Rroxscaffold_4G00307100

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
28181604 .. 28187997
6394 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00307100.1

Sequence Viewer

Length: 1722 bp
ATGTCATCGAAGAAAATTCAAATTTTGGATTTCTCGATCAACAACTTCTTAGGGTTTATACCCAAATGTCTCCACAACTTTACAAGTTTGGCTCTAAATGGATTTTCAGCTACTATTGCACCTAGGATTAGGCAAGAATACTCAATTTATAACGAACCAACTACGTATCTTGGCGAGTACGTTGATGAAGCATCCCTGATATGGAAAGGAACAATGTCGAAATACAATAGAGTACTAAAGAGTATTGACCTCTCTTGCAATAGTTTCAGTGGGGAGATTGTTAGAATTTACACAAATGAGTACTATAAACTATCTCGGAATAAGCACATTGAATCCCCCAAGGCCCAGCCCACAAAGAAAATCTCTGATCCTCCACCCCTGCTTTCTCATTCGCCTCCTCCCCTTCCCTCTTCGGATCCTCCCCTTTCGGCTCCGGTTCCTCAAACCTCTCCACCTCCTCCTCCCCTTTCAGCTTCTTATCCAACACCCCCTCCTCCCCCGCTGATTACTGATCCTGCAATTTCAGTCGTGTATTCTCCCTTACATTTTGTGTGCAATATAGTTGGTGCTTATGCTGTCATGGCCAATGGTGGTGTTATAGCACCTGTTGGGTTGAATATGGTTGCACTTGCAGCCCAAAGGCATGCTGTCCCTTTGTTGTACTTGCTGGCAGTTACAAGAATGCTAGAATGGGGATCTGGTCTCCTGGGATTCTCAAACAGGGTTGGTCTTAGCCGGATTGAATTGAGATTGTGTCCTCTGTATTCACACGACCCTGAAGTCTTGTTGAATGAATTAAGATCTCCTTCTGAGCTGCTGGATTTTGGAGAATTCTCAGATTGCATGGATTTTCGAAGTGGCACTGATTCCCCACCTCTGCATGTTGTCAATCCTACATTTGATTTTGTGCCACCAAAGCTTGTCAAAAGTAAGTACCGGTGGGTATTTGGCTCAGTGCCTAAGCTCACAAAGTTTTCATCATTGAAAGAATTATACCTCTCTGGGAACCGTTTAACCGGAAGGCTACCTGAAAGTATTGGACAAATGTCCAATCTGGAGGCTATCTATCTTGGCAGGAACTCTTTCACTGGGGAGATTTCAGAAATCCATTTCTCAAAACTCTCCAAACCAAGTAGCTTGAGCCTGTCATCCAACTCATTTATATTCAATTTTGATCCTGGATGGGTTCCACCATTTCAATTGAATGAGATAAGTTTAATATCTTGCAAGATTGGACCGCATTTTCCAGAATGGATTCGAACTCAAAAGAGCTGTATTGAACTTGACATCTCTAATTCTGGGATTTCTGGGAATATGGATTTCTCTCACAACCAAATTGGAGGAACATTGTTTCCGAATTCAGTATTGGAAGTATTTACATATAATCCTCTCATCAATATGAGTTCAAATCAATTTGAAGGTCCAATCCCTTCGATTCTGTCAGAAGTATCTTCTTTGGATCTCTCCAATAATAAACTTTCAGGATCAAATTCTTTCTTGTGTGCAAGCAAAGGCAACTACAGTAAGTCAACCTTTCTTAAGCTCCCAAGCAACCATCTAGTTGGAGACCTTCTAGATTGCTGGACACTCTTTCTTGATTTAAGTAGCAATGCTTTTTCCGGAAACATTCCTACAACAATAGGCTCTTTGTTGTCTTTGAAGACATTGAAACTAAACAACAACAGATTTGTGTTCATCCTTGGGAAATTGCAAAAAGACTGA

Protein Analysis

573

Amino Acids

63.14

Weight (kDa)

8.24

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IF-2B PF01008 168 - 220 3.5e-07 Initiation factor 2 subunit family
LRR_8 PF13855 327 - 386 4.9e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 150
AasI GACNNNNNNGTC 1 cut(s) 779
AccIII TCCGGA 1 cut(s) 1619
AciI CCGC 2 cut(s) 500, 1238
AclWI GGATC 8 cut(s) 362, 410, 423, 506, 703, 1169, 1467, 1492
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 6 cut(s) 15, 21, 285, 830, 1357, 1489
AcuI CTGAAG 1 cut(s) 798
AfaI GTAC 5 cut(s) 179, 234, 302, 662, 935
AfiI CCNNNNNNNGG 1 cut(s) 201
AflII CTTAAG 1 cut(s) 1538
AgeI ACCGGT 1 cut(s) 936
AjnI CCWGG 2 cut(s) 705, 1177
AjuI GAANNNNNNNTTGG 2 cut(s) 1349, 1381
AloI GAACNNNNNNTCC 2 cut(s) 1336, 1368
AluBI AGCT 8 cut(s) 110, 473, 814, 919, 964, 1137, 1272, 1543
AluI AGCT 8 cut(s) 110, 473, 814, 919, 964, 1137, 1272, 1543
Alw26I GTCTC 3 cut(s) 74, 707, 1560
AlwI GGATC 8 cut(s) 362, 410, 423, 506, 703, 1169, 1467, 1492
Aor13HI TCCGGA 1 cut(s) 1619
AoxI GGCC 2 cut(s) 342, 582
ApeKI GCWGC 2 cut(s) 632, 814
ApoI RAATTY 6 cut(s) 15, 21, 285, 830, 1357, 1489
AsiGI ACCGGT 1 cut(s) 936
Asp700I GAANNNNTTC 2 cut(s) 1082, 1254
AspA2I CCTAGG 1 cut(s) 122
AspS9I GGNCC 3 cut(s) 343, 1235, 1421
AsuII TTCGAA 2 cut(s) 853, 1258
AvaII GGWCC 2 cut(s) 1235, 1421
AvrII CCTAGG 1 cut(s) 122
BalI TGGCCA 1 cut(s) 584
BamHI GGATCC 1 cut(s) 415
BbsI GAAGAC 1 cut(s) 1667
BbvI GCAGC 2 cut(s) 644, 801
BccI CCATC 2 cut(s) 1176, 1563
BciT130I CCWGG 2 cut(s) 707, 1179
BcoDI GTCTC 3 cut(s) 74, 707, 1560
BfaI CTAG 4 cut(s) 123, 686, 1559, 1574
BfmI CTRYAG 1 cut(s) 1519
BfrI CTTAAG 1 cut(s) 1538
BglII AGATCT 1 cut(s) 800
BisI GCNGC 2 cut(s) 633, 815
BlnI CCTAGG 1 cut(s) 122
BlsI GCNGC 2 cut(s) 634, 816
BmcAI AGTACT 2 cut(s) 234, 302
Bme1390I CCNGG 2 cut(s) 707, 1179
Bme18I GGWCC 2 cut(s) 1235, 1421
BmgT120I GGNCC 3 cut(s) 343, 1235, 1421
BmiI GGNNCC 5 cut(s) 417, 432, 438, 1007, 1188
BmrFI CCNGG 2 cut(s) 707, 1179
BmrI ACTGGG 1 cut(s) 1098
BmsI GCATC 1 cut(s) 200
BmuI ACTGGG 1 cut(s) 1098
BoxI GACNNNNGTC 1 cut(s) 1045
BpiI GAAGAC 1 cut(s) 1667
BpmI CTGGAG 1 cut(s) 1076
Bpu10I CCTNAGC 1 cut(s) 960
Bpu14I TTCGAA 2 cut(s) 853, 1258
BpuEI CTTGAG 1 cut(s) 1159
BsaAI YACGTR 1 cut(s) 165
BsaI GGTCTC 2 cut(s) 707, 1560
BsaJI CCNNGG 4 cut(s) 122, 339, 706, 1699
BsaWI WCCGGW 4 cut(s) 433, 936, 1016, 1619
BsaXI ACNNNNNCTCC 2 cut(s) 475, 505
Bsc4I CCNNNNNNNGG 1 cut(s) 201
Bse118I RCCGGY 1 cut(s) 936
Bse1I ACTGG 1 cut(s) 1093
Bse3DI GCAATG 1 cut(s) 1615
BseAI TCCGGA 1 cut(s) 1619
BseBI CCWGG 2 cut(s) 707, 1179
BseDI CCNNGG 4 cut(s) 122, 339, 706, 1699
BseGI GGATG 4 cut(s) 191, 1148, 1187, 1695
BseLI CCNNNNNNNGG 1 cut(s) 201
BseMI GCAATG 1 cut(s) 1615
BseMII CTCAG 3 cut(s) 801, 849, 966
BseNI ACTGG 1 cut(s) 1093
BseRI GAGGAG 4 cut(s) 387, 447, 450, 483
BseXI GCAGC 2 cut(s) 644, 801
BseYI CCCAGC 1 cut(s) 345
BshFI GGCC 2 cut(s) 344, 584
BshTI ACCGGT 1 cut(s) 936
BsiSI CCGG 5 cut(s) 434, 736, 937, 1017, 1620
BslFI GGGAC 1 cut(s) 635
BslI CCNNNNNNNGG 1 cut(s) 201
BsmAI GTCTC 3 cut(s) 74, 707, 1560
BsmFI GGGAC 1 cut(s) 635
BsmI GAATGC 1 cut(s) 687
BsnI GGCC 2 cut(s) 344, 584
Bso31I GGTCTC 2 cut(s) 707, 1560
Bsp119I TTCGAA 2 cut(s) 853, 1258
Bsp13I TCCGGA 1 cut(s) 1619
Bsp143I GATC 9 cut(s) 36, 367, 415, 511, 695, 800, 1174, 1459, 1484
BspACI CCGC 2 cut(s) 500, 1238
BspANI GGCC 2 cut(s) 344, 584
BspCNI CTCAG 3 cut(s) 802, 848, 965
BspEI TCCGGA 1 cut(s) 1619
BspLI GGNNCC 5 cut(s) 417, 432, 438, 1007, 1188
BspPI GGATC 8 cut(s) 362, 410, 423, 506, 703, 1169, 1467, 1492
BspT104I TTCGAA 2 cut(s) 853, 1258
BspTI CTTAAG 1 cut(s) 1538
BspTNI GGTCTC 2 cut(s) 707, 1560
BsrDI GCAATG 1 cut(s) 1615
BsrFI RCCGGY 1 cut(s) 936
BsrI ACTGG 1 cut(s) 1093
BssAI RCCGGY 1 cut(s) 936
BssECI CCNNGG 4 cut(s) 122, 339, 706, 1699
BssMI GATC 9 cut(s) 36, 367, 415, 511, 695, 800, 1174, 1459, 1484
BssT1I CCWWGG 3 cut(s) 122, 339, 1699
Bst2UI CCWGG 2 cut(s) 707, 1179
Bst4CI ACNGT 2 cut(s) 1010, 1523
Bst6I CTCTTC 1 cut(s) 415
BstAFI CTTAAG 1 cut(s) 1538
BstBAI YACGTR 1 cut(s) 165
BstBI TTCGAA 2 cut(s) 853, 1258
BstC8I GCNNGC 3 cut(s) 645, 669, 1507
BstDEI CTNAG 6 cut(s) 49, 731, 810, 835, 952, 960
BstF5I GGATG 4 cut(s) 191, 1148, 1187, 1695
BstKTI GATC 9 cut(s) 39, 370, 418, 514, 698, 803, 1177, 1462, 1487
BstMAI GTCTC 3 cut(s) 74, 707, 1560
BstMBI GATC 9 cut(s) 36, 367, 415, 511, 695, 800, 1174, 1459, 1484
BstMWI GCNNNNNNNGC 4 cut(s) 116, 581, 632, 916
BstNI CCWGG 2 cut(s) 707, 1179
BstNSI RCATGY 2 cut(s) 647, 884
BstPAI GACNNNNGTC 1 cut(s) 1045
BstSCI CCNGG 2 cut(s) 705, 1177
BstSFI CTRYAG 1 cut(s) 1519
BstSNI TACGTA 1 cut(s) 165
BstV1I GCAGC 2 cut(s) 644, 801
BstV2I GAAGAC 1 cut(s) 1667
BstX2I RGATCY 4 cut(s) 415, 695, 800, 1459
BstXI CCANNNNNNTGG 1 cut(s) 1562
BstYI RGATCY 4 cut(s) 415, 695, 800, 1459
BsuRI GGCC 2 cut(s) 344, 584
BtsCI GGATG 4 cut(s) 191, 1148, 1187, 1695
BtsIMutI CAGTG 4 cut(s) 274, 861, 960, 1086
Cac8I GCNNGC 3 cut(s) 645, 669, 1507
Cfr10I RCCGGY 1 cut(s) 936
Cfr13I GGNCC 3 cut(s) 343, 1235, 1421
Csp6I GTAC 5 cut(s) 178, 233, 301, 661, 934
CspAI ACCGGT 1 cut(s) 936
CviAII CATG 4 cut(s) 580, 644, 844, 881
CviQI GTAC 5 cut(s) 178, 233, 301, 661, 934
DdeI CTNAG 6 cut(s) 49, 731, 810, 835, 952, 960
DpnI GATC 9 cut(s) 38, 369, 417, 513, 697, 802, 1176, 1461, 1486
DpnII GATC 9 cut(s) 36, 367, 415, 511, 695, 800, 1174, 1459, 1484
DrdI GACNNNNNNGTC 1 cut(s) 779
DseDI GACNNNNNNGTC 1 cut(s) 779
EaeI YGGCCR 1 cut(s) 582
Eam1104I CTCTTC 1 cut(s) 415
EarI CTCTTC 1 cut(s) 415
Eco105I TACGTA 1 cut(s) 165
Eco130I CCWWGG 3 cut(s) 122, 339, 1699
Eco31I GGTCTC 2 cut(s) 707, 1560
Eco47I GGWCC 2 cut(s) 1235, 1421
Eco57I CTGAAG 1 cut(s) 798
EcoRI GAATTC 2 cut(s) 830, 1357
EcoRII CCWGG 2 cut(s) 705, 1177
EcoT14I CCWWGG 3 cut(s) 122, 339, 1699
ErhI CCWWGG 3 cut(s) 122, 339, 1699
FaeI CATG 4 cut(s) 583, 647, 847, 884
FalI AAGNNNNNCTT 4 cut(s) 790, 822, 1517, 1549
FaqI GGGAC 1 cut(s) 635
FatI CATG 4 cut(s) 579, 643, 843, 880
FauI CCCGC 1 cut(s) 507
Fnu4HI GCNGC 2 cut(s) 633, 815
FokI GGATG 4 cut(s) 178, 1135, 1194, 1682
Fsp4HI GCNGC 2 cut(s) 633, 815
FspBI CTAG 4 cut(s) 123, 686, 1559, 1574
GluI GCNGC 2 cut(s) 633, 815
GsaI CCCAGC 1 cut(s) 349
GsuI CTGGAG 1 cut(s) 1076
HaeIII GGCC 2 cut(s) 344, 584
HapII CCGG 5 cut(s) 434, 736, 937, 1017, 1620
Hin1II CATG 4 cut(s) 583, 647, 847, 884
HincII GTYRAC 1 cut(s) 1530
HindII GTYRAC 1 cut(s) 1530
HindIII AAGCTT 1 cut(s) 917
HinfI GANTC 5 cut(s) 332, 711, 866, 1255, 1435
HpaII CCGG 5 cut(s) 434, 736, 937, 1017, 1620
Hpy166II GTNNAC 1 cut(s) 1530
Hpy188I TCNGA 8 cut(s) 318, 367, 415, 811, 838, 1102, 1356, 1444
Hpy188III TCNNGA 7 cut(s) 34, 1055, 1247, 1482, 1574, 1595, 1620
Hpy8I GTNNAC 1 cut(s) 1530
HpyAV CCTTC 6 cut(s) 413, 816, 1014, 1412, 1440, 1580
HpyCH4III ACNGT 2 cut(s) 1010, 1523
HpyCH4IV ACGT 2 cut(s) 164, 180
HpyF10VI GCNNNNNNNGC 4 cut(s) 116, 581, 632, 916
HpyF3I CTNAG 6 cut(s) 49, 731, 810, 835, 952, 960
HpySE526I ACGT 2 cut(s) 164, 180
Hsp92II CATG 4 cut(s) 583, 647, 847, 884
Kpn2I TCCGGA 1 cut(s) 1619
Kzo9I GATC 9 cut(s) 36, 367, 415, 511, 695, 800, 1174, 1459, 1484
LmnI GCTCC 2 cut(s) 436, 1548
Lsp1109I GCAGC 2 cut(s) 644, 801
LweI GCATC 1 cut(s) 200
MaeI CTAG 4 cut(s) 123, 686, 1559, 1574
MaeII ACGT 2 cut(s) 164, 180
MaeIII GTNAC 1 cut(s) 673
MalI GATC 9 cut(s) 38, 369, 417, 513, 697, 802, 1176, 1461, 1486
MboI GATC 9 cut(s) 36, 367, 415, 511, 695, 800, 1174, 1459, 1484
MboII GAAGA 4 cut(s) 22, 402, 1443, 1672
MfeI CAATTG 1 cut(s) 1199
MflI RGATCY 4 cut(s) 415, 695, 800, 1459
MlsI TGGCCA 1 cut(s) 584
MluNI TGGCCA 1 cut(s) 584
MmeI TCCRAC 3 cut(s) 506, 1176, 1543
Mox20I TGGCCA 1 cut(s) 584
MroI TCCGGA 1 cut(s) 1619
MroXI GAANNNNTTC 2 cut(s) 1082, 1254
MscI TGGCCA 1 cut(s) 584
MseI TTAA 5 cut(s) 797, 1013, 1217, 1539, 1601
MslI CAYNNNNRTG 1 cut(s) 1397
Msp20I TGGCCA 1 cut(s) 584
MspA1I CMGCKG 1 cut(s) 502
MspCI CTTAAG 1 cut(s) 1538
MspI CCGG 5 cut(s) 434, 736, 937, 1017, 1620
MspR9I CCNGG 2 cut(s) 707, 1179
MunI CAATTG 1 cut(s) 1199
Mva1269I GAATGC 1 cut(s) 687
MvaI CCWGG 2 cut(s) 707, 1179
MwoI GCNNNNNNNGC 4 cut(s) 116, 581, 632, 916
NdeII GATC 9 cut(s) 36, 367, 415, 511, 695, 800, 1174, 1459, 1484
NlaIII CATG 4 cut(s) 583, 647, 847, 884
NlaIV GGNNCC 5 cut(s) 417, 432, 438, 1007, 1188
NspI RCATGY 2 cut(s) 647, 884
NspV TTCGAA 2 cut(s) 853, 1258
PaeI GCATGC 1 cut(s) 647
PctI GAATGC 1 cut(s) 687
PdmI GAANNNNTTC 2 cut(s) 1082, 1254
PfeI GAWTC 5 cut(s) 332, 711, 866, 1255, 1435
PfoI TCCNGGA 1 cut(s) 1177
PinAI ACCGGT 1 cut(s) 936
PkrI GCNGC 2 cut(s) 634, 816
Ppu21I YACGTR 1 cut(s) 165
PshAI GACNNNNGTC 1 cut(s) 1045
PsiI TTATAA 1 cut(s) 150
Psp6I CCWGG 2 cut(s) 705, 1177
PspFI CCCAGC 1 cut(s) 345
PspGI CCWGG 2 cut(s) 705, 1177
PspN4I GGNNCC 5 cut(s) 417, 432, 438, 1007, 1188
PspPI GGNCC 3 cut(s) 343, 1235, 1421
PsuI RGATCY 4 cut(s) 415, 695, 800, 1459
RsaI GTAC 5 cut(s) 179, 234, 302, 662, 935
RsaNI GTAC 5 cut(s) 178, 233, 301, 661, 934
RseI CAYNNNNRTG 1 cut(s) 1397
SaqAI TTAA 5 cut(s) 797, 1013, 1217, 1539, 1601
SatI GCNGC 2 cut(s) 633, 815
Sau3AI GATC 9 cut(s) 36, 367, 415, 511, 695, 800, 1174, 1459, 1484
Sau96I GGNCC 3 cut(s) 343, 1235, 1421
ScaI AGTACT 2 cut(s) 234, 302
ScrFI CCNGG 2 cut(s) 707, 1179
SfaNI GCATC 1 cut(s) 200
SfcI CTRYAG 1 cut(s) 1519
SfuI TTCGAA 2 cut(s) 853, 1258
SinI GGWCC 2 cut(s) 1235, 1421
SmiMI CAYNNNNRTG 1 cut(s) 1397
SmlI CTYRAG 2 cut(s) 1138, 1538
SmoI CTYRAG 2 cut(s) 1138, 1538
SnaBI TACGTA 1 cut(s) 165
SphI GCATGC 1 cut(s) 647
SsiI CCGC 2 cut(s) 500, 1238
SspMI CTAG 4 cut(s) 123, 686, 1559, 1574
StyD4I CCNGG 2 cut(s) 705, 1177
StyI CCWWGG 3 cut(s) 122, 339, 1699
TaaI ACNGT 2 cut(s) 1010, 1523
TaiI ACGT 2 cut(s) 167, 183
TaqI TCGA 6 cut(s) 8, 35, 218, 853, 1258, 1433
TatI WGTACW 3 cut(s) 232, 300, 660
TfiI GAWTC 5 cut(s) 332, 711, 866, 1255, 1435
Tru1I TTAA 5 cut(s) 797, 1013, 1217, 1539, 1601
Tru9I TTAA 5 cut(s) 797, 1013, 1217, 1539, 1601
TscAI CASTG 4 cut(s) 274, 868, 960, 1093
TseI GCWGC 2 cut(s) 632, 814
TspDTI ATGAA 4 cut(s) 201, 807, 966, 1684
TspRI CASTG 4 cut(s) 274, 868, 960, 1093
Vha464I CTTAAG 1 cut(s) 1538
VpaK11BI GGWCC 2 cut(s) 1235, 1421
XapI RAATTY 6 cut(s) 15, 21, 285, 830, 1357, 1489
XbaI TCTAGA 1 cut(s) 1573
XceI RCATGY 2 cut(s) 647, 884
XmaJI CCTAGG 1 cut(s) 122
XmnI GAANNNNTTC 2 cut(s) 1082, 1254
XspI CTAG 4 cut(s) 123, 686, 1559, 1574
ZrmI AGTACT 2 cut(s) 234, 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.