RchiOBHm_Chr7g0207031

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
24479942 .. 24481896
1955 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18529

Sequence Viewer

Length: 1860 bp
ATGTTTTTCAGTATAATGAGTGGTAGATCTATGCATTTTGTTTTGGTTGGCCTTGTGTGCCTGGCCGTTGCCTCTGCTATTTCTTGTTCTAGTGTTGGAAGCTCCTACAATATTATGTGCTTGGAGAGTGAAAGGCAGGCTCTTCTACAGTTCAAACAAGGCCTTGTGGATGAGTCCAATGCTCTTGCCTCTTGGAAAAGTGAGAAAGATTGCTGCAAGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTTACAGGTCTTAATTTCTCCTTTAGTTGTGATTCATATTTCAATTATAGTGAAGTTCCTTTAAGAGGTGCAATGAGTCCTTCACTACTTGAATTACCATTTCTAAATTACTTGGACCTCAGTTATAATGATTTTGAAGGAATTGTGATTCCCAAGCTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGCACATGCTAATTTCAGTGGACTTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTTCGGGAACCATGATGCTAGTTCTGAAAACCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGGCATGGCTGAATTTGTCTGAGGCTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTTACTGACAAAGCTTCAGTTATCCCAGTCCAATGTCAGCAGCAACTTTGTCCATATTGATCTCTCTCATAGCCAACTGGAAGGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTAGATCTGTCTTGGAATAAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTATGGAGCAACCAATTGTCTGAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTATGACCCTGGACTTGAGTTATAACCAGTTTTGGGGGTCATGGCCAGATTTGGCACGATTTTCAAAGTTAAGAGAGTTACATCTTGGCAAAAATCAACTAAATGGGTCTGTACCCGCGAGTGTCGGGCAACTCTCTAGCCTTGAACATCTATCTCTCTCGGGGAATTCTTTCACTGGTGTCATAATAGAATCCCACTTTCTGAAGCTCTCTCATTTACACTATTTGGGTCTTTCTGGTAATTATTTCTCTATCAACCTGAGCTCTGATTGGAATCCACCATTTCAACTTACTGGTCTGTTAGACATGTCCTCCTACAAGCTGGGCCCAGCTTTTCCCAAATGGATTCTAACGCAAACAAATCTTACCGGTCTTTATCTCTCTAATGCTGGACTATCAGGATCATTACCTAACAAGTTCTGGGATATATTTTCTGGCTTATTTCAGTTAGATCTCTCTATGAACCAAATCCGTGGAAAACTACCGAATCTGTCAACAATGAGCTTGAGTAATGTTTATTTGTCTTCTAATCTACTTTCTGGTGCAATGCCATCATTTTCTCCTGAGCTCAGAAAGTTGTATCTCTCGAATAACAAGTTTTCTGAGCCGCTGTCTTGCTTCTGTGCAACGCAGGCTCCATATTTGGGTTTGATTGACATTTCTGAGAACCAACTGTCAGGAGAGCTTCCTAACTATTGGAAGCAATTCCAAGGATTGGAAGCTTTGAAATTGGAGAAAAATAAATTATCTGGAAAAATACCAAGCTCTTTAGGCAATCTAAAGAGACTTACGTTATTGAGTTTGAATGCTAACAACTTTTCAGGAGAATTGCCTTCTCTAGAGAACTGTACCAACACTACGTCAATAATGGCATCAGACGACAGTGACGACAGTTTTGGACTGTCGTCTGATGAGGTTGGGCGCTGTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

619

Amino Acids

68.22

Weight (kDa)

5.41

Isoelectric Point (pI)

38.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 80 1.6e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 115 - 233 1.2e-09 Leucine-rich repeat region
LRR_8 PF13855 236 - 292 8.1e-07 Leucine rich repeat
LRR_8 PF13855 309 - 366 1.3e-07 Leucine rich repeat
LRR_8 PF13855 332 - 391 4.7e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 381, 951
AccB7I CCANNNNNTGG 1 cut(s) 1642
AccII CGCG 1 cut(s) 1046
AciI CCGC 2 cut(s) 1044, 1535
AclWI GGATC 1 cut(s) 1336
AcoI YGGCCR 3 cut(s) 63, 629, 971
AcsI RAATTY 2 cut(s) 607, 1093
AcuI CTGAAG 2 cut(s) 653, 1151
AfaI GTAC 2 cut(s) 1041, 1777
AfiI CCNNNNNNNGG 6 cut(s) 320, 488, 595, 961, 1571, 1642
AflIII ACRYGT 1 cut(s) 1233
AgeI ACCGGT 1 cut(s) 1295
AjnI CCWGG 2 cut(s) 60, 936
Alw21I GWGCWC 2 cut(s) 1193, 1497
Alw26I GTCTC 1 cut(s) 1705
AlwI GGATC 1 cut(s) 1336
Ama87I CYCGRG 1 cut(s) 1087
AoxI GGCC 6 cut(s) 49, 63, 160, 629, 971, 1252
ApaI GGGCCC 1 cut(s) 1256
ApeKI GCWGC 3 cut(s) 213, 693, 840
ApoI RAATTY 2 cut(s) 607, 1093
ArsI GACNNNNNNTTYG 2 cut(s) 1805, 1837
AsiGI ACCGGT 1 cut(s) 1295
Asp700I GAANNNNTTC 2 cut(s) 1097, 1631
AspLEI GCGC 1 cut(s) 1851
AspS9I GGNCC 4 cut(s) 370, 737, 1252, 1253
AvaI CYCGRG 1 cut(s) 1087
AvaII GGWCC 2 cut(s) 370, 737
BaeGI GKGCMC 1 cut(s) 1256
BalI TGGCCA 2 cut(s) 631, 973
BanII GRGCYC 3 cut(s) 1193, 1256, 1497
BarI GAAGNNNNNNTAC 2 cut(s) 798, 830
BbsI GAAGAC 2 cut(s) 745, 1443
Bbv12I GWGCWC 2 cut(s) 1193, 1497
BbvI GCAGC 3 cut(s) 200, 705, 852
BccI CCATC 2 cut(s) 749, 1486
BceAI ACGGC 1 cut(s) 50
BciT130I CCWGG 2 cut(s) 62, 938
BciVI GTATCC 1 cut(s) 807
BcoDI GTCTC 1 cut(s) 1705
BfaI CTAG 6 cut(s) 90, 540, 773, 782, 1065, 1766
BfmI CTRYAG 1 cut(s) 146
BfoI RGCGCY 1 cut(s) 1852
BfuI GTATCC 1 cut(s) 807
BglII AGATCT 3 cut(s) 26, 784, 1378
BisI GCNGC 4 cut(s) 214, 694, 841, 1535
BlsI GCNGC 4 cut(s) 215, 695, 842, 1536
Bme1390I CCNGG 2 cut(s) 62, 938
Bme18I GGWCC 2 cut(s) 370, 737
BmeT110I CYCGRG 1 cut(s) 1087
BmgT120I GGNCC 4 cut(s) 370, 737, 1252, 1253
BmiI GGNNCC 4 cut(s) 530, 739, 1254, 1563
BmrFI CCNGG 2 cut(s) 62, 938
BmrI ACTGGG 1 cut(s) 673
BmsI GCATC 2 cut(s) 526, 1808
BmuI ACTGGG 1 cut(s) 673
BoxI GACNNNNGTC 1 cut(s) 1831
BpiI GAAGAC 2 cut(s) 745, 1443
Bpu10I CCTNAGC 2 cut(s) 1187, 1491
BpuEI CTTGAG 4 cut(s) 575, 601, 964, 1453
BsaBI GATNNNNATC 1 cut(s) 1200
BsaJI CCNNGG 3 cut(s) 936, 1399, 1636
BsaWI WCCGGW 1 cut(s) 1295
BsaXI ACNNNNNCTCC 4 cut(s) 1223, 1253, 1546, 1576
Bsc4I CCNNNNNNNGG 6 cut(s) 320, 488, 595, 961, 1571, 1642
Bse118I RCCGGY 1 cut(s) 1295
Bse1I ACTGG 5 cut(s) 679, 735, 955, 1108, 1225
Bse3DI GCAATG 2 cut(s) 333, 1479
Bse8I GATNNNNATC 1 cut(s) 1200
BseBI CCWGG 2 cut(s) 62, 938
BseDI CCNNGG 3 cut(s) 936, 1399, 1636
BseGI GGATG 2 cut(s) 175, 741
BseJI GATNNNNATC 1 cut(s) 1200
BseLI CCNNNNNNNGG 6 cut(s) 320, 488, 595, 961, 1571, 1642
BseMI GCAATG 2 cut(s) 333, 1479
BseMII CTCAG 8 cut(s) 388, 606, 909, 1178, 1482, 1510, 1521, 1581
BseNI ACTGG 5 cut(s) 679, 735, 955, 1108, 1225
BseSI GKGCMC 1 cut(s) 1256
BseXI GCAGC 3 cut(s) 200, 705, 852
BseYI CCCAGC 2 cut(s) 1249, 1255
Bsh1236I CGCG 1 cut(s) 1046
BshFI GGCC 6 cut(s) 51, 65, 162, 631, 973, 1254
BshTI ACCGGT 1 cut(s) 1295
BsiHKAI GWGCWC 2 cut(s) 1193, 1497
BsiHKCI CYCGRG 1 cut(s) 1087
BsiSI CCGG 1 cut(s) 1296
BslFI GGGAC 1 cut(s) 723
BslI CCNNNNNNNGG 6 cut(s) 320, 488, 595, 961, 1571, 1642
BsmAI GTCTC 1 cut(s) 1705
BsmFI GGGAC 1 cut(s) 723
BsmI GAATGC 1 cut(s) 1738
BsnI GGCC 6 cut(s) 51, 65, 162, 631, 973, 1254
BsoBI CYCGRG 1 cut(s) 1087
Bsp120I GGGCCC 1 cut(s) 1252
Bsp1286I GDGCHC 3 cut(s) 1193, 1256, 1497
Bsp143I GATC 6 cut(s) 26, 517, 712, 784, 1328, 1378
BspACI CCGC 2 cut(s) 1044, 1535
BspANI GGCC 6 cut(s) 51, 65, 162, 631, 973, 1254
BspCNI CTCAG 8 cut(s) 387, 607, 910, 1179, 1483, 1509, 1522, 1582
BspFNI CGCG 1 cut(s) 1046
BspLI GGNNCC 4 cut(s) 530, 739, 1254, 1563
BspPI GGATC 1 cut(s) 1336
BspQI GCTCTTC 1 cut(s) 147
BsrDI GCAATG 2 cut(s) 333, 1479
BsrFI RCCGGY 1 cut(s) 1295
BsrI ACTGG 5 cut(s) 679, 735, 955, 1108, 1225
BssAI RCCGGY 1 cut(s) 1295
BssECI CCNNGG 3 cut(s) 936, 1399, 1636
BssMI GATC 6 cut(s) 26, 517, 712, 784, 1328, 1378
BssT1I CCWWGG 1 cut(s) 1636
Bst2UI CCWGG 2 cut(s) 62, 938
Bst4CI ACNGT 6 cut(s) 150, 1602, 1775, 1811, 1820, 1830
Bst6I CTCTTC 1 cut(s) 147
BstC8I GCNNGC 5 cut(s) 138, 235, 647, 764, 1560
BstDEI CTNAG 9 cut(s) 374, 615, 844, 918, 1187, 1491, 1496, 1530, 1590
BstDSI CCRYGG 1 cut(s) 1399
BstENI CCTNNNNNAGG 1 cut(s) 318
BstF5I GGATG 2 cut(s) 175, 741
BstFNI CGCG 1 cut(s) 1046
BstH2I RGCGCY 1 cut(s) 1852
BstHHI GCGC 1 cut(s) 1851
BstKTI GATC 6 cut(s) 29, 520, 715, 787, 1331, 1381
BstMAI GTCTC 1 cut(s) 1705
BstMBI GATC 6 cut(s) 26, 517, 712, 784, 1328, 1378
BstMWI GCNNNNNNNGC 3 cut(s) 57, 1559, 1698
BstNI CCWGG 2 cut(s) 62, 938
BstNSI RCATGY 4 cut(s) 237, 458, 766, 1237
BstPAI GACNNNNGTC 1 cut(s) 1831
BstSCI CCNGG 2 cut(s) 60, 936
BstSFI CTRYAG 1 cut(s) 146
BstSLI GKGCMC 1 cut(s) 1256
BstUI CGCG 1 cut(s) 1046
BstV1I GCAGC 3 cut(s) 200, 705, 852
BstV2I GAAGAC 2 cut(s) 745, 1443
BstX2I RGATCY 3 cut(s) 26, 784, 1378
BstXI CCANNNNNNTGG 1 cut(s) 1400
BstYI RGATCY 3 cut(s) 26, 784, 1378
BsuI GTATCC 1 cut(s) 807
BsuRI GGCC 6 cut(s) 51, 65, 162, 631, 973, 1254
BtgI CCRYGG 1 cut(s) 1399
BtsCI GGATG 2 cut(s) 175, 741
BtsIMutI CAGTG 3 cut(s) 472, 1101, 1816
Cac8I GCNNGC 5 cut(s) 138, 235, 647, 764, 1560
CfoI GCGC 1 cut(s) 1851
Cfr10I RCCGGY 1 cut(s) 1295
Cfr13I GGNCC 4 cut(s) 370, 737, 1252, 1253
Csp6I GTAC 2 cut(s) 1040, 1776
CspAI ACCGGT 1 cut(s) 1295
CviAII CATG 9 cut(s) 234, 254, 455, 533, 595, 600, 763, 969, 1234
CviQI GTAC 2 cut(s) 1040, 1776
DdeI CTNAG 9 cut(s) 374, 615, 844, 918, 1187, 1491, 1496, 1530, 1590
DpnI GATC 6 cut(s) 28, 519, 714, 786, 1330, 1380
DpnII GATC 6 cut(s) 26, 517, 712, 784, 1328, 1378
EaeI YGGCCR 3 cut(s) 63, 629, 971
Eam1104I CTCTTC 1 cut(s) 147
EarI CTCTTC 1 cut(s) 147
Ecl136II GAGCTC 2 cut(s) 1191, 1495
Eco130I CCWWGG 1 cut(s) 1636
Eco147I AGGCCT 1 cut(s) 162
Eco24I GRGCYC 3 cut(s) 1193, 1256, 1497
Eco47I GGWCC 2 cut(s) 370, 737
Eco53kI GAGCTC 2 cut(s) 1191, 1495
Eco57I CTGAAG 2 cut(s) 653, 1151
Eco88I CYCGRG 1 cut(s) 1087
EcoICRI GAGCTC 2 cut(s) 1191, 1495
EcoNI CCTNNNNNAGG 1 cut(s) 318
EcoO109I RGGNCCY 1 cut(s) 737
EcoRI GAATTC 1 cut(s) 1093
EcoRII CCWGG 2 cut(s) 60, 936
EcoT14I CCWWGG 1 cut(s) 1636
EcoT22I ATGCAT 1 cut(s) 36
EcoT38I GRGCYC 3 cut(s) 1193, 1256, 1497
ErhI CCWWGG 1 cut(s) 1636
FaeI CATG 9 cut(s) 237, 257, 458, 536, 598, 603, 766, 972, 1237
FaqI GGGAC 1 cut(s) 723
FatI CATG 9 cut(s) 233, 253, 454, 532, 594, 599, 762, 968, 1233
FauI CCCGC 1 cut(s) 1051
Fnu4HI GCNGC 4 cut(s) 214, 694, 841, 1535
FokI GGATG 2 cut(s) 182, 728
FriOI GRGCYC 3 cut(s) 1193, 1256, 1497
Fsp4HI GCNGC 4 cut(s) 214, 694, 841, 1535
FspBI CTAG 6 cut(s) 90, 540, 773, 782, 1065, 1766
GlaI GCGC 1 cut(s) 1850
GluI GCNGC 4 cut(s) 214, 694, 841, 1535
GsaI CCCAGC 2 cut(s) 1253, 1259
HaeII RGCGCY 1 cut(s) 1852
HaeIII GGCC 6 cut(s) 51, 65, 162, 631, 973, 1254
HapII CCGG 1 cut(s) 1296
HhaI GCGC 1 cut(s) 1851
Hin1II CATG 9 cut(s) 237, 257, 458, 536, 598, 603, 766, 972, 1237
Hin6I GCGC 1 cut(s) 1849
HinP1I GCGC 1 cut(s) 1849
HincII GTYRAC 2 cut(s) 855, 1422
HindII GTYRAC 2 cut(s) 855, 1422
HindIII AAGCTT 2 cut(s) 665, 1647
HpaII CCGG 1 cut(s) 1296
Hpy166II GTNNAC 3 cut(s) 470, 855, 1422
Hpy188III TCNNGA 9 cut(s) 515, 526, 1326, 1490, 1513, 1605, 1677, 1749, 1766
Hpy8I GTNNAC 3 cut(s) 470, 855, 1422
HpyAV CCTTC 5 cut(s) 345, 386, 728, 800, 1770
HpyCH4III ACNGT 6 cut(s) 150, 1602, 1775, 1811, 1820, 1830
HpyCH4IV ACGT 2 cut(s) 1718, 1787
HpyCH4V TGCA 9 cut(s) 34, 216, 237, 326, 452, 508, 840, 1472, 1553
HpyF10VI GCNNNNNNNGC 3 cut(s) 57, 1559, 1698
HpyF3I CTNAG 9 cut(s) 374, 615, 844, 918, 1187, 1491, 1496, 1530, 1590
HpySE526I ACGT 2 cut(s) 1718, 1787
Hsp92II CATG 9 cut(s) 237, 257, 458, 536, 598, 603, 766, 972, 1237
HspAI GCGC 1 cut(s) 1849
Kzo9I GATC 6 cut(s) 26, 517, 712, 784, 1328, 1378
LguI GCTCTTC 1 cut(s) 147
LmnI GCTCC 3 cut(s) 107, 864, 1567
Lsp1109I GCAGC 3 cut(s) 200, 705, 852
LweI GCATC 2 cut(s) 526, 1808
MaeI CTAG 6 cut(s) 90, 540, 773, 782, 1065, 1766
MaeII ACGT 2 cut(s) 1718, 1787
MaeIII GTNAC 4 cut(s) 256, 775, 1005, 1811
MalI GATC 6 cut(s) 28, 519, 714, 786, 1330, 1380
MboI GATC 6 cut(s) 26, 517, 712, 784, 1328, 1378
MboII GAAGA 4 cut(s) 134, 567, 745, 1443
MfeI CAATTG 2 cut(s) 431, 872
MflI RGATCY 3 cut(s) 26, 784, 1378
MhlI GDGCHC 3 cut(s) 1193, 1256, 1497
MlsI TGGCCA 2 cut(s) 631, 973
MluNI TGGCCA 2 cut(s) 631, 973
MlyI GAGTC 5 cut(s) 182, 340, 436, 857, 887
MmeI TCCRAC 1 cut(s) 76
Mox20I TGGCCA 2 cut(s) 631, 973
Mph1103I ATGCAT 1 cut(s) 36
MroXI GAANNNNTTC 2 cut(s) 1097, 1631
MscI TGGCCA 2 cut(s) 631, 973
MseI TTAA 6 cut(s) 267, 317, 641, 900, 998, 1858
MslI CAYNNNNRTG 2 cut(s) 761, 929
Msp20I TGGCCA 2 cut(s) 631, 973
MspA1I CMGCKG 1 cut(s) 1537
MspI CCGG 1 cut(s) 1296
MspR9I CCNGG 2 cut(s) 62, 938
MunI CAATTG 2 cut(s) 431, 872
Mva1269I GAATGC 1 cut(s) 1738
MvaI CCWGG 2 cut(s) 62, 938
MvnI CGCG 1 cut(s) 1046
MwoI GCNNNNNNNGC 3 cut(s) 57, 1559, 1698
NdeII GATC 6 cut(s) 26, 517, 712, 784, 1328, 1378
NlaIII CATG 9 cut(s) 237, 257, 458, 536, 598, 603, 766, 972, 1237
NlaIV GGNNCC 4 cut(s) 530, 739, 1254, 1563
NmuCI GTSAC 1 cut(s) 1811
NsiI ATGCAT 1 cut(s) 36
NspI RCATGY 4 cut(s) 237, 458, 766, 1237
PaeI GCATGC 2 cut(s) 237, 766
PceI AGGCCT 1 cut(s) 162
PciI ACATGT 1 cut(s) 1233
PciSI GCTCTTC 1 cut(s) 147
PcsI WCGNNNNNNNCGW 1 cut(s) 1812
PctI GAATGC 1 cut(s) 1738
PdmI GAANNNNTTC 2 cut(s) 1097, 1631
PfeI GAWTC 6 cut(s) 287, 403, 1118, 1201, 1273, 1414
PflMI CCANNNNNTGG 1 cut(s) 1642
PinAI ACCGGT 1 cut(s) 1295
PkrI GCNGC 4 cut(s) 215, 695, 842, 1536
PleI GAGTC 5 cut(s) 181, 339, 435, 856, 887
PpsI GAGTC 5 cut(s) 181, 339, 435, 856, 887
PpuMI RGGWCCY 1 cut(s) 737
PscI ACATGT 1 cut(s) 1233
PshAI GACNNNNGTC 1 cut(s) 1831
PsiI TTATAA 2 cut(s) 381, 951
Psp124BI GAGCTC 2 cut(s) 1193, 1497
Psp5II RGGWCCY 1 cut(s) 737
Psp6I CCWGG 2 cut(s) 60, 936
PspFI CCCAGC 2 cut(s) 1249, 1255
PspGI CCWGG 2 cut(s) 60, 936
PspN4I GGNNCC 4 cut(s) 530, 739, 1254, 1563
PspOMI GGGCCC 1 cut(s) 1252
PspPI GGNCC 4 cut(s) 370, 737, 1252, 1253
PspPPI RGGWCCY 1 cut(s) 737
PsuI RGATCY 3 cut(s) 26, 784, 1378
RsaI GTAC 2 cut(s) 1041, 1777
RsaNI GTAC 2 cut(s) 1040, 1776
RseI CAYNNNNRTG 2 cut(s) 761, 929
SacI GAGCTC 2 cut(s) 1193, 1497
SapI GCTCTTC 1 cut(s) 147
SaqAI TTAA 6 cut(s) 267, 317, 641, 900, 998, 1858
SatI GCNGC 4 cut(s) 214, 694, 841, 1535
Sau3AI GATC 6 cut(s) 26, 517, 712, 784, 1328, 1378
Sau96I GGNCC 4 cut(s) 370, 737, 1252, 1253
SchI GAGTC 5 cut(s) 182, 340, 436, 857, 887
ScrFI CCNGG 2 cut(s) 62, 938
SduI GDGCHC 3 cut(s) 1193, 1256, 1497
SfaNI GCATC 2 cut(s) 526, 1808
SfcI CTRYAG 1 cut(s) 146
SinI GGWCC 2 cut(s) 370, 737
SmiMI CAYNNNNRTG 2 cut(s) 761, 929
SmlI CTYRAG 4 cut(s) 554, 580, 943, 1432
SmoI CTYRAG 4 cut(s) 554, 580, 943, 1432
SphI GCATGC 2 cut(s) 237, 766
SseBI AGGCCT 1 cut(s) 162
SsiI CCGC 2 cut(s) 1044, 1535
SspI AATATT 1 cut(s) 112
SspMI CTAG 6 cut(s) 90, 540, 773, 782, 1065, 1766
SstI GAGCTC 2 cut(s) 1193, 1497
StuI AGGCCT 1 cut(s) 162
StyD4I CCNGG 2 cut(s) 60, 936
StyI CCWWGG 1 cut(s) 1636
TaaI ACNGT 6 cut(s) 150, 1602, 1775, 1811, 1820, 1830
TaiI ACGT 2 cut(s) 1721, 1790
TaqI TCGA 1 cut(s) 1514
TauI GCSGC 1 cut(s) 1537
TfiI GAWTC 6 cut(s) 287, 403, 1118, 1201, 1273, 1414
Tru1I TTAA 6 cut(s) 267, 317, 641, 900, 998, 1858
Tru9I TTAA 6 cut(s) 267, 317, 641, 900, 998, 1858
TscAI CASTG 3 cut(s) 472, 1108, 1816
TseFI GTSAC 1 cut(s) 1811
TseI GCWGC 3 cut(s) 213, 693, 840
Tsp45I GTSAC 1 cut(s) 1811
TspDTI ATGAA 2 cut(s) 279, 1403
TspGWI ACGGA 1 cut(s) 1388
TspRI CASTG 3 cut(s) 472, 1108, 1816
Van91I CCANNNNNTGG 1 cut(s) 1642
VpaK11BI GGWCC 2 cut(s) 370, 737
XagI CCTNNNNNAGG 1 cut(s) 318
XapI RAATTY 2 cut(s) 607, 1093
XbaI TCTAGA 1 cut(s) 1765
XceI RCATGY 4 cut(s) 237, 458, 766, 1237
XmnI GAANNNNTTC 2 cut(s) 1097, 1631
XspI CTAG 6 cut(s) 90, 540, 773, 782, 1065, 1766
Zsp2I ATGCAT 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.