Rh5AG455200

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
77991069 .. 78002391
11323 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG455200.1

Sequence Viewer

Length: 1707 bp
ATGTGCCTCAAACTCTTTTATCCACTTGTGGTGCTTTTGCTGCACATGAGCCCCCTTGGATTTGTTTCTGGACTTTGGCGTGGGGCCACAAATATCAGGTGCATAGAGAAGGAAAGGCAAGCTCTCCTTGCAGTAAAACAAGGTCTCGTGGGCAATCTTTTTCTTTCTTCATGGGGAAGCAACGAGACAACAGATTGTTGCAACCAAATTGGTCATGTTACTGAACTTGATCTTTATTCCCTAGCGCCAGGTTTGCCTCTGCCAGTTGATCTCTCTGAAAACCATCTCACCTTTTCAATATTCCATTGGTTGTCAACCTACAATACAAGCCTTGTTTCCGTTGACCTTTATGAAAACAACTTAAGTGGTTCAATTCCTGATGTTTTCGGCGACCTGAGTTCTCTCCAGCATCTAAGTCTTGCTGATAACTCGGTAGAGGGACAACTCCCAAAAACAGTTGGCCGGTTATGCAGTTTGCAATCATTGGACCTTTCTCGCAACAATTTAAGTGGTTCAATTCCTGATGTTTTCGGCAACCTGAGTTCTCTCCTGCATCTAAGTCTTGCTGATAACTCGGTAGAGGGACAACTCCCAAAAACAGTTGGCCGGTTATGCAGTTTGCAATCATTGGACCTTTCTCGCAACAATTTAAGTGGTTCAATTCCTGATGTTTTCGGCAACCTGAGTTCTCTCCTGCATCTAAGTCTTGATTTTAACTCGGTAGAGGGACAACTCCCAAAAACAGTTGGCCGGTTATGCAGTTTGCAATCATTGGACATTTCTCACAACAACTTACGTGGTTCAATTCCTGATGTTTTCGGCAACCTGAGTTCTCTCATGGATCTATTTCTTGGTTTTAACTCAATAGAAGGACAAATCCCAAAAACAGTTGGCCGGTTATGCAGTTTGCAATTATTGGACTTTTCTCACAACAACTTAAGTGGTTCAATTCCTGATGTTTTCGGCAACCTGAGTTCTCTCATGCATCTATATCTTGGTTTTAACTCAATAGAAGGACAACTCCCAAAAACAATTGGTCGGTTATGCAGTCTGCAATCATTGGACCTTTCAAGAAATAATCACAGTGGTGAGTTTTCGGAGTATATTCAAGTATTATTTGGCTGTGCTGGGAACTCATTGAGATCAGTATATCTCTCTGGCAATCAACTGACTGGAAGAATGCCTGAAAGAATAGGTTCATTTTCCAACTTGGTAGATTTTAATGTTAGTATGAACTCTTTGACAGGAGTGATTACGGAAGCTCATTTCTCAAACCTCTCCAAACTGCAAGTTTTGGATTTATCTTCCAATTCACTAACTTTGAACATTCGTTCTGATTGGCTTCCTCCTTTTCAACTTCTCAGAATAAGCTTAATGTCTTGCAAAATCGGGCCATATTTCCCAAAATGGCTTCGAACATCTCTGAGAAGCTTTTACGAGCTTGATCTTTCTGATGCTGGAATTTCTGATATCATTCCAAGCTGGTTTCAAGATAACTCTATGAAAGTCTCTCAATATAGTGTTTTAAATTTGAGTTCAAACCAATTGAAAGGGCCAATTCACTCGCTACCATCAGAACTGTCATCTCTGGATCTATCCAATTCCAAAATCTTGACATCAGAGAGATCCACATTAGTCCCCTGCTTCAATTGTTCTAGAAGAGCTGGTGGAACTAAAGACAGGGTGGGGAAAGATAACAAAAGGTAA

Protein Analysis

568

Amino Acids

62.2

Weight (kDa)

6.11

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 68 9.1e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 129 - 240 6.7e-13 Leucine-rich repeat region
LRR_14 PF23598 178 - 280 2.6e-11 Leucine-rich repeat region
LRR_14 PF23598 226 - 413 7e-17 Leucine-rich repeat region
LRR_8 PF13855 254 - 313 6.8e-09 Leucine rich repeat
LRR_14 PF23598 284 - 483 1.5e-13 Leucine-rich repeat region
LRR_8 PF13855 302 - 360 2.4e-08 Leucine rich repeat
LRR_8 PF13855 379 - 439 7.3e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 849, 1599, 1620
AcoI YGGCCR 4 cut(s) 460, 604, 748, 892
AcsI RAATTY 2 cut(s) 1461, 1528
AflII CTTAAG 2 cut(s) 361, 937
AjnI CCWGG 1 cut(s) 247
AleI CACNNNNGTG 1 cut(s) 1086
AluBI AGCT 7 cut(s) 122, 1262, 1371, 1431, 1441, 1482, 1664
AluI AGCT 7 cut(s) 122, 1262, 1371, 1431, 1441, 1482, 1664
Alw26I GTCTC 3 cut(s) 149, 179, 1513
AlwI GGATC 3 cut(s) 849, 1599, 1620
AoxI GGCC 7 cut(s) 84, 460, 604, 748, 892, 1391, 1553
ApeKI GCWGC 1 cut(s) 40
ApoI RAATTY 2 cut(s) 1461, 1528
Asp700I GAANNNNTTC 1 cut(s) 1195
AspLEI GCGC 1 cut(s) 247
AspS9I GGNCC 6 cut(s) 84, 487, 631, 1063, 1391, 1553
AsuHPI GGTGA 2 cut(s) 280, 1100
AsuII TTCGAA 1 cut(s) 1414
AvaII GGWCC 3 cut(s) 487, 631, 1063
BanII GRGCYC 1 cut(s) 53
BauI CACGAG 1 cut(s) 146
BbvI GCAGC 1 cut(s) 27
BccI CCATC 2 cut(s) 291, 1579
BciT130I CCWGG 1 cut(s) 249
BcoDI GTCTC 3 cut(s) 149, 179, 1513
BfaI CTAG 2 cut(s) 242, 1656
BfoI RGCGCY 1 cut(s) 248
BfrI CTTAAG 2 cut(s) 361, 937
BisI GCNGC 1 cut(s) 41
BlsI GCNGC 1 cut(s) 42
Bme1390I CCNGG 1 cut(s) 249
Bme18I GGWCC 3 cut(s) 487, 631, 1063
BmgT120I GGNCC 6 cut(s) 84, 487, 631, 1063, 1391, 1553
BmiI GGNNCC 1 cut(s) 85
BmrFI CCNGG 1 cut(s) 249
BmsI GCATC 5 cut(s) 418, 562, 706, 994, 1444
BpmI CTGGAG 1 cut(s) 389
Bpu14I TTCGAA 1 cut(s) 1414
BsaAI YACGTR 1 cut(s) 797
BsaI GGTCTC 1 cut(s) 149
BsaJI CCNNGG 1 cut(s) 55
Bse118I RCCGGY 4 cut(s) 462, 606, 750, 894
Bse1I ACTGG 2 cut(s) 263, 1177
BseBI CCWGG 1 cut(s) 249
BseDI CCNNGG 1 cut(s) 55
BseMII CTCAG 7 cut(s) 386, 530, 674, 818, 962, 1375, 1415
BseNI ACTGG 2 cut(s) 263, 1177
BseXI GCAGC 1 cut(s) 27
BseYI CCCAGC 1 cut(s) 1127
BsgI GTGCAG 1 cut(s) 26
BshFI GGCC 7 cut(s) 86, 462, 606, 750, 894, 1393, 1555
BsiSI CCGG 4 cut(s) 463, 607, 751, 895
BslFI GGGAC 4 cut(s) 453, 597, 741, 1622
BsmAI GTCTC 3 cut(s) 149, 179, 1513
BsmFI GGGAC 4 cut(s) 453, 597, 741, 1622
BsmI GAATGC 1 cut(s) 1185
BsnI GGCC 7 cut(s) 86, 462, 606, 750, 894, 1393, 1555
Bso31I GGTCTC 1 cut(s) 149
Bsp119I TTCGAA 1 cut(s) 1414
Bsp1286I GDGCHC 1 cut(s) 53
Bsp143I GATC 7 cut(s) 229, 268, 841, 1142, 1444, 1591, 1625
BspANI GGCC 7 cut(s) 86, 462, 606, 750, 894, 1393, 1555
BspCNI CTCAG 7 cut(s) 387, 531, 675, 819, 963, 1374, 1416
BspLI GGNNCC 1 cut(s) 85
BspPI GGATC 3 cut(s) 849, 1599, 1620
BspQI GCTCTTC 1 cut(s) 1654
BspT104I TTCGAA 1 cut(s) 1414
BspTI CTTAAG 2 cut(s) 361, 937
BspTNI GGTCTC 1 cut(s) 149
BsrFI RCCGGY 4 cut(s) 462, 606, 750, 894
BsrI ACTGG 2 cut(s) 263, 1177
BssAI RCCGGY 4 cut(s) 462, 606, 750, 894
BssECI CCNNGG 1 cut(s) 55
BssMI GATC 7 cut(s) 229, 268, 841, 1142, 1444, 1591, 1625
BssSI CACGAG 1 cut(s) 146
BssT1I CCWWGG 1 cut(s) 55
Bst2BI CACGAG 1 cut(s) 146
Bst2UI CCWGG 1 cut(s) 249
Bst4CI ACNGT 6 cut(s) 457, 601, 745, 889, 1085, 1581
Bst6I CTCTTC 1 cut(s) 1654
BstAFI CTTAAG 2 cut(s) 361, 937
BstBAI YACGTR 1 cut(s) 797
BstBI TTCGAA 1 cut(s) 1414
BstC8I GCNNGC 1 cut(s) 120
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 1 cut(s) 247
BstKTI GATC 7 cut(s) 232, 271, 844, 1145, 1447, 1594, 1628
BstMAI GTCTC 3 cut(s) 149, 179, 1513
BstMBI GATC 7 cut(s) 229, 268, 841, 1142, 1444, 1591, 1625
BstMWI GCNNNNNNNGC 7 cut(s) 40, 128, 253, 468, 612, 756, 900
BstNI CCWGG 1 cut(s) 249
BstSCI CCNGG 1 cut(s) 247
BstV1I GCAGC 1 cut(s) 27
BstX2I RGATCY 3 cut(s) 841, 1591, 1625
BstYI RGATCY 3 cut(s) 841, 1591, 1625
BsuRI GGCC 7 cut(s) 86, 462, 606, 750, 894, 1393, 1555
BtsIMutI CAGTG 1 cut(s) 1090
Cac8I GCNNGC 1 cut(s) 120
CfoI GCGC 1 cut(s) 247
Cfr10I RCCGGY 4 cut(s) 462, 606, 750, 894
Cfr13I GGNCC 6 cut(s) 84, 487, 631, 1063, 1391, 1553
CviAII CATG 5 cut(s) 46, 171, 215, 838, 982
DpnI GATC 7 cut(s) 231, 270, 843, 1144, 1446, 1593, 1627
DpnII GATC 7 cut(s) 229, 268, 841, 1142, 1444, 1591, 1625
DraI TTTAAA 1 cut(s) 1527
EaeI YGGCCR 4 cut(s) 460, 604, 748, 892
Eam1104I CTCTTC 1 cut(s) 1654
EarI CTCTTC 1 cut(s) 1654
Eco130I CCWWGG 1 cut(s) 55
Eco24I GRGCYC 1 cut(s) 53
Eco31I GGTCTC 1 cut(s) 149
Eco32I GATATC 1 cut(s) 1471
Eco47I GGWCC 3 cut(s) 487, 631, 1063
EcoRII CCWGG 1 cut(s) 247
EcoRV GATATC 1 cut(s) 1471
EcoT14I CCWWGG 1 cut(s) 55
EcoT22I ATGCAT 1 cut(s) 987
EcoT38I GRGCYC 1 cut(s) 53
ErhI CCWWGG 1 cut(s) 55
FaeI CATG 5 cut(s) 49, 174, 218, 841, 985
FalI AAGNNNNNCTT 2 cut(s) 111, 143
FaqI GGGAC 4 cut(s) 453, 597, 741, 1622
FatI CATG 5 cut(s) 45, 170, 214, 837, 981
Fnu4HI GCNGC 1 cut(s) 41
FriOI GRGCYC 1 cut(s) 53
Fsp4HI GCNGC 1 cut(s) 41
FspBI CTAG 2 cut(s) 242, 1656
GlaI GCGC 1 cut(s) 246
GluI GCNGC 1 cut(s) 41
GsaI CCCAGC 1 cut(s) 1131
GsuI CTGGAG 1 cut(s) 389
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 7 cut(s) 86, 462, 606, 750, 894, 1393, 1555
HapII CCGG 4 cut(s) 463, 607, 751, 895
HhaI GCGC 1 cut(s) 247
Hin1II CATG 5 cut(s) 49, 174, 218, 841, 985
Hin6I GCGC 1 cut(s) 245
HinP1I GCGC 1 cut(s) 245
HincII GTYRAC 2 cut(s) 315, 343
HindII GTYRAC 2 cut(s) 315, 343
HindIII AAGCTT 2 cut(s) 1369, 1429
HpaII CCGG 4 cut(s) 463, 607, 751, 895
HphI GGTGA 2 cut(s) 280, 1100
Hpy166II GTNNAC 2 cut(s) 315, 343
Hpy188I TCNGA 9 cut(s) 277, 1099, 1336, 1364, 1425, 1453, 1468, 1576, 1621
Hpy8I GTNNAC 2 cut(s) 315, 343
HpyAV CCTTC 3 cut(s) 103, 863, 1007
HpyCH4III ACNGT 6 cut(s) 457, 601, 745, 889, 1085, 1581
HpyCH4IV ACGT 1 cut(s) 796
HpyF10VI GCNNNNNNNGC 7 cut(s) 40, 128, 253, 468, 612, 756, 900
HpySE526I ACGT 1 cut(s) 796
Hsp92II CATG 5 cut(s) 49, 174, 218, 841, 985
HspAI GCGC 1 cut(s) 245
Kzo9I GATC 7 cut(s) 229, 268, 841, 1142, 1444, 1591, 1625
LguI GCTCTTC 1 cut(s) 1654
Lsp1109I GCAGC 1 cut(s) 27
LweI GCATC 5 cut(s) 418, 562, 706, 994, 1444
MaeI CTAG 2 cut(s) 242, 1656
MaeII ACGT 1 cut(s) 796
MaeIII GTNAC 1 cut(s) 217
MalI GATC 7 cut(s) 231, 270, 843, 1144, 1446, 1593, 1627
MboI GATC 7 cut(s) 229, 268, 841, 1142, 1444, 1591, 1625
MboII GAAGA 4 cut(s) 159, 1188, 1296, 1671
MfeI CAATTG 3 cut(s) 1032, 1544, 1648
MflI RGATCY 3 cut(s) 841, 1591, 1625
MhlI GDGCHC 1 cut(s) 53
MmeI TCCRAC 1 cut(s) 1230
MnlI CCTC 7 cut(s) 17, 267, 430, 574, 718, 1286, 1356
Mph1103I ATGCAT 1 cut(s) 987
MroXI GAANNNNTTC 1 cut(s) 1195
MslI CAYNNNNRTG 1 cut(s) 1086
MspCI CTTAAG 2 cut(s) 361, 937
MspI CCGG 4 cut(s) 463, 607, 751, 895
MspR9I CCNGG 1 cut(s) 249
MunI CAATTG 3 cut(s) 1032, 1544, 1648
Mva1269I GAATGC 1 cut(s) 1185
MvaI CCWGG 1 cut(s) 249
MwoI GCNNNNNNNGC 7 cut(s) 40, 128, 253, 468, 612, 756, 900
NdeII GATC 7 cut(s) 229, 268, 841, 1142, 1444, 1591, 1625
NlaIII CATG 5 cut(s) 49, 174, 218, 841, 985
NlaIV GGNNCC 1 cut(s) 85
NsiI ATGCAT 1 cut(s) 987
NspV TTCGAA 1 cut(s) 1414
OliI CACNNNNGTG 1 cut(s) 1086
PciSI GCTCTTC 1 cut(s) 1654
PctI GAATGC 1 cut(s) 1185
PdmI GAANNNNTTC 1 cut(s) 1195
PkrI GCNGC 1 cut(s) 42
Ppu21I YACGTR 1 cut(s) 797
Psp6I CCWGG 1 cut(s) 247
PspFI CCCAGC 1 cut(s) 1127
PspGI CCWGG 1 cut(s) 247
PspN4I GGNNCC 1 cut(s) 85
PspPI GGNCC 6 cut(s) 84, 487, 631, 1063, 1391, 1553
PsuI RGATCY 3 cut(s) 841, 1591, 1625
RseI CAYNNNNRTG 1 cut(s) 1086
SapI GCTCTTC 1 cut(s) 1654
SatI GCNGC 1 cut(s) 41
Sau3AI GATC 7 cut(s) 229, 268, 841, 1142, 1444, 1591, 1625
Sau96I GGNCC 6 cut(s) 84, 487, 631, 1063, 1391, 1553
ScrFI CCNGG 1 cut(s) 249
SduI GDGCHC 1 cut(s) 53
SfaNI GCATC 5 cut(s) 418, 562, 706, 994, 1444
SfuI TTCGAA 1 cut(s) 1414
SinI GGWCC 3 cut(s) 487, 631, 1063
SmiMI CAYNNNNRTG 1 cut(s) 1086
SmlI CTYRAG 2 cut(s) 361, 937
SmoI CTYRAG 2 cut(s) 361, 937
SspI AATATT 1 cut(s) 300
SspMI CTAG 2 cut(s) 242, 1656
StyD4I CCNGG 1 cut(s) 247
StyI CCWWGG 1 cut(s) 55
TaaI ACNGT 6 cut(s) 457, 601, 745, 889, 1085, 1581
TaiI ACGT 1 cut(s) 799
TaqI TCGA 1 cut(s) 1414
TscAI CASTG 1 cut(s) 1090
TseI GCWGC 1 cut(s) 40
TspDTI ATGAA 5 cut(s) 159, 366, 1188, 1247, 1517
TspGWI ACGGA 2 cut(s) 328, 1271
TspRI CASTG 1 cut(s) 1090
Vha464I CTTAAG 2 cut(s) 361, 937
VpaK11BI GGWCC 3 cut(s) 487, 631, 1063
XapI RAATTY 2 cut(s) 1461, 1528
XbaI TCTAGA 1 cut(s) 1655
XmnI GAANNNNTTC 1 cut(s) 1195
XspI CTAG 2 cut(s) 242, 1656
Zsp2I ATGCAT 1 cut(s) 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.