Rroxscaffold_2G00111660

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
36351712 .. 36357657
5946 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00111660.1

Sequence Viewer

Length: 3402 bp
ATGCAAGGGGAGGCGAAGATGGTGAAGATTTTGCTGCGTATCTTCATCTGGCAAACCGGTAGGACTCAAAAAGGTGGGAAATTTCGACAGAAAGCGAATGAAATAATTACCGTTGTCCAACGGATAGTGACCTTTGCATTGTTTCAAAATTCAACACTAGCATTCAGGTACCAAAAGAACCAGTACAATGTGTTTATGGTCAACCAATCTGGGTATGACAACTGCACACTGGATAGTGCAATGGGGAACTGGAGCAGTGGCAAGGACTTCATACTCTTCAATAAATCCGAGAGATACTACTTCATTTGTGGAAATGGCCAGTGCTTCAATGGGATGAAAGTCACTGTTCTCGTCCATCCTCTGCTCACGCCAACGGCTTCTCCATCCCCCAAGAATTCTACATCAGACTCTGCTGGCCCAGTGGCTCCACGACTGGGATTTCGTGTTTTGCTGACGTCCTTGGCAGTGATGTGGTTTGGAGACCATTCGCTAAATACAGATCCTTTGCTCATTCCCAATTCTGATACACATTGCAGATCATCTCCTGAGCCGATCATAATCATGTTATCCACAACCCTAAGTAACAGGCCCATGAGCTCTGTCTTGGTTGGATTACTATGCCTGGTCACTACCTCTGCTATTTGTTGTCTATGTAGTGGGATCAGTCCCAACACTAGGTGCATAGCGAGTGAAAAAACTGCACTTCTTCAGTTCAAGCAGGGACTCCTAGACGAGTCAAATGTTCTTGCCTCTTGGCAAAACCAGAAAGACTGTTGCGAGTGGAGAGGAATAGCATGCAACAACCAAACAGGACATGTCATCATGCTCGATCTGTACTATAATTCTTCTGATGTTTACAATGTTGAAACTCCCTTAAGAGGTGTGATTGCTCCTTCACTACTTGAATTGCAATATCTAAGTTACTTGGACCTCAGTAACAATTACTTTGAAGGAATGATTCCCAAATTTATTGGTTATTTGAGTCAGTTGAAAGTACTCAAACTTGCAGGTGCTAGTTTCACTGGACTTATTCCTCCCCAACTTGGGAATCTCTCTAAGTTGCATACTCTTGATCTCGCAAGGAATGTTGTAACTTTTGAAAATCTCGAGTGGTTAACTCATCTTTATTCCTTGAGATACCTGAACATGTCAGGTCTAAATTTTTCTGAGTCTGTAAATTGGCCAGAGTCTATAAGCAAGCTGCCATCACTGGTAGAGCTTCAGTTATCTTCATGTAATCTTCCTAATGTTGATTTGAGATCACTTTCCTTTATTAATTCTTCCACCACTCTTGAAGTCCTTGAGCTCTCTGATAATCTTCTCAACTCTTCAATTTTTTATTGGATAGCCAATGTCAGCACCAAGTTTGTCCATATTGGACTGATGGGAGATCAATTACAAGGTCCAATCCCAGATGTTTTCGCAAAAATGGTTTTTCTAGTATCTCTTGATCTCTCTTATAACCATCTGGAAGGTGGGATCCCAAAATCCTTTCAAAACATTTGCAGCTTAGAATCATTGAATTTATGGGAAAATAAATTGTCTGACAGACTTGAAAACTCTGTCAAAAACTTGGCTTGTTCTGAAAGTACCCTTAAGTCATTGTTCTTAAGTGGGAATCCATTTTGGGGGTCCTTTCCTGCTGAACTTACACAATTTGTATCCTTGACAGAATTATACATTGATGGTACCAATATGAGTGGATTGCTCCCGAAAGGTTTTCAGCAACTTTCCCAGCTAAGATCCTTGAGCTTAGTTTTTAACCAGTTCAGCGGTTCATTGCCAGATTTTGCTGGTCTTCCATCACTCAGGTTGTTATTTCTTTCCAACAATCAATTCAACGGATCTATACCTGAGAGCATGGGGCTTCTTTCCAGCCTCGAATATTTGGCTGTTTCTTGGAATTCTTTGACTGGTGCCCTCACTGAAGCTCACTTTTCAAACCTGTCTCGTTTAAGGTCTTTGTCTATAGATCACAATCCTTTGTCTTTCAACTTGAGCTTCAATTGGAATCCACCTTTTCAACTAGAAACTTTAGATGTGTCTTCTTGCAAGATAGGTCCAGCTTTTCCCAGGTGGATTCAAAAGCAGAGAGAACTCACTTCTCTTTTTATGTCCAATGCAAGTATTTCAGATTCAGTACCTAATGAGTTTTGGGATCTATCTTCCAGCTTATTTGAATTAAATCTCTCCATGAACCAAATCCATGGGAAGTTACCTGATCTGTCAACAAAAAATTGCTCCTACTTTACATTTGACTTGTCATCTAATCACTTGTTTGAAGCTCAGAAGTTGTCGAATCTTGACCTTTCTGACAACTTACTATCAGGGGAACTTCCTAGTTGTTGGATCAAGTATCAGGAATTGCTGTCCTTGAATTTGGGAAACAATACTTTCTCTGGAAATATTCCAAGCACAGTAGGCTACTTAAAGAATCTTGTATTGTTACGCTTACAGGATAACAAGCTCTCAGGAGATTTGCCTTCTCTAGAGAACTGTACTGAGCTGAGGGTTGTTGACCTTGGAACCAATAGATTATCTGGAAGAATACCGGCATGGATAGGCCAAACCCTGACCAAGTTGTTGGTTCTGCGCTTACATTCTAATGAGTTCTATGGAAGCTTACCCTTAAGTCTCTGTGGTCTATCTGTTATTCATGTTCTGGACCTGTCTCAGAACAACATATCTGGAGCATTGCCACATTGCCTCAATAACATAACAGCTTACACTTCTATGTCTTCTCAGTTGGAGGATCTCACAATTCTTGGGTTTGTGCAACTGGTCTGGAAAGGAATAAATATTCAGTGGGGCGAAAATCTCAAGCACTTGAGAAGCATTGACATTTCGAGTAATTACTTAAGTGGGGATATTCCGGAAACTATGACAAGTATGATGAGGTTGATTTCTCTGAACCTGTCAAGAAATAATTTGACTGGAGTGCTTCCCAGTGATTTTGGACAGCTCAAGAGCTTAGAATCTCTTGATTTATCACGAAACCAGCTATCTGGTAACATTCCTGCAAGCCTTTCGCGCTTAAACTTTCTTAGTGTCTTGAACCTTTCATACAACAACTTGTCAGGAAGAATTCCACTAGGTACTCAACTTCAGAGTTTTAATGCCTCTGCATACATGGACAACCTTGGACTTTGCGGACCACCGCTAACTCCACTGTGTCCTGGAGATGCAACAAATCAAGATTCTCCACCCACTAGTGGAGCTGAAGGGGATAAAACAGAACAAGACGAAGATGGTCTAACAACGTTGGGGTTCTATGTTAGCTCAGTGCTTGGATTCATCATAGGATTCTGGGGATTCTGTGGCCCTTTGTTGATTAAGGTTTCTTGGAGAATTGCCTACTTCCAGTACTTGAATGATATTAAAATTTGGAACTGCCATGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1133

Amino Acids

125.68

Weight (kDa)

5.73

Isoelectric Point (pI)

37.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu_bind_like PF02298 52 - 112 1.8e-09 Plastocyanin-like domain
LRRNT_2 PF08263 229 - 267 3.7e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 298 - 409 1.6e-07 Leucine-rich repeat region
LRR_14 PF23598 528 - 702 2.4e-11 Leucine-rich repeat region
LRR_8 PF13855 555 - 613 1.6e-07 Leucine rich repeat
LRR_14 PF23598 938 - 1024 8e-06 Leucine-rich repeat region
LRR_8 PF13855 942 - 1001 5.3e-12 Leucine rich repeat
LRR_8 PF13855 967 - 1025 2.7e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1461
AarI CACCTGC 1 cut(s) 998
AatII GACGTC 1 cut(s) 458
Acc36I ACCTGC 1 cut(s) 998
Acc65I GGTACC 2 cut(s) 168, 1688
AccB1I GGYRCC 3 cut(s) 168, 1688, 1916
AccII CGCG 1 cut(s) 3031
AccIII TCCGGA 1 cut(s) 2872
AciI CCGC 3 cut(s) 1773, 3150, 3158
AclI AACGTT 1 cut(s) 3260
AclWI GGATC 9 cut(s) 494, 668, 1474, 1487, 1737, 1852, 2166, 2357, 2760
AcoI YGGCCR 2 cut(s) 316, 1181
AcuI CTGAAG 5 cut(s) 692, 1205, 1947, 3089, 3240
AcyI GRCGYC 1 cut(s) 455
AdeI CACNNNGTG 1 cut(s) 678
AfiI CCNNNNNNNGG 7 cut(s) 434, 675, 878, 1043, 1044, 1628, 3212
AflII CTTAAG 5 cut(s) 874, 1595, 1609, 2629, 2857
AflIII ACRYGT 2 cut(s) 814, 1146
AgeI ACCGGT 1 cut(s) 56
AhlI ACTAGT 1 cut(s) 3209
AjnI CCWGG 3 cut(s) 621, 2072, 3175
AjuI GAANNNNNNNTTGG 2 cut(s) 1820, 1852
Alw21I GWGCWC 2 cut(s) 599, 1308
Alw26I GTCTC 4 cut(s) 474, 1953, 2639, 2676
AlwI GGATC 9 cut(s) 494, 668, 1474, 1487, 1737, 1852, 2166, 2357, 2760
AlwNI CAGNNNCTG 1 cut(s) 410
Ama87I CYCGRG 1 cut(s) 1106
Aor13HI TCCGGA 1 cut(s) 2872
AoxI GGCC 6 cut(s) 316, 415, 587, 1181, 2563, 3319
ApeKI GCWGC 3 cut(s) 34, 1201, 1506
ArsI GACNNNNNNTTYG 2 cut(s) 423, 455
AseI ATTAAT 1 cut(s) 1275
AsiGI ACCGGT 1 cut(s) 56
Asp718I GGTACC 2 cut(s) 168, 1688
AspLEI GCGC 2 cut(s) 2595, 3033
AspS9I GGNCC 9 cut(s) 416, 588, 928, 1403, 1632, 2060, 2665, 3152, 3320
AsuHPI GGTGA 1 cut(s) 34
AvaI CYCGRG 1 cut(s) 1106
AvaII GGWCC 6 cut(s) 928, 1403, 1632, 2060, 2665, 3152
BaeGI GKGCMC 1 cut(s) 1921
BalI TGGCCA 2 cut(s) 318, 1183
BamHI GGATCC 1 cut(s) 1479
BanI GGYRCC 3 cut(s) 168, 1688, 1916
BanII GRGCYC 2 cut(s) 599, 1308
BbsI GAAGAC 3 cut(s) 1790, 2037, 2730
Bbv12I GWGCWC 2 cut(s) 599, 1308
BbvCI CCTCAGC 1 cut(s) 2507
BbvI GCAGC 3 cut(s) 21, 1188, 1518
BccI CCATC 9 cut(s) 13, 363, 391, 1213, 1378, 1473, 1679, 1810, 3242
BceAI ACGGC 1 cut(s) 390
BcgI CGANNNNNNTGC 2 cut(s) 3009, 3043
BciT130I CCWGG 3 cut(s) 623, 2074, 3177
BciVI GTATCC 1 cut(s) 1672
BcoDI GTCTC 4 cut(s) 474, 1953, 2639, 2676
BcuI ACTAGT 1 cut(s) 3209
BfmI CTRYAG 1 cut(s) 1968
BfrI CTTAAG 5 cut(s) 874, 1595, 1609, 2629, 2857
BfuAI ACCTGC 1 cut(s) 998
BfuI GTATCC 1 cut(s) 1672
BisI GCNGC 3 cut(s) 35, 1202, 1507
BlsI GCNGC 3 cut(s) 36, 1203, 1508
BmcAI AGTACT 2 cut(s) 996, 3365
Bme1390I CCNGG 3 cut(s) 623, 2074, 3177
Bme18I GGWCC 6 cut(s) 928, 1403, 1632, 2060, 2665, 3152
BmeT110I CYCGRG 1 cut(s) 1106
BmgT120I GGNCC 9 cut(s) 416, 588, 928, 1403, 1632, 2060, 2665, 3152, 3320
BmiI GGNNCC 7 cut(s) 170, 426, 1481, 1633, 1690, 1918, 2527
BmrFI CCNGG 3 cut(s) 623, 2074, 3177
BmrI ACTGGG 3 cut(s) 413, 443, 2940
BmsI GCATC 1 cut(s) 3172
BmuI ACTGGG 3 cut(s) 413, 443, 2940
BpiI GAAGAC 3 cut(s) 1790, 2037, 2730
BpmI CTGGAG 4 cut(s) 271, 2709, 2955, 3198
Bpu10I CCTNAGC 2 cut(s) 546, 2507
BpuEI CTTGAG 7 cut(s) 1153, 1322, 1768, 2017, 2804, 2848, 2948
BsaBI GATNNNNATC 2 cut(s) 557, 1977
BsaHI GRCGYC 1 cut(s) 455
BsaI GGTCTC 1 cut(s) 474
BsaJI CCNNGG 5 cut(s) 459, 2072, 2206, 2521, 3139
BsaWI WCCGGW 2 cut(s) 56, 2872
BsaXI ACNNNNNCTCC 2 cut(s) 364, 394
Bsc4I CCNNNNNNNGG 7 cut(s) 434, 675, 878, 1043, 1044, 1628, 3212
Bse118I RCCGGY 2 cut(s) 56, 2551
Bse3DI GCAATG 5 cut(s) 246, 529, 1778, 2693, 2701
Bse8I GATNNNNATC 2 cut(s) 557, 1977
BseAI TCCGGA 1 cut(s) 2872
BseBI CCWGG 3 cut(s) 623, 2074, 3177
BseDI CCNNGG 5 cut(s) 459, 2072, 2206, 2521, 3139
BseGI GGATG 3 cut(s) 339, 355, 383
BseJI GATNNNNATC 2 cut(s) 557, 1977
BseLI CCNNNNNNNGG 7 cut(s) 434, 675, 878, 1043, 1044, 1628, 3212
BseMI GCAATG 5 cut(s) 246, 529, 1778, 2693, 2701
BseSI GKGCMC 1 cut(s) 1921
BseXI GCAGC 3 cut(s) 21, 1188, 1518
BseYI CCCAGC 1 cut(s) 1734
BsgI GTGCAG 2 cut(s) 208, 684
Bsh1236I CGCG 1 cut(s) 3031
BshFI GGCC 6 cut(s) 318, 417, 589, 1183, 2565, 3321
BshNI GGYRCC 3 cut(s) 168, 1688, 1916
BshTI ACCGGT 1 cut(s) 56
BsiHKAI GWGCWC 2 cut(s) 599, 1308
BsiHKCI CYCGRG 1 cut(s) 1106
BsiSI CCGG 3 cut(s) 57, 2552, 2873
BslFI GGGAC 2 cut(s) 651, 735
BslI CCNNNNNNNGG 7 cut(s) 434, 675, 878, 1043, 1044, 1628, 3212
BsmAI GTCTC 4 cut(s) 474, 1953, 2639, 2676
BsmFI GGGAC 2 cut(s) 651, 735
BsmI GAATGC 1 cut(s) 161
BsnI GGCC 6 cut(s) 318, 417, 589, 1183, 2565, 3321
Bso31I GGTCTC 1 cut(s) 474
BsoBI CYCGRG 1 cut(s) 1106
Bsp1286I GDGCHC 3 cut(s) 599, 1308, 1921
Bsp13I TCCGGA 1 cut(s) 2872
Bsp19I CCATGG 1 cut(s) 2206
BspACI CCGC 3 cut(s) 1773, 3150, 3158
BspANI GGCC 6 cut(s) 318, 417, 589, 1183, 2565, 3321
BspEI TCCGGA 1 cut(s) 2872
BspFNI CGCG 1 cut(s) 3031
BspLI GGNNCC 7 cut(s) 170, 426, 1481, 1633, 1690, 1918, 2527
BspMI ACCTGC 1 cut(s) 998
BspPI GGATC 9 cut(s) 494, 668, 1474, 1487, 1737, 1852, 2166, 2357, 2760
BspT107I GGYRCC 3 cut(s) 168, 1688, 1916
BspTI CTTAAG 5 cut(s) 874, 1595, 1609, 2629, 2857
BspTNI GGTCTC 1 cut(s) 474
BsrDI GCAATG 5 cut(s) 246, 529, 1778, 2693, 2701
BsrFI RCCGGY 2 cut(s) 56, 2551
BssAI RCCGGY 2 cut(s) 56, 2551
BssECI CCNNGG 5 cut(s) 459, 2072, 2206, 2521, 3139
BssNI GRCGYC 1 cut(s) 455
BssT1I CCWWGG 4 cut(s) 459, 2206, 2521, 3139
Bst2UI CCWGG 3 cut(s) 623, 2074, 3177
Bst4CI ACNGT 6 cut(s) 112, 346, 773, 2419, 2498, 3171
Bst6I CTCTTC 2 cut(s) 281, 1333
BstACI GRCGYC 1 cut(s) 455
BstAFI CTTAAG 5 cut(s) 874, 1595, 1609, 2629, 2857
BstC8I GCNNGC 4 cut(s) 415, 796, 1199, 3022
BstDSI CCRYGG 1 cut(s) 2206
BstF5I GGATG 3 cut(s) 339, 355, 383
BstFNI CGCG 1 cut(s) 3031
BstHHI GCGC 2 cut(s) 2595, 3033
BstMAI GTCTC 4 cut(s) 474, 1953, 2639, 2676
BstMWI GCNNNNNNNGC 2 cut(s) 2421, 3030
BstNI CCWGG 3 cut(s) 623, 2074, 3177
BstNSI RCATGY 3 cut(s) 798, 818, 1150
BstSCI CCNGG 3 cut(s) 621, 2072, 3175
BstSFI CTRYAG 1 cut(s) 1968
BstSLI GKGCMC 1 cut(s) 1921
BstUI CGCG 1 cut(s) 3031
BstV1I GCAGC 3 cut(s) 21, 1188, 1518
BstV2I GAAGAC 3 cut(s) 1790, 2037, 2730
BstX2I RGATCY 6 cut(s) 499, 1479, 1742, 1844, 2158, 2752
BstXI CCANNNNNNTGG 3 cut(s) 2207, 2584, 3005
BstYI RGATCY 6 cut(s) 499, 1479, 1742, 1844, 2158, 2752
BsuI GTATCC 1 cut(s) 1672
BsuRI GGCC 6 cut(s) 318, 417, 589, 1183, 2565, 3321
BtgI CCRYGG 1 cut(s) 2206
BtsCI GGATG 3 cut(s) 339, 355, 383
BtsI GCAGTG 2 cut(s) 262, 471
BveI ACCTGC 1 cut(s) 998
Cac8I GCNNGC 4 cut(s) 415, 796, 1199, 3022
CaiI CAGNNNCTG 1 cut(s) 410
CfoI GCGC 2 cut(s) 2595, 3033
Cfr10I RCCGGY 2 cut(s) 56, 2551
Cfr13I GGNCC 9 cut(s) 416, 588, 928, 1403, 1632, 2060, 2665, 3152, 3320
CspAI ACCGGT 1 cut(s) 56
CspCI CAANNNNNGTGG 4 cut(s) 1273, 1308, 1681, 1716
DraIII CACNNNGTG 1 cut(s) 678
EaeI YGGCCR 2 cut(s) 316, 1181
Eam1104I CTCTTC 2 cut(s) 281, 1333
EarI CTCTTC 2 cut(s) 281, 1333
Ecl136II GAGCTC 2 cut(s) 597, 1306
Eco130I CCWWGG 4 cut(s) 459, 2206, 2521, 3139
Eco24I GRGCYC 2 cut(s) 599, 1308
Eco31I GGTCTC 1 cut(s) 474
Eco47I GGWCC 6 cut(s) 928, 1403, 1632, 2060, 2665, 3152
Eco53kI GAGCTC 2 cut(s) 597, 1306
Eco57I CTGAAG 5 cut(s) 692, 1205, 1947, 3089, 3240
Eco88I CYCGRG 1 cut(s) 1106
EcoICRI GAGCTC 2 cut(s) 597, 1306
EcoO109I RGGNCCY 1 cut(s) 1632
EcoRI GAATTC 3 cut(s) 394, 1903, 3084
EcoRII CCWGG 3 cut(s) 621, 2072, 3175
EcoT14I CCWWGG 4 cut(s) 459, 2206, 2521, 3139
EcoT38I GRGCYC 2 cut(s) 599, 1308
ErhI CCWWGG 4 cut(s) 459, 2206, 2521, 3139
FaqI GGGAC 2 cut(s) 651, 735
Fnu4HI GCNGC 3 cut(s) 35, 1202, 1507
FokI GGATG 3 cut(s) 342, 346, 370
FriOI GRGCYC 2 cut(s) 599, 1308
Fsp4HI GCNGC 3 cut(s) 35, 1202, 1507
GlaI GCGC 2 cut(s) 2594, 3032
GluI GCNGC 3 cut(s) 35, 1202, 1507
GsaI CCCAGC 1 cut(s) 1738
GsuI CTGGAG 4 cut(s) 271, 2709, 2955, 3198
HaeIII GGCC 6 cut(s) 318, 417, 589, 1183, 2565, 3321
HapII CCGG 3 cut(s) 57, 2552, 2873
HhaI GCGC 2 cut(s) 2595, 3033
Hin1I GRCGYC 1 cut(s) 455
Hin6I GCGC 2 cut(s) 2593, 3031
HinP1I GCGC 2 cut(s) 2593, 3031
HincII GTYRAC 4 cut(s) 202, 1116, 2229, 2518
HindII GTYRAC 4 cut(s) 202, 1116, 2229, 2518
HindIII AAGCTT 1 cut(s) 2620
HpaI GTTAAC 1 cut(s) 1116
HpaII CCGG 3 cut(s) 57, 2552, 2873
HphI GGTGA 1 cut(s) 34
Hpy166II GTNNAC 5 cut(s) 202, 856, 1116, 2229, 2518
Hpy8I GTNNAC 5 cut(s) 202, 856, 1116, 2229, 2518
HpyAV CCTTC 5 cut(s) 903, 944, 1466, 2493, 3215
HpyCH4III ACNGT 6 cut(s) 112, 346, 773, 2419, 2498, 3171
HpyCH4IV ACGT 2 cut(s) 455, 3260
HpyF10VI GCNNNNNNNGC 2 cut(s) 2421, 3030
HpySE526I ACGT 2 cut(s) 455, 3260
Hsp92I GRCGYC 1 cut(s) 455
HspAI GCGC 2 cut(s) 2593, 3031
Kpn2I TCCGGA 1 cut(s) 2872
KpnI GGTACC 2 cut(s) 172, 1692
KspAI GTTAAC 1 cut(s) 1116
LmnI GCTCC 7 cut(s) 252, 430, 895, 1713, 2246, 2690, 3215
Lsp1109I GCAGC 3 cut(s) 21, 1188, 1518
LweI GCATC 1 cut(s) 3172
MaeII ACGT 2 cut(s) 455, 3260
MfeI CAATTG 1 cut(s) 2005
MflI RGATCY 6 cut(s) 499, 1479, 1742, 1844, 2158, 2752
MhlI GDGCHC 3 cut(s) 599, 1308, 1921
MlsI TGGCCA 2 cut(s) 318, 1183
MluNI TGGCCA 2 cut(s) 318, 1183
MlyI GAGTC 7 cut(s) 58, 401, 717, 743, 991, 1178, 1196
MmeI TCCRAC 5 cut(s) 142, 589, 1851, 2327, 2727
Mox20I TGGCCA 2 cut(s) 318, 1183
MroI TCCGGA 1 cut(s) 2872
MscI TGGCCA 2 cut(s) 318, 1183
MslI CAYNNNNRTG 3 cut(s) 560, 2604, 2732
Msp20I TGGCCA 2 cut(s) 318, 1183
MspA1I CMGCKG 1 cut(s) 1773
MspCI CTTAAG 5 cut(s) 874, 1595, 1609, 2629, 2857
MspI CCGG 3 cut(s) 57, 2552, 2873
MspR9I CCNGG 3 cut(s) 623, 2074, 3177
MunI CAATTG 1 cut(s) 2005
Mva1269I GAATGC 1 cut(s) 161
MvaI CCWGG 3 cut(s) 623, 2074, 3177
MvnI CGCG 1 cut(s) 3031
MwoI GCNNNNNNNGC 2 cut(s) 2421, 3030
NcoI CCATGG 1 cut(s) 2206
NlaIV GGNNCC 7 cut(s) 170, 426, 1481, 1633, 1690, 1918, 2527
NmuCI GTSAC 3 cut(s) 127, 340, 625
NspI RCATGY 3 cut(s) 798, 818, 1150
PaeI GCATGC 1 cut(s) 798
PaeR7I CTCGAG 1 cut(s) 1106
PaqCI CACCTGC 1 cut(s) 998
PciI ACATGT 2 cut(s) 814, 1146
PctI GAATGC 1 cut(s) 161
PfoI TCCNGGA 1 cut(s) 3175
PinAI ACCGGT 1 cut(s) 56
PkrI GCNGC 3 cut(s) 36, 1203, 1508
PleI GAGTC 7 cut(s) 58, 401, 717, 742, 990, 1177, 1195
PpsI GAGTC 7 cut(s) 58, 401, 717, 742, 990, 1177, 1195
PpuMI RGGWCCY 1 cut(s) 1632
PscI ACATGT 2 cut(s) 814, 1146
PshBI ATTAAT 1 cut(s) 1275
PsiI TTATAA 1 cut(s) 1461
Psp124BI GAGCTC 2 cut(s) 599, 1308
Psp1406I AACGTT 1 cut(s) 3260
Psp5II RGGWCCY 1 cut(s) 1632
Psp6I CCWGG 3 cut(s) 621, 2072, 3175
PspFI CCCAGC 1 cut(s) 1734
PspGI CCWGG 3 cut(s) 621, 2072, 3175
PspN4I GGNNCC 7 cut(s) 170, 426, 1481, 1633, 1690, 1918, 2527
PspPI GGNCC 9 cut(s) 416, 588, 928, 1403, 1632, 2060, 2665, 3152, 3320
PspPPI RGGWCCY 1 cut(s) 1632
PsrI GAACNNNNNNTAC 2 cut(s) 3047, 3079
PstNI CAGNNNCTG 1 cut(s) 410
PsuI RGATCY 6 cut(s) 499, 1479, 1742, 1844, 2158, 2752
RseI CAYNNNNRTG 3 cut(s) 560, 2604, 2732
SacI GAGCTC 2 cut(s) 599, 1308
SatI GCNGC 3 cut(s) 35, 1202, 1507
Sau96I GGNCC 9 cut(s) 416, 588, 928, 1403, 1632, 2060, 2665, 3152, 3320
ScaI AGTACT 2 cut(s) 996, 3365
SchI GAGTC 7 cut(s) 58, 401, 717, 743, 991, 1178, 1196
ScrFI CCNGG 3 cut(s) 623, 2074, 3177
SduI GDGCHC 3 cut(s) 599, 1308, 1921
SfaNI GCATC 1 cut(s) 3172
SfcI CTRYAG 1 cut(s) 1968
Sfr274I CTCGAG 1 cut(s) 1106
SinI GGWCC 6 cut(s) 928, 1403, 1632, 2060, 2665, 3152
SlaI CTCGAG 1 cut(s) 1106
SmiMI CAYNNNNRTG 3 cut(s) 560, 2604, 2732
SpeI ACTAGT 1 cut(s) 3209
SphI GCATGC 1 cut(s) 798
SsiI CCGC 3 cut(s) 1773, 3150, 3158
SspI AATATT 3 cut(s) 1886, 2407, 2800
SstI GAGCTC 2 cut(s) 599, 1308
StyD4I CCNGG 3 cut(s) 621, 2072, 3175
StyI CCWWGG 4 cut(s) 459, 2206, 2521, 3139
TaaI ACNGT 6 cut(s) 112, 346, 773, 2419, 2498, 3171
TaiI ACGT 2 cut(s) 458, 3263
TaqI TCGA 6 cut(s) 85, 828, 1107, 1881, 2297, 2846
TatI WGTACW 5 cut(s) 183, 834, 994, 2498, 3363
TseFI GTSAC 3 cut(s) 127, 340, 625
TseI GCWGC 3 cut(s) 34, 1201, 1506
Tsp45I GTSAC 3 cut(s) 127, 340, 625
TspGWI ACGGA 2 cut(s) 136, 1857
Vha464I CTTAAG 5 cut(s) 874, 1595, 1609, 2629, 2857
VpaK11BI GGWCC 6 cut(s) 928, 1403, 1632, 2060, 2665, 3152
VspI ATTAAT 1 cut(s) 1275
XbaI TCTAGA 1 cut(s) 2488
XceI RCATGY 3 cut(s) 798, 818, 1150
XcmI CCANNNNNNNNNTGG 2 cut(s) 326, 1472
XhoI CTCGAG 1 cut(s) 1106
ZraI GACGTC 1 cut(s) 456
ZrmI AGTACT 2 cut(s) 996, 3365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.