Rmu_sc0003940.1_g000001

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003940.1
Physical Location & Seq
Reverse (-)
406 .. 4236
3831 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003940.1_g000001.1.cds

Sequence Viewer

Length: 3831 bp
atggagttgggaaggtggctcagacttgcttatgcaatatcaattgtgcttcttctgcatatcaacgcttccttatccctcggccaccaccatgctaacgtgacggcaaggtgcatagagagggagagggatgcactccttgctatcaaaggagacctggtggatgaatacaacctgctctcttcgtggggaagcgaagccaaaaagcgagactgttgcagatgggaaagagtccactgcgatcaccagaccggccatgttattcaacttcatctgaatggagaactgggggtgatctctttgcaaggtgagtaccctgagtatatatatgaaactttgcaaggtgaaattagtcctaaaatcattgagttgcagcatttggaatatctagacctcggtcacaataacttcaatgagagccaaattccaccggcgctcatttgttctctgtccaatttaagacacctagatctcaattccaatttcctctttgggagcaaaattctagagcttattggtaacctgaccaatttaagatatctagatctctctgatgctgtctttggagatgaatatcatcaccttggaaaccttactcacttgcagtatctcaatctcgggaggaatgacttcactcaggctgtagaaaacctcaattggctcccacatctttcttctctaaaatacctcgacctgagtttagccaatctaagtaaggtttctgattggctggaaacaataaacaagctccctgacctaagaaacttgaccttaataggatgtgatcttcctcctccaattctttccactctttctcacataaattcttccaattctcttgtaagtgttgaattgtctgaaaatccagctgtcagttcttcaatattcaaatggttgtgcaactacaataccacccttgttcatcttgacctctcttccaaccagttaagtggtgtgattcccgatgcttttgcaaacatgggctcacttacagatcttgacctctctttcaaccaattaagtggtctgattcccgatgctttcagaaacatgggctcacttaaaagtctttacctctcttccaaccaattaagtggtctgattcccgatgctttcagaaacatgggctcacttaaatgtcttgacctctattctaaccaattaagtggtctgattcccaatgctttcagaaacatgggctcacttgaacgtcttgacctctcttccaaccaattaagtggtctgattcccgatgctttcagaaacatgggctcacttgaacatcttatcctctcttccaaccaattaagtggtttgattcccgatgttttcagaaacatgagctcacttacatatcttgacctctcttccaaccaattaagtggtctgattcctgatgctttcagaaacatgagctcacatgcaagtcttgacctctcttccaaccaattaagtggtctgattcccaatgctttcagaaacatgggctcacttgaaactctttccctctcttccaaccaattaagtggtctgattcccgatacttttgcaaacatgagctcacttgcaactcttgacctctcttccaaccaattaagtggtctgattccccatgctttcgcaaacttgagctcacttgcaagttttgacctctcttccaaccaattaagtggtctgattccccatgctttcgcgaacttgagctcacttgcaagtcttgacctctcttccaaccaattaagtggtctgattccccatgctttcgcaaacatgagctcacttgaaggtcttgacctctcttccaaccaattaagtggtctgattccccatgctttcacaaacatgagctcacttgaaggtcttgacctctcttccaaccaattaagtggtccgattccccatgctttcgcaaacatgagctcacttgtaaatctggtcctctcttccaaccaattaagtggtctgattcccgatgctttcacaaacatgagctcacttgtaaatcttaatctctcttccaaccaattaagtggtttgattcccgaaagtattgggcaactgtcatcgttggaatatttagatctctctagaaattggttaagcggaaaaataccgcacagtattggacagttatcttggttgatctatataaatcttagtacaaatcgtttggaagggaatatttcagaaaatcatttctcaaaactcttttatttaaatgaggtggatttatcctataactcattgttagaattcaatgtcacttcagattggattcttccttttcaattgaattacctaagtttgaggtattgtaaggtggggccggatttcccaaaatggattcgaacccaaaataatttttacaaccttgatatgtcttatggtaacatttcagatgtccctccaagctggttctggggtctatttcctaacggttcgactatagatctgtctaacaatcaaattagaggaacattagggagttcagaggatgtaacattcaacggagttgaagttcgatttagttcgaaccagttggaaggcccaataccctcatttctatcaaaagcgacatatttggatctctctgataataaattttcagagatgacttccttcttgtgttctgcgaatgttaaaatttctaaatttcttgatctctccacaaaccatattcctggagaagttccagattgctggagacattgggtcaatctagaacttctcgatttgagtaacaattctttttctgggaaaatcccacccaatataggatgtttacttcgaatcaaaacattgaaattaaggagcaacagacttgtgggagaattgccttcatccttgaagaattgtacaagcttaaatgttattgatcttgggaacaatacgctttcaagttcagtccctgaatggttaggggtcagtctttcaaatttggttattcttatgcttcaatctaatcagtttagtggaagtttgccttcacaattatgccatctagcacgccttcaaattttggatgtctctgtgaatcaaatctctggatctataccaaaatgcctcgatagtttgacttctttggtgcaagaaggaaattcaaatctaaccatcagacattcttttaatacatctgaggccgaaccacctatgagttctctttattatgaggatgatgcaaccttcatgtggaaaggaataatgtcttcatacaaaaacactctggggctagtcaagagaattgatctctcaagcaacagattaactggggagattccaagtgaaatcactcatcttgttgggctcgtttctctgaacctttcaaggaacaatttgactgggcaaatacctccagagatcggaaagttgaagtcactagattctcttgatttgtctagaaacaagataggtggcaggattccgacaagccttgctcggatctatggacttggtgtcatggatttgtcatataacaacttgtctggtgaaattccaactggtactcagctccagagctttgatccctccttttatgctggaaatcctcaattgtgtggacttccacttgaagtttgtaatccagagggaactggtcggccaaatgtctcgagtgatcaagaagatccagatgagctcatcacaacgggcttttacataaatctgggacttggatttgctgttggattctgggttgtctgcgggagtttgatattcaagcggtcatggagatatgcatactacaacttcttgaatgctttaaatgattggctttatgtgagggtagctttgatcagacggcaattaaaggatatgcttagtggacaatcttaa

Protein Analysis

1276

Amino Acids

140.66

Weight (kDa)

5.21

Isoelectric Point (pI)

36.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 183
AccII CGCG 1 cut(s) 1694
AciI CCGC 4 cut(s) 2103, 2114, 3699, 3718
AclWI GGATC 5 cut(s) 2592, 3055, 3446, 3515, 3617
AcoI YGGCCR 3 cut(s) 82, 253, 3596
AcuI CTGAAG 1 cut(s) 2250
AfaI GTAC 4 cut(s) 314, 2161, 2857, 3502
AfiI CCNNNNNNNGG 3 cut(s) 2774, 3189, 3359
AhdI GACNNNNNGTC 2 cut(s) 2711, 3452
AjnI CCWGG 2 cut(s) 156, 2680
AloI GAACNNNNNNTCC 4 cut(s) 1272, 1304, 2502, 2534
Alw26I GTCTC 5 cut(s) 147, 204, 2698, 3031, 3610
AlwI GGATC 5 cut(s) 2592, 3055, 3446, 3515, 3617
AlwNI CAGNNNCTG 1 cut(s) 2909
Ama87I CYCGRG 2 cut(s) 617, 3607
AoxI GGCC 6 cut(s) 82, 253, 2324, 2545, 3138, 3596
ApeKI GCWGC 1 cut(s) 373
Asp700I GAANNNNTTC 1 cut(s) 629
AspLEI GCGC 1 cut(s) 436
AspS9I GGNCC 4 cut(s) 1889, 1936, 2324, 2546
AsuHPI GGTGA 6 cut(s) 236, 304, 320, 356, 572, 3497
AsuII TTCGAA 3 cut(s) 2347, 2531, 2788
AvaI CYCGRG 2 cut(s) 617, 3607
AvaII GGWCC 2 cut(s) 1889, 1936
BarI GAAGNNNNNNTAC 2 cut(s) 2535, 2567
BbsI GAAGAC 1 cut(s) 3198
BbvI GCAGC 1 cut(s) 385
BccI CCATC 3 cut(s) 216, 3006, 3119
BceAI ACGGC 2 cut(s) 120, 3812
BcgI CGANNNNNNTGC 6 cut(s) 198, 232, 953, 987, 1529, 1563
BciT130I CCWGG 2 cut(s) 158, 2682
BclI TGATCA 2 cut(s) 3613, 3789
BcoDI GTCTC 5 cut(s) 147, 204, 2698, 3031, 3610
BfmI CTRYAG 2 cut(s) 642, 2445
BfoI RGCGCY 1 cut(s) 437
BfuAI ACCTGC 1 cut(s) 183
BglII AGATCT 5 cut(s) 469, 544, 994, 2080, 2449
BisI GCNGC 1 cut(s) 374
BlsI GCNGC 1 cut(s) 375
Bme1390I CCNGG 2 cut(s) 158, 2682
Bme18I GGWCC 2 cut(s) 1889, 1936
BmeRI GACNNNNNGTC 2 cut(s) 2711, 3452
BmeT110I CYCGRG 2 cut(s) 617, 3607
BmgT120I GGNCC 4 cut(s) 1889, 1936, 2324, 2546
BmiI GGNNCC 2 cut(s) 662, 2325
BmrFI CCNGG 2 cut(s) 158, 2682
BmrI ACTGGG 3 cut(s) 296, 3276, 3348
BmsI GCATC 9 cut(s) 121, 544, 955, 1027, 1099, 1243, 1387, 1963, 3166
BmuI ACTGGG 3 cut(s) 296, 3276, 3348
BoxI GACNNNNGTC 1 cut(s) 396
BpiI GAAGAC 1 cut(s) 3198
BpmI CTGGAG 4 cut(s) 2703, 2722, 3336, 3494
Bpu14I TTCGAA 3 cut(s) 2347, 2531, 2788
BpuEI CTTGAG 3 cut(s) 1648, 1720, 3235
BsaBI GATNNNNATC 1 cut(s) 573
BsaI GGTCTC 1 cut(s) 147
BsaJI CCNNGG 3 cut(s) 79, 394, 583
BsaXI ACNNNNNCTCC 4 cut(s) 144, 174, 2502, 2532
Bsc4I CCNNNNNNNGG 3 cut(s) 2774, 3189, 3359
Bse118I RCCGGY 2 cut(s) 251, 430
Bse1I ACTGG 7 cut(s) 291, 943, 2536, 3271, 3343, 3502, 3595
Bse8I GATNNNNATC 1 cut(s) 573
BseBI CCWGG 2 cut(s) 158, 2682
BseDI CCNNGG 3 cut(s) 79, 394, 583
BseGI GGATG 8 cut(s) 136, 169, 785, 2500, 2783, 2840, 3028, 3178
BseJI GATNNNNATC 1 cut(s) 573
BseLI CCNNNNNNNGG 3 cut(s) 2774, 3189, 3359
BseMII CTCAG 6 cut(s) 34, 309, 650, 686, 3126, 3518
BseNI ACTGG 7 cut(s) 291, 943, 2536, 3271, 3343, 3502, 3595
BseRI GAGGAG 1 cut(s) 783
BseXI GCAGC 1 cut(s) 385
Bsh1236I CGCG 1 cut(s) 1694
BshFI GGCC 6 cut(s) 84, 255, 2326, 2547, 3140, 3598
BsiHKCI CYCGRG 2 cut(s) 617, 3607
BsiSI CCGG 3 cut(s) 252, 431, 2327
BslFI GGGAC 3 cut(s) 2387, 2891, 3678
BslI CCNNNNNNNGG 3 cut(s) 2774, 3189, 3359
BsmAI GTCTC 5 cut(s) 147, 204, 2698, 3031, 3610
BsmFI GGGAC 3 cut(s) 2387, 2891, 3678
BsmI GAATGC 1 cut(s) 3757
BsnI GGCC 6 cut(s) 84, 255, 2326, 2547, 3140, 3598
Bso31I GGTCTC 1 cut(s) 147
BsoBI CYCGRG 2 cut(s) 617, 3607
Bsp119I TTCGAA 3 cut(s) 2347, 2531, 2788
Bsp1407I TGTACA 1 cut(s) 2855
Bsp68I TCGCGA 1 cut(s) 1694
BspACI CCGC 4 cut(s) 2103, 2114, 3699, 3718
BspANI GGCC 6 cut(s) 84, 255, 2326, 2547, 3140, 3598
BspCNI CTCAG 6 cut(s) 33, 310, 649, 687, 3127, 3517
BspFNI CGCG 1 cut(s) 1694
BspLI GGNNCC 2 cut(s) 662, 2325
BspMI ACCTGC 1 cut(s) 183
BspPI GGATC 5 cut(s) 2592, 3055, 3446, 3515, 3617
BspT104I TTCGAA 3 cut(s) 2347, 2531, 2788
BspTNI GGTCTC 1 cut(s) 147
BsrFI RCCGGY 2 cut(s) 251, 430
BsrGI TGTACA 1 cut(s) 2855
BsrI ACTGG 7 cut(s) 291, 943, 2536, 3271, 3343, 3502, 3595
BssAI RCCGGY 2 cut(s) 251, 430
BssECI CCNNGG 3 cut(s) 79, 394, 583
BssT1I CCWWGG 1 cut(s) 583
Bst2UI CCWGG 2 cut(s) 158, 2682
Bst4CI ACNGT 5 cut(s) 215, 2061, 2120, 2130, 2438
BstAPI GCANNNNNTGC 1 cut(s) 140
BstAUI TGTACA 1 cut(s) 2855
BstBI TTCGAA 3 cut(s) 2347, 2531, 2788
BstC8I GCNNGC 1 cut(s) 3007
BstEII GGTNACC 1 cut(s) 518
BstF5I GGATG 8 cut(s) 136, 169, 785, 2500, 2783, 2840, 3028, 3178
BstFNI CGCG 1 cut(s) 1694
BstH2I RGCGCY 1 cut(s) 437
BstHHI GCGC 1 cut(s) 436
BstMAI GTCTC 5 cut(s) 147, 204, 2698, 3031, 3610
BstMWI GCNNNNNNNGC 2 cut(s) 55, 140
BstNI CCWGG 2 cut(s) 158, 2682
BstNSI RCATGY 1 cut(s) 1424
BstPAI GACNNNNGTC 1 cut(s) 396
BstPI GGTNACC 1 cut(s) 518
BstSCI CCNGG 2 cut(s) 156, 2680
BstSFI CTRYAG 2 cut(s) 642, 2445
BstUI CGCG 1 cut(s) 1694
BstV1I GCAGC 1 cut(s) 385
BstV2I GAAGAC 1 cut(s) 3198
BstX2I RGATCY 9 cut(s) 469, 544, 994, 2080, 2449, 2584, 3047, 3438, 3622
BstYI RGATCY 9 cut(s) 469, 544, 994, 2080, 2449, 2584, 3047, 3438, 3622
BsuRI GGCC 6 cut(s) 84, 255, 2326, 2547, 3140, 3598
BtsCI GGATG 8 cut(s) 136, 169, 785, 2500, 2783, 2840, 3028, 3178
BtsI GCAGTG 1 cut(s) 235
BtsIMutI CAGTG 1 cut(s) 235
BtuMI TCGCGA 1 cut(s) 1694
BveI ACCTGC 1 cut(s) 183
Cac8I GCNNGC 1 cut(s) 3007
CaiI CAGNNNCTG 1 cut(s) 2909
CfoI GCGC 1 cut(s) 436
Cfr10I RCCGGY 2 cut(s) 251, 430
Cfr13I GGNCC 4 cut(s) 1889, 1936, 2324, 2546
CsiI ACCWGGT 1 cut(s) 156
Csp6I GTAC 4 cut(s) 313, 2160, 2856, 3501
CspCI CAANNNNNGTGG 2 cut(s) 3391, 3426
CviQI GTAC 4 cut(s) 313, 2160, 2856, 3501
DraI TTTAAA 2 cut(s) 2217, 3759
DriI GACNNNNNGTC 2 cut(s) 2711, 3452
EaeI YGGCCR 3 cut(s) 82, 253, 3596
Eam1105I GACNNNNNGTC 2 cut(s) 2711, 3452
Eco130I CCWWGG 1 cut(s) 583
Eco31I GGTCTC 1 cut(s) 147
Eco32I GATATC 1 cut(s) 539
Eco47I GGWCC 2 cut(s) 1889, 1936
Eco57I CTGAAG 1 cut(s) 2250
Eco88I CYCGRG 2 cut(s) 617, 3607
Eco91I GGTNACC 1 cut(s) 518
EcoO65I GGTNACC 1 cut(s) 518
EcoRI GAATTC 1 cut(s) 2252
EcoRII CCWGG 2 cut(s) 156, 2680
EcoRV GATATC 1 cut(s) 539
EcoT14I CCWWGG 1 cut(s) 583
EcoT22I ATGCAT 1 cut(s) 3736
ErhI CCWWGG 1 cut(s) 583
FalI AAGNNNNNCTT 2 cut(s) 2968, 3000
FaqI GGGAC 3 cut(s) 2387, 2891, 3678
FauI CCCGC 1 cut(s) 3692
FbaI TGATCA 2 cut(s) 3613, 3789
Fnu4HI GCNGC 1 cut(s) 374
FokI GGATG 8 cut(s) 143, 176, 792, 2507, 2790, 2827, 3035, 3185
Fsp4HI GCNGC 1 cut(s) 374
GlaI GCGC 1 cut(s) 435
GluI GCNGC 1 cut(s) 374
GsuI CTGGAG 4 cut(s) 2703, 2722, 3336, 3494
HaeII RGCGCY 1 cut(s) 437
HaeIII GGCC 6 cut(s) 84, 255, 2326, 2547, 3140, 3598
HapII CCGG 3 cut(s) 252, 431, 2327
HhaI GCGC 1 cut(s) 436
Hin6I GCGC 1 cut(s) 434
HinP1I GCGC 1 cut(s) 434
HindIII AAGCTT 1 cut(s) 2860
HpaII CCGG 3 cut(s) 252, 431, 2327
HphI GGTGA 6 cut(s) 236, 304, 320, 356, 572, 3497
Hpy166II GTNNAC 4 cut(s) 235, 2783, 3557, 3821
Hpy8I GTNNAC 4 cut(s) 235, 2783, 3557, 3821
HpyCH4III ACNGT 5 cut(s) 215, 2061, 2120, 2130, 2438
HpyCH4IV ACGT 2 cut(s) 99, 1210
HpyF10VI GCNNNNNNNGC 2 cut(s) 55, 140
HpySE526I ACGT 2 cut(s) 99, 1210
HspAI GCGC 1 cut(s) 434
Ksp22I TGATCA 2 cut(s) 3613, 3789
LmnI GCTCC 5 cut(s) 495, 666, 753, 2811, 3513
Lsp1109I GCAGC 1 cut(s) 385
LweI GCATC 9 cut(s) 121, 544, 955, 1027, 1099, 1243, 1387, 1963, 3166
MabI ACCWGGT 1 cut(s) 156
MaeII ACGT 2 cut(s) 99, 1210
MaeIII GTNAC 8 cut(s) 100, 398, 518, 2260, 2387, 2497, 2738, 3372
MfeI CAATTG 4 cut(s) 42, 655, 2288, 3548
MflI RGATCY 9 cut(s) 469, 544, 994, 2080, 2449, 2584, 3047, 3438, 3622
MlyI GAGTC 1 cut(s) 240
Mph1103I ATGCAT 1 cut(s) 3736
MroXI GAANNNNTTC 1 cut(s) 629
MslI CAYNNNNRTG 6 cut(s) 90, 276, 1135, 1841, 1985, 2992
MspA1I CMGCKG 1 cut(s) 869
MspI CCGG 3 cut(s) 252, 431, 2327
MspR9I CCNGG 2 cut(s) 158, 2682
MunI CAATTG 4 cut(s) 42, 655, 2288, 3548
Mva1269I GAATGC 1 cut(s) 3757
MvaI CCWGG 2 cut(s) 158, 2682
MvnI CGCG 1 cut(s) 1694
MwoI GCNNNNNNNGC 2 cut(s) 55, 140
NlaIV GGNNCC 2 cut(s) 662, 2325
NmeAIII GCCGAG 1 cut(s) 60
NmuCI GTSAC 4 cut(s) 100, 398, 2260, 3372
NruI TCGCGA 1 cut(s) 1694
NsiI ATGCAT 1 cut(s) 3736
NspI RCATGY 1 cut(s) 1424
NspV TTCGAA 3 cut(s) 2347, 2531, 2788
PaeR7I CTCGAG 1 cut(s) 3607
PctI GAATGC 1 cut(s) 3757
PdmI GAANNNNTTC 1 cut(s) 629
PfoI TCCNGGA 1 cut(s) 2680
PkrI GCNGC 1 cut(s) 375
PleI GAGTC 1 cut(s) 239
PpsI GAGTC 1 cut(s) 239
PshAI GACNNNNGTC 1 cut(s) 396
Psp6I CCWGG 2 cut(s) 156, 2680
PspEI GGTNACC 1 cut(s) 518
PspGI CCWGG 2 cut(s) 156, 2680
PspN4I GGNNCC 2 cut(s) 662, 2325
PspPI GGNCC 4 cut(s) 1889, 1936, 2324, 2546
PstNI CAGNNNCTG 1 cut(s) 2909
PsuI RGATCY 9 cut(s) 469, 544, 994, 2080, 2449, 2584, 3047, 3438, 3622
PvuII CAGCTG 1 cut(s) 869
RruI TCGCGA 1 cut(s) 1694
RsaI GTAC 4 cut(s) 314, 2161, 2857, 3502
RsaNI GTAC 4 cut(s) 313, 2160, 2856, 3501
RseI CAYNNNNRTG 6 cut(s) 90, 276, 1135, 1841, 1985, 2992
SatI GCNGC 1 cut(s) 374
Sau96I GGNCC 4 cut(s) 1889, 1936, 2324, 2546
SchI GAGTC 1 cut(s) 240
ScrFI CCNGG 2 cut(s) 158, 2682
SexAI ACCWGGT 1 cut(s) 156
SfaNI GCATC 9 cut(s) 121, 544, 955, 1027, 1099, 1243, 1387, 1963, 3166
SfcI CTRYAG 2 cut(s) 642, 2445
Sfr274I CTCGAG 1 cut(s) 3607
SfuI TTCGAA 3 cut(s) 2347, 2531, 2788
SgrAI CRCCGGYG 1 cut(s) 430
SinI GGWCC 2 cut(s) 1889, 1936
SlaI CTCGAG 1 cut(s) 3607
SmiI ATTTAAAT 1 cut(s) 2217
SmiMI CAYNNNNRTG 6 cut(s) 90, 276, 1135, 1841, 1985, 2992
SmlI CTYRAG 4 cut(s) 1627, 1699, 3250, 3607
SmoI CTYRAG 4 cut(s) 1627, 1699, 3250, 3607
SsiI CCGC 4 cut(s) 2103, 2114, 3699, 3718
SspI AATATT 3 cut(s) 885, 2075, 2182
StyD4I CCNGG 2 cut(s) 156, 2680
StyI CCWWGG 1 cut(s) 583
SwaI ATTTAAAT 1 cut(s) 2217
TaaI ACNGT 5 cut(s) 215, 2061, 2120, 2130, 2438
TaiI ACGT 2 cut(s) 102, 1213
TaqI TCGA 9 cut(s) 690, 2347, 2441, 2521, 2531, 2730, 2788, 3066, 3608
TaqII GACCGA 1 cut(s) 386
TatI WGTACW 2 cut(s) 2159, 2855
TscAI CASTG 1 cut(s) 242
TseFI GTSAC 4 cut(s) 100, 398, 2260, 3372
TseI GCWGC 1 cut(s) 373
Tsp45I GTSAC 4 cut(s) 100, 398, 2260, 3372
TspDTI ATGAA 8 cut(s) 180, 260, 345, 585, 911, 2829, 3175, 3198
TspGWI ACGGA 1 cut(s) 2523
TspRI CASTG 1 cut(s) 242
VpaK11BI GGWCC 2 cut(s) 1889, 1936
XbaI TCTAGA 6 cut(s) 388, 505, 541, 2087, 2719, 3395
XceI RCATGY 1 cut(s) 1424
XcmI CCANNNNNNNNNTGG 1 cut(s) 2415
XhoI CTCGAG 1 cut(s) 3607
XmnI GAANNNNTTC 1 cut(s) 629
Zsp2I ATGCAT 1 cut(s) 3736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.