pycom01g08490

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
9388530 .. 9390314
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g08490.1

Sequence Viewer

Length: 1785 bp
ATGAGTAACACCAATCTTAGTAATGTTCATGACTGGCTAGAAATAGTTAATAAGCTCCCTAAACTTACAAACCTGTCATTATGGGGGTGTGGTCTTCCTTCTCCTGTAATCCATTCCAGTACTCTTTTTAACATAAATTCTTCAAAATCTCTTGCTCATGTTGACTTCTCTGACAACCAATGCACTTCTCCTTCAATATATTTATGGTTGTCTAACTACAATACTAGCCTTGTCCATCTTGACCTCTCTAACAACAGTTTAACTGGTTTAATTCCCAGTGTCATTGAAAACTTGACCTCTCTTGTCCATCTATATCTCTATAAGAACAAATTTGACGCGGTGAATCCGCATTCTTTTTCCAGCTTATGCAGTTTGCAAGAACTGTCCCTTGCCAATACTAGTCTGAGTGGACAATTTTCCAAGTTTGTTCAAATGTTGTCTACATGTGTTCAAAACTCGTTAGAGTATCTGTACCTCTGTGACAATCATCTTTCTGGATCGATTCCTAATCTTACAAACTTTTCATCATTGAAAGTATTATCTCTCTCTAGAAATCAATTGAGTGGAACAATATCTGAAAGTATTGGGCAACTGTCTAATCTTGAGCAAATGAACTTGGCTATGAATGCTCTGGAAGGTGTGGTTTCGGAAAGCCACTTCTCGAATCTCTCTAGATTAACATATTTGGATTTGTCATCCAACTCGCTAGTTTTAAGCTTCAATTCTAATTGGGTTCCTCCATTTAAATTGAGGTATATATATTTGGGGTCTTGCAAAATGGGTCTGTATTTTCCAAAATGGCTTCAAACTCAGAATGAGTATTCATACCTCAATATTTCTGATGCTGGAATTGTGGATGTCCTTCCAAGCTGGTTTTGGGGTACGACTCGTAACGTGCAACTTATCAGTCTTTTCAATAACCAAATTGGAGAAATGTTTCCAAATTCAACAACGAATTTTACATATTACCCTGAAATACATTTGAGTGCAAACCAAATCGAAGGTCCAATTCCCTCAACTCTATCGCATGTGTCATATTTGGATCTCTCTAGTAATAACATTTCAGGGTCAATTTCTATCTTGTGTGAAGCATACAAGAGTTTAATGTTTCTTAATCTCTCAAACAACAATCTCTCCGGAGAACTTCCACAATGCTGGACACATTTTGACCATCTAGTCATGCTTGATTTGAGTTACAATGCTTTTTACGGCAAAATTCCATCCACAGTGGGCTCACTATATCACGTGGAAACATTGAAATTAAGAAGCAACAGATTTGTTGGCGAGTTTCCTTCATCCTTAAAGAATTGCACCAGTTTAAAAGTTATTGATGTTGGATACAATCAATTATCAGGACCCATACCAAAATGGTTAAGGGTTAGCCTTCAGAAATTGGTTGTCCTGATGCTTTCCTCTAATAACTTCAACAGAAGCATGCCATCTGAACTATGCCGTCTAACAAACATTCAAAACCAGATAGATGGCAGAATTCCAACAAGCCTTGCTCAGATATACGGTCTTAGTGTCTTGGACTTGTCATACAATAACTTTATTGGCAAAATTCCAACTGGCACTCAGCTCCAAAGTTTTGATCCCTCTGATTATGCTGGAAATCCTCAGCTGTGCAAACCTCCACTTCCAAAGATCTGTGGTGATCAACAGGAAAATCCGATCTTGAGCAACGAAGAAGAAAAGGATGCACCTATAACATGGGGATTTTACATCAGCATGGCGCTATGGCGCTTGGCTTTATTGTTGGATTTTGGGGAGTTTGTGGCGGTCTGA

Protein Analysis

595

Amino Acids

66.37

Weight (kDa)

5.71

Isoelectric Point (pI)

36.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 76 - 135 1.3e-10 Leucine rich repeat
LRR_4 PF12799 153 - 191 6.1e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1175
AccI GTMKAC 1 cut(s) 440
AccII CGCG 1 cut(s) 338
AccIII TCCGGA 1 cut(s) 1136
AciI CCGC 3 cut(s) 338, 347, 1778
AclWI GGATC 3 cut(s) 505, 1050, 1586
AcsI RAATTY 7 cut(s) 136, 329, 943, 955, 1215, 1488, 1560
AcuI CTGAAG 1 cut(s) 1370
AcvI CACGTG 1 cut(s) 1246
AfaI GTAC 3 cut(s) 121, 473, 883
AflIII ACRYGT 1 cut(s) 443
AhlI ACTAGT 1 cut(s) 398
AluBI AGCT 6 cut(s) 55, 363, 717, 870, 1579, 1621
AluI AGCT 6 cut(s) 55, 363, 717, 870, 1579, 1621
AlwI GGATC 3 cut(s) 505, 1050, 1586
Aor13HI TCCGGA 1 cut(s) 1136
ApoI RAATTY 7 cut(s) 136, 329, 943, 955, 1215, 1488, 1560
ArsI GACNNNNNNTTYG 2 cut(s) 988, 1020
Asp700I GAANNNNTTC 1 cut(s) 936
AspLEI GCGC 2 cut(s) 1735, 1743
AspS9I GGNCC 2 cut(s) 1004, 1355
AsuHPI GGTGA 2 cut(s) 352, 1664
AvaII GGWCC 2 cut(s) 1004, 1355
BanII GRGCYC 1 cut(s) 1235
BbrPI CACGTG 1 cut(s) 1246
BbsI GAAGAC 1 cut(s) 86
BbvCI CCTCAGC 1 cut(s) 1617
BccI CCATC 6 cut(s) 243, 315, 1179, 1228, 1447, 1475
BceAI ACGGC 2 cut(s) 1225, 1437
BciVI GTATCC 1 cut(s) 1331
BclI TGATCA 1 cut(s) 1654
BcuI ACTAGT 1 cut(s) 398
BfaI CTAG 8 cut(s) 38, 225, 399, 549, 672, 707, 1050, 1175
BfoI RGCGCY 2 cut(s) 1736, 1744
BfuI GTATCC 1 cut(s) 1331
BglII AGATCT 1 cut(s) 1644
BmcAI AGTACT 1 cut(s) 121
Bme18I GGWCC 2 cut(s) 1004, 1355
BmgT120I GGNCC 2 cut(s) 1004, 1355
BmiI GGNNCC 2 cut(s) 735, 1357
BmrI ACTGGG 1 cut(s) 270
BmsI GCATC 3 cut(s) 832, 1395, 1687
BmuI ACTGGG 1 cut(s) 270
BpiI GAAGAC 1 cut(s) 86
Bpu10I CCTNAGC 1 cut(s) 1617
BpuEI CTTGAG 2 cut(s) 623, 1696
Bsa29I ATCGAT 1 cut(s) 500
BsaAI YACGTR 1 cut(s) 1246
BsaWI WCCGGW 1 cut(s) 1136
BsaXI ACNNNNNCTCC 2 cut(s) 1118, 1148
Bse1I ACTGG 6 cut(s) 38, 117, 268, 276, 1314, 1573
BseAI TCCGGA 1 cut(s) 1136
BseCI ATCGAT 1 cut(s) 500
BseGI GGATG 5 cut(s) 695, 862, 1220, 1295, 1702
BseMII CTCAG 5 cut(s) 395, 824, 1520, 1589, 1631
BseNI ACTGG 6 cut(s) 38, 117, 268, 276, 1314, 1573
Bsh1236I CGCG 1 cut(s) 338
BshVI ATCGAT 1 cut(s) 500
BsiSI CCGG 1 cut(s) 1137
BslFI GGGAC 1 cut(s) 370
BsmFI GGGAC 1 cut(s) 370
BsmI GAATGC 2 cut(s) 349, 631
Bsp1286I GDGCHC 1 cut(s) 1235
Bsp13I TCCGGA 1 cut(s) 1136
Bsp143I GATC 6 cut(s) 497, 1042, 1591, 1644, 1654, 1671
BspACI CCGC 3 cut(s) 338, 347, 1778
BspCNI CTCAG 5 cut(s) 396, 823, 1519, 1588, 1630
BspDI ATCGAT 1 cut(s) 500
BspEI TCCGGA 1 cut(s) 1136
BspFNI CGCG 1 cut(s) 338
BspHI TCATGA 1 cut(s) 28
BspLI GGNNCC 2 cut(s) 735, 1357
BspPI GGATC 3 cut(s) 505, 1050, 1586
BsrI ACTGG 6 cut(s) 38, 117, 268, 276, 1314, 1573
BssMI GATC 6 cut(s) 497, 1042, 1591, 1644, 1654, 1671
Bst4CI ACNGT 5 cut(s) 257, 384, 594, 1228, 1517
BstBAI YACGTR 1 cut(s) 1246
BstC8I GCNNGC 1 cut(s) 1436
BstDEI CTNAG 7 cut(s) 17, 404, 810, 1506, 1520, 1575, 1617
BstF5I GGATG 5 cut(s) 695, 862, 1220, 1295, 1702
BstFNI CGCG 1 cut(s) 338
BstH2I RGCGCY 2 cut(s) 1736, 1744
BstHHI GCGC 2 cut(s) 1735, 1743
BstKTI GATC 6 cut(s) 500, 1045, 1594, 1647, 1657, 1674
BstMBI GATC 6 cut(s) 497, 1042, 1591, 1644, 1654, 1671
BstMWI GCNNNNNNNGC 1 cut(s) 626
BstNSI RCATGY 3 cut(s) 447, 1031, 1438
BstUI CGCG 1 cut(s) 338
BstV2I GAAGAC 1 cut(s) 86
BstX2I RGATCY 2 cut(s) 1042, 1644
BstXI CCANNNNNNTGG 2 cut(s) 1155, 1481
BstYI RGATCY 2 cut(s) 1042, 1644
Bsu15I ATCGAT 1 cut(s) 500
BsuI GTATCC 1 cut(s) 1331
BsuTUI ATCGAT 1 cut(s) 500
BtsCI GGATG 5 cut(s) 695, 862, 1220, 1295, 1702
BtsIMutI CAGTG 2 cut(s) 283, 1233
Cac8I GCNNGC 1 cut(s) 1436
CciI TCATGA 1 cut(s) 28
CfoI GCGC 2 cut(s) 1735, 1743
Cfr13I GGNCC 2 cut(s) 1004, 1355
ClaI ATCGAT 1 cut(s) 500
CseI GACGC 1 cut(s) 344
Csp6I GTAC 3 cut(s) 120, 472, 882
CviAII CATG 8 cut(s) 29, 158, 444, 1028, 1180, 1435, 1710, 1729
CviQI GTAC 3 cut(s) 120, 472, 882
DdeI CTNAG 7 cut(s) 17, 404, 810, 1506, 1520, 1575, 1617
DpnI GATC 6 cut(s) 499, 1044, 1593, 1646, 1656, 1673
DpnII GATC 6 cut(s) 497, 1042, 1591, 1644, 1654, 1671
DraI TTTAAA 2 cut(s) 745, 1320
DrdI GACNNNNNNGTC 1 cut(s) 1175
DseDI GACNNNNNNGTC 1 cut(s) 1175
Eco24I GRGCYC 1 cut(s) 1235
Eco47I GGWCC 2 cut(s) 1004, 1355
Eco57I CTGAAG 1 cut(s) 1370
Eco72I CACGTG 1 cut(s) 1246
EcoO109I RGGNCCY 1 cut(s) 1355
EcoRI GAATTC 1 cut(s) 1488
EcoT38I GRGCYC 1 cut(s) 1235
FaeI CATG 8 cut(s) 32, 161, 447, 1031, 1183, 1438, 1713, 1732
FaqI GGGAC 1 cut(s) 370
FatI CATG 8 cut(s) 28, 157, 443, 1027, 1179, 1434, 1709, 1728
FbaI TGATCA 1 cut(s) 1654
FblI GTMKAC 1 cut(s) 440
FokI GGATG 5 cut(s) 682, 869, 1207, 1282, 1709
FriOI GRGCYC 1 cut(s) 1235
FspBI CTAG 8 cut(s) 38, 225, 399, 549, 672, 707, 1050, 1175
GlaI GCGC 2 cut(s) 1734, 1742
HaeII RGCGCY 2 cut(s) 1736, 1744
HapII CCGG 1 cut(s) 1137
HgaI GACGC 1 cut(s) 344
HhaI GCGC 2 cut(s) 1735, 1743
Hin1II CATG 8 cut(s) 32, 161, 447, 1031, 1183, 1438, 1713, 1732
Hin6I GCGC 2 cut(s) 1733, 1741
HinP1I GCGC 2 cut(s) 1733, 1741
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HindIII AAGCTT 1 cut(s) 715
HinfI GANTC 4 cut(s) 343, 502, 664, 886
HpaII CCGG 1 cut(s) 1137
HphI GGTGA 2 cut(s) 352, 1664
Hpy166II GTNNAC 3 cut(s) 163, 410, 441
Hpy8I GTNNAC 3 cut(s) 163, 410, 441
HpyAV CCTTC 7 cut(s) 108, 201, 629, 872, 995, 1302, 1394
HpyCH4III ACNGT 5 cut(s) 257, 384, 594, 1228, 1517
HpyCH4IV ACGT 2 cut(s) 894, 1245
HpyCH4V TGCA 9 cut(s) 183, 369, 376, 774, 898, 989, 1311, 1626, 1700
HpyF10VI GCNNNNNNNGC 1 cut(s) 626
HpyF3I CTNAG 7 cut(s) 17, 404, 810, 1506, 1520, 1575, 1617
HpySE526I ACGT 2 cut(s) 894, 1245
Hsp92II CATG 8 cut(s) 32, 161, 447, 1031, 1183, 1438, 1713, 1732
HspAI GCGC 2 cut(s) 1733, 1741
Kpn2I TCCGGA 1 cut(s) 1136
Ksp22I TGATCA 1 cut(s) 1654
Kzo9I GATC 6 cut(s) 497, 1042, 1591, 1644, 1654, 1671
LmnI GCTCC 2 cut(s) 60, 1584
LweI GCATC 3 cut(s) 832, 1395, 1687
MaeI CTAG 8 cut(s) 38, 225, 399, 549, 672, 707, 1050, 1175
MaeII ACGT 2 cut(s) 894, 1245
MaeIII GTNAC 4 cut(s) 5, 479, 890, 1193
MalI GATC 6 cut(s) 499, 1044, 1593, 1646, 1656, 1673
MboI GATC 6 cut(s) 497, 1042, 1591, 1644, 1654, 1671
MboII GAAGA 4 cut(s) 86, 132, 1697, 1700
MfeI CAATTG 1 cut(s) 557
MflI RGATCY 2 cut(s) 1042, 1644
MhlI GDGCHC 1 cut(s) 1235
MlyI GAGTC 1 cut(s) 880
MmeI TCCRAC 5 cut(s) 723, 1315, 1517, 1589, 1737
MroI TCCGGA 1 cut(s) 1136
MroXI GAANNNNTTC 1 cut(s) 936
MslI CAYNNNNRTG 2 cut(s) 984, 1727
MspA1I CMGCKG 1 cut(s) 1621
MspI CCGG 1 cut(s) 1137
MunI CAATTG 1 cut(s) 557
Mva1269I GAATGC 2 cut(s) 349, 631
MvnI CGCG 1 cut(s) 338
MwoI GCNNNNNNNGC 1 cut(s) 626
NdeII GATC 6 cut(s) 497, 1042, 1591, 1644, 1654, 1671
NlaIII CATG 8 cut(s) 32, 161, 447, 1031, 1183, 1438, 1713, 1732
NlaIV GGNNCC 2 cut(s) 735, 1357
NmuCI GTSAC 1 cut(s) 479
NspI RCATGY 3 cut(s) 447, 1031, 1438
PaeI GCATGC 1 cut(s) 1438
PagI TCATGA 1 cut(s) 28
PciI ACATGT 1 cut(s) 443
PctI GAATGC 2 cut(s) 349, 631
PdmI GAANNNNTTC 1 cut(s) 936
PfeI GAWTC 3 cut(s) 343, 502, 664
PleI GAGTC 1 cut(s) 880
PmaCI CACGTG 1 cut(s) 1246
PmlI CACGTG 1 cut(s) 1246
PpsI GAGTC 1 cut(s) 880
Ppu21I YACGTR 1 cut(s) 1246
PpuMI RGGWCCY 1 cut(s) 1355
PscI ACATGT 1 cut(s) 443
Psp5II RGGWCCY 1 cut(s) 1355
PspCI CACGTG 1 cut(s) 1246
PspN4I GGNNCC 2 cut(s) 735, 1357
PspPI GGNCC 2 cut(s) 1004, 1355
PspPPI RGGWCCY 1 cut(s) 1355
PsuI RGATCY 2 cut(s) 1042, 1644
PvuII CAGCTG 1 cut(s) 1621
RsaI GTAC 3 cut(s) 121, 473, 883
RsaNI GTAC 3 cut(s) 120, 472, 882
RseI CAYNNNNRTG 2 cut(s) 984, 1727
Sau3AI GATC 6 cut(s) 497, 1042, 1591, 1644, 1654, 1671
Sau96I GGNCC 2 cut(s) 1004, 1355
ScaI AGTACT 1 cut(s) 121
SchI GAGTC 1 cut(s) 880
SduI GDGCHC 1 cut(s) 1235
SfaNI GCATC 3 cut(s) 832, 1395, 1687
SinI GGWCC 2 cut(s) 1004, 1355
SmiI ATTTAAAT 1 cut(s) 745
SmiMI CAYNNNNRTG 2 cut(s) 984, 1727
SmlI CTYRAG 2 cut(s) 602, 1675
SmoI CTYRAG 2 cut(s) 602, 1675
SpeI ACTAGT 1 cut(s) 398
SphI GCATGC 1 cut(s) 1438
SsiI CCGC 3 cut(s) 338, 347, 1778
SspI AATATT 1 cut(s) 835
SspMI CTAG 8 cut(s) 38, 225, 399, 549, 672, 707, 1050, 1175
SwaI ATTTAAAT 1 cut(s) 745
TaaI ACNGT 5 cut(s) 257, 384, 594, 1228, 1517
TaiI ACGT 2 cut(s) 897, 1248
TaqI TCGA 3 cut(s) 500, 662, 999
TatI WGTACW 1 cut(s) 119
TfiI GAWTC 3 cut(s) 343, 502, 664
TscAI CASTG 2 cut(s) 283, 1233
TseFI GTSAC 1 cut(s) 479
Tsp45I GTSAC 1 cut(s) 479
TspDTI ATGAA 6 cut(s) 17, 513, 626, 638, 813, 1284
TspRI CASTG 2 cut(s) 283, 1233
VpaK11BI GGWCC 2 cut(s) 1004, 1355
XapI RAATTY 7 cut(s) 136, 329, 943, 955, 1215, 1488, 1560
XbaI TCTAGA 2 cut(s) 548, 671
XceI RCATGY 3 cut(s) 447, 1031, 1438
XcmI CCANNNNNNNNNTGG 1 cut(s) 873
XmiI GTMKAC 1 cut(s) 440
XmnI GAANNNNTTC 1 cut(s) 936
XspI CTAG 8 cut(s) 38, 225, 399, 549, 672, 707, 1050, 1175
ZrmI AGTACT 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.