Rroxscaffold_4G00300810

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
21177095 .. 21179519
2425 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00300810.1

Sequence Viewer

Length: 1941 bp
ATGATACGGAAAGTTTTGGGAAACTCTCGGTTTGTATGTCTTGGATCTCTCTGGAAATCTTCTAAGCGGAAGAATTCCGGAAGGTATTGGGCAACTCTCATCACTGGGATATTTATTTCTTTCTGGAAATCAATTAAGCAAAAGCATACTGAAACTATTGGCCAACTGTCATCGTTGTGGAGTTTAGATCTCTCTAGAAATTTGTTAAGCGGAAGAATACCGCAAAGTATTGGACAGATGTCTAGGTTGCGCTTTATAAATCTTAGTATGAATCGTTTGGAAGGGGAGATTTCGGAAACTCATTTCTCAAAACTCTTCAATTTATATGAGTTGGATTTATCCTATAACTCATTATTAGAATTCAATGTCACTTCTGATTGGATTCCTCCTTTCCACTTTTTGGATTATCTAAGTTTGAGGTCTTGTATGGTAGGGCCGGATTTCCCAAAATGGCTTCGAACCCAAAAATATCTTTCCTACATTGACATGTCTGATGGTGACATTTCAGATGTCCTTCCAAGTTGGTTCTGGGGTCTATTTCGTGACGTTTCGACTATAGATCTGTCTAACAATCAAATTAGAGGAACATTAGGGAGTTCAAAGGCTGTATCATTCAGCGGAGTTGAAGTTCGATTTAGTTCGAACCAGTTGGAAGGTCCAATACCCTCATTTCTATCAAAAGCGTCATATTTGGATCTCTCAGATAATAAATTTTCAGAGATGACTTCCTTCTTGTGTTCTGCGAATGTTAAAATTTCTAAATTTCTTGATCTCTCCACAAACCATATTCCTGGAGAAGTTCCAGATTGCTGGAGACATTGGGTCAATCTAGAACTTCTCGATTTGAGTAACAATTCTCTTTCTGGTAAAATCCCACCCAATATAGGATGTTTACTTCGAATCAAAACATTGAAATTAAGGAGCAACAGACTCGTGGGAGAATTGCCTTCATCCTTGAAGAATTGTACAAGCTTAAATGTTATTGATCTTGGGAACAATACGCTCTCAAGTTCAGTCCCTGAATGGTTAGGGGTCAGTCTTCCAAATTTGGTTATTCTTATGCTTCAATCTAATCAGCTTAGTGGAAGTTTGCCTTCACAATTATGCCATCTAGCACGCCTTCAAATTTTGGATGTCTCTGTGAATCAAATCTCTGGAACTATACCAAAATGCCTCGATAGTTTGACTTCTTTGACGCAAGAAGGAAATTCAAATCTAACCATCAGACATTCTTTTAATATATCTGGGGCCGAACCACCTATGAGTTCTCTTTATTATGAGGATGATGCAACCTTCATGTGGAAAGGAACGTTGTCTTCATACAAAAGTACTTTGGGACTGGTCAAGAGAATTGATCTCTCAAGCAACAGATTAACCGGGGAGATTCCAAGTGAAATCACTCATCTTGTTGGGTTGGTTTCTCTGAACCTTTCGAGGAACAATTTAACTGGACAAATACCTCTACAGATCGGAAAGTTGAAGTCACTAGATTCCCTTGATTTGTCTAGAAACAAGATAGGTGGTAGGATTCCGATAAGCCTTGCTCAAATCTATGGACTTGGTGTCATGGATTTGTCATATAACAACTTGTCTGGTGAAATTCCAACTGGTACTCAGCTCCAGAGCTTTGATCGGTCCTCTTATGCCGGAAATACTCAATTGTGTGGACGTCCACTTGAAGCTTGTAATCCAGAGGGAACTGGTCGGCCAAATGTCTCGAGTGATCAAGCAGATCCAGATGAGCTCATCACACCGGGCTTTTACATAAGTCTGGGACTTGGATTTGCTGTTGGATTCTGGGTTGTCTGTGGGAGCTTGATATTCAAGCGGTCATGGAGATATGCATACTACAACTTCTTGAATGCTTTAAATGATTGGCTTTATGTGAGGGTAGCTTTGATCAGACGGCAATTAAAGGATATGCTTAGTGGACAATCTTAA

Protein Analysis

646

Amino Acids

72.05

Weight (kDa)

8.8

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 301 - 360 2.6e-06 Leucine rich repeat
LRR_8 PF13855 448 - 506 4.5e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 257
AatII GACGTC 1 cut(s) 1672
AccB7I CCANNNNNTGG 1 cut(s) 400
AccIII TCCGGA 1 cut(s) 77
AciI CCGC 5 cut(s) 67, 210, 221, 618, 1828
AclI AACGTT 1 cut(s) 1310
AclWI GGATC 3 cut(s) 52, 702, 1727
AcoI YGGCCR 2 cut(s) 160, 1706
AcyI GRCGYC 1 cut(s) 1669
AfaI GTAC 3 cut(s) 967, 1330, 1612
AfiI CCNNNNNNNGG 3 cut(s) 400, 884, 1299
AflIII ACRYGT 1 cut(s) 486
AhdI GACNNNNNGTC 2 cut(s) 821, 1562
AjnI CCWGG 1 cut(s) 790
AloI GAACNNNNNNTCC 2 cut(s) 612, 644
AluBI AGCT 8 cut(s) 972, 1078, 1618, 1626, 1682, 1744, 1815, 1895
AluI AGCT 8 cut(s) 972, 1078, 1618, 1626, 1682, 1744, 1815, 1895
Alw21I GWGCWC 1 cut(s) 1746
Alw26I GTCTC 3 cut(s) 808, 1141, 1720
AlwI GGATC 3 cut(s) 52, 702, 1727
AlwNI CAGNNNCTG 1 cut(s) 1019
Ama87I CYCGRG 1 cut(s) 1717
Aor13HI TCCGGA 1 cut(s) 77
AoxI GGCC 4 cut(s) 160, 434, 1248, 1706
AspLEI GCGC 1 cut(s) 252
AspS9I GGNCC 4 cut(s) 434, 656, 1248, 1635
AsuC2I CCSGG 2 cut(s) 1378, 1755
AsuHPI GGTGA 2 cut(s) 509, 1607
AsuII TTCGAA 3 cut(s) 457, 641, 898
AvaI CYCGRG 1 cut(s) 1717
AvaII GGWCC 2 cut(s) 656, 1635
BalI TGGCCA 1 cut(s) 162
BanII GRGCYC 1 cut(s) 1746
BarI GAAGNNNNNNTAC 2 cut(s) 645, 677
BauI CACGAG 1 cut(s) 932
BbsI GAAGAC 2 cut(s) 1031, 1308
Bbv12I GWGCWC 1 cut(s) 1746
BccI CCATC 3 cut(s) 488, 1116, 1229
BceAI ACGGC 1 cut(s) 1922
BcgI CGANNNNNNTGC 2 cut(s) 913, 947
BciT130I CCWGG 1 cut(s) 792
BclI TGATCA 2 cut(s) 1723, 1899
BcnI CCSGG 2 cut(s) 1378, 1755
BcoDI GTCTC 3 cut(s) 808, 1141, 1720
BfaI CTAG 6 cut(s) 195, 243, 830, 1112, 1487, 1506
BfmI CTRYAG 2 cut(s) 555, 1463
BglII AGATCT 2 cut(s) 187, 559
BmcAI AGTACT 1 cut(s) 1330
Bme1390I CCNGG 3 cut(s) 792, 1378, 1755
Bme18I GGWCC 2 cut(s) 656, 1635
BmeRI GACNNNNNGTC 2 cut(s) 821, 1562
BmeT110I CYCGRG 1 cut(s) 1717
BmgT120I GGNCC 4 cut(s) 434, 656, 1248, 1635
BmiI GGNNCC 1 cut(s) 1249
BmrFI CCNGG 3 cut(s) 792, 1378, 1755
BmrI ACTGGG 1 cut(s) 114
BmsI GCATC 1 cut(s) 1276
BmuI ACTGGG 1 cut(s) 114
BoxI GACNNNNGTC 1 cut(s) 238
BpiI GAAGAC 2 cut(s) 1031, 1308
BpmI CTGGAG 3 cut(s) 813, 832, 1604
Bpu14I TTCGAA 3 cut(s) 457, 641, 898
BpuEI CTTGAG 2 cut(s) 991, 1345
BpuMI CCSGG 2 cut(s) 1378, 1755
BsaHI GRCGYC 1 cut(s) 1669
BsaJI CCNNGG 1 cut(s) 1377
BsaWI WCCGGW 1 cut(s) 77
BsaXI ACNNNNNCTCC 2 cut(s) 612, 642
Bsc4I CCNNNNNNNGG 3 cut(s) 400, 884, 1299
Bse1I ACTGG 6 cut(s) 109, 646, 1344, 1453, 1612, 1705
BseAI TCCGGA 1 cut(s) 77
BseBI CCWGG 1 cut(s) 792
BseDI CCNNGG 1 cut(s) 1377
BseGI GGATG 4 cut(s) 893, 950, 1138, 1288
BseLI CCNNNNNNNGG 3 cut(s) 400, 884, 1299
BseMII CTCAG 2 cut(s) 714, 1628
BseNI ACTGG 6 cut(s) 109, 646, 1344, 1453, 1612, 1705
BshFI GGCC 4 cut(s) 162, 436, 1250, 1708
BsiHKAI GWGCWC 1 cut(s) 1746
BsiHKCI CYCGRG 1 cut(s) 1717
BsiSI CCGG 5 cut(s) 78, 437, 1377, 1647, 1754
BslFI GGGAC 3 cut(s) 1001, 1350, 1788
BslI CCNNNNNNNGG 3 cut(s) 400, 884, 1299
BsmAI GTCTC 3 cut(s) 808, 1141, 1720
BsmFI GGGAC 3 cut(s) 1001, 1350, 1788
BsmI GAATGC 1 cut(s) 1867
BsnI GGCC 4 cut(s) 162, 436, 1250, 1708
BsoBI CYCGRG 1 cut(s) 1717
Bsp119I TTCGAA 3 cut(s) 457, 641, 898
Bsp1286I GDGCHC 1 cut(s) 1746
Bsp13I TCCGGA 1 cut(s) 77
Bsp1407I TGTACA 1 cut(s) 965
BspACI CCGC 5 cut(s) 67, 210, 221, 618, 1828
BspANI GGCC 4 cut(s) 162, 436, 1250, 1708
BspCNI CTCAG 2 cut(s) 713, 1627
BspEI TCCGGA 1 cut(s) 77
BspLI GGNNCC 1 cut(s) 1249
BspPI GGATC 3 cut(s) 52, 702, 1727
BspT104I TTCGAA 3 cut(s) 457, 641, 898
BsrGI TGTACA 1 cut(s) 965
BsrI ACTGG 6 cut(s) 109, 646, 1344, 1453, 1612, 1705
BssECI CCNNGG 1 cut(s) 1377
BssNI GRCGYC 1 cut(s) 1669
BssSI CACGAG 1 cut(s) 932
Bst2BI CACGAG 1 cut(s) 932
Bst2UI CCWGG 1 cut(s) 792
Bst4CI ACNGT 1 cut(s) 168
Bst6I CTCTTC 1 cut(s) 320
BstACI GRCGYC 1 cut(s) 1669
BstAUI TGTACA 1 cut(s) 965
BstBI TTCGAA 3 cut(s) 457, 641, 898
BstC8I GCNNGC 1 cut(s) 1117
BstDEI CTNAG 7 cut(s) 63, 263, 410, 700, 1079, 1614, 1925
BstF5I GGATG 4 cut(s) 893, 950, 1138, 1288
BstHHI GCGC 1 cut(s) 252
BstMAI GTCTC 3 cut(s) 808, 1141, 1720
BstNI CCWGG 1 cut(s) 792
BstNSI RCATGY 1 cut(s) 490
BstPAI GACNNNNGTC 1 cut(s) 238
BstSCI CCNGG 3 cut(s) 790, 1376, 1753
BstSFI CTRYAG 2 cut(s) 555, 1463
BstV2I GAAGAC 2 cut(s) 1031, 1308
BstX2I RGATCY 5 cut(s) 44, 187, 559, 694, 1732
BstXI CCANNNNNNTGG 2 cut(s) 791, 810
BstYI RGATCY 5 cut(s) 44, 187, 559, 694, 1732
BsuRI GGCC 4 cut(s) 162, 436, 1250, 1708
BtsCI GGATG 4 cut(s) 893, 950, 1138, 1288
BtsIMutI CAGTG 1 cut(s) 102
Cac8I GCNNGC 1 cut(s) 1117
CaiI CAGNNNCTG 1 cut(s) 1019
CfoI GCGC 1 cut(s) 252
Cfr13I GGNCC 4 cut(s) 434, 656, 1248, 1635
CseI GACGC 2 cut(s) 672, 1204
Csp6I GTAC 3 cut(s) 966, 1329, 1611
CspCI CAANNNNNGTGG 2 cut(s) 1501, 1536
CviAII CATG 4 cut(s) 487, 1297, 1567, 1833
CviQI GTAC 3 cut(s) 966, 1329, 1611
DdeI CTNAG 7 cut(s) 63, 263, 410, 700, 1079, 1614, 1925
DraI TTTAAA 1 cut(s) 1869
DriI GACNNNNNGTC 2 cut(s) 821, 1562
EaeI YGGCCR 2 cut(s) 160, 1706
Eam1104I CTCTTC 1 cut(s) 320
Eam1105I GACNNNNNGTC 2 cut(s) 821, 1562
EarI CTCTTC 1 cut(s) 320
Ecl136II GAGCTC 1 cut(s) 1744
Eco24I GRGCYC 1 cut(s) 1746
Eco47I GGWCC 2 cut(s) 656, 1635
Eco53kI GAGCTC 1 cut(s) 1744
Eco88I CYCGRG 1 cut(s) 1717
EcoICRI GAGCTC 1 cut(s) 1744
EcoRI GAATTC 2 cut(s) 73, 359
EcoRII CCWGG 1 cut(s) 790
EcoT22I ATGCAT 1 cut(s) 1846
EcoT38I GRGCYC 1 cut(s) 1746
FaeI CATG 4 cut(s) 490, 1300, 1570, 1836
FalI AAGNNNNNCTT 2 cut(s) 1078, 1110
FaqI GGGAC 3 cut(s) 1001, 1350, 1788
FatI CATG 4 cut(s) 486, 1296, 1566, 1832
FbaI TGATCA 2 cut(s) 1723, 1899
FokI GGATG 4 cut(s) 900, 937, 1145, 1295
FriOI GRGCYC 1 cut(s) 1746
FspBI CTAG 6 cut(s) 195, 243, 830, 1112, 1487, 1506
GlaI GCGC 1 cut(s) 251
GsuI CTGGAG 3 cut(s) 813, 832, 1604
HaeIII GGCC 4 cut(s) 162, 436, 1250, 1708
HapII CCGG 5 cut(s) 78, 437, 1377, 1647, 1754
HgaI GACGC 2 cut(s) 672, 1204
HhaI GCGC 1 cut(s) 252
Hin1I GRCGYC 1 cut(s) 1669
Hin1II CATG 4 cut(s) 490, 1300, 1570, 1836
Hin6I GCGC 1 cut(s) 250
HinP1I GCGC 1 cut(s) 250
HindIII AAGCTT 2 cut(s) 970, 1680
HinfI GANTC 9 cut(s) 271, 382, 900, 930, 1144, 1384, 1490, 1528, 1794
HpaII CCGG 5 cut(s) 78, 437, 1377, 1647, 1754
HphI GGTGA 2 cut(s) 509, 1607
Hpy166II GTNNAC 4 cut(s) 893, 1667, 1673, 1931
Hpy8I GTNNAC 4 cut(s) 893, 1667, 1673, 1931
HpyCH4III ACNGT 1 cut(s) 168
HpyCH4IV ACGT 3 cut(s) 546, 1310, 1669
HpyCH4V TGCA 2 cut(s) 1289, 1844
HpyF3I CTNAG 7 cut(s) 63, 263, 410, 700, 1079, 1614, 1925
HpySE526I ACGT 3 cut(s) 546, 1310, 1669
Hsp92I GRCGYC 1 cut(s) 1669
Hsp92II CATG 4 cut(s) 490, 1300, 1570, 1836
HspAI GCGC 1 cut(s) 250
Kpn2I TCCGGA 1 cut(s) 77
Ksp22I TGATCA 2 cut(s) 1723, 1899
LmnI GCTCC 3 cut(s) 921, 1623, 1812
LweI GCATC 1 cut(s) 1276
MaeI CTAG 6 cut(s) 195, 243, 830, 1112, 1487, 1506
MaeII ACGT 3 cut(s) 546, 1310, 1669
MaeIII GTNAC 5 cut(s) 367, 497, 542, 848, 1482
MboII GAAGA 7 cut(s) 51, 82, 225, 307, 970, 1031, 1308
MfeI CAATTG 1 cut(s) 1658
MflI RGATCY 5 cut(s) 44, 187, 559, 694, 1732
MhlI GDGCHC 1 cut(s) 1746
MlsI TGGCCA 1 cut(s) 162
MluNI TGGCCA 1 cut(s) 162
MlyI GAGTC 1 cut(s) 924
MmeI TCCRAC 4 cut(s) 312, 630, 1628, 1771
Mox20I TGGCCA 1 cut(s) 162
Mph1103I ATGCAT 1 cut(s) 1846
MroI TCCGGA 1 cut(s) 77
MscI TGGCCA 1 cut(s) 162
MslI CAYNNNNRTG 3 cut(s) 175, 485, 1102
Msp20I TGGCCA 1 cut(s) 162
MspA1I CMGCKG 1 cut(s) 618
MspI CCGG 5 cut(s) 78, 437, 1377, 1647, 1754
MspR9I CCNGG 3 cut(s) 792, 1378, 1755
MunI CAATTG 1 cut(s) 1658
Mva1269I GAATGC 1 cut(s) 1867
MvaI CCWGG 1 cut(s) 792
NciI CCSGG 2 cut(s) 1378, 1755
NlaIII CATG 4 cut(s) 490, 1300, 1570, 1836
NlaIV GGNNCC 1 cut(s) 1249
NmuCI GTSAC 4 cut(s) 367, 497, 542, 1482
NsiI ATGCAT 1 cut(s) 1846
NspI RCATGY 1 cut(s) 490
NspV TTCGAA 3 cut(s) 457, 641, 898
PaeR7I CTCGAG 1 cut(s) 1717
PciI ACATGT 1 cut(s) 486
PctI GAATGC 1 cut(s) 1867
PfeI GAWTC 8 cut(s) 271, 382, 900, 1144, 1384, 1490, 1528, 1794
PflMI CCANNNNNTGG 1 cut(s) 400
PfoI TCCNGGA 1 cut(s) 790
PleI GAGTC 1 cut(s) 924
PpsI GAGTC 1 cut(s) 924
PscI ACATGT 1 cut(s) 486
PshAI GACNNNNGTC 1 cut(s) 238
PsiI TTATAA 1 cut(s) 257
Psp124BI GAGCTC 1 cut(s) 1746
Psp1406I AACGTT 1 cut(s) 1310
Psp6I CCWGG 1 cut(s) 790
PspGI CCWGG 1 cut(s) 790
PspN4I GGNNCC 1 cut(s) 1249
PspPI GGNCC 4 cut(s) 434, 656, 1248, 1635
PstNI CAGNNNCTG 1 cut(s) 1019
PsuI RGATCY 5 cut(s) 44, 187, 559, 694, 1732
RsaI GTAC 3 cut(s) 967, 1330, 1612
RsaNI GTAC 3 cut(s) 966, 1329, 1611
RseI CAYNNNNRTG 3 cut(s) 175, 485, 1102
SacI GAGCTC 1 cut(s) 1746
Sau96I GGNCC 4 cut(s) 434, 656, 1248, 1635
ScaI AGTACT 1 cut(s) 1330
SchI GAGTC 1 cut(s) 924
ScrFI CCNGG 3 cut(s) 792, 1378, 1755
SduI GDGCHC 1 cut(s) 1746
SfaNI GCATC 1 cut(s) 1276
SfcI CTRYAG 2 cut(s) 555, 1463
Sfr274I CTCGAG 1 cut(s) 1717
SfuI TTCGAA 3 cut(s) 457, 641, 898
SinI GGWCC 2 cut(s) 656, 1635
SlaI CTCGAG 1 cut(s) 1717
SmiMI CAYNNNNRTG 3 cut(s) 175, 485, 1102
SmlI CTYRAG 3 cut(s) 1006, 1360, 1717
SmoI CTYRAG 3 cut(s) 1006, 1360, 1717
SsiI CCGC 5 cut(s) 67, 210, 221, 618, 1828
SspMI CTAG 6 cut(s) 195, 243, 830, 1112, 1487, 1506
SstI GAGCTC 1 cut(s) 1746
StyD4I CCNGG 3 cut(s) 790, 1376, 1753
TaaI ACNGT 1 cut(s) 168
TaiI ACGT 3 cut(s) 549, 1313, 1672
TaqI TCGA 9 cut(s) 457, 551, 631, 641, 840, 898, 1176, 1433, 1718
TaqII GACCGA 1 cut(s) 1623
TatI WGTACW 2 cut(s) 965, 1328
TfiI GAWTC 8 cut(s) 271, 382, 900, 1144, 1384, 1490, 1528, 1794
TscAI CASTG 1 cut(s) 109
TseFI GTSAC 4 cut(s) 367, 497, 542, 1482
Tsp45I GTSAC 4 cut(s) 367, 497, 542, 1482
TspDTI ATGAA 4 cut(s) 284, 939, 1285, 1308
TspGWI ACGGA 1 cut(s) 22
TspRI CASTG 1 cut(s) 109
Van91I CCANNNNNTGG 1 cut(s) 400
VpaK11BI GGWCC 2 cut(s) 656, 1635
XbaI TCTAGA 3 cut(s) 194, 829, 1505
XceI RCATGY 1 cut(s) 490
XcmI CCANNNNNNNNNTGG 1 cut(s) 525
XhoI CTCGAG 1 cut(s) 1717
XspI CTAG 6 cut(s) 195, 243, 830, 1112, 1487, 1506
ZraI GACGTC 1 cut(s) 1670
ZrmI AGTACT 1 cut(s) 1330
Zsp2I ATGCAT 1 cut(s) 1846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.