Rw7G019880

Leucine Rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000028
Physical Location & Seq
Reverse (-)
22150334 .. 22153136
2803 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019880.1

Sequence Viewer

Length: 2799 bp
ATGTTGTTCACTATAATGAGTGGTAGGCGTCCTATGCATTCTGTTTTGGTTGGGCTCCTTTGCCTCGTTATTGCCTCTGCTACTTGCTGTTCAAGTAGTGTTGGAAGCTCCAATATTATGTGCTTGGAGAGTGAAAGACATGCTCTTCTTCAGTTTAAACAAGGCCTTGTGGATGAGTCCAATGCTCTTGCCTCTTGGAAAAGTGTGAAAGATTGCTGCGAGTGGAAAGGAATAGCGTGCAACAACCATACAGGTCATGTCATCACTCTAGATCTCTCATATACTTTTTTAAGCGGTGAAATTCATCCTTCACTTCTTGAATTGCGATATCTAAATTATTTGGACCTCAGTTTAAATGCTTTTGAAGGAATGATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAACAACTGAGACTCGGAGAAGCTAATTTCAGTGGACCTGTTCCTCCCCAGCTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCAGGAACTTTGCTGTTCATTCAGAAAATCTTGAGTGGTTATCTGATCTTTCTTCCTTGAGATACCTGAACATGGTAGATGTAGATTTGTCTAAGGTTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTTACTGACAGAGCTTCAGTTATCTTGGTGTCGTCTTCCTGGTGTCAATCTAAGATCACTTTCCTTTACTAATTCTTCCACCTCTCTTCAACTCCTTGACCTCTCTTATAATAATCTTAATTCTTCAATATTTTATTGGATAGCCAATGTCAGCAGCAACTTTGTCCATATATATATCTCTTCCAACAATCTTGAAGGTCCCATCCCAGATGTCTTCACAAGTATGCTTTCTCTAGTAACACTAGATCTCTCTTCCAATCAACTTGAAGGTGGGATATCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTACTATCAAACCAATTGGCTGAAAACATTGAGGACTCTGTTGAAACCTTGTCTTGTGCTGAGAACACACTTGACACCTTGGACTTGAGTGATAATCTGTTTTGGGGGTCGTTGCCAGATTTGGCACGTTTTTCAAAATTAAGAGTGTTAGAGCTTAGCTCGAATCAATTAAATGGGTCTGTACCCGAGAGTGTAGGGCAACTCTCTAGCCTTGAATTTTTATCTCTCTCCGGGAATTCTTTGACCGGTGTCATAACAGAATCCCACTTTCTGAACCTCTCTCGTTTACAGGATTTGCGTCTTTTTGGTAATCGTTTCTTTATCAACCTGAGCTCTGATTGGAATCCACCTTTTCAACTTGATTGGTTAGACATGTCCTCTTGTAAGGTGGGCCCAACTTTTCCGGAGTGGATTCTAACGCAAACAAGTCTTACCGGTCTTTATCTCTCTAATGCTGGACTATCAGGATCATTACCTATCAACGTTTGGGATCTATTTTCTAGCATATCTACGTTAGATCTCTCCATGAACCAAATCCATGGGAAACTGCCAAATCTGTCAAGAACTAGCTTGATTTCTGTTGACTTGTCTTCCAATATGTTTTCTGGTGCATTGCCATCAATATCTCCGATGCTCCAGGAGTTGGATCTCTGGAACAACATGTTTTCTGGGCCTTTGTCTTCCTTCTGTGCAATACTGCACTCTCCAAGGATGTCTTATCTCGACTTTTCTGAGAACCTACTGTCAGGGGAGCTTCCCAATTGTTTCATGCAATTTCGAGACTTGGAAATGTTGAATCTAGGAAAGAATAAATTATTTGGAACAATACCAAGCTGGTTAGGCAATCTAAACAGAATTCGGCTATTGCGTTTACATGGAAACAACTTTTCAGGAGAAGTGCCTTCTTTAGAAAACTGTACAGATTTAGTAGTTGTTGACCTTGGGGATAATAACCTCTCTGGTCAAATACCAACATGGATGGGGCAAAGCCTAACAAATTTGGCGATTTTACGCTTACGGTCCAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCCGTCTAGCCACCATTCATGTCTTGGACCTCTCTCACAACAATATTTCGGGAGACTTGCCACATTGCTTGAATAACATAACCGCTTTGGCTGATGATTATATTAGTGAATCTATCATTTTAGAACTCGTGTGGAAGGGAATAGAAATCGAGTTTGGGGAAAATCTTGCTGGTATGAGAAGCATTGACATGTCAAGAAACTATTTGGTGGGGGAAATTCCGCAGAGTATAGCAAGTATGACAGAGTTGATTTCACTGAATCTGTCAAGAAACTATTTGACAGGAAAGCTTCCCGAAAACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGAAAAATTCCAGCAAGTTTTTCGAGACTAAACTTTCTCGGAGTCTTAGATGTATCACACAACCACTTGTCAGGAAGAATTCCGCTAGGCACCCAACTTCAGAGTTTTAATGATTCTGCATATATTGGAAATATTGGACTTTGTGGACCACCGCTGACACAAATTTGCCCAGGAGATGGAATAACTCAAGATGATGGAATCATGAGAGGCAGTGAAACTGATAACAAGGAACATGATAATGATGGTCTCATAAGCCTGGGATTCTTTATCAGTAGATTCAGTACAGTGTTGGGATTTGTCAGTGGATTCTGGATTGTCTGTGGCAGTTTACTACTGAAGAGCTCTTGGAGATACGCCTATTTCAAATTCTTGGATGATTCAAAAGATTTGATTTATGTCAAAATGGCTGTGGCTAAGGGAAAATTGCAGAGGAGCCTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

932

Amino Acids

103.13

Weight (kDa)

5.07

Isoelectric Point (pI)

40.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 43 - 81 1.4e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 100 - 311 1.7e-10 Leucine-rich repeat region
LRR_8 PF13855 264 - 320 8.7e-07 Leucine rich repeat
LRR_8 PF13855 337 - 395 3.1e-07 Leucine rich repeat
LRR_8 PF13855 360 - 420 2.6e-06 Leucine rich repeat
LRR_8 PF13855 749 - 807 2e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 732
AccB1I GGYRCC 1 cut(s) 2441
AccB7I CCANNNNNTGG 2 cut(s) 1585, 2528
AccIII TCCGGA 1 cut(s) 1345
AciI CCGC 5 cut(s) 294, 2082, 2219, 2435, 2504
AclI AACGTT 1 cut(s) 1425
AclWI GGATC 3 cut(s) 1417, 1440, 1596
AcoI YGGCCR 1 cut(s) 599
AcuI CTGAAG 4 cut(s) 134, 623, 2435, 2708
AcyI GRCGYC 1 cut(s) 28
AfaI GTAC 3 cut(s) 1125, 1861, 2635
AfiI CCNNNNNNNGG 4 cut(s) 458, 565, 1585, 2528
AflIII ACRYGT 3 cut(s) 1314, 1602, 2187
AgeI ACCGGT 2 cut(s) 1187, 1376
AjnI CCWGG 5 cut(s) 494, 661, 1578, 2521, 2607
AjuI GAANNNNNNNTTGG 2 cut(s) 2136, 2168
Alw21I GWGCWC 2 cut(s) 1277, 2696
Alw26I GTCTC 5 cut(s) 409, 1716, 2046, 2371, 2603
AlwI GGATC 3 cut(s) 1417, 1440, 1596
Ama87I CYCGRG 1 cut(s) 1127
Aor13HI TCCGGA 1 cut(s) 1345
AoxI GGCC 4 cut(s) 163, 599, 1333, 1613
ApaI GGGCCC 1 cut(s) 1337
ApeKI GCWGC 3 cut(s) 216, 777, 924
AsiGI ACCGGT 2 cut(s) 1187, 1376
AspS9I GGNCC 9 cut(s) 343, 440, 821, 1333, 1334, 1613, 1962, 2026, 2498
AsuC2I CCSGG 1 cut(s) 1174
AsuHPI GGTGA 1 cut(s) 308
AvaI CYCGRG 1 cut(s) 1127
AvaII GGWCC 6 cut(s) 343, 440, 821, 1962, 2026, 2498
BaeGI GKGCMC 1 cut(s) 1337
BalI TGGCCA 1 cut(s) 601
BanI GGYRCC 1 cut(s) 2441
BanII GRGCYC 4 cut(s) 57, 1277, 1337, 2696
BauI CACGAG 1 cut(s) 2126
BbsI GAAGAC 4 cut(s) 650, 829, 1524, 1614
Bbv12I GWGCWC 2 cut(s) 1277, 2696
BbvI GCAGC 3 cut(s) 203, 789, 936
BccI CCATC 6 cut(s) 833, 1567, 1915, 2522, 2540, 2588
BceAI ACGGC 1 cut(s) 1986
BcgI CGANNNNNNTGC 2 cut(s) 2355, 2389
BciT130I CCWGG 5 cut(s) 496, 663, 1580, 2523, 2609
BcnI CCSGG 1 cut(s) 1174
BcoDI GTCTC 5 cut(s) 409, 1716, 2046, 2371, 2603
BfaI CTAG 9 cut(s) 269, 857, 866, 1149, 1443, 1509, 1742, 2006, 2438
BglII AGATCT 3 cut(s) 271, 868, 1459
BisI GCNGC 3 cut(s) 217, 778, 925
BlpI GCTNAGC 1 cut(s) 1097
BlsI GCNGC 3 cut(s) 218, 779, 926
Bme1390I CCNGG 6 cut(s) 496, 663, 1174, 1580, 2523, 2609
Bme18I GGWCC 6 cut(s) 343, 440, 821, 1962, 2026, 2498
BmeT110I CYCGRG 1 cut(s) 1127
BmgT120I GGNCC 9 cut(s) 343, 440, 821, 1333, 1334, 1613, 1962, 2026, 2498
BmiI GGNNCC 5 cut(s) 56, 823, 1335, 2443, 2786
BmrFI CCNGG 6 cut(s) 496, 663, 1174, 1580, 2523, 2609
BmsI GCATC 1 cut(s) 1563
BoxI GACNNNNGTC 1 cut(s) 1190
BpiI GAAGAC 4 cut(s) 650, 829, 1524, 1614
BplI GAGNNNNNCTC 2 cut(s) 1085, 1117
BpmI CTGGAG 1 cut(s) 1562
Bpu10I CCTNAGC 2 cut(s) 1271, 2766
Bpu1102I GCTNAGC 1 cut(s) 1097
BpuEI CTTGAG 4 cut(s) 545, 571, 1048, 2523
BpuMI CCSGG 1 cut(s) 1174
BsaBI GATNNNNATC 1 cut(s) 1284
BsaHI GRCGYC 1 cut(s) 28
BsaI GGTCTC 1 cut(s) 2603
BsaJI CCNNGG 6 cut(s) 1020, 1480, 1649, 1882, 2521, 2608
BsaWI WCCGGW 3 cut(s) 1187, 1345, 1376
Bsc4I CCNNNNNNNGG 4 cut(s) 458, 565, 1585, 2528
Bse118I RCCGGY 2 cut(s) 1187, 1376
Bse3DI GCAATG 2 cut(s) 1553, 2062
Bse8I GATNNNNATC 1 cut(s) 1284
BseAI TCCGGA 1 cut(s) 1345
BseBI CCWGG 5 cut(s) 496, 663, 1580, 2523, 2609
BseDI CCNNGG 6 cut(s) 1020, 1480, 1649, 1882, 2521, 2608
BseGI GGATG 6 cut(s) 178, 304, 825, 1659, 1926, 2731
BseJI GATNNNNATC 1 cut(s) 1284
BseLI CCNNNNNNNGG 4 cut(s) 458, 565, 1585, 2528
BseMI GCAATG 2 cut(s) 1553, 2062
BseMII CTCAG 5 cut(s) 361, 404, 993, 1262, 1665
BseRI GAGGAG 1 cut(s) 2797
BseSI GKGCMC 1 cut(s) 1337
BseXI GCAGC 3 cut(s) 203, 789, 936
BseYI CCCAGC 1 cut(s) 453
BsgI GTGCAG 1 cut(s) 1625
BshFI GGCC 4 cut(s) 165, 601, 1335, 1615
BshNI GGYRCC 1 cut(s) 2441
BshTI ACCGGT 2 cut(s) 1187, 1376
BsiHKAI GWGCWC 2 cut(s) 1277, 2696
BsiHKCI CYCGRG 1 cut(s) 1127
BsiSI CCGG 4 cut(s) 1173, 1188, 1346, 1377
BslFI GGGAC 1 cut(s) 807
BslI CCNNNNNNNGG 4 cut(s) 458, 565, 1585, 2528
BsmAI GTCTC 5 cut(s) 409, 1716, 2046, 2371, 2603
BsmFI GGGAC 1 cut(s) 807
BsmI GAATGC 1 cut(s) 37
BsnI GGCC 4 cut(s) 165, 601, 1335, 1615
Bso31I GGTCTC 1 cut(s) 2603
BsoBI CYCGRG 1 cut(s) 1127
Bsp120I GGGCCC 1 cut(s) 1333
Bsp1286I GDGCHC 4 cut(s) 57, 1277, 1337, 2696
Bsp13I TCCGGA 1 cut(s) 1345
Bsp1407I TGTACA 1 cut(s) 1859
Bsp143I GATC 9 cut(s) 271, 487, 538, 677, 868, 1409, 1432, 1459, 1588
Bsp1720I GCTNAGC 1 cut(s) 1097
Bsp19I CCATGG 1 cut(s) 1480
BspACI CCGC 5 cut(s) 294, 2082, 2219, 2435, 2504
BspANI GGCC 4 cut(s) 165, 601, 1335, 1615
BspCNI CTCAG 5 cut(s) 360, 405, 994, 1263, 1666
BspEI TCCGGA 1 cut(s) 1345
BspHI TCATGA 1 cut(s) 2553
BspLI GGNNCC 5 cut(s) 56, 823, 1335, 2443, 2786
BspPI GGATC 3 cut(s) 1417, 1440, 1596
BspQI GCTCTTC 2 cut(s) 150, 2684
BspT107I GGYRCC 1 cut(s) 2441
BspTNI GGTCTC 1 cut(s) 2603
BsrDI GCAATG 2 cut(s) 1553, 2062
BsrFI RCCGGY 2 cut(s) 1187, 1376
BsrGI TGTACA 1 cut(s) 1859
BssAI RCCGGY 2 cut(s) 1187, 1376
BssECI CCNNGG 6 cut(s) 1020, 1480, 1649, 1882, 2521, 2608
BssMI GATC 9 cut(s) 271, 487, 538, 677, 868, 1409, 1432, 1459, 1588
BssNI GRCGYC 1 cut(s) 28
BssSI CACGAG 1 cut(s) 2126
BssT1I CCWWGG 4 cut(s) 1020, 1480, 1649, 1882
Bst2BI CACGAG 1 cut(s) 2126
Bst2UI CCWGG 5 cut(s) 496, 663, 1580, 2523, 2609
Bst4CI ACNGT 4 cut(s) 1686, 1859, 1962, 2638
Bst6I CTCTTC 5 cut(s) 150, 714, 808, 880, 2684
BstACI GRCGYC 1 cut(s) 28
BstAUI TGTACA 1 cut(s) 1859
BstC8I GCNNGC 2 cut(s) 238, 617
BstDSI CCRYGG 1 cut(s) 1480
BstF5I GGATG 6 cut(s) 178, 304, 825, 1659, 1926, 2731
BstKTI GATC 9 cut(s) 274, 490, 541, 680, 871, 1412, 1435, 1462, 1591
BstMAI GTCTC 5 cut(s) 409, 1716, 2046, 2371, 2603
BstMBI GATC 9 cut(s) 271, 487, 538, 677, 868, 1409, 1432, 1459, 1588
BstMWI GCNNNNNNNGC 2 cut(s) 34, 1782
BstNI CCWGG 5 cut(s) 496, 663, 1580, 2523, 2609
BstNSI RCATGY 4 cut(s) 143, 1318, 1606, 2191
BstPAI GACNNNNGTC 1 cut(s) 1190
BstSCI CCNGG 6 cut(s) 494, 661, 1172, 1578, 2521, 2607
BstSLI GKGCMC 1 cut(s) 1337
BstV1I GCAGC 3 cut(s) 203, 789, 936
BstV2I GAAGAC 4 cut(s) 650, 829, 1524, 1614
BstX2I RGATCY 5 cut(s) 271, 868, 1432, 1459, 1588
BstXI CCANNNNNNTGG 2 cut(s) 1481, 2351
BstYI RGATCY 5 cut(s) 271, 868, 1432, 1459, 1588
BsuRI GGCC 4 cut(s) 165, 601, 1335, 1615
BtgI CCRYGG 1 cut(s) 1480
BtsCI GGATG 6 cut(s) 178, 304, 825, 1659, 1926, 2731
BtsI GCAGTG 1 cut(s) 2569
BtsIMutI CAGTG 5 cut(s) 442, 2252, 2569, 2643, 2659
Cac8I GCNNGC 2 cut(s) 238, 617
CciI TCATGA 1 cut(s) 2553
Cfr10I RCCGGY 2 cut(s) 1187, 1376
Cfr13I GGNCC 9 cut(s) 343, 440, 821, 1333, 1334, 1613, 1962, 2026, 2498
CseI GACGC 2 cut(s) 17, 1229
Csp6I GTAC 3 cut(s) 1124, 1860, 2634
CspAI ACCGGT 2 cut(s) 1187, 1376
CspCI CAANNNNNGTGG 2 cut(s) 2049, 2084
CviQI GTAC 3 cut(s) 1124, 1860, 2634
DpnI GATC 9 cut(s) 273, 489, 540, 679, 870, 1411, 1434, 1461, 1590
DpnII GATC 9 cut(s) 271, 487, 538, 677, 868, 1409, 1432, 1459, 1588
DraI TTTAAA 2 cut(s) 157, 354
EaeI YGGCCR 1 cut(s) 599
Eam1104I CTCTTC 5 cut(s) 150, 714, 808, 880, 2684
EarI CTCTTC 5 cut(s) 150, 714, 808, 880, 2684
Ecl136II GAGCTC 2 cut(s) 1275, 2694
Eco130I CCWWGG 4 cut(s) 1020, 1480, 1649, 1882
Eco147I AGGCCT 1 cut(s) 165
Eco24I GRGCYC 4 cut(s) 57, 1277, 1337, 2696
Eco31I GGTCTC 1 cut(s) 2603
Eco32I GATATC 3 cut(s) 329, 900, 2349
Eco47I GGWCC 6 cut(s) 343, 440, 821, 1962, 2026, 2498
Eco53kI GAGCTC 2 cut(s) 1275, 2694
Eco57I CTGAAG 4 cut(s) 134, 623, 2435, 2708
Eco88I CYCGRG 1 cut(s) 1127
EcoICRI GAGCTC 2 cut(s) 1275, 2694
EcoO109I RGGNCCY 1 cut(s) 821
EcoRI GAATTC 3 cut(s) 1177, 1797, 2430
EcoRII CCWGG 5 cut(s) 494, 661, 1578, 2521, 2607
EcoRV GATATC 3 cut(s) 329, 900, 2349
EcoT14I CCWWGG 4 cut(s) 1020, 1480, 1649, 1882
EcoT22I ATGCAT 1 cut(s) 39
EcoT38I GRGCYC 4 cut(s) 57, 1277, 1337, 2696
ErhI CCWWGG 4 cut(s) 1020, 1480, 1649, 1882
FalI AAGNNNNNCTT 2 cut(s) 1642, 1674
FaqI GGGAC 1 cut(s) 807
Fnu4HI GCNGC 3 cut(s) 217, 778, 925
FokI GGATG 6 cut(s) 185, 291, 812, 1666, 1933, 2738
FriOI GRGCYC 4 cut(s) 57, 1277, 1337, 2696
Fsp4HI GCNGC 3 cut(s) 217, 778, 925
FspBI CTAG 9 cut(s) 269, 857, 866, 1149, 1443, 1509, 1742, 2006, 2438
GluI GCNGC 3 cut(s) 217, 778, 925
GsaI CCCAGC 1 cut(s) 457
GsuI CTGGAG 1 cut(s) 1562
HaeIII GGCC 4 cut(s) 165, 601, 1335, 1615
HapII CCGG 4 cut(s) 1173, 1188, 1346, 1377
HgaI GACGC 2 cut(s) 17, 1229
Hin1I GRCGYC 1 cut(s) 28
HincII GTYRAC 3 cut(s) 939, 1525, 1879
HindII GTYRAC 3 cut(s) 939, 1525, 1879
HindIII AAGCTT 1 cut(s) 2285
HpaII CCGG 4 cut(s) 1173, 1188, 1346, 1377
HphI GGTGA 1 cut(s) 308
Hpy166II GTNNAC 9 cut(s) 9, 440, 939, 1229, 1525, 1814, 1879, 2498, 2681
Hpy188I TCNGA 9 cut(s) 422, 517, 538, 1215, 1279, 1572, 1675, 2393, 2454
Hpy8I GTNNAC 9 cut(s) 9, 440, 939, 1229, 1525, 1814, 1879, 2498, 2681
HpyAV CCTTC 9 cut(s) 318, 359, 812, 884, 1636, 1854, 1999, 2128, 2798
HpyCH4III ACNGT 4 cut(s) 1686, 1859, 1962, 2638
HpyCH4IV ACGT 3 cut(s) 1069, 1425, 1454
HpyF10VI GCNNNNNNNGC 2 cut(s) 34, 1782
HpySE526I ACGT 3 cut(s) 1069, 1425, 1454
Hsp92I GRCGYC 1 cut(s) 28
Kpn2I TCCGGA 1 cut(s) 1345
Kzo9I GATC 9 cut(s) 271, 487, 538, 677, 868, 1409, 1432, 1459, 1588
LguI GCTCTTC 2 cut(s) 150, 2684
LmnI GCTCC 5 cut(s) 60, 113, 1581, 1693, 2784
Lsp1109I GCAGC 3 cut(s) 203, 789, 936
LweI GCATC 1 cut(s) 1563
MaeI CTAG 9 cut(s) 269, 857, 866, 1149, 1443, 1509, 1742, 2006, 2438
MaeII ACGT 3 cut(s) 1069, 1425, 1454
MaeIII GTNAC 2 cut(s) 859, 2303
MalI GATC 9 cut(s) 273, 489, 540, 679, 870, 1411, 1434, 1461, 1590
MboI GATC 9 cut(s) 271, 487, 538, 677, 868, 1409, 1432, 1459, 1588
MfeI CAATTG 3 cut(s) 401, 956, 1702
MflI RGATCY 5 cut(s) 271, 868, 1432, 1459, 1588
MhlI GDGCHC 4 cut(s) 57, 1277, 1337, 2696
MlsI TGGCCA 1 cut(s) 601
MluNI TGGCCA 1 cut(s) 601
MlyI GAGTC 6 cut(s) 185, 406, 411, 941, 971, 2403
MmeI TCCRAC 4 cut(s) 82, 831, 1566, 2298
Mox20I TGGCCA 1 cut(s) 601
Mph1103I ATGCAT 1 cut(s) 39
MroI TCCGGA 1 cut(s) 1345
MscI TGGCCA 1 cut(s) 601
MseI TTAA 9 cut(s) 156, 290, 353, 611, 741, 1082, 1112, 1974, 2460
MslI CAYNNNNRTG 5 cut(s) 14, 845, 2186, 2312, 2589
Msp20I TGGCCA 1 cut(s) 601
MspA1I CMGCKG 1 cut(s) 2506
MspI CCGG 4 cut(s) 1173, 1188, 1346, 1377
MspR9I CCNGG 6 cut(s) 496, 663, 1174, 1580, 2523, 2609
MssI GTTTAAAC 1 cut(s) 157
MunI CAATTG 3 cut(s) 401, 956, 1702
Mva1269I GAATGC 1 cut(s) 37
MvaI CCWGG 5 cut(s) 496, 663, 1580, 2523, 2609
MwoI GCNNNNNNNGC 2 cut(s) 34, 1782
NciI CCSGG 1 cut(s) 1174
NcoI CCATGG 1 cut(s) 1480
NdeII GATC 9 cut(s) 271, 487, 538, 677, 868, 1409, 1432, 1459, 1588
NlaIV GGNNCC 5 cut(s) 56, 823, 1335, 2443, 2786
NsiI ATGCAT 1 cut(s) 39
NspI RCATGY 4 cut(s) 143, 1318, 1606, 2191
PagI TCATGA 1 cut(s) 2553
PceI AGGCCT 1 cut(s) 165
PciI ACATGT 3 cut(s) 1314, 1602, 2187
PciSI GCTCTTC 2 cut(s) 150, 2684
PcsI WCGNNNNNNNCGW 1 cut(s) 1807
PctI GAATGC 1 cut(s) 37
PflMI CCANNNNNTGG 2 cut(s) 1585, 2528
PfoI TCCNGGA 3 cut(s) 494, 1172, 1578
PinAI ACCGGT 2 cut(s) 1187, 1376
PkrI GCNGC 3 cut(s) 218, 779, 926
PleI GAGTC 6 cut(s) 184, 405, 411, 940, 971, 2402
PmeI GTTTAAAC 1 cut(s) 157
PpsI GAGTC 6 cut(s) 184, 405, 411, 940, 971, 2402
PpuMI RGGWCCY 1 cut(s) 821
PscI ACATGT 3 cut(s) 1314, 1602, 2187
PshAI GACNNNNGTC 1 cut(s) 1190
PsiI TTATAA 1 cut(s) 732
Psp124BI GAGCTC 2 cut(s) 1277, 2696
Psp1406I AACGTT 1 cut(s) 1425
Psp5II RGGWCCY 1 cut(s) 821
Psp6I CCWGG 5 cut(s) 494, 661, 1578, 2521, 2607
PspFI CCCAGC 1 cut(s) 453
PspGI CCWGG 5 cut(s) 494, 661, 1578, 2521, 2607
PspN4I GGNNCC 5 cut(s) 56, 823, 1335, 2443, 2786
PspOMI GGGCCC 1 cut(s) 1333
PspPI GGNCC 9 cut(s) 343, 440, 821, 1333, 1334, 1613, 1962, 2026, 2498
PspPPI RGGWCCY 1 cut(s) 821
PsuI RGATCY 5 cut(s) 271, 868, 1432, 1459, 1588
RsaI GTAC 3 cut(s) 1125, 1861, 2635
RsaNI GTAC 3 cut(s) 1124, 1860, 2634
RseI CAYNNNNRTG 5 cut(s) 14, 845, 2186, 2312, 2589
SacI GAGCTC 2 cut(s) 1277, 2696
SapI GCTCTTC 2 cut(s) 150, 2684
SaqAI TTAA 9 cut(s) 156, 290, 353, 611, 741, 1082, 1112, 1974, 2460
SatI GCNGC 3 cut(s) 217, 778, 925
Sau3AI GATC 9 cut(s) 271, 487, 538, 677, 868, 1409, 1432, 1459, 1588
Sau96I GGNCC 9 cut(s) 343, 440, 821, 1333, 1334, 1613, 1962, 2026, 2498
SchI GAGTC 6 cut(s) 185, 406, 411, 941, 971, 2403
ScrFI CCNGG 6 cut(s) 496, 663, 1174, 1580, 2523, 2609
SduI GDGCHC 4 cut(s) 57, 1277, 1337, 2696
SfaNI GCATC 1 cut(s) 1563
SinI GGWCC 6 cut(s) 343, 440, 821, 1962, 2026, 2498
SmiMI CAYNNNNRTG 5 cut(s) 14, 845, 2186, 2312, 2589
SmlI CTYRAG 4 cut(s) 524, 550, 1027, 2538
SmoI CTYRAG 4 cut(s) 524, 550, 1027, 2538
SseBI AGGCCT 1 cut(s) 165
SsiI CCGC 5 cut(s) 294, 2082, 2219, 2435, 2504
SspI AATATT 4 cut(s) 115, 753, 2044, 2485
SspMI CTAG 9 cut(s) 269, 857, 866, 1149, 1443, 1509, 1742, 2006, 2438
SstI GAGCTC 2 cut(s) 1277, 2696
StuI AGGCCT 1 cut(s) 165
StyD4I CCNGG 6 cut(s) 494, 661, 1172, 1578, 2521, 2607
StyI CCWWGG 4 cut(s) 1020, 1480, 1649, 1882
TaaI ACNGT 4 cut(s) 1686, 1859, 1962, 2638
TaiI ACGT 3 cut(s) 1072, 1428, 1457
TaqI TCGA 5 cut(s) 1103, 1665, 1720, 2148, 2375
TatI WGTACW 2 cut(s) 1859, 2633
Tru1I TTAA 9 cut(s) 156, 290, 353, 611, 741, 1082, 1112, 1974, 2460
Tru9I TTAA 9 cut(s) 156, 290, 353, 611, 741, 1082, 1112, 1974, 2460
TscAI CASTG 5 cut(s) 442, 2259, 2569, 2643, 2659
TseI GCWGC 3 cut(s) 216, 777, 924
TspDTI ATGAA 7 cut(s) 293, 373, 500, 1484, 1699, 2006, 2324
TspRI CASTG 5 cut(s) 442, 2259, 2569, 2643, 2659
Van91I CCANNNNNTGG 2 cut(s) 1585, 2528
VpaK11BI GGWCC 6 cut(s) 343, 440, 821, 1962, 2026, 2498
XbaI TCTAGA 1 cut(s) 268
XceI RCATGY 4 cut(s) 143, 1318, 1606, 2191
XcmI CCANNNNNNNNNTGG 1 cut(s) 2020
XspI CTAG 9 cut(s) 269, 857, 866, 1149, 1443, 1509, 1742, 2006, 2438
Zsp2I ATGCAT 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.