Rw7G020460

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
23265518 .. 23268241
2724 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G020460.1

Sequence Viewer

Length: 2724 bp
ATGAGTGGTAGGCGTATACATTCTGTTTTGGTTGGGCTTCTATGCCTGGTCATTGCCTCTACTATTTGTTGTTCTAGTAGTGTTGGAACCTCCAGCATTCTGTGCTTGGAGAGTGAAAGACATGTTCTTCTCCGGTTTAAACAAGGCCTTGTGGATGAGTCCAATGCTCTTGCTTCTTGGAAAAGTGATACAGATTGCTGCCAGTTTAGAGGAATCGCATGCAACAACCAAACAGGTCATGTCATCACTCTAAATCTCTGTATTTTTTATGATGATTACATGTATGCTGCAACTCCTTTAATTGGTGAAATTGATCCTTCACTACTTGAATTACGACATCTAAATCACTTGGACCTCAGTTTCAATGATTTTGAAGGAATGATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGCACAAGCTAATTTCAGCGGATCTGTTCCACCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTGGAACGAATTTCTTAGTTCTGAAAATATTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCAGGTGTAGATTTGTCAAAGGTTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTCACTGATAGAGCTTCAGTTATCTTGGTGTCATCTTCCTGATGTCAATCTAAGATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAAGTCCTTGACCTCTCTCAGAACTCTCTTATTAATTCTTCAATATTTCATTGGATAGCCAATGTCAGCAACAACTTTGTTCATATTCAATTATCAGATAATGATTTACAAGGTCCCATACCAGCTCATGTTTTCACAAGCATGGTTTCTCTAGGCTCTCTAGATCTCTCTGGTAACTTACTTGAAGGTGGGATGACAAAGGCCTTTCAAAACTTATGCAGCTTAGAATCGTTGGTTTTAGCTGCAAACCAATTCTCTGAAAACATTCAGGACTCTTTAGAAACCTTGTCCTGTGCTGAGGACACACTTGAGAGCTTGGACTTGAGTGATAACTGGTTTTGGGGTTCATTTCCAGAATTGACAGGTTTTTCAAAGCTGAGAGAGTTTCGTCTCCATGATAATACTCTAAACGGGTCAATACCCGAGAGTGTCGGGCAACTTTCTTGCCTTGAACATCTGGATCTTTTTGGGAATTCTTTGAATGCTGTCATAACAGAAGCCCACCTTTTGAACCTCTCTAGTTTGAAGCATTTGGATGTTTCTAATAATACAGCTTTGTCTATCACCCTGAGCTCAGATTGGAATCCACCATTTCAACTTGATACGTTAGGCATGTCCTCTTGCAAGGTGGGACCAGCATTTCCAAAATGGATTCAAACGCAGAGAAATCTTACTCGGCTTTCTTTGGATAATGCTAGTATATCAGATTCCTTACCTAGTAATTTTTGGGATCTATTTTCTGACTTAGAGGAATTAGATCTGTCTAGGAATAAAATTCGTGGAAAACTGCCGGATCTGCCATCATTTCCTCCGGGGCTCATCACTTTGTATCTCTCGAATAACATGTTTTCAGGATCCTTGTCTTCCGTATGTGCAACACAGGCTCCACAGTTGAATTTTCTTGACCTTTCTGAGAACCTACTGTCAGGGGAGCTTCCTAATTGTTGGATGTCATTTCAACTATTAGACATATTGTATTTGGGAAAGAATAAATTATCTGGGAAATTACCAAGCTCATTAGGGAATTTAGAGGCAATTAGCGTATTGGGTTTACATAGTAACAACTTTTCAGGAGAATTGCCTTCTTTAAAGAACTGTACAAGATTAACCATTCTTGACCTTGGGAACAATAACCTGTCTGGAAAGATACCATCATGGATAAACCAAAACCTAAAATATTTGAGAGCTCTTCGCCTAAGGTCCAATATGTTCAATGGAATCATACCCTTTTCCATGTGCGGTCTAACCACCATTCATGTCTTGGACCTCTCTCAGAATAATATATCAGGAGCCTTGCCATATTGCTTTAATAACATATTAGCTTTGGCTGATGATGCTACGTATGATATTATGAATGTAGAATTGGTGTGGAAAGGGATAGAGATTGAGTTTGGGGAAAATCTTCAGTTTCTGAGAAGCATTGACATTTCAAGCAATTATTTGGTTGGGGAAATTCCACAAAGCATAACAAGTATGTCAAAGTTGAATTCTCTGAACCTGTCAAGAAACAATTTGACAGGAAAGGTTCCTGAAAACTTTGGGAATTTGAAGAAGTTAGAGTCTCTCGATTTGTCAAGAAACCAGATATCTGGTAGAATTCCTTCAAGTTTTTCGAGCTTAAATTTTCTTGAAGTCTTGGACGTATCACACAACCACTTGTCCGGAGAAATTCCACTAGGCACCCAACTTCAAACTTTTAATGCTTCTGCATATATGGGAAACCTTGGACTTTGTGGACCACCACTGACACCAAATTGTTCAGGAGATGGAACAACTCAAGTTCATGATAACAAAGAACATGATAATGATGGTCTCATAAACTTGGGATTCTTTATCAGTACAGTGCTGGGATTCATCACAGGATTCTGGGTGGTTTGTGGTAGTTTAGTGCTAAAGAGTTCTTGGAGATACGCCTATTTCAAATTCCTGGATGATTCAAGAGATTGGGTTTATGTCAAAGCCGTTGTCTACAAGGCCAAAATGCAGAAGAGACCTCGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

907

Amino Acids

100.36

Weight (kDa)

5.24

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 75 1.4e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 105 - 337 9.2e-09 Leucine-rich repeat region
LRR_8 PF13855 269 - 325 4.7e-06 Leucine rich repeat
LRR_8 PF13855 608 - 668 4.6e-06 Leucine rich repeat
LRR_14 PF23598 707 - 791 3.9e-07 Leucine-rich repeat region
LRR_8 PF13855 711 - 769 6.7e-11 Leucine rich repeat
LRR_8 PF13855 734 - 793 1.1e-10 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2399
AccI GTMKAC 2 cut(s) 16, 2688
AccIII TCCGGA 1 cut(s) 2381
AciI CCGC 2 cut(s) 447, 1959
AclWI GGATC 7 cut(s) 308, 457, 1188, 1458, 1521, 1569, 1582
AcoI YGGCCR 1 cut(s) 608
AcuI CTGAAG 2 cut(s) 632, 2108
AfaI GTAC 2 cut(s) 1819, 2560
AfiI CCNNNNNNNGG 2 cut(s) 302, 467
AflIII ACRYGT 4 cut(s) 121, 279, 573, 1563
AjnI CCWGG 3 cut(s) 45, 503, 2646
AjuI GAANNNNNNNTTGG 2 cut(s) 2066, 2098
Alw21I GWGCWC 2 cut(s) 1295, 1909
Alw26I GTCTC 4 cut(s) 1115, 2286, 2537, 2704
AlwI GGATC 7 cut(s) 308, 457, 1188, 1458, 1521, 1569, 1582
AlwNI CAGNNNCTG 1 cut(s) 2131
Ama87I CYCGRG 1 cut(s) 1142
Aor13HI TCCGGA 1 cut(s) 2381
AoxI GGCC 4 cut(s) 145, 608, 921, 2694
ApeKI GCWGC 4 cut(s) 198, 287, 939, 962
ArsI GACNNNNNNTTYG 2 cut(s) 2670, 2702
AseI ATTAAT 2 cut(s) 702, 753
Asp700I GAANNNNTTC 3 cut(s) 984, 2121, 2320
AspS9I GGNCC 6 cut(s) 352, 833, 1352, 1920, 1984, 2456
AsuC2I CCSGG 1 cut(s) 1533
AsuHPI GGTGA 2 cut(s) 317, 1276
AvaI CYCGRG 1 cut(s) 1142
AvaII GGWCC 6 cut(s) 352, 833, 1352, 1920, 1984, 2456
AxyI CCTNAGG 1 cut(s) 1916
BalI TGGCCA 1 cut(s) 610
BamHI GGATCC 1 cut(s) 1574
BanI GGYRCC 1 cut(s) 2399
BanII GRGCYC 3 cut(s) 1295, 1539, 1909
BarI GAAGNNNNNNTAC 2 cut(s) 2305, 2337
BbsI GAAGAC 1 cut(s) 1575
Bbv12I GWGCWC 2 cut(s) 1295, 1909
BbvCI CCTCAGC 1 cut(s) 1017
BbvI GCAGC 4 cut(s) 185, 274, 949, 951
BccI CCATC 4 cut(s) 1528, 1879, 2480, 2522
BceAI ACGGC 1 cut(s) 2666
BciT130I CCWGG 3 cut(s) 47, 505, 2648
BcnI CCSGG 1 cut(s) 1533
BcoDI GTCTC 4 cut(s) 1115, 2286, 2537, 2704
BfaI CTAG 8 cut(s) 75, 872, 881, 1239, 1416, 1437, 1485, 2396
BglII AGATCT 2 cut(s) 883, 1477
BisI GCNGC 4 cut(s) 199, 288, 940, 963
BlsI GCNGC 4 cut(s) 200, 289, 941, 964
Bme1390I CCNGG 4 cut(s) 47, 505, 1533, 2648
Bme18I GGWCC 6 cut(s) 352, 833, 1352, 1920, 1984, 2456
BmeT110I CYCGRG 1 cut(s) 1142
BmgT120I GGNCC 6 cut(s) 352, 833, 1352, 1920, 1984, 2456
BmiI GGNNCC 8 cut(s) 88, 835, 1353, 1576, 1605, 2011, 2247, 2401
BmrFI CCNGG 4 cut(s) 47, 505, 1533, 2648
BmsI GCATC 1 cut(s) 2044
BpiI GAAGAC 1 cut(s) 1575
BpmI CTGGAG 1 cut(s) 76
Bpu10I CCTNAGC 2 cut(s) 1017, 1289
BpuEI CTTGAG 4 cut(s) 580, 1049, 1063, 2481
BpuMI CCSGG 1 cut(s) 1533
BsaAI YACGTR 1 cut(s) 2061
BsaBI GATNNNNATC 2 cut(s) 678, 1302
BsaI GGTCTC 2 cut(s) 2537, 2704
BsaJI CCNNGG 3 cut(s) 1532, 1840, 2443
BsaWI WCCGGW 2 cut(s) 132, 2381
BsaXI ACNNNNNCTCC 2 cut(s) 1588, 1618
Bsc4I CCNNNNNNNGG 2 cut(s) 302, 467
Bse1I ACTGG 2 cut(s) 202, 1058
Bse21I CCTNAGG 1 cut(s) 1916
Bse3DI GCAATG 1 cut(s) 51
Bse8I GATNNNNATC 2 cut(s) 678, 1302
BseAI TCCGGA 1 cut(s) 2381
BseBI CCWGG 3 cut(s) 47, 505, 2648
BseDI CCNNGG 3 cut(s) 1532, 1840, 2443
BseGI GGATG 5 cut(s) 160, 918, 1261, 1674, 2656
BseJI GATNNNNATC 2 cut(s) 678, 1302
BseLI CCNNNNNNNGG 2 cut(s) 302, 467
BseMI GCAATG 1 cut(s) 51
BseMII CTCAG 9 cut(s) 370, 752, 1008, 1088, 1280, 1308, 1623, 2006, 2123
BseNI ACTGG 2 cut(s) 202, 1058
BseXI GCAGC 4 cut(s) 185, 274, 949, 951
BseYI CCCAGC 1 cut(s) 2566
BshFI GGCC 4 cut(s) 147, 610, 923, 2696
BshNI GGYRCC 1 cut(s) 2399
BsiHKAI GWGCWC 2 cut(s) 1295, 1909
BsiHKCI CYCGRG 1 cut(s) 1142
BsiSI CCGG 4 cut(s) 133, 1511, 1532, 2382
BslFI GGGAC 2 cut(s) 819, 1365
BslI CCNNNNNNNGG 2 cut(s) 302, 467
BsmAI GTCTC 4 cut(s) 1115, 2286, 2537, 2704
BsmBI CGTCTC 1 cut(s) 1115
BsmFI GGGAC 2 cut(s) 819, 1365
BsmI GAATGC 2 cut(s) 96, 1207
BsnI GGCC 4 cut(s) 147, 610, 923, 2696
Bso31I GGTCTC 2 cut(s) 2537, 2704
BsoBI CYCGRG 1 cut(s) 1142
Bsp1286I GDGCHC 3 cut(s) 1295, 1539, 1909
Bsp13I TCCGGA 1 cut(s) 2381
Bsp1407I TGTACA 1 cut(s) 1817
BspACI CCGC 2 cut(s) 447, 1959
BspANI GGCC 4 cut(s) 147, 610, 923, 2696
BspCNI CTCAG 9 cut(s) 369, 751, 1009, 1089, 1281, 1307, 1624, 2005, 2124
BspEI TCCGGA 1 cut(s) 2381
BspHI TCATGA 1 cut(s) 2503
BspLI GGNNCC 8 cut(s) 88, 835, 1353, 1576, 1605, 2011, 2247, 2401
BspPI GGATC 7 cut(s) 308, 457, 1188, 1458, 1521, 1569, 1582
BspQI GCTCTTC 1 cut(s) 1914
BspT107I GGYRCC 1 cut(s) 2399
BspTNI GGTCTC 2 cut(s) 2537, 2704
BsrDI GCAATG 1 cut(s) 51
BsrGI TGTACA 1 cut(s) 1817
BsrI ACTGG 2 cut(s) 202, 1058
BssECI CCNNGG 3 cut(s) 1532, 1840, 2443
BssNAI GTATAC 1 cut(s) 17
BssT1I CCWWGG 2 cut(s) 1840, 2443
Bst1107I GTATAC 1 cut(s) 17
Bst2UI CCWGG 3 cut(s) 47, 505, 2648
Bst4CI ACNGT 4 cut(s) 1611, 1644, 1817, 2563
Bst6I CTCTTC 3 cut(s) 723, 1914, 2702
BstAPI GCANNNNNTGC 1 cut(s) 102
BstAUI TGTACA 1 cut(s) 1817
BstBAI YACGTR 1 cut(s) 2061
BstC8I GCNNGC 2 cut(s) 220, 626
BstF5I GGATG 5 cut(s) 160, 918, 1261, 1674, 2656
BstMAI GTCTC 4 cut(s) 1115, 2286, 2537, 2704
BstMWI GCNNNNNNNGC 4 cut(s) 102, 1516, 1601, 2054
BstNI CCWGG 3 cut(s) 47, 505, 2648
BstNSI RCATGY 6 cut(s) 125, 222, 283, 577, 1336, 1567
BstSCI CCNGG 4 cut(s) 45, 503, 1531, 2646
BstSNI TACGTA 1 cut(s) 2061
BstV1I GCAGC 4 cut(s) 185, 274, 949, 951
BstV2I GAAGAC 1 cut(s) 1575
BstX2I RGATCY 7 cut(s) 449, 883, 1180, 1450, 1477, 1513, 1574
BstXI CCANNNNNNTGG 1 cut(s) 2309
BstYI RGATCY 7 cut(s) 449, 883, 1180, 1450, 1477, 1513, 1574
BstZ17I GTATAC 1 cut(s) 17
Bsu36I CCTNAGG 1 cut(s) 1916
BsuRI GGCC 4 cut(s) 147, 610, 923, 2696
BtsCI GGATG 5 cut(s) 160, 918, 1261, 1674, 2656
BtsIMutI CAGTG 3 cut(s) 635, 2462, 2568
Cac8I GCNNGC 2 cut(s) 220, 626
CaiI CAGNNNCTG 1 cut(s) 2131
CciI TCATGA 1 cut(s) 2503
Cfr13I GGNCC 6 cut(s) 352, 833, 1352, 1920, 1984, 2456
Csp6I GTAC 2 cut(s) 1818, 2559
CviQI GTAC 2 cut(s) 1818, 2559
DraI TTTAAA 2 cut(s) 139, 1809
EaeI YGGCCR 1 cut(s) 608
Eam1104I CTCTTC 3 cut(s) 723, 1914, 2702
EarI CTCTTC 3 cut(s) 723, 1914, 2702
Ecl136II GAGCTC 2 cut(s) 1293, 1907
Eco105I TACGTA 1 cut(s) 2061
Eco130I CCWWGG 2 cut(s) 1840, 2443
Eco147I AGGCCT 2 cut(s) 147, 923
Eco24I GRGCYC 3 cut(s) 1295, 1539, 1909
Eco31I GGTCTC 2 cut(s) 2537, 2704
Eco32I GATATC 1 cut(s) 2307
Eco47I GGWCC 6 cut(s) 352, 833, 1352, 1920, 1984, 2456
Eco53kI GAGCTC 2 cut(s) 1293, 1907
Eco57I CTGAAG 2 cut(s) 632, 2108
Eco81I CCTNAGG 1 cut(s) 1916
Eco88I CYCGRG 1 cut(s) 1142
EcoICRI GAGCTC 2 cut(s) 1293, 1907
EcoO109I RGGNCCY 1 cut(s) 833
EcoRI GAATTC 3 cut(s) 1192, 2206, 2316
EcoRII CCWGG 3 cut(s) 45, 503, 2646
EcoRV GATATC 1 cut(s) 2307
EcoT14I CCWWGG 2 cut(s) 1840, 2443
EcoT38I GRGCYC 3 cut(s) 1295, 1539, 1909
ErhI CCWWGG 2 cut(s) 1840, 2443
Esp3I CGTCTC 1 cut(s) 1115
FalI AAGNNNNNCTT 2 cut(s) 1209, 1241
FaqI GGGAC 2 cut(s) 819, 1365
FblI GTMKAC 2 cut(s) 16, 2688
Fnu4HI GCNGC 4 cut(s) 199, 288, 940, 963
FokI GGATG 5 cut(s) 167, 925, 1268, 1681, 2663
FriOI GRGCYC 3 cut(s) 1295, 1539, 1909
Fsp4HI GCNGC 4 cut(s) 199, 288, 940, 963
FspBI CTAG 8 cut(s) 75, 872, 881, 1239, 1416, 1437, 1485, 2396
GluI GCNGC 4 cut(s) 199, 288, 940, 963
GsaI CCCAGC 1 cut(s) 2570
GsuI CTGGAG 1 cut(s) 76
HaeIII GGCC 4 cut(s) 147, 610, 923, 2696
HapII CCGG 4 cut(s) 133, 1511, 1532, 2382
HpaII CCGG 4 cut(s) 133, 1511, 1532, 2382
HphI GGTGA 2 cut(s) 317, 1276
Hpy166II GTNNAC 4 cut(s) 17, 1772, 2456, 2689
Hpy8I GTNNAC 4 cut(s) 17, 1772, 2456, 2689
HpyAV CCTTC 5 cut(s) 327, 368, 899, 1812, 2331
HpyCH4III ACNGT 4 cut(s) 1611, 1644, 1817, 2563
HpyCH4IV ACGT 3 cut(s) 1325, 2060, 2361
HpyF10VI GCNNNNNNNGC 4 cut(s) 102, 1516, 1601, 2054
HpySE526I ACGT 3 cut(s) 1325, 2060, 2361
Kpn2I TCCGGA 1 cut(s) 2381
LguI GCTCTTC 1 cut(s) 1914
LmnI GCTCC 3 cut(s) 1609, 1651, 2009
Lsp1109I GCAGC 4 cut(s) 185, 274, 949, 951
LweI GCATC 1 cut(s) 2044
MaeI CTAG 8 cut(s) 75, 872, 881, 1239, 1416, 1437, 1485, 2396
MaeII ACGT 3 cut(s) 1325, 2060, 2361
MaeIII GTNAC 2 cut(s) 893, 1778
MfeI CAATTG 1 cut(s) 410
MflI RGATCY 7 cut(s) 449, 883, 1180, 1450, 1477, 1513, 1574
MhlI GDGCHC 3 cut(s) 1295, 1539, 1909
MlsI TGGCCA 1 cut(s) 610
MluNI TGGCCA 1 cut(s) 610
MlyI GAGTC 4 cut(s) 167, 415, 986, 2288
MmeI TCCRAC 2 cut(s) 64, 1646
Mox20I TGGCCA 1 cut(s) 610
MroI TCCGGA 1 cut(s) 2381
MroXI GAANNNNTTC 3 cut(s) 984, 2121, 2320
MscI TGGCCA 1 cut(s) 610
MslI CAYNNNNRTG 3 cut(s) 860, 1254, 2523
Msp20I TGGCCA 1 cut(s) 610
MspA1I CMGCKG 1 cut(s) 447
MspI CCGG 4 cut(s) 133, 1511, 1532, 2382
MspR9I CCNGG 4 cut(s) 47, 505, 1533, 2648
MssI GTTTAAAC 1 cut(s) 139
MunI CAATTG 1 cut(s) 410
Mva1269I GAATGC 2 cut(s) 96, 1207
MvaI CCWGG 3 cut(s) 47, 505, 2648
MwoI GCNNNNNNNGC 4 cut(s) 102, 1516, 1601, 2054
NciI CCSGG 1 cut(s) 1533
NlaIV GGNNCC 8 cut(s) 88, 835, 1353, 1576, 1605, 2011, 2247, 2401
NmeAIII GCCGAG 1 cut(s) 1375
NspI RCATGY 6 cut(s) 125, 222, 283, 577, 1336, 1567
PaeI GCATGC 1 cut(s) 222
PagI TCATGA 1 cut(s) 2503
PceI AGGCCT 2 cut(s) 147, 923
PciI ACATGT 4 cut(s) 121, 279, 573, 1563
PciSI GCTCTTC 1 cut(s) 1914
PctI GAATGC 2 cut(s) 96, 1207
PdmI GAANNNNTTC 3 cut(s) 984, 2121, 2320
PfoI TCCNGGA 2 cut(s) 503, 2646
PkrI GCNGC 4 cut(s) 200, 289, 941, 964
PleI GAGTC 4 cut(s) 166, 414, 986, 2287
PmeI GTTTAAAC 1 cut(s) 139
PpsI GAGTC 4 cut(s) 166, 414, 986, 2287
Ppu21I YACGTR 1 cut(s) 2061
PpuMI RGGWCCY 1 cut(s) 833
PscI ACATGT 4 cut(s) 121, 279, 573, 1563
PshBI ATTAAT 2 cut(s) 702, 753
Psp124BI GAGCTC 2 cut(s) 1295, 1909
Psp5II RGGWCCY 1 cut(s) 833
Psp6I CCWGG 3 cut(s) 45, 503, 2646
PspFI CCCAGC 1 cut(s) 2566
PspGI CCWGG 3 cut(s) 45, 503, 2646
PspN4I GGNNCC 8 cut(s) 88, 835, 1353, 1576, 1605, 2011, 2247, 2401
PspPI GGNCC 6 cut(s) 352, 833, 1352, 1920, 1984, 2456
PspPPI RGGWCCY 1 cut(s) 833
PstNI CAGNNNCTG 1 cut(s) 2131
PsuI RGATCY 7 cut(s) 449, 883, 1180, 1450, 1477, 1513, 1574
RsaI GTAC 2 cut(s) 1819, 2560
RsaNI GTAC 2 cut(s) 1818, 2559
RseI CAYNNNNRTG 3 cut(s) 860, 1254, 2523
SacI GAGCTC 2 cut(s) 1295, 1909
SapI GCTCTTC 1 cut(s) 1914
SatI GCNGC 4 cut(s) 199, 288, 940, 963
Sau96I GGNCC 6 cut(s) 352, 833, 1352, 1920, 1984, 2456
SchI GAGTC 4 cut(s) 167, 415, 986, 2288
ScrFI CCNGG 4 cut(s) 47, 505, 1533, 2648
SduI GDGCHC 3 cut(s) 1295, 1539, 1909
SfaNI GCATC 1 cut(s) 2044
SinI GGWCC 6 cut(s) 352, 833, 1352, 1920, 1984, 2456
SmiMI CAYNNNNRTG 3 cut(s) 860, 1254, 2523
SmlI CTYRAG 4 cut(s) 559, 1028, 1042, 2496
SmoI CTYRAG 4 cut(s) 559, 1028, 1042, 2496
SnaBI TACGTA 1 cut(s) 2061
SphI GCATGC 1 cut(s) 222
SseBI AGGCCT 2 cut(s) 147, 923
SsiI CCGC 2 cut(s) 447, 1959
SspI AATATT 3 cut(s) 532, 765, 1898
SspMI CTAG 8 cut(s) 75, 872, 881, 1239, 1416, 1437, 1485, 2396
SstI GAGCTC 2 cut(s) 1295, 1909
StuI AGGCCT 2 cut(s) 147, 923
StyD4I CCNGG 4 cut(s) 45, 503, 1531, 2646
StyI CCWWGG 2 cut(s) 1840, 2443
TaaI ACNGT 4 cut(s) 1611, 1644, 1817, 2563
TaiI ACGT 3 cut(s) 1328, 2063, 2364
TaqI TCGA 4 cut(s) 1556, 2286, 2333, 2716
TatI WGTACW 2 cut(s) 1817, 2558
TscAI CASTG 3 cut(s) 642, 2469, 2568
TseI GCWGC 4 cut(s) 198, 287, 939, 962
TspDTI ATGAA 8 cut(s) 382, 758, 791, 1056, 1964, 2087, 2492, 2563
TspGWI ACGGA 1 cut(s) 1576
TspRI CASTG 3 cut(s) 642, 2469, 2568
VpaK11BI GGWCC 6 cut(s) 352, 833, 1352, 1920, 1984, 2456
VspI ATTAAT 2 cut(s) 702, 753
XbaI TCTAGA 1 cut(s) 880
XceI RCATGY 6 cut(s) 125, 222, 283, 577, 1336, 1567
XcmI CCANNNNNNNNNTGG 1 cut(s) 1978
XmiI GTMKAC 2 cut(s) 16, 2688
XmnI GAANNNNTTC 3 cut(s) 984, 2121, 2320
XspI CTAG 8 cut(s) 75, 872, 881, 1239, 1416, 1437, 1485, 2396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.