RchiOBHm_Chr4g0400791

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
18543473 .. 18546346
2874 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37278

Sequence Viewer

Length: 2874 bp
ATGAGTGGTAGATCATCCATACATTCTGGTTCTGTGTTGGCTCGGCTTCTATGGCTGGTCATCGTTTCGTCTGCTGCTTCCTGTTGTTGTTCCAGTGCTGCTGTGAATATCAGTACTTCTAGCGATGTTATTGTTCGGTGTATGGAGAGGGAAAAACATGCTCTTCTTCAGTTCAAACAAGGGTTGGTGGATGACTCAAATGCTCTAGCCTCTTGGGAAAGCAAGGAAGACTGCTGCGAGTGGGGAGGAGTTGCATGCGACAACCAAACAGGTCATGTCATCATGCTAGATCTCTACTATAATCTATTAGGAGGTGAGATTGGTCCCTCACTACTTGAATTGCCATATCTATATTACTTGGACCTCGGTTATAATTCTTTTAATGGAACGATTCCCAAGTCCATTGGTTCTTTGAGTCGGTTGAAAGTACTCAAACTTGCATTCAATTTTTTTAGTGGATCCATTCCTCCCCAACTTGGCAATCTATCCAATTTGCATACTCTTGATCTTTCATCGAACTCTGTTACTTTTGAAAATCTCAAGTGGGTATCTCAGCTTTCTTCCTTGAGATACTTGAACATGTCATATCTTAATTTCTCTCGTGCTGTAAATTGGCCCCAATCTATAAGCCAGCTGCCTTCTCTGATGGAGCTCCGGTTAATTTTATGTCAACTTCCTGATGTTGATATGGCATCACTTTCCTTTATTAATTCTTCCACCTCTCTGCAAGTACTTCATCTCCCTTATAATTTCCTCGGTTCTTCAGTATTTTGTTGGATAGGCAATGTCAGCAGGAACCTTGTTTCCATTGACCTACATGATAACAGGATGAAAGGTCCTATTCCAAATGCTTTCACAAACATGGATTTTCTATTATCTCTTGACCTCTCTTATAATCAACTTGAAGGTGGCATACCAAAATCCTTCCGAAGCCTATGCAGATTGGAAACATTGAATTTATTGTCAAACAATTTTTCTGACAGACTTGAACAATCTATAGGCAACTTGTCTTGTGCGCAGGATACCCTTAAGTCACTCTACTTGGGTGATAATTTGTGGTGGGGGTCATTTCCCGATGATTTAACAAGGTTTGTATCCTTGCAAGAATTGGACATTGATAATGCCACTATGAGCGGGTCGCTTCCAAAAAGTTTTCGGCAACTTTCTCAGCTCAGAACCTTGCGTCTAGGTCATAACCGGTTAAGTGGCTCATTCCCAGATGTTACAGGTCTCTCATTGTTATCAACGATAGATCTTTCCCATAATCAACTGAATGGCTCTCTACATGACAGTTTAGGTCAACTTTCCAGCCTTACAGAAATTGATCTTTCTCGAAATTCTCTGAATGTTGTCTTAACTGAAGTCCACTTCTTGAACTTGTCTCAACTACTGCATGTGGATGTTTCTTATAATCCAGCTTTTTCTTTCCGTGTGAGCTTAAGTTGGAATCCACCTTTTCAGCTTGATGAATTAAAGATGGCATCTTGCAAGGTCGGCCCTGCTTTTCCTAAATGGACTCTAACACAGAGAAGACTTTCTAGACTTGATTTGTCTAATGCTGGGATATCAGATTCAATACCTGATAATTTTTGGGATCTACCTTGCAGCTTATCTCTGTTAAATCTCTCAATCAACCAAATCCATGGAAGGTTTCCGAATCTAACATCAAGAAACTGCAGGATTTATTTAATTGATTTGAGTTCCAATCGGTTCTGTGGTGCACTCCCACCATTTCATAAAAATGTAAGTGCATTGTTGCTCTCCAAAAACAAGTTTACGGGGGACCTATCTTCCATATGTTCAACTCAAGCTCCAAGTTTGGAAATACTTGACCTTTTTTATAATCTGCTATCAGGGGAACTCCCTAATTGTTGGTTTCAATTTAAAGAACTGCTCGCGTTGAATTTGGCCAACAATAGTTTCTCTGGGAAAATACCAAGCTCATTTGGTTCTTTAGAGTCTCTTTATCAATTACAATTACAACGTAACAATTTTTCAGGTGAACTGCCTTCTCTGGAGAACTGTACGCGGTTAGTTTTGGTTGACCTCGGATTCAATAACTTATCTGGAAAGATACAAGCATGGATAGGCAGCAGCCTTAAAGAGATGTGGGTTCTACAATTAAGGTCAAACCACTTCTGTGGAAGCATTCCCTCAAGTATATGCAGTCTGCCTCTCATTCGTGTTTTGGACCTCTCTCAAAACAATATATCTGGAGTATTGCCACGTTGCCTCAACAATTTGACAGCTTTCTCTTTGGTTTCTCAAGAAGTGGATGATTTGCCAGTTCCTTCTGATTTTGTTTTACAACATATTTGGAAAGGAGCAGAGAGGGAGTATAGGCAAGACGTTAGGTATTTGAGGAGCTTTGACATTTCAAGCAATAACCTAACTGGGGTGATTCCGGAAAACATAACATATATGCTTGGGTTGCGTTCTCTTAACCTTTCAAGAAACAATTTGACTGGGCTGATTCCTGGAAAGTTTGGTCAGTTGGAGGTGCTAGAAGTTCTTGATTTGTCAAGAAACCACCTATCTGGTAGTATTCCTGATAGTTTTACGAACTTGCATTCTTTAGCTGTATTGAACTTATCGATCAACAACTTGTCAGGAAGAATTCCATCCAGCACCCAACTTCTGACTTTTATTGAATCTTCATTCGCTGGAAATGTTGGACTTTGCGGGACACAGCTAAACACAAAATGCCCAGGAGATGGACCGAGTGAAGATCCAGAAGTCACTGGTGGCGCTGAAAGTGATGGTTTCATAACCACAGGGTTTTATGTAAGCATAGAGATTGGATTCTTCACAGGATTTGTGGGAGTCTGCCTTACTTTACTGCGTAAGACTTCTTGGAGATGCAGCAGTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

957

Amino Acids

105.78

Weight (kDa)

5.76

Isoelectric Point (pI)

39.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 50 - 87 2.5e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 109 - 246 2.3e-08 Leucine-rich repeat region
LRR_8 PF13855 140 - 196 9e-06 Leucine rich repeat
LRR_8 PF13855 265 - 325 1.3e-07 Leucine rich repeat
LRR_14 PF23598 354 - 550 8.1e-12 Leucine-rich repeat region
LRR_14 PF23598 785 - 880 7.3e-06 Leucine-rich repeat region
LRR_8 PF13855 786 - 845 3.3e-12 Leucine rich repeat
LRR_8 PF13855 811 - 869 1.6e-11 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 372, 747, 894, 1410, 1842
Acc16I TGCGCA 1 cut(s) 1017
AccB7I CCANNNNNTGG 1 cut(s) 2714
AccBSI CCGCTC 1 cut(s) 1134
AccII CGCG 2 cut(s) 1898, 2029
AccIII TCCGGA 1 cut(s) 2404
AciI CCGC 3 cut(s) 1134, 2029, 2682
AclWI GGATC 4 cut(s) 453, 466, 1602, 2723
AcoI YGGCCR 1 cut(s) 1908
AcsI RAATTY 4 cut(s) 955, 1336, 1903, 2616
AcuI CTGAAG 3 cut(s) 152, 747, 1380
AfaI GTAC 4 cut(s) 115, 429, 732, 2026
AfiI CCNNNNNNNGG 3 cut(s) 476, 2395, 2714
AflII CTTAAG 2 cut(s) 1028, 1438
AflIII ACRYGT 1 cut(s) 579
AgeI ACCGGT 1 cut(s) 1197
AjnI CCWGG 2 cut(s) 2476, 2707
AjuI GAANNNNNNNTTGG 2 cut(s) 1904, 1936
AleI CACNNNNGTG 1 cut(s) 2139
AloI GAACNNNNNNTCC 2 cut(s) 788, 820
Alw21I GWGCWC 2 cut(s) 654, 1723
Alw26I GTCTC 3 cut(s) 1235, 1386, 1965
Alw44I GTGCAC 1 cut(s) 1719
AlwI GGATC 4 cut(s) 453, 466, 1602, 2723
Aor13HI TCCGGA 1 cut(s) 2404
AoxI GGCC 3 cut(s) 614, 1495, 1908
ApaLI GTGCAC 1 cut(s) 1719
ApeKI GCWGC 8 cut(s) 74, 98, 234, 634, 1605, 2091, 2094, 2862
ApoI RAATTY 4 cut(s) 955, 1336, 1903, 2616
AseI ATTAAT 1 cut(s) 708
AsiGI ACCGGT 1 cut(s) 1197
Asp700I GAANNNNTTC 1 cut(s) 1534
AspLEI GCGC 2 cut(s) 1018, 2750
AspS9I GGNCC 8 cut(s) 323, 361, 615, 836, 1496, 1783, 2191, 2717
AsuHPI GGTGA 4 cut(s) 326, 1058, 2012, 2410
AvaII GGWCC 6 cut(s) 323, 361, 836, 1783, 2191, 2717
BaeGI GKGCMC 1 cut(s) 1723
BalI TGGCCA 1 cut(s) 1910
BamHI GGATCC 1 cut(s) 458
BanII GRGCYC 1 cut(s) 654
BarI GAAGNNNNNNTAC 2 cut(s) 897, 929
BauI CACGAG 1 cut(s) 600
BbsI GAAGAC 2 cut(s) 234, 1537
Bbv12I GWGCWC 2 cut(s) 654, 1723
BbvI GCAGC 7 cut(s) 61, 85, 221, 621, 1617, 2103, 2106
BccI CCATC 5 cut(s) 640, 1471, 2629, 2708, 2753
BcgI CGANNNNNNTGC 2 cut(s) 918, 952
BciT130I CCWGG 2 cut(s) 2478, 2709
BciVI GTATCC 2 cut(s) 1015, 1105
BcoDI GTCTC 3 cut(s) 1235, 1386, 1965
BfaI CTAG 6 cut(s) 120, 206, 287, 1187, 1539, 2504
BfmI CTRYAG 2 cut(s) 996, 1675
BfoI RGCGCY 1 cut(s) 2751
BfrI CTTAAG 2 cut(s) 1028, 1438
BfuI GTATCC 2 cut(s) 1015, 1105
BglII AGATCT 2 cut(s) 289, 1252
BisI GCNGC 8 cut(s) 75, 99, 235, 635, 1606, 2092, 2095, 2863
BlsI GCNGC 8 cut(s) 76, 100, 236, 636, 1607, 2093, 2096, 2864
BmcAI AGTACT 3 cut(s) 115, 429, 732
Bme1390I CCNGG 2 cut(s) 2478, 2709
Bme18I GGWCC 6 cut(s) 323, 361, 836, 1783, 2191, 2717
BmgT120I GGNCC 8 cut(s) 323, 361, 615, 836, 1496, 1783, 2191, 2717
BmiI GGNNCC 5 cut(s) 325, 460, 617, 797, 1784
BmrFI CCNGG 2 cut(s) 2478, 2709
BmrI ACTGGG 2 cut(s) 2403, 2475
BmsI GCATC 3 cut(s) 701, 1490, 2849
BmuI ACTGGG 2 cut(s) 2403, 2475
BpiI GAAGAC 2 cut(s) 234, 1537
BpmI CTGGAG 2 cut(s) 2036, 2235
BpuEI CTTGAG 5 cut(s) 524, 586, 1791, 2140, 2250
Bsa29I ATCGAT 1 cut(s) 2594
BsaI GGTCTC 1 cut(s) 1235
BsaJI CCNNGG 5 cut(s) 364, 754, 1642, 2047, 2707
BsaWI WCCGGW 3 cut(s) 654, 1197, 2404
BsaXI ACNNNNNCTCC 6 cut(s) 641, 671, 723, 753, 1795, 1825
Bsc4I CCNNNNNNNGG 3 cut(s) 476, 2395, 2714
Bse118I RCCGGY 1 cut(s) 1197
Bse1I ACTGG 5 cut(s) 93, 2285, 2398, 2470, 2746
Bse3DI GCAATG 1 cut(s) 790
BseAI TCCGGA 1 cut(s) 2404
BseBI CCWGG 2 cut(s) 2478, 2709
BseCI ATCGAT 1 cut(s) 2594
BseDI CCNNGG 5 cut(s) 364, 754, 1642, 2047, 2707
BseGI GGATG 6 cut(s) 14, 196, 834, 1405, 2281, 2621
BseLI CCNNNNNNNGG 3 cut(s) 476, 2395, 2714
BseMI GCAATG 1 cut(s) 790
BseMII CTCAG 3 cut(s) 566, 1181, 1186
BseNI ACTGG 5 cut(s) 93, 2285, 2398, 2470, 2746
BseRI GAGGAG 2 cut(s) 261, 2377
BseSI GKGCMC 1 cut(s) 1723
BseXI GCAGC 7 cut(s) 61, 85, 221, 621, 1617, 2103, 2106
BseYI CCCAGC 1 cut(s) 1559
Bsh1236I CGCG 2 cut(s) 1898, 2029
BshFI GGCC 3 cut(s) 616, 1497, 1910
BshTI ACCGGT 1 cut(s) 1197
BshVI ATCGAT 1 cut(s) 2594
BsiHKAI GWGCWC 2 cut(s) 654, 1723
BsiSI CCGG 3 cut(s) 655, 1198, 2405
BslFI GGGAC 3 cut(s) 309, 1796, 2698
BslI CCNNNNNNNGG 3 cut(s) 476, 2395, 2714
BsmAI GTCTC 3 cut(s) 1235, 1386, 1965
BsmFI GGGAC 3 cut(s) 309, 1796, 2698
BsmI GAATGC 3 cut(s) 440, 2148, 2569
BsnI GGCC 3 cut(s) 616, 1497, 1910
Bso31I GGTCTC 1 cut(s) 1235
Bsp1286I GDGCHC 2 cut(s) 654, 1723
Bsp13I TCCGGA 1 cut(s) 2404
Bsp143I GATC 9 cut(s) 11, 289, 458, 505, 1252, 1324, 1594, 2595, 2728
Bsp19I CCATGG 1 cut(s) 1642
BspACI CCGC 3 cut(s) 1134, 2029, 2682
BspANI GGCC 3 cut(s) 616, 1497, 1910
BspCNI CTCAG 3 cut(s) 565, 1180, 1185
BspDI ATCGAT 1 cut(s) 2594
BspEI TCCGGA 1 cut(s) 2404
BspFNI CGCG 2 cut(s) 1898, 2029
BspLI GGNNCC 5 cut(s) 325, 460, 617, 797, 1784
BspMAI CTGCAG 1 cut(s) 1679
BspPI GGATC 4 cut(s) 453, 466, 1602, 2723
BspQI GCTCTTC 1 cut(s) 168
BspTI CTTAAG 2 cut(s) 1028, 1438
BspTNI GGTCTC 1 cut(s) 1235
BsrBI CCGCTC 1 cut(s) 1134
BsrDI GCAATG 1 cut(s) 790
BsrFI RCCGGY 1 cut(s) 1197
BsrI ACTGG 5 cut(s) 93, 2285, 2398, 2470, 2746
BssAI RCCGGY 1 cut(s) 1197
BssECI CCNNGG 5 cut(s) 364, 754, 1642, 2047, 2707
BssMI GATC 9 cut(s) 11, 289, 458, 505, 1252, 1324, 1594, 2595, 2728
BssSI CACGAG 1 cut(s) 600
BssT1I CCWWGG 1 cut(s) 1642
Bst2BI CACGAG 1 cut(s) 600
Bst2UI CCWGG 2 cut(s) 2478, 2709
Bst4CI ACNGT 2 cut(s) 1292, 2024
Bst6I CTCTTC 1 cut(s) 168
BstAFI CTTAAG 2 cut(s) 1028, 1438
BstC8I GCNNGC 3 cut(s) 256, 632, 1896
BstDEI CTNAG 3 cut(s) 552, 1167, 1172
BstDSI CCRYGG 1 cut(s) 1642
BstF5I GGATG 6 cut(s) 14, 196, 834, 1405, 2281, 2621
BstFNI CGCG 2 cut(s) 1898, 2029
BstH2I RGCGCY 1 cut(s) 2751
BstHHI GCGC 2 cut(s) 1018, 2750
BstKTI GATC 9 cut(s) 14, 292, 461, 508, 1255, 1327, 1597, 2598, 2731
BstMAI GTCTC 3 cut(s) 1235, 1386, 1965
BstMBI GATC 9 cut(s) 11, 289, 458, 505, 1252, 1324, 1594, 2595, 2728
BstMWI GCNNNNNNNGC 4 cut(s) 52, 789, 1494, 2431
BstNI CCWGG 2 cut(s) 2478, 2709
BstNSI RCATGY 4 cut(s) 161, 258, 583, 1397
BstSCI CCNGG 2 cut(s) 2476, 2707
BstSFI CTRYAG 2 cut(s) 996, 1675
BstSLI GKGCMC 1 cut(s) 1723
BstUI CGCG 2 cut(s) 1898, 2029
BstV1I GCAGC 7 cut(s) 61, 85, 221, 621, 1617, 2103, 2106
BstV2I GAAGAC 2 cut(s) 234, 1537
BstX2I RGATCY 5 cut(s) 289, 458, 1252, 1594, 2728
BstXI CCANNNNNNTGG 3 cut(s) 1643, 2141, 2537
BstYI RGATCY 5 cut(s) 289, 458, 1252, 1594, 2728
Bsu15I ATCGAT 1 cut(s) 2594
BsuI GTATCC 2 cut(s) 1015, 1105
BsuRI GGCC 3 cut(s) 616, 1497, 1910
BsuTUI ATCGAT 1 cut(s) 2594
BtgI CCRYGG 1 cut(s) 1642
BtgZI GCGATG 1 cut(s) 138
BtsCI GGATG 6 cut(s) 14, 196, 834, 1405, 2281, 2621
BtsI GCAGTG 1 cut(s) 2872
BtsIMutI CAGTG 3 cut(s) 100, 2739, 2872
Cac8I GCNNGC 3 cut(s) 256, 632, 1896
CfoI GCGC 2 cut(s) 1018, 2750
Cfr10I RCCGGY 1 cut(s) 1197
Cfr13I GGNCC 8 cut(s) 323, 361, 615, 836, 1496, 1783, 2191, 2717
ClaI ATCGAT 1 cut(s) 2594
CseI GACGC 1 cut(s) 1172
Csp6I GTAC 4 cut(s) 114, 428, 731, 2025
CspAI ACCGGT 1 cut(s) 1197
CviQI GTAC 4 cut(s) 114, 428, 731, 2025
DdeI CTNAG 3 cut(s) 552, 1167, 1172
DpnI GATC 9 cut(s) 13, 291, 460, 507, 1254, 1326, 1596, 2597, 2730
DpnII GATC 9 cut(s) 11, 289, 458, 505, 1252, 1324, 1594, 2595, 2728
DraI TTTAAA 1 cut(s) 1885
EaeI YGGCCR 1 cut(s) 1908
Eam1104I CTCTTC 1 cut(s) 168
EarI CTCTTC 1 cut(s) 168
Ecl136II GAGCTC 1 cut(s) 652
Eco130I CCWWGG 1 cut(s) 1642
Eco24I GRGCYC 1 cut(s) 654
Eco31I GGTCTC 1 cut(s) 1235
Eco32I GATATC 1 cut(s) 1566
Eco47I GGWCC 6 cut(s) 323, 361, 836, 1783, 2191, 2717
Eco53kI GAGCTC 1 cut(s) 652
Eco57I CTGAAG 3 cut(s) 152, 747, 1380
EcoICRI GAGCTC 1 cut(s) 652
EcoO109I RGGNCCY 2 cut(s) 836, 1783
EcoRI GAATTC 1 cut(s) 2616
EcoRII CCWGG 2 cut(s) 2476, 2707
EcoRV GATATC 1 cut(s) 1566
EcoT14I CCWWGG 1 cut(s) 1642
EcoT38I GRGCYC 1 cut(s) 654
ErhI CCWWGG 1 cut(s) 1642
FaqI GGGAC 3 cut(s) 309, 1796, 2698
FauI CCCGC 2 cut(s) 1127, 2675
FauNDI CATATG 1 cut(s) 1796
Fnu4HI GCNGC 8 cut(s) 75, 99, 235, 635, 1606, 2092, 2095, 2863
FokI GGATG 5 cut(s) 203, 841, 1412, 2288, 2608
FriOI GRGCYC 1 cut(s) 654
Fsp4HI GCNGC 8 cut(s) 75, 99, 235, 635, 1606, 2092, 2095, 2863
FspBI CTAG 6 cut(s) 120, 206, 287, 1187, 1539, 2504
FspI TGCGCA 1 cut(s) 1017
GlaI GCGC 2 cut(s) 1017, 2749
GluI GCNGC 8 cut(s) 75, 99, 235, 635, 1606, 2092, 2095, 2863
GsaI CCCAGC 1 cut(s) 1563
GsuI CTGGAG 2 cut(s) 2036, 2235
HaeII RGCGCY 1 cut(s) 2751
HaeIII GGCC 3 cut(s) 616, 1497, 1910
HapII CCGG 3 cut(s) 655, 1198, 2405
HgaI GACGC 1 cut(s) 1172
HhaI GCGC 2 cut(s) 1018, 2750
Hin6I GCGC 2 cut(s) 1016, 2748
HinP1I GCGC 2 cut(s) 1016, 2748
HincII GTYRAC 3 cut(s) 671, 1301, 2044
HindII GTYRAC 3 cut(s) 671, 1301, 2044
HpaII CCGG 3 cut(s) 655, 1198, 2405
HphI GGTGA 4 cut(s) 326, 1058, 2012, 2410
Hpy166II GTNNAC 7 cut(s) 671, 1301, 1366, 1721, 1776, 2003, 2044
Hpy8I GTNNAC 7 cut(s) 671, 1301, 1366, 1721, 1776, 2003, 2044
HpyAV CCTTC 6 cut(s) 648, 899, 934, 1641, 2019, 2301
HpyCH4III ACNGT 2 cut(s) 1292, 2024
HpyCH4IV ACGT 3 cut(s) 1984, 2227, 2349
HpyF10VI GCNNNNNNNGC 4 cut(s) 52, 789, 1494, 2431
HpyF3I CTNAG 3 cut(s) 552, 1167, 1172
HpySE526I ACGT 3 cut(s) 1984, 2227, 2349
HspAI GCGC 2 cut(s) 1016, 2748
Kpn2I TCCGGA 1 cut(s) 2404
Kzo9I GATC 9 cut(s) 11, 289, 458, 505, 1252, 1324, 1594, 2595, 2728
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 5 cut(s) 649, 657, 1816, 2324, 2364
Lsp1109I GCAGC 7 cut(s) 61, 85, 221, 621, 1617, 2103, 2106
LweI GCATC 3 cut(s) 701, 1490, 2849
MaeI CTAG 6 cut(s) 120, 206, 287, 1187, 1539, 2504
MaeII ACGT 3 cut(s) 1984, 2227, 2349
MaeIII GTNAC 5 cut(s) 523, 1032, 1222, 1985, 2737
MalI GATC 9 cut(s) 13, 291, 460, 507, 1254, 1326, 1596, 2597, 2730
MbiI CCGCTC 1 cut(s) 1134
MboI GATC 9 cut(s) 11, 289, 458, 505, 1252, 1324, 1594, 2595, 2728
MflI RGATCY 5 cut(s) 289, 458, 1252, 1594, 2728
MhlI GDGCHC 2 cut(s) 654, 1723
MlsI TGGCCA 1 cut(s) 1910
MluNI TGGCCA 1 cut(s) 1910
MlyI GAGTC 5 cut(s) 188, 424, 1510, 1967, 2832
MmeI TCCRAC 4 cut(s) 755, 1424, 2475, 2653
Mox20I TGGCCA 1 cut(s) 1910
MroI TCCGGA 1 cut(s) 2404
MroXI GAANNNNTTC 1 cut(s) 1534
MscI TGGCCA 1 cut(s) 1910
MslI CAYNNNNRTG 4 cut(s) 860, 1398, 1740, 2139
Msp20I TGGCCA 1 cut(s) 1910
MspA1I CMGCKG 1 cut(s) 634
MspCI CTTAAG 2 cut(s) 1028, 1438
MspI CCGG 3 cut(s) 655, 1198, 2405
MspR9I CCNGG 2 cut(s) 2478, 2709
Mva1269I GAATGC 3 cut(s) 440, 2148, 2569
MvaI CCWGG 2 cut(s) 2478, 2709
MvnI CGCG 2 cut(s) 1898, 2029
MwoI GCNNNNNNNGC 4 cut(s) 52, 789, 1494, 2431
NcoI CCATGG 1 cut(s) 1642
NdeI CATATG 1 cut(s) 1796
NdeII GATC 9 cut(s) 11, 289, 458, 505, 1252, 1324, 1594, 2595, 2728
NlaIV GGNNCC 5 cut(s) 325, 460, 617, 797, 1784
NmeAIII GCCGAG 1 cut(s) 22
NmuCI GTSAC 2 cut(s) 1032, 2737
NsbI TGCGCA 1 cut(s) 1017
NspI RCATGY 4 cut(s) 161, 258, 583, 1397
OliI CACNNNNGTG 1 cut(s) 2139
PaeI GCATGC 1 cut(s) 258
PciI ACATGT 1 cut(s) 579
PciSI GCTCTTC 1 cut(s) 168
PctI GAATGC 3 cut(s) 440, 2148, 2569
PdmI GAANNNNTTC 1 cut(s) 1534
PfeI GAWTC 9 cut(s) 391, 1447, 1571, 1657, 2052, 2401, 2473, 2651, 2802
PflMI CCANNNNNTGG 1 cut(s) 2714
PfoI TCCNGGA 1 cut(s) 2476
PinAI ACCGGT 1 cut(s) 1197
PkrI GCNGC 8 cut(s) 76, 100, 236, 636, 1607, 2093, 2096, 2864
PleI GAGTC 5 cut(s) 188, 423, 1510, 1966, 2831
PpsI GAGTC 5 cut(s) 188, 423, 1510, 1966, 2831
PpuMI RGGWCCY 2 cut(s) 836, 1783
PscI ACATGT 1 cut(s) 579
PshBI ATTAAT 1 cut(s) 708
PsiI TTATAA 5 cut(s) 372, 747, 894, 1410, 1842
Psp124BI GAGCTC 1 cut(s) 654
Psp5II RGGWCCY 2 cut(s) 836, 1783
Psp6I CCWGG 2 cut(s) 2476, 2707
PspFI CCCAGC 1 cut(s) 1559
PspGI CCWGG 2 cut(s) 2476, 2707
PspN4I GGNNCC 5 cut(s) 325, 460, 617, 797, 1784
PspPI GGNCC 8 cut(s) 323, 361, 615, 836, 1496, 1783, 2191, 2717
PspPPI RGGWCCY 2 cut(s) 836, 1783
PstI CTGCAG 1 cut(s) 1679
PsuI RGATCY 5 cut(s) 289, 458, 1252, 1594, 2728
PvuII CAGCTG 1 cut(s) 634
RsaI GTAC 4 cut(s) 115, 429, 732, 2026
RsaNI GTAC 4 cut(s) 114, 428, 731, 2025
RseI CAYNNNNRTG 4 cut(s) 860, 1398, 1740, 2139
SacI GAGCTC 1 cut(s) 654
SapI GCTCTTC 1 cut(s) 168
SatI GCNGC 8 cut(s) 75, 99, 235, 635, 1606, 2092, 2095, 2863
Sau3AI GATC 9 cut(s) 11, 289, 458, 505, 1252, 1324, 1594, 2595, 2728
Sau96I GGNCC 8 cut(s) 323, 361, 615, 836, 1496, 1783, 2191, 2717
ScaI AGTACT 3 cut(s) 115, 429, 732
SchI GAGTC 5 cut(s) 188, 424, 1510, 1967, 2832
ScrFI CCNGG 2 cut(s) 2478, 2709
SduI GDGCHC 2 cut(s) 654, 1723
SfaNI GCATC 3 cut(s) 701, 1490, 2849
SfcI CTRYAG 2 cut(s) 996, 1675
SinI GGWCC 6 cut(s) 323, 361, 836, 1783, 2191, 2717
SmiMI CAYNNNNRTG 4 cut(s) 860, 1398, 1740, 2139
SmlI CTYRAG 7 cut(s) 539, 565, 1028, 1438, 1806, 2155, 2265
SmoI CTYRAG 7 cut(s) 539, 565, 1028, 1438, 1806, 2155, 2265
SphI GCATGC 1 cut(s) 258
SsiI CCGC 3 cut(s) 1134, 2029, 2682
SspMI CTAG 6 cut(s) 120, 206, 287, 1187, 1539, 2504
SstI GAGCTC 1 cut(s) 654
StyD4I CCNGG 2 cut(s) 2476, 2707
StyI CCWWGG 1 cut(s) 1642
TaaI ACNGT 2 cut(s) 1292, 2024
TaiI ACGT 3 cut(s) 1987, 2230, 2352
TaqI TCGA 3 cut(s) 515, 1333, 2594
TaqII GACCGA 1 cut(s) 2734
TatI WGTACW 3 cut(s) 113, 427, 730
TfiI GAWTC 9 cut(s) 391, 1447, 1571, 1657, 2052, 2401, 2473, 2651, 2802
TscAI CASTG 3 cut(s) 100, 2746, 2872
TseFI GTSAC 2 cut(s) 1032, 2737
TseI GCWGC 8 cut(s) 74, 98, 234, 634, 1605, 2091, 2094, 2862
Tsp45I GTSAC 2 cut(s) 1032, 2737
TspDTI ATGAA 7 cut(s) 501, 725, 845, 1482, 1724, 2646, 2755
TspGWI ACGGA 1 cut(s) 1418
TspRI CASTG 3 cut(s) 100, 2746, 2872
Van91I CCANNNNNTGG 1 cut(s) 2714
Vha464I CTTAAG 2 cut(s) 1028, 1438
VneI GTGCAC 1 cut(s) 1719
VpaK11BI GGWCC 6 cut(s) 323, 361, 836, 1783, 2191, 2717
VspI ATTAAT 1 cut(s) 708
XapI RAATTY 4 cut(s) 955, 1336, 1903, 2616
XbaI TCTAGA 1 cut(s) 1538
XceI RCATGY 4 cut(s) 161, 258, 583, 1397
XmnI GAANNNNTTC 1 cut(s) 1534
XspI CTAG 6 cut(s) 120, 206, 287, 1187, 1539, 2504
ZrmI AGTACT 3 cut(s) 115, 429, 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.