RLG00000003295

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
46809384 .. 46814287
4904 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003295

Sequence Viewer

Length: 2145 bp
ATGAGTGGTAGATCTGTGCATTCTGTTTTGGTTGGGCTTGTGTGCTTGGCCCTTGCCTCTGCTATTTGTTGTTCAAGTGTTGGAAGCTCCAACAACATTATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGAGTCCAATGCTCTTGCTTCTTGGGAAAACAAGAAAGATTGCTGCAAGTGGAGAGGAATAGCGTGCAACAACCAAACAGGTCATGTCACAAGACTTGATTTCTCCTTTATATCTTTCAATTATACTGAAGTTCCTTTAAGAGGTGAAATTAGTCATTCACTACTTGAATTGCCATATCTAAATTACTTGGACCTCAGTTATAATGATTTTGGAGGAATGATCATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGCAGATGCTAATTTTAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCAGGAACACATTTGTTAGTTTTGAGAATATTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCACATCTAGATTTGTTTGAGGCTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTCACTTACAAGAGCTCAGGTTATCTTGGTCTTAGAGTTGTTGTACTTGAGTGCAAACAAATTGTCTGAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGACACCTTGGACTTGGGTTTTAACCAATTTTGGGGATCGTTGCCAGATTTCACACGTTTCTCAAATTTAAGAGAGTTGATTCTTCTGAGGAATCAACTAAATGGGTCTGTACCCGAGAGTGTCGGGCAACTCTCTGGCCTTGAACATCTATATCTCTCCTGGAATTCTTTCACTGGTGTCATAACAGAATCCCACTTTCTAAACCTCTCTCGTTTACAGGCTTTGCTTCTTTCTAGTAATAGTTTCTCTATCAACCTGAGCTCAGATTGGAATCCACCATTTCAACTTACTTATTTACACATGTCCTTCCATAAGCTGGGCCCAGCTATTCCGAAATGGATTCTAAGGCAAACAAATCTTCGAGTTCTTTTTCTCTCTAATGCTAGTCTATCAGGATCATTACCTAATAAGTTTTGGGATCTATTTTCTGCCTTGGATTACTTAGATCTCTCTATGAACCAAATCCATGGGAAACTACCGAATCTGTCATCGACAAGCTTAGGTCATCTTAACTTGTCTTCTAATCTATTTTCTGGCGCATTGCCAACATTTTCTCCCATGCTCATTCGGTTGTATCTCTCGAATAATAGCTTTTCAGGACCCTTGTCTTCCTTATGTGCAACGCAGGCTCCAAATTTGGAGTATCTTGACCTTTCTAAGAACCTATTGTCTGGGGAGCTTCCTAATTGTTGGATGCAATTTCAAGAATTGGAAATGTTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCCCGTTAGGCAATCTACAAGGAATTGCAATATTGCGTTTACATGACAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCAGATTATTGATGGTTGACCTTGGCAACAATAACCTGTCGGGAAAGATACCACCATGGATTGGCCAAAGCCTAACAAACTTGGTGATTCTACGCTTACGGTCAAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCAGTCTAGCTGCCATTCATGTTTTGGACCTTTCTCAGAACAATATTTCAGGAGGCTTGCCACATTGCTTCAATAACATAACCTCGTTGGCAAATGATACTACAACTTATGATTTTATTGTGGAACTTGTGTGGAAAGGAATAGAAATCGGATATCTGGGTTTTAATGCTTCTCAATATATGGGAAATCTTGGACTTTGTGGACCACCGCCGACACAAAGTTGTCCAGGAAAAGGAACAGTTCAAGATGATGGAATCGCGAGAGGAACTGAAATTCATAACAAAGAGCAGGTTGATGATGGTCTCATAAGCCTAGGATTCTTTATTAGTGCATTGGTGGGATTCGTCACTGGATTTTGGATAGTCAGCTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

715

Amino Acids

78.9

Weight (kDa)

5.58

Isoelectric Point (pI)

39.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 75 9.7e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 104 - 216 3.9e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 357
Acc36I ACCTGC 1 cut(s) 2008
AccB7I CCANNNNNTGG 2 cut(s) 1063, 1652
AccII CGCG 1 cut(s) 1988
AciI CCGC 1 cut(s) 1937
AclWI GGATC 3 cut(s) 790, 1150, 1173
AcoI YGGCCR 2 cut(s) 605, 1654
AcsI RAATTY 5 cut(s) 811, 910, 1381, 1468, 2001
AcuI CTGAAG 1 cut(s) 303
AfaI GTAC 3 cut(s) 674, 858, 1591
AfiI CCNNNNNNNGG 6 cut(s) 296, 464, 778, 1063, 1652, 1961
AflII CTTAAG 1 cut(s) 2098
AflIII ACRYGT 3 cut(s) 570, 800, 1047
AjnI CCWGG 4 cut(s) 500, 905, 1954, 2132
Alw21I GWGCWC 2 cut(s) 646, 1010
Alw26I GTCTC 1 cut(s) 2036
AlwI GGATC 3 cut(s) 790, 1150, 1173
Ama87I CYCGRG 1 cut(s) 860
AoxI GGCC 6 cut(s) 48, 145, 605, 883, 1066, 1654
ApaI GGGCCC 1 cut(s) 1070
ApeKI GCWGC 2 cut(s) 198, 1739
ApoI RAATTY 5 cut(s) 811, 910, 1381, 1468, 2001
ArsI GACNNNNNNTTYG 2 cut(s) 677, 709
Asp700I GAANNNNTTC 1 cut(s) 914
AspA2I CCTAGG 1 cut(s) 2041
AspLEI GCGC 1 cut(s) 1286
AspS9I GGNCC 8 cut(s) 49, 346, 446, 1066, 1067, 1346, 1756, 1931
AsuHPI GGTGA 2 cut(s) 311, 1687
AvaI CYCGRG 1 cut(s) 860
AvaII GGWCC 5 cut(s) 346, 446, 1346, 1756, 1931
AvrII CCTAGG 1 cut(s) 2041
BaeGI GKGCMC 1 cut(s) 1070
BalI TGGCCA 2 cut(s) 607, 1656
BanII GRGCYC 3 cut(s) 646, 1010, 1070
BbsI GAAGAC 2 cut(s) 1257, 1347
Bbv12I GWGCWC 2 cut(s) 646, 1010
BbvI GCAGC 2 cut(s) 185, 1726
BccI CCATC 3 cut(s) 1597, 1973, 2021
BciT130I CCWGG 4 cut(s) 502, 907, 1956, 2134
BclI TGATCA 1 cut(s) 375
BcoDI GTCTC 1 cut(s) 2036
BfaI CTAG 5 cut(s) 581, 981, 1131, 1736, 2042
BfrI CTTAAG 1 cut(s) 2098
BfuAI ACCTGC 1 cut(s) 2008
BglI GCCNNNNNGGC 1 cut(s) 1512
BglII AGATCT 2 cut(s) 11, 1192
BisI GCNGC 2 cut(s) 199, 1740
BlnI CCTAGG 1 cut(s) 2041
BlsI GCNGC 2 cut(s) 200, 1741
Bme1390I CCNGG 4 cut(s) 502, 907, 1956, 2134
Bme18I GGWCC 5 cut(s) 346, 446, 1346, 1756, 1931
BmeT110I CYCGRG 1 cut(s) 860
BmgT120I GGNCC 8 cut(s) 49, 346, 446, 1066, 1067, 1346, 1756, 1931
BmiI GGNNCC 3 cut(s) 1068, 1348, 1377
BmrFI CCNGG 4 cut(s) 502, 907, 1956, 2134
BmsI GCATC 2 cut(s) 421, 1431
BoxI GACNNNNGTC 1 cut(s) 1351
BpiI GAAGAC 2 cut(s) 1257, 1347
BpmI CTGGAG 1 cut(s) 116
Bpu10I CCTNAGC 3 cut(s) 645, 1004, 1246
BpuEI CTTGAG 2 cut(s) 577, 697
BsaBI GATNNNNATC 1 cut(s) 1017
BsaI GGTCTC 1 cut(s) 2036
BsaJI CCNNGG 6 cut(s) 753, 1179, 1213, 1612, 1646, 2041
BsaXI ACNNNNNCTCC 4 cut(s) 1285, 1315, 1360, 1390
Bsc4I CCNNNNNNNGG 6 cut(s) 296, 464, 778, 1063, 1652, 1961
Bse1I ACTGG 3 cut(s) 133, 925, 2083
Bse3DI GCAATG 2 cut(s) 1286, 1792
Bse8I GATNNNNATC 1 cut(s) 1017
BseBI CCWGG 4 cut(s) 502, 907, 1956, 2134
BseDI CCNNGG 6 cut(s) 753, 1179, 1213, 1612, 1646, 2041
BseGI GGATG 2 cut(s) 160, 1446
BseJI GATNNNNATC 1 cut(s) 1017
BseLI CCNNNNNNNGG 6 cut(s) 296, 464, 778, 1063, 1652, 1961
BseMI GCAATG 2 cut(s) 1286, 1792
BseMII CTCAG 7 cut(s) 364, 659, 726, 824, 995, 1023, 1778
BseNI ACTGG 3 cut(s) 133, 925, 2083
BseSI GKGCMC 1 cut(s) 1070
BseXI GCAGC 2 cut(s) 185, 1726
BseYI CCCAGC 2 cut(s) 1063, 1069
BsgI GTGCAG 1 cut(s) 1750
Bsh1236I CGCG 1 cut(s) 1988
BshFI GGCC 6 cut(s) 50, 147, 607, 885, 1068, 1656
BsiHKAI GWGCWC 2 cut(s) 646, 1010
BsiHKCI CYCGRG 1 cut(s) 860
BslI CCNNNNNNNGG 6 cut(s) 296, 464, 778, 1063, 1652, 1961
BsmAI GTCTC 1 cut(s) 2036
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 6 cut(s) 50, 147, 607, 885, 1068, 1656
Bso31I GGTCTC 1 cut(s) 2036
BsoBI CYCGRG 1 cut(s) 860
Bsp120I GGGCCC 1 cut(s) 1066
Bsp1286I GDGCHC 3 cut(s) 646, 1010, 1070
Bsp143I GATC 7 cut(s) 11, 375, 493, 782, 1142, 1165, 1192
Bsp19I CCATGG 2 cut(s) 1213, 1646
Bsp68I TCGCGA 1 cut(s) 1988
BspACI CCGC 1 cut(s) 1937
BspANI GGCC 6 cut(s) 50, 147, 607, 885, 1068, 1656
BspCNI CTCAG 7 cut(s) 363, 658, 727, 825, 996, 1022, 1777
BspFNI CGCG 1 cut(s) 1988
BspLI GGNNCC 3 cut(s) 1068, 1348, 1377
BspMI ACCTGC 1 cut(s) 2008
BspPI GGATC 3 cut(s) 790, 1150, 1173
BspQI GCTCTTC 1 cut(s) 132
BspTI CTTAAG 1 cut(s) 2098
BspTNI GGTCTC 1 cut(s) 2036
BsrDI GCAATG 2 cut(s) 1286, 1792
BsrI ACTGG 3 cut(s) 133, 925, 2083
BssECI CCNNGG 6 cut(s) 753, 1179, 1213, 1612, 1646, 2041
BssMI GATC 7 cut(s) 11, 375, 493, 782, 1142, 1165, 1192
BssT1I CCWWGG 6 cut(s) 753, 1179, 1213, 1612, 1646, 2041
Bst2UI CCWGG 4 cut(s) 502, 907, 1956, 2134
Bst4CI ACNGT 3 cut(s) 1589, 1692, 1969
Bst6I CTCTTC 1 cut(s) 132
BstAFI CTTAAG 1 cut(s) 2098
BstC8I GCNNGC 5 cut(s) 123, 220, 623, 1374, 1787
BstDSI CCRYGG 2 cut(s) 1213, 1646
BstENI CCTNNNNNAGG 1 cut(s) 294
BstF5I GGATG 2 cut(s) 160, 1446
BstFNI CGCG 1 cut(s) 1988
BstHHI GCGC 1 cut(s) 1286
BstKTI GATC 7 cut(s) 14, 378, 496, 785, 1145, 1168, 1195
BstMAI GTCTC 1 cut(s) 2036
BstMBI GATC 7 cut(s) 11, 375, 493, 782, 1142, 1165, 1192
BstMWI GCNNNNNNNGC 2 cut(s) 1373, 1512
BstNI CCWGG 4 cut(s) 502, 907, 1956, 2134
BstNSI RCATGY 3 cut(s) 125, 574, 1051
BstPAI GACNNNNGTC 1 cut(s) 1351
BstSCI CCNGG 4 cut(s) 500, 905, 1954, 2132
BstSLI GKGCMC 1 cut(s) 1070
BstUI CGCG 1 cut(s) 1988
BstV1I GCAGC 2 cut(s) 185, 1726
BstV2I GAAGAC 2 cut(s) 1257, 1347
BstX2I RGATCY 3 cut(s) 11, 1165, 1192
BstXI CCANNNNNNTGG 1 cut(s) 1214
BstYI RGATCY 3 cut(s) 11, 1165, 1192
BsuRI GGCC 6 cut(s) 50, 147, 607, 885, 1068, 1656
BtgI CCRYGG 2 cut(s) 1213, 1646
BtsCI GGATG 2 cut(s) 160, 1446
BtsIMutI CAGTG 2 cut(s) 918, 2076
BtuMI TCGCGA 1 cut(s) 1988
BveI ACCTGC 1 cut(s) 2008
Cac8I GCNNGC 5 cut(s) 123, 220, 623, 1374, 1787
CfoI GCGC 1 cut(s) 1286
Cfr13I GGNCC 8 cut(s) 49, 346, 446, 1066, 1067, 1346, 1756, 1931
Csp6I GTAC 3 cut(s) 673, 857, 1590
CviAII CATG 9 cut(s) 122, 239, 571, 1048, 1214, 1306, 1547, 1647, 1748
CviQI GTAC 3 cut(s) 673, 857, 1590
DpnI GATC 7 cut(s) 13, 377, 495, 784, 1144, 1167, 1194
DpnII GATC 7 cut(s) 11, 375, 493, 782, 1142, 1165, 1192
EaeI YGGCCR 2 cut(s) 605, 1654
Eam1104I CTCTTC 1 cut(s) 132
EarI CTCTTC 1 cut(s) 132
Ecl136II GAGCTC 2 cut(s) 644, 1008
Eco130I CCWWGG 6 cut(s) 753, 1179, 1213, 1612, 1646, 2041
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 3 cut(s) 646, 1010, 1070
Eco31I GGTCTC 1 cut(s) 2036
Eco32I GATATC 1 cut(s) 1883
Eco47I GGWCC 5 cut(s) 346, 446, 1346, 1756, 1931
Eco53kI GAGCTC 2 cut(s) 644, 1008
Eco57I CTGAAG 1 cut(s) 303
Eco88I CYCGRG 1 cut(s) 860
EcoICRI GAGCTC 2 cut(s) 644, 1008
EcoNI CCTNNNNNAGG 1 cut(s) 294
EcoO109I RGGNCCY 1 cut(s) 1346
EcoRI GAATTC 1 cut(s) 910
EcoRII CCWGG 4 cut(s) 500, 905, 1954, 2132
EcoRV GATATC 1 cut(s) 1883
EcoT14I CCWWGG 6 cut(s) 753, 1179, 1213, 1612, 1646, 2041
EcoT38I GRGCYC 3 cut(s) 646, 1010, 1070
ErhI CCWWGG 6 cut(s) 753, 1179, 1213, 1612, 1646, 2041
FaeI CATG 9 cut(s) 125, 242, 574, 1051, 1217, 1309, 1550, 1650, 1751
FatI CATG 9 cut(s) 121, 238, 570, 1047, 1213, 1305, 1546, 1646, 1747
FbaI TGATCA 1 cut(s) 375
Fnu4HI GCNGC 2 cut(s) 199, 1740
FokI GGATG 2 cut(s) 167, 1453
FriOI GRGCYC 3 cut(s) 646, 1010, 1070
Fsp4HI GCNGC 2 cut(s) 199, 1740
FspBI CTAG 5 cut(s) 581, 981, 1131, 1736, 2042
GlaI GCGC 1 cut(s) 1285
GluI GCNGC 2 cut(s) 199, 1740
GsaI CCCAGC 2 cut(s) 1067, 1073
GsuI CTGGAG 1 cut(s) 116
HaeIII GGCC 6 cut(s) 50, 147, 607, 885, 1068, 1656
HhaI GCGC 1 cut(s) 1286
Hin1II CATG 9 cut(s) 125, 242, 574, 1051, 1217, 1309, 1550, 1650, 1751
Hin6I GCGC 1 cut(s) 1284
HinP1I GCGC 1 cut(s) 1284
HincII GTYRAC 1 cut(s) 1609
HindII GTYRAC 1 cut(s) 1609
HindIII AAGCTT 1 cut(s) 1243
HphI GGTGA 2 cut(s) 311, 1687
Hpy166II GTNNAC 5 cut(s) 446, 962, 1544, 1609, 1931
Hpy188I TCNGA 7 cut(s) 697, 834, 1012, 1080, 1767, 1880, 2128
Hpy8I GTNNAC 5 cut(s) 446, 962, 1544, 1609, 1931
HpyAV CCTTC 3 cut(s) 1063, 1584, 1729
HpyCH4III ACNGT 3 cut(s) 1589, 1692, 1969
HpyCH4IV ACGT 1 cut(s) 802
HpyF10VI GCNNNNNNNGC 2 cut(s) 1373, 1512
HpySE526I ACGT 1 cut(s) 802
Hsp92II CATG 9 cut(s) 125, 242, 574, 1051, 1217, 1309, 1550, 1650, 1751
HspAI GCGC 1 cut(s) 1284
Ksp22I TGATCA 1 cut(s) 375
Kzo9I GATC 7 cut(s) 11, 375, 493, 782, 1142, 1165, 1192
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 3 cut(s) 92, 1381, 1423
Lsp1109I GCAGC 2 cut(s) 185, 1726
LweI GCATC 2 cut(s) 421, 1431
MaeI CTAG 5 cut(s) 581, 981, 1131, 1736, 2042
MaeII ACGT 1 cut(s) 802
MaeIII GTNAC 3 cut(s) 241, 573, 2074
MalI GATC 7 cut(s) 13, 377, 495, 784, 1144, 1167, 1194
MboI GATC 7 cut(s) 11, 375, 493, 782, 1142, 1165, 1192
MboII GAAGA 6 cut(s) 119, 543, 821, 1097, 1257, 1347
MfeI CAATTG 1 cut(s) 407
MflI RGATCY 3 cut(s) 11, 1165, 1192
MhlI GDGCHC 3 cut(s) 646, 1010, 1070
MlsI TGGCCA 2 cut(s) 607, 1656
MluNI TGGCCA 2 cut(s) 607, 1656
MlyI GAGTC 3 cut(s) 167, 412, 704
MmeI TCCRAC 3 cut(s) 61, 114, 1418
Mox20I TGGCCA 2 cut(s) 607, 1656
MroXI GAANNNNTTC 1 cut(s) 914
MscI TGGCCA 2 cut(s) 607, 1656
MseI TTAA 9 cut(s) 293, 617, 717, 768, 815, 1257, 1704, 1893, 2099
Msp20I TGGCCA 2 cut(s) 607, 1656
MspCI CTTAAG 1 cut(s) 2098
MspR9I CCNGG 4 cut(s) 502, 907, 1956, 2134
MunI CAATTG 1 cut(s) 407
Mva1269I GAATGC 1 cut(s) 19
MvaI CCWGG 4 cut(s) 502, 907, 1956, 2134
MvnI CGCG 1 cut(s) 1988
MwoI GCNNNNNNNGC 2 cut(s) 1373, 1512
NcoI CCATGG 2 cut(s) 1213, 1646
NdeII GATC 7 cut(s) 11, 375, 493, 782, 1142, 1165, 1192
NlaIII CATG 9 cut(s) 125, 242, 574, 1051, 1217, 1309, 1550, 1650, 1751
NlaIV GGNNCC 3 cut(s) 1068, 1348, 1377
NmuCI GTSAC 3 cut(s) 241, 573, 2074
NruI TCGCGA 1 cut(s) 1988
NspI RCATGY 3 cut(s) 125, 574, 1051
PaeI GCATGC 1 cut(s) 125
PceI AGGCCT 1 cut(s) 147
PciI ACATGT 2 cut(s) 570, 1047
PciSI GCTCTTC 1 cut(s) 132
PctI GAATGC 1 cut(s) 19
PdmI GAANNNNTTC 1 cut(s) 914
PflMI CCANNNNNTGG 2 cut(s) 1063, 1652
PfoI TCCNGGA 4 cut(s) 500, 905, 1954, 2132
PkrI GCNGC 2 cut(s) 200, 1741
PleI GAGTC 3 cut(s) 166, 411, 704
PpsI GAGTC 3 cut(s) 166, 411, 704
PpuMI RGGWCCY 1 cut(s) 1346
PscI ACATGT 2 cut(s) 570, 1047
PshAI GACNNNNGTC 1 cut(s) 1351
PsiI TTATAA 1 cut(s) 357
Psp124BI GAGCTC 2 cut(s) 646, 1010
Psp5II RGGWCCY 1 cut(s) 1346
Psp6I CCWGG 4 cut(s) 500, 905, 1954, 2132
PspFI CCCAGC 2 cut(s) 1063, 1069
PspGI CCWGG 4 cut(s) 500, 905, 1954, 2132
PspN4I GGNNCC 3 cut(s) 1068, 1348, 1377
PspOMI GGGCCC 1 cut(s) 1066
PspPI GGNCC 8 cut(s) 49, 346, 446, 1066, 1067, 1346, 1756, 1931
PspPPI RGGWCCY 1 cut(s) 1346
PsuI RGATCY 3 cut(s) 11, 1165, 1192
RruI TCGCGA 1 cut(s) 1988
RsaI GTAC 3 cut(s) 674, 858, 1591
RsaNI GTAC 3 cut(s) 673, 857, 1590
SacI GAGCTC 2 cut(s) 646, 1010
SapI GCTCTTC 1 cut(s) 132
SaqAI TTAA 9 cut(s) 293, 617, 717, 768, 815, 1257, 1704, 1893, 2099
SatI GCNGC 2 cut(s) 199, 1740
Sau3AI GATC 7 cut(s) 11, 375, 493, 782, 1142, 1165, 1192
Sau96I GGNCC 8 cut(s) 49, 346, 446, 1066, 1067, 1346, 1756, 1931
SchI GAGTC 3 cut(s) 167, 412, 704
ScrFI CCNGG 4 cut(s) 502, 907, 1956, 2134
SduI GDGCHC 3 cut(s) 646, 1010, 1070
SfaNI GCATC 2 cut(s) 421, 1431
SinI GGWCC 5 cut(s) 346, 446, 1346, 1756, 1931
SmlI CTYRAG 3 cut(s) 556, 676, 2098
SmoI CTYRAG 3 cut(s) 556, 676, 2098
SphI GCATGC 1 cut(s) 125
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 1 cut(s) 1937
SspI AATATT 3 cut(s) 529, 1536, 1774
SspMI CTAG 5 cut(s) 581, 981, 1131, 1736, 2042
SstI GAGCTC 2 cut(s) 646, 1010
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 4 cut(s) 500, 905, 1954, 2132
StyI CCWWGG 6 cut(s) 753, 1179, 1213, 1612, 1646, 2041
TaaI ACNGT 3 cut(s) 1589, 1692, 1969
TaiI ACGT 1 cut(s) 805
TaqI TCGA 3 cut(s) 1108, 1238, 1328
TatI WGTACW 1 cut(s) 672
Tru1I TTAA 9 cut(s) 293, 617, 717, 768, 815, 1257, 1704, 1893, 2099
Tru9I TTAA 9 cut(s) 293, 617, 717, 768, 815, 1257, 1704, 1893, 2099
TscAI CASTG 2 cut(s) 925, 2083
TseFI GTSAC 3 cut(s) 241, 573, 2074
TseI GCWGC 2 cut(s) 198, 1739
Tsp45I GTSAC 3 cut(s) 241, 573, 2074
TspDTI ATGAA 4 cut(s) 379, 1217, 1736, 1994
TspRI CASTG 2 cut(s) 925, 2083
Van91I CCANNNNNTGG 2 cut(s) 1063, 1652
Vha464I CTTAAG 1 cut(s) 2098
VpaK11BI GGWCC 5 cut(s) 346, 446, 1346, 1756, 1931
XagI CCTNNNNNAGG 1 cut(s) 294
XapI RAATTY 5 cut(s) 811, 910, 1381, 1468, 2001
XbaI TCTAGA 1 cut(s) 580
XceI RCATGY 3 cut(s) 125, 574, 1051
XcmI CCANNNNNNNNNTGG 2 cut(s) 1600, 1750
XmaJI CCTAGG 1 cut(s) 2041
XmnI GAANNNNTTC 1 cut(s) 914
XspI CTAG 5 cut(s) 581, 981, 1131, 1736, 2042
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.