Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000028

Physical Location & Seq

Genomic Coordinates Reverse (-)

47641242 .. 47647793

Gene Structure 6552 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58036

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6552 bp

ATGGAGTTGGGAATGTGGCTCAGACATGCTTATGCAATATCAATTGTGCTTCTTCTGCATATCAACGCTTCCTTATCCCTCGGCCACCACCGTGCTAACGTGACGGCAAGGTGCCTAGAGAGGGAGAGGGATGCATTGCTTGCTATCAAAGGAGACCTGGTGGATGAATACAACCTGCTCTCTTCGTGGGGAAGCGAAGCCAAAAAGCGAGACTGTTGCGGATGGGAAAGAGTCCACTGCGATCACCAGACCGGCCATGTTATTCAACTTCATCTGAATGAAGGACCGTGGGTGATCTCTTTGCAAGGTGAGTACCTTGAGTATATACAGACTGTGCAAAGTGAAATTAGTCCTAAAATCATTGAGTTGCAGCATTTGGAATATTTGGACCTCAGTAACAATTCCTTCACTGCCAGCCAAATTCCAGCACTCATTTGTTCTCTATCCAATTTAGGACACCTAGATCTCAGTTTCAATGACCTCTCTGGGAGCAAAATTCCGGAGCTCATTGGTAACTTGACCAATTTAAGGTATCTAGATCTGTCTGACACTCGCTTGAGTGGTGAAATTCCATATCATAAGCTTGGAAACCTTACTCATTTGCAGTATCTCAATCTCGGGTGGAATGACTTCACTCCTGTTGGAGGAAATCTCAATTGGCTTCCACATCTTTCTTCTTTAAAATACCTGGACTTGAGTTTCACCGATCTAAGTAAGGTTTCTGATTGGCTGGAAACAATAAACAAGCTCCCTGACCTAAGAAACTTGACCTTAATAGGATGTGATCTTCATCCTCCAATTCTTTCCACTCTTTCTCACATAAATTCTTCCAATTCTCTTGTAAGTGTTGAATTGTCTAAAAATCCTGCTGTCAGTTCTTCAATATTCAAATGGTTGTGCAACTACAATACCACCCTAGTTCATATTGACCTCTCTTCCACCCAATTAAGTGGTTTGATTCCCGATGCTTTCAAAAATATGAATTCACTTGCATATCTTGGCCTCCGTGATATCCAATTAAGTGATTTTACTGCTAATGCTTTTGCAAACATGAGCTCACTTGAAACTCTTGTCCTCTCTTACAACCAATTAAGGGGTTTGATTCCTTATGCTTTTGCAAACATGAGATCACTTGAAAATCTGTACCTCTCTAGCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTAATTCCCGATGCTTTTGCAAACATGAGCTCACTTGCATCTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCATTTGCAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAATCAATTAAGTGGTTTGATTCCTTATGCATTTGCAAACATGAGTTCACTTAAATATCTTTACCTCTATTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAGCTCTTGTCCTCTCTTACAACCAATTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAGCTCTTGTCCTCTCTTCCAACCAATTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAACTCTTGTCCTCTCTTACAACCATTTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTCACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAACTCTTGTCCTCTCTTACAACCAATTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGATTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTAAATATCTTCACCTCTCTTCCAACCAATTAAGGGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGAAACTCTTGTCCTCTCTTACAACCAATTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGATCACTTGAAAATCTGTACCTCTCTAGCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTAATTCCCGATGCTTTTGCAAACATGAGCTCACTTGCATCTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAATCAATTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGTTCACTTAAATATCTTTACCTCTATTCCAACCAATTAAGTGGTTTGATTCCGAATGCTTTCGCAAACATGAGGTCACTTAAATATCTTTACCTCTATTCCAACCAATTAAGTGGTTTGATTCCGAATGCTTTCGCAAACATGAGCTCACTTAAATATCTGTACCTCTTTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAACTCTTGTCCTCTCTTACAACCAATTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTCACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAACTCTTGTCCTCTCTTACAACCAATTAAGTGGTTTGATTCCTTATGCTTTTGTAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCTGATGCTTTTGCAAACATGAGATCACTTGAAACTCTTGACCTCTCTTACAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGAAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAGCTCTTGTCCTCTCTTCCAACCAATTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAACTCTTGTCCTCTCTTACAACCATTTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAACTCTTGTCCTCTCTTACAACCATTTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAACTCTTGTCCTCTCTTCCAACCAATTAGGTGATTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAACTCTTGTCCTCTCTTACAACCATTTAAGTGGTTTGATTCCTTATGCTTTTGGAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGATCACTTGAAACTCTTGTCCTCTCTTCCAACCAATTAGGTGATTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGCAAATCTTGACCTTTGTAATAACCCACTTGAAGGAGGAATCCCTGCAGCATCCATTGGCCAGTTATGTAATTTGCGGACCTTGGCCATTTCAGACAGTAGGTTACATGGACAGTTCTCTGAATTTGTTCAAACATTGTCTATATGTACTCAAAACTCATTGGAGAGATTGAGTCTCTCTCATAATGATCTTGCTAGGTCATTGCCTAATCTTGCAAACTTCCAATCATTGAAGGAATTATATCTCTCTAAAAACCAGTTGAGTGGAATCATTCCTGATAGTATTGGAAAGTTGTCTTCTTTGATGACATTAGATCTCAAAGAAAATAGGTTAAGCGGAATGATACCGGAGAGTATTGGGCAAATGTCATTGTTGAGAGAGTTGTGTCTACAGGGAAACCAACTTAGCGGAATGATACCGGAAAGTATTGGGAAATTGTCAGCCTTGCAAACATTAGATCTCTCCGGTAATCGATTAAGTGGGAAAGTACCTGAAAGTATTGGACAATGCTCAAAACTGTCCAATATGAATCTTAGTAAGAATTCTTTGGAAGGGGTAATTTCGGAAGTTCATTTTTCAAAATTGTCTGCACTAGAGGCATTGGATTTATCGTATAACCCATTAGCTTTCAACATCAATTCTGATTGGGTTCCTCCTTTTCAATTGTATTCTTTAAGTTTGAAATCATGCAAGGTCGGGCGGTATTTCCCAAACTGGCTTCGAACTCAAAAAAGTCTTTCCAAAATTGATATTTCTTATGCTGGAATTTCAGATGTCCTTCCAAGTTGGTTCTTGAGTCTCTTTGGTAACACCCAGACAATAGATATCTCTCATAATCAAATTAGAGGAACATTTGAGAGTTCAACATTGAATGTTACATCATTGCCTGGAGTTGAAGTTCATTTCGGTTCCAATCAATTCGAAGGTTCAATACCGTCAATTTTATTTGCTGCTTCATATTTGGATCTCTCCGATAATAAGTTTTCAGATATGACAGCCTTGTGTGTTACTTCAGAGCTTCAAAGTTTGAAGTTTCTTGATCTCTCAGGCAATCATGTTTCAGGAGAAATTCCAGATTGTTGGAGGCATTTGGTCTCCCTAGAACTACTCGATTTGAGTAGCAATGCTTTTTCCGGGAAAATCCCGACCACTATAGGCACTTTGTTTCGAATGGAAACATTGAAATTAAGAAGCAACAAACTTGTAGGAGAATTGCCTTCATCCTTGAAGAATTGTAAGAGCTTAAAAGTGATTGATCTCGGAGACAATAAGCTTTCAGGATCAGTCCCTGAATGGTTGGGAGTTAGTTTTCCAAATTTGGTGATACTGATGCTCCAATCTAATCAGTTTAGAGGGAGCTTGCTGCCTTCACAATTATGTCATTTAACGCACATTCAGATTTTGGATTTCTCTGTGAATGAAATCTCAGGAGCTATACCTAAATGCCTCAATAATATGACTTCTTTAACTCGAGAAGGAAATTCAAGTCTAACCATTAGACATTCTTTTCATCCATCTTATGCACAAGCACCTGGGATGGCGGCACCCCCATCGCCTACGGCGGAAGCACCTTACGTAAGTGTGTCTGATTATTATGAGGATGATGCAACCTTCATGTGGAAAGGAAGAATGCATGCATACAAAAGTACTTTGGGACTTGTCAAGAGAATTGATCTCTCAAGCAACAAAATAACTGGGGAAATTCCAAGTGAGATCACTCATCTTGTTGGTTTGGTTTCTTTGAACCTTTCAAGAAACCATCTAACAGGACATATTCCTTCACAGATTGGAAAGCTGAAGTTCTTAGATTCTCTTGATTTGTCAAGAAACCGGATAAATGGGAAGATTCCGACAAGTCTTGCTCGGATCGATCAACTTGCTTACTTGGACCTGTCATACAACAACTTATCTGGCGAAATTCCAACTGGTACTCAACTCCAAGACCCTTCCTCTTTTGCTGGAAATCTTAAATTGTGTGGATTTCCACTTGAAAAGATTTGTGATCCGGAAGGAAACGGTCGGCCAAATGTCTCGAGCAATGAAGAAGATCCAGATGAGCTCATCACGCTGGGTTTCTACATAAGTCTAGGAGTTGGATTTGCTGTTGGATTTTGGGGAGTCTCCGGGAGTTTGATATTCAAGAGGTCATGGAGATATGCATACTACAACTTCTTGAATGCTTCAAATGATTGGCTTTATGTGAAGGTTGCTTTGATCAGACGGCAATTAAGTGATGTGCTTCATACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

2183

Amino Acids

237.19

Weight (kDa)

4.93

Isoelectric Point (pI)

34.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	40 - 81	1.7e-07	Leucine rich repeat N-terminal domain
LRR_14	PF23598	105 - 262	1.1e-12	Leucine-rich repeat region
LRR_5	PF13306	302 - 425	4.3e-08	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	334 - 388	5.2e-11	Leucine rich repeat
LRR_8	PF13855	376 - 436	1.9e-15	Leucine rich repeat
LRR_5	PF13306	418 - 546	6e-10	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	425 - 484	2.4e-15	Leucine rich repeat
LRR_8	PF13855	449 - 508	1.2e-14	Leucine rich repeat
LRR_8	PF13855	473 - 532	8.7e-15	Leucine rich repeat
LRR_8	PF13855	497 - 556	8.8e-15	Leucine rich repeat
LRR_8	PF13855	521 - 580	1.3e-14	Leucine rich repeat
LRR_5	PF13306	538 - 666	9.9e-11	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	544 - 604	1.1e-14	Leucine rich repeat
LRR_8	PF13855	592 - 652	5.6e-15	Leucine rich repeat
LRR_5	PF13306	634 - 762	6.6e-11	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	640 - 700	7.2e-15	Leucine rich repeat
LRR_8	PF13855	688 - 748	1.6e-15	Leucine rich repeat
LRR_8	PF13855	738 - 796	3.4e-15	Leucine rich repeat
LRR_5	PF13306	754 - 866	4e-09	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	784 - 844	1.9e-15	Leucine rich repeat
LRR_5	PF13306	826 - 955	8.3e-11	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	833 - 892	2.4e-15	Leucine rich repeat
LRR_8	PF13855	857 - 916	1.1e-14	Leucine rich repeat
LRR_5	PF13306	874 - 1000	4.8e-09	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	881 - 940	8.8e-15	Leucine rich repeat
LRR_8	PF13855	905 - 964	5.1e-14	Leucine rich repeat
LRR_8	PF13855	937 - 988	1.2e-10	Leucine rich repeat
LRR_5	PF13306	946 - 1073	2.5e-09	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	953 - 1012	2.5e-14	Leucine rich repeat
LRR_5	PF13306	994 - 1122	3.5e-10	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	1000 - 1060	1e-14	Leucine rich repeat
LRR_5	PF13306	1042 - 1154	1.9e-08	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	1048 - 1108	6.1e-16	Leucine rich repeat
LRR_8	PF13855	1096 - 1156	2e-16	Leucine rich repeat
LRR_4	PF12799	1097 - 1135	2e-06	Leucine Rich repeats (2 copies)
LRR_5	PF13306	1138 - 1248	4.1e-09	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	1144 - 1204	5.8e-15	Leucine rich repeat
LRR_8	PF13855	1192 - 1252	1.7e-15	Leucine rich repeat
LRR_5	PF13306	1234 - 1344	1.1e-09	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	1240 - 1300	2.5e-15	Leucine rich repeat
LRR_8	PF13855	1288 - 1348	3.5e-15	Leucine rich repeat
LRR_5	PF13306	1330 - 1442	2.1e-09	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	1336 - 1396	3.5e-15	Leucine rich repeat
LRR_14	PF23598	1357 - 1517	1.6e-07	Leucine-rich repeat region
LRR_8	PF13855	1384 - 1444	3.5e-13	Leucine rich repeat
LRR_14	PF23598	1500 - 1686	1.4e-15	Leucine-rich repeat region
LRR_8	PF13855	1510 - 1569	1.6e-11	Leucine rich repeat
LRR_8	PF13855	1582 - 1642	1.5e-09	Leucine rich repeat
LRR_8	PF13855	1754 - 1810	1.4e-06	Leucine rich repeat
LRR_14	PF23598	1755 - 1855	7.1e-07	Leucine-rich repeat region
LRR_14	PF23598	2004 - 2067	1.7e-06	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000028)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica	MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica	Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis	pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis	RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata	RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora	Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii	Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa	Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha	Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana	Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	183
AccB1I	GGYRCC	2 cut(s)	111, 5845
AccI	GTMKAC	1 cut(s)	4690
AccIII	TCCGGA	2 cut(s)	499, 6307
AciI	CCGC	7 cut(s)	219, 4378, 4638, 4710, 5002, 5843, 5864
AclWI	GGATC	5 cut(s)	5274, 5590, 6176, 6299, 6344
AcoI	YGGCCR	5 cut(s)	82, 253, 4360, 4386, 6323
AcuI	CTGAAG	2 cut(s)	5298, 6119
AfaI	GTAC	8 cut(s)	314, 1145, 2369, 2873, 4450, 4791, 5950, 6232
AfiI	CCNNNNNNNGG	7 cut(s)	121, 528, 644, 1093, 2245, 4334, 5919
AjnI	CCWGG	4 cut(s)	156, 687, 5188, 5833
AjuI	GAANNNNNNNTTGG	2 cut(s)	640, 672
AleI	CACNNNNGTG	1 cut(s)	90
AloI	GAACNNNNNNTCC	2 cut(s)	5184, 5216
Alw26I	GTCTC	8 cut(s)	147, 204, 4481, 5105, 5401, 5559, 6337, 6427
AlwI	GGATC	5 cut(s)	5274, 5590, 6176, 6299, 6344
AlwNI	CAGNNNCTG	1 cut(s)	5591
Ama87I	CYCGRG	3 cut(s)	617, 5772, 6334
Aor13HI	TCCGGA	2 cut(s)	499, 6307
AoxI	GGCC	6 cut(s)	82, 253, 1000, 4360, 4386, 6323
ApeKI	GCWGC	4 cut(s)	370, 4349, 5252, 5665
ArsI	GACNNNNNNTTYG	2 cut(s)	2768, 2800
Asp700I	GAANNNNTTC	4 cut(s)	629, 2768, 2840, 4428
AspS9I	GGNCC	4 cut(s)	284, 388, 4380, 6190
AsuC2I	CCSGG	2 cut(s)	5437, 6427
AsuII	TTCGAA	3 cut(s)	5023, 5223, 5470
AvaI	CYCGRG	3 cut(s)	617, 5772, 6334
AvaII	GGWCC	4 cut(s)	284, 388, 4380, 6190
BalI	TGGCCA	2 cut(s)	4362, 4388
BanI	GGYRCC	2 cut(s)	111, 5845
BarI	GAAGNNNNNNTAC	2 cut(s)	5217, 5249
BbsI	GAAGAC	1 cut(s)	4590
BbvI	GCAGC	4 cut(s)	382, 4361, 5239, 5652
BccI	CCATC	5 cut(s)	216, 5824, 5833, 5860, 6069
BceAI	ACGGC	3 cut(s)	120, 5877, 6539
BciT130I	CCWGG	4 cut(s)	158, 689, 5190, 5835
BclI	TGATCA	1 cut(s)	6516
BcnI	CCSGG	2 cut(s)	5437, 6427
BcoDI	GTCTC	8 cut(s)	147, 204, 4481, 5105, 5401, 5559, 6337, 6427
BfmI	CTRYAG	3 cut(s)	4347, 4691, 5454
BfuAI	ACCTGC	1 cut(s)	183
BglII	AGATCT	4 cut(s)	463, 538, 4615, 4759
BisI	GCNGC	5 cut(s)	371, 4350, 5253, 5666, 5844
BlsI	GCNGC	5 cut(s)	372, 4351, 5254, 5667, 5845
BmcAI	AGTACT	1 cut(s)	5950
Bme1390I	CCNGG	6 cut(s)	158, 689, 5190, 5437, 5835, 6427
Bme18I	GGWCC	4 cut(s)	284, 388, 4380, 6190
BmeT110I	CYCGRG	3 cut(s)	617, 5772, 6334
BmgT120I	GGNCC	4 cut(s)	284, 388, 4380, 6190
BmiI	GGNNCC	4 cut(s)	113, 4953, 5212, 5847
BmrFI	CCNGG	6 cut(s)	158, 689, 5190, 5437, 5835, 6427
BmrI	ACTGGG	1 cut(s)	6006
BmuI	ACTGGG	1 cut(s)	6006
BpiI	GAAGAC	1 cut(s)	4590
BplI	GAGNNNNNCTC	4 cut(s)	636, 668, 4465, 4497
BpmI	CTGGAG	1 cut(s)	5211
Bpu14I	TTCGAA	3 cut(s)	5023, 5223, 5470
BpuEI	CTTGAG	5 cut(s)	338, 577, 715, 5116, 5965
BpuMI	CCSGG	2 cut(s)	5437, 6427
Bsa29I	ATCGAT	2 cut(s)	4774, 6171
BsaAI	YACGTR	1 cut(s)	5878
BsaBI	GATNNNNATC	1 cut(s)	789
BsaI	GGTCTC	2 cut(s)	147, 5401
BsaJI	CCNNGG	4 cut(s)	79, 287, 4383, 5834
BsaWI	WCCGGW	6 cut(s)	499, 4648, 4720, 4766, 6132, 6307
BsaXI	ACNNNNNCTCC	6 cut(s)	144, 174, 5184, 5214, 5619, 5649
Bsc4I	CCNNNNNNNGG	7 cut(s)	121, 528, 644, 1093, 2245, 4334, 5919
Bse118I	RCCGGY	1 cut(s)	251
Bse1I	ACTGG	5 cut(s)	4363, 4558, 5021, 6001, 6232
Bse3DI	GCAATG	5 cut(s)	134, 4502, 5183, 5431, 6346
Bse8I	GATNNNNATC	1 cut(s)	789
BseAI	TCCGGA	2 cut(s)	499, 6307
BseBI	CCWGG	4 cut(s)	158, 689, 5190, 5835
BseCI	ATCGAT	2 cut(s)	4774, 6171
BseDI	CCNNGG	4 cut(s)	79, 287, 4383, 5834
BseJI	GATNNNNATC	1 cut(s)	789
BseLI	CCNNNNNNNGG	7 cut(s)	121, 528, 644, 1093, 2245, 4334, 5919
BseMI	GCAATG	5 cut(s)	134, 4502, 5183, 5431, 6346
BseMII	CTCAG	5 cut(s)	34, 406, 481, 5361, 5742
BseNI	ACTGG	5 cut(s)	4363, 4558, 5021, 6001, 6232
BseXI	GCAGC	4 cut(s)	382, 4361, 5239, 5652
BseYI	CCCAGC	1 cut(s)	6370
BsgI	GTGCAG	1 cut(s)	4875
Bsh1285I	CGRYCG	1 cut(s)	6322
BshFI	GGCC	6 cut(s)	84, 255, 1002, 4362, 4388, 6325
BshNI	GGYRCC	2 cut(s)	111, 5845
BshVI	ATCGAT	2 cut(s)	4774, 6171
BsiEI	CGRYCG	1 cut(s)	6322
BsiHKCI	CYCGRG	3 cut(s)	617, 5772, 6334
BsiSI	CCGG	9 cut(s)	252, 500, 4649, 4721, 4767, 5436, 6133, 6308, 6426
BslFI	GGGAC	2 cut(s)	5573, 5970
BslI	CCNNNNNNNGG	7 cut(s)	121, 528, 644, 1093, 2245, 4334, 5919
BsmAI	GTCTC	8 cut(s)	147, 204, 4481, 5105, 5401, 5559, 6337, 6427
BsmFI	GGGAC	2 cut(s)	5573, 5970
BsmI	GAATGC	4 cut(s)	2770, 2842, 5937, 6484
BsnI	GGCC	6 cut(s)	84, 255, 1002, 4362, 4388, 6325
Bso31I	GGTCTC	2 cut(s)	147, 5401
BsoBI	CYCGRG	3 cut(s)	617, 5772, 6334
Bsp119I	TTCGAA	3 cut(s)	5023, 5223, 5470
Bsp13I	TCCGGA	2 cut(s)	499, 6307
BspACI	CCGC	7 cut(s)	219, 4378, 4638, 4710, 5002, 5843, 5864
BspANI	GGCC	6 cut(s)	84, 255, 1002, 4362, 4388, 6325
BspCNI	CTCAG	5 cut(s)	33, 405, 480, 5360, 5741
BspDI	ATCGAT	2 cut(s)	4774, 6171
BspEI	TCCGGA	2 cut(s)	499, 6307
BspLI	GGNNCC	4 cut(s)	113, 4953, 5212, 5847
BspMAI	CTGCAG	1 cut(s)	4351
BspMI	ACCTGC	1 cut(s)	183
BspPI	GGATC	5 cut(s)	5274, 5590, 6176, 6299, 6344
BspT104I	TTCGAA	3 cut(s)	5023, 5223, 5470
BspT107I	GGYRCC	2 cut(s)	111, 5845
BspTNI	GGTCTC	2 cut(s)	147, 5401
BsrDI	GCAATG	5 cut(s)	134, 4502, 5183, 5431, 6346
BsrFI	RCCGGY	1 cut(s)	251
BsrI	ACTGG	5 cut(s)	4363, 4558, 5021, 6001, 6232
BssAI	RCCGGY	1 cut(s)	251
BssECI	CCNNGG	4 cut(s)	79, 287, 4383, 5834
BssT1I	CCWWGG	1 cut(s)	4383
Bst2UI	CCWGG	4 cut(s)	158, 689, 5190, 5835
Bst4CI	ACNGT	9 cut(s)	92, 215, 288, 334, 4400, 4416, 4821, 5238, 6320
BstAPI	GCANNNNNTGC	1 cut(s)	140
BstBAI	YACGTR	1 cut(s)	5878
BstBI	TTCGAA	3 cut(s)	5023, 5223, 5470
BstC8I	GCNNGC	4 cut(s)	141, 415, 5663, 5937
BstDSI	CCRYGG	1 cut(s)	287
BstENI	CCTNNNNNAGG	1 cut(s)	642
BstMAI	GTCTC	8 cut(s)	147, 204, 4481, 5105, 5401, 5559, 6337, 6427
BstMCI	CGRYCG	1 cut(s)	6322
BstMWI	GCNNNNNNNGC	4 cut(s)	55, 140, 4898, 6367
BstNI	CCWGG	4 cut(s)	158, 689, 5190, 5835
BstNSI	RCATGY	2 cut(s)	29, 5939
BstSCI	CCNGG	6 cut(s)	156, 687, 5188, 5435, 5833, 6425
BstSFI	CTRYAG	3 cut(s)	4347, 4691, 5454
BstSNI	TACGTA	1 cut(s)	5878
BstV1I	GCAGC	4 cut(s)	382, 4361, 5239, 5652
BstV2I	GAAGAC	1 cut(s)	4590
BstX2I	RGATCY	6 cut(s)	463, 538, 4615, 4759, 5266, 6349
BstYI	RGATCY	6 cut(s)	463, 538, 4615, 4759, 5266, 6349
Bsu15I	ATCGAT	2 cut(s)	4774, 6171
BsuRI	GGCC	6 cut(s)	84, 255, 1002, 4362, 4388, 6325
BsuTUI	ATCGAT	2 cut(s)	4774, 6171
BtgI	CCRYGG	1 cut(s)	287
BtgZI	GCGATG	1 cut(s)	5838
BtsI	GCAGTG	2 cut(s)	235, 408
BtsIMutI	CAGTG	2 cut(s)	235, 408
BveI	ACCTGC	1 cut(s)	183
Cac8I	GCNNGC	4 cut(s)	141, 415, 5663, 5937
CaiI	CAGNNNCTG	1 cut(s)	5591
Cfr10I	RCCGGY	1 cut(s)	251
Cfr13I	GGNCC	4 cut(s)	284, 388, 4380, 6190
ClaI	ATCGAT	2 cut(s)	4774, 6171
CsiI	ACCWGGT	1 cut(s)	156
Csp6I	GTAC	8 cut(s)	313, 1144, 2368, 2872, 4449, 4790, 5949, 6231
CviQI	GTAC	8 cut(s)	313, 1144, 2368, 2872, 4449, 4790, 5949, 6231
DraI	TTTAAA	1 cut(s)	681
EaeI	YGGCCR	5 cut(s)	82, 253, 4360, 4386, 6323
EciI	GGCGGA	1 cut(s)	5879
Eco105I	TACGTA	1 cut(s)	5878
Eco130I	CCWWGG	1 cut(s)	4383
Eco31I	GGTCTC	2 cut(s)	147, 5401
Eco32I	GATATC	2 cut(s)	1012, 5128
Eco47I	GGWCC	4 cut(s)	284, 388, 4380, 6190
Eco57I	CTGAAG	2 cut(s)	5298, 6119
Eco88I	CYCGRG	3 cut(s)	617, 5772, 6334
EcoNI	CCTNNNNNAGG	1 cut(s)	642
EcoRI	GAATTC	2 cut(s)	982, 4843
EcoRII	CCWGG	4 cut(s)	156, 687, 5188, 5833
EcoRV	GATATC	2 cut(s)	1012, 5128
EcoT14I	CCWWGG	1 cut(s)	4383
EcoT22I	ATGCAT	6 cut(s)	136, 1402, 1474, 5937, 5941, 6463
ErhI	CCWWGG	1 cut(s)	4383
FaqI	GGGAC	2 cut(s)	5573, 5970
FbaI	TGATCA	1 cut(s)	6516
FblI	GTMKAC	1 cut(s)	4690
Fnu4HI	GCNGC	5 cut(s)	371, 4350, 5253, 5666, 5844
Fsp4HI	GCNGC	5 cut(s)	371, 4350, 5253, 5666, 5844
GluI	GCNGC	5 cut(s)	371, 4350, 5253, 5666, 5844
GsaI	CCCAGC	1 cut(s)	6374
GsuI	CTGGAG	1 cut(s)	5211
HaeIII	GGCC	6 cut(s)	84, 255, 1002, 4362, 4388, 6325
HapII	CCGG	9 cut(s)	252, 500, 4649, 4721, 4767, 5436, 6133, 6308, 6426
HindIII	AAGCTT	2 cut(s)	581, 5573
HpaII	CCGG	9 cut(s)	252, 500, 4649, 4721, 4767, 5436, 6133, 6308, 6426
Hpy166II	GTNNAC	5 cut(s)	235, 1490, 2714, 3208, 4691
Hpy8I	GTNNAC	5 cut(s)	235, 1490, 2714, 3208, 4691
HpyCH4III	ACNGT	9 cut(s)	92, 215, 288, 334, 4400, 4416, 4821, 5238, 6320
HpyCH4IV	ACGT	2 cut(s)	99, 5877
HpyF10VI	GCNNNNNNNGC	4 cut(s)	55, 140, 4898, 6367
HpySE526I	ACGT	2 cut(s)	99, 5877
Kpn2I	TCCGGA	2 cut(s)	499, 6307
Ksp22I	TGATCA	1 cut(s)	6516
LmnI	GCTCC	6 cut(s)	489, 502, 753, 5640, 5658, 5732
Lsp1109I	GCAGC	4 cut(s)	382, 4361, 5239, 5652
MabI	ACCWGGT	1 cut(s)	156
MaeII	ACGT	2 cut(s)	99, 5877
MfeI	CAATTG	3 cut(s)	42, 655, 4964
MflI	RGATCY	6 cut(s)	463, 538, 4615, 4759, 5266, 6349
MlsI	TGGCCA	2 cut(s)	4362, 4388
MluNI	TGGCCA	2 cut(s)	4362, 4388
MlyI	GAGTC	4 cut(s)	240, 4483, 5107, 6429
Mox20I	TGGCCA	2 cut(s)	4362, 4388
Mph1103I	ATGCAT	6 cut(s)	136, 1402, 1474, 5937, 5941, 6463
MroI	TCCGGA	2 cut(s)	499, 6307
MroXI	GAANNNNTTC	4 cut(s)	629, 2768, 2840, 4428
MscI	TGGCCA	2 cut(s)	4362, 4388
MslI	CAYNNNNRTG	8 cut(s)	30, 90, 276, 1956, 3612, 3756, 4044, 5677
Msp20I	TGGCCA	2 cut(s)	4362, 4388
MspI	CCGG	9 cut(s)	252, 500, 4649, 4721, 4767, 5436, 6133, 6308, 6426
MspR9I	CCNGG	6 cut(s)	158, 689, 5190, 5437, 5835, 6427
MunI	CAATTG	3 cut(s)	42, 655, 4964
Mva1269I	GAATGC	4 cut(s)	2770, 2842, 5937, 6484
MvaI	CCWGG	4 cut(s)	158, 689, 5190, 5835
MwoI	GCNNNNNNNGC	4 cut(s)	55, 140, 4898, 6367
NciI	CCSGG	2 cut(s)	5437, 6427
NlaIV	GGNNCC	4 cut(s)	113, 4953, 5212, 5847
NmeAIII	GCCGAG	1 cut(s)	60
NmuCI	GTSAC	2 cut(s)	100, 2784
NsiI	ATGCAT	6 cut(s)	136, 1402, 1474, 5937, 5941, 6463
NspI	RCATGY	2 cut(s)	29, 5939
NspV	TTCGAA	3 cut(s)	5023, 5223, 5470
OliI	CACNNNNGTG	1 cut(s)	90
PaeI	GCATGC	1 cut(s)	5939
PaeR7I	CTCGAG	2 cut(s)	5772, 6334
PctI	GAATGC	4 cut(s)	2770, 2842, 5937, 6484
PdmI	GAANNNNTTC	4 cut(s)	629, 2768, 2840, 4428
PfoI	TCCNGGA	2 cut(s)	5435, 6425
PkrI	GCNGC	5 cut(s)	372, 4351, 5254, 5667, 5845
PleI	GAGTC	4 cut(s)	239, 4482, 5106, 6428
PpsI	GAGTC	4 cut(s)	239, 4482, 5106, 6428
Ppu21I	YACGTR	1 cut(s)	5878
Psp6I	CCWGG	4 cut(s)	156, 687, 5188, 5833
PspFI	CCCAGC	1 cut(s)	6370
PspGI	CCWGG	4 cut(s)	156, 687, 5188, 5833
PspN4I	GGNNCC	4 cut(s)	113, 4953, 5212, 5847
PspPI	GGNCC	4 cut(s)	284, 388, 4380, 6190
PstI	CTGCAG	1 cut(s)	4351
PstNI	CAGNNNCTG	1 cut(s)	5591
PsuI	RGATCY	6 cut(s)	463, 538, 4615, 4759, 5266, 6349
RsaI	GTAC	8 cut(s)	314, 1145, 2369, 2873, 4450, 4791, 5950, 6232
RsaNI	GTAC	8 cut(s)	313, 1144, 2368, 2872, 4449, 4790, 5949, 6231
RseI	CAYNNNNRTG	8 cut(s)	30, 90, 276, 1956, 3612, 3756, 4044, 5677
SatI	GCNGC	5 cut(s)	371, 4350, 5253, 5666, 5844
Sau96I	GGNCC	4 cut(s)	284, 388, 4380, 6190
ScaI	AGTACT	1 cut(s)	5950
SchI	GAGTC	4 cut(s)	240, 4483, 5107, 6429
ScrFI	CCNGG	6 cut(s)	158, 689, 5190, 5437, 5835, 6427
SexAI	ACCWGGT	1 cut(s)	156
SfcI	CTRYAG	3 cut(s)	4347, 4691, 5454
Sfr274I	CTCGAG	2 cut(s)	5772, 6334
SfuI	TTCGAA	3 cut(s)	5023, 5223, 5470
SinI	GGWCC	4 cut(s)	284, 388, 4380, 6190
SlaI	CTCGAG	2 cut(s)	5772, 6334
SmiMI	CAYNNNNRTG	8 cut(s)	30, 90, 276, 1956, 3612, 3756, 4044, 5677
SmlI	CTYRAG	7 cut(s)	317, 556, 694, 5095, 5772, 5980, 6334
SmoI	CTYRAG	7 cut(s)	317, 556, 694, 5095, 5772, 5980, 6334
SnaBI	TACGTA	1 cut(s)	5878
SphI	GCATGC	1 cut(s)	5939
SsiI	CCGC	7 cut(s)	219, 4378, 4638, 4710, 5002, 5843, 5864
SspI	AATATT	2 cut(s)	383, 885
StyD4I	CCNGG	6 cut(s)	156, 687, 5188, 5435, 5833, 6425
StyI	CCWWGG	1 cut(s)	4383
TaaI	ACNGT	9 cut(s)	92, 215, 288, 334, 4400, 4416, 4821, 5238, 6320
TaiI	ACGT	2 cut(s)	102, 5880
TaqI	TCGA	8 cut(s)	4774, 5023, 5223, 5412, 5470, 5773, 6171, 6335
TatI	WGTACW	2 cut(s)	4448, 5948
TauI	GCSGC	1 cut(s)	5846
TscAI	CASTG	2 cut(s)	242, 415
TseFI	GTSAC	2 cut(s)	100, 2784
TseI	GCWGC	4 cut(s)	370, 4349, 5252, 5665
Tsp45I	GTSAC	2 cut(s)	100, 2784
TspGWI	ACGGA	1 cut(s)	995
TspRI	CASTG	2 cut(s)	242, 415
VpaK11BI	GGWCC	4 cut(s)	284, 388, 4380, 6190
XagI	CCTNNNNNAGG	1 cut(s)	642
XbaI	TCTAGA	1 cut(s)	535
XceI	RCATGY	2 cut(s)	29, 5939
XhoI	CTCGAG	2 cut(s)	5772, 6334
XmiI	GTMKAC	1 cut(s)	4690
XmnI	GAANNNNTTC	4 cut(s)	629, 2768, 2840, 4428
ZrmI	AGTACT	1 cut(s)	5950
Zsp2I	ATGCAT	6 cut(s)	136, 1402, 1474, 5937, 5941, 6463

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.