1 cut(s) 32
BstKTI GATC 1 cut(s) 1104
BstMAI GTCTC 1 cut(s) 971
BstMBI GATC 1 cut(s) 1101
BstMWI GCNNNNNNNGC 2 cut(s) 38, 932
BstNI CCWGG 2 cut(s) 977, 1082
BstSCI CCNGG 2 cut(s) 975, 1080
BstSFI CTRYAG 1 cut(s) 185
BstUI CGCG 1 cut(s) 37
BstV2I GAAGAC 2 cut(s) 12, 693
BstX2I RGATCY 1 cut(s) 1101
BstYI RGATCY 1 cut(s) 1101
BsuRI GGCC 1 cut(s) 321
BtsCI GGATG 3 cut(s) 111, 1029, 1182
BtsIMutI CAGTG 3 cut(s) 389, 997, 1011
Cac8I GCNNGC 3 cut(s) 39, 452, 769
CfoI GCGC 1 cut(s) 32
Cfr13I GGNCC 3 cut(s) 357, 421, 890
Csp6I GTAC 3 cut(s) 255, 1123, 1187
CviAII CATG 4 cut(s) 212, 413, 700, 953
CviQI GTAC 3 cut(s) 255, 1123, 1187
DdeI CTNAG 5 cut(s) 9, 69, 557, 782, 1155
DpnI GATC 1 cut(s) 1103
DpnII GATC 1 cut(s) 1101
EaeI YGGCCR 1 cut(s) 319
EciI GGCGGA 1 cut(s) 600
Eco130I CCWWGG 1 cut(s) 277
Eco24I GRGCYC 1 cut(s) 43
Eco31I GGTCTC 1 cut(s) 971
Eco32I GATATC 1 cut(s) 741
Eco47I GGWCC 3 cut(s) 357, 421, 890
Eco57I CTGAAG 2 cut(s) 705, 827
EcoRI GAATTC 1 cut(s) 822
EcoRII CCWGG 2 cut(s) 975, 1080
EcoRV GATATC 1 cut(s) 741
EcoT14I CCWWGG 1 cut(s) 277
EcoT38I GRGCYC 1 cut(s) 43
ErhI CCWWGG 1 cut(s) 277
FaeI CATG 4 cut(s) 215, 416, 703, 956
FatI CATG 4 cut(s) 211, 412, 699, 952
FauI CCCGC 1 cut(s) 30
Fnu4HI GCNGC 1 cut(s) 1033
FokI GGATG 3 cut(s) 118, 1036, 1189
FriOI GRGCYC 1 cut(s) 43
Fsp4HI GCNGC 1 cut(s) 1033
FspBI CTAG 2 cut(s) 401, 657
GlaI GCGC 1 cut(s) 31
GluI GCNGC 1 cut(s) 1033
GsaI CCCAGC 1 cut(s) 1004
GsuI CTGGAG 1 cut(s) 27
HaeIII GGCC 1 cut(s) 321
HapII CCGG 1 cut(s) 736
HhaI GCGC 1 cut(s) 32
Hin1II CATG 4 cut(s) 215, 416, 703, 956
Hin6I GCGC 1 cut(s) 30
HinP1I GCGC 1 cut(s) 30
HincII GTYRAC 2 cut(s) 61, 274
HindII GTYRAC 2 cut(s) 61, 274
HindIII AAGCTT 1 cut(s) 677
HinfI GANTC 5 cut(s) 343, 375, 713, 1005, 1077
HpaII CCGG 1 cut(s) 736
HphI GGTGA 2 cut(s) 352, 518
Hpy166II GTNNAC 6 cut(s) 61, 209, 274, 890, 1040, 1123
Hpy188I TCNGA 2 cut(s) 10, 1076
Hpy8I GTNNAC 6 cut(s) 61, 209, 274, 890, 1040, 1123
HpyAV CCTTC 3 cut(s) 34, 249, 394
HpyCH4III ACNGT 7 cut(s) 189, 254, 357, 393, 409, 593, 1191
HpyCH4V TGCA 4 cut(s) 109, 124, 396, 1091
HpyF10VI GCNNNNNNNGC 2 cut(s) 38, 932
HpyF3I CTNAG 5 cut(s) 9, 69, 557, 782, 1155
Hsp92II CATG 4 cut(s) 215, 416, 703, 956
HspAI GCGC 1 cut(s) 30
Kzo9I GATC 1 cut(s) 1101
LmnI GCTCC 3 cut(s) 46, 88, 923
LweI GCATC 1 cut(s) 96
MaeI CTAG 2 cut(s) 401, 657
MaeIII GTNAC 2 cut(s) 695, 1009
MalI GATC 1 cut(s) 1103
MboI GATC 1 cut(s) 1101
MboII GAAGA 4 cut(s) 12, 698, 715, 831
MfeI CAATTG 1 cut(s) 192
MflI RGATCY 1 cut(s) 1101
MhlI GDGCHC 1 cut(s) 43
MlsI TGGCCA 1 cut(s) 321
MluNI TGGCCA 1 cut(s) 321
MmeI TCCRAC 2 cut(s) 83, 690
MnlI CCTC 4 cut(s) 434, 440, 494, 554
Mox20I TGGCCA 1 cut(s) 321
MscI TGGCCA 1 cut(s) 321
MseI TTAA 4 cut(s) 50, 773, 852, 1047
MslI CAYNNNNRTG 2 cut(s) 704, 957
Msp20I TGGCCA 1 cut(s) 321
MspCI CTTAAG 1 cut(s) 1046
MspI CCGG 1 cut(s) 736
MspR9I CCNGG 2 cut(s) 977, 1082
MunI CAATTG 1 cut(s) 192
MvaI CCWGG 2 cut(s) 977, 1082
MvnI CGCG 1 cut(s) 37
MwoI GCNNNNNNNGC 2 cut(s) 38, 932
NdeII GATC 1 cut(s) 1101
NlaIII CATG 4 cut(s) 215, 416, 703, 956
NlaIV GGNNCC 2 cut(s) 42, 835
NmuCI GTSAC 1 cut(s) 1009
PfeI GAWTC 5 cut(s) 343, 375, 713, 1005, 1077
PfoI TCCNGGA 1 cut(s) 1080
PkrI GCNGC 1 cut(s) 1034
Psp6I CCWGG 2 cut(s) 975, 1080
PspFI CCCAGC 1 cut(s) 1000
PspGI CCWGG 2 cut(s) 975, 1080
PspN4I GGNNCC 2 cut(s) 42, 835
PspPI GGNCC 3 cut(s) 357, 421, 890
PsuI RGATCY 1 cut(s) 1101
RsaI GTAC 3 cut(s) 256, 1124, 1188
RsaNI GTAC 3 cut(s) 255, 1123, 1187
RseI CAYNNNNRTG 2 cut(s) 704, 957
SaqAI TTAA 4 cut(s) 50, 773, 852, 1047
SatI GCNGC 1 cut(s) 1033
Sau3AI GATC 1 cut(s) 1101
Sau96I GGNCC 3 cut(s) 357, 421, 890
ScrFI CCNGG 2 cut(s) 977, 1082
SduI GDGCHC 1 cut(s) 43
SfaNI GCATC 1 cut(s) 96
SfcI CTRYAG 1 cut(s) 185
SinI GGWCC 3 cut(s) 357, 421, 890
SmiMI CAYNNNNRTG 2 cut(s) 704, 957
SmlI CTYRAG 2 cut(s) 930, 1046
SmoI CTYRAG 2 cut(s) 930, 1046
SsiI CCGC 5 cut(s) 37, 477, 611, 896, 1032
SspI AATATT 2 cut(s) 439, 496
SspMI CTAG 2 cut(s) 401, 657
StyD4I CCNGG 2 cut(s) 975, 1080
StyI CCWWGG 1 cut(s) 277
TaaI ACNGT 7 cut(s) 189, 254, 357, 393, 409, 593, 1191
TatI WGTACW 1 cut(s) 1122
TauI GCSGC 1 cut(s) 1035
TfiI GAWTC 5 cut(s) 343, 375, 713, 1005, 1077
Tru1I TTAA 4 cut(s) 50, 773, 852, 1047
Tru9I TTAA 4 cut(s) 50, 773, 852, 1047
TscAI CASTG 3 cut(s) 396, 997, 1018
TseFI GTSAC 1 cut(s) 1009
Tsp45I GTSAC 1 cut(s) 1009
TspDTI ATGAA 2 cut(s) 401, 716
TspGWI ACGGA 1 cut(s) 1189
TspRI CASTG 3 cut(s) 396, 997, 1018
Vha464I CTTAAG 1 cut(s) 1046
VpaK11BI GGWCC 3 cut(s) 357, 421, 890
XapI RAATTY 4 cut(s) 133, 606, 750, 822
XbaI TCTAGA 1 cut(s) 656
XcmI CCANNNNNNNNNTGG 1 cut(s) 265
XspI CTAG 2 cut(s) 401, 657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.