pycom01g08720

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
9646193 .. 9648861
2669 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g08720.1

Sequence Viewer

Length: 2427 bp
ATGGGTCGGCGTCCACTGCAGCAACCGAACCAACCATGTTACTCAACTTCATCTTGGGTGTATTTTTTGCAAGGTAAGATGATGAGTCCCAAACTACTTGAGTTGCAGCATTTGAAATATTTGGACCTTTCTTCCATCAACTTCAATGGGACCCGGCTTCCATATTTCATTGGTTCTCTTTCCAATTTAAGACACCTCGATCTCTCTTTTGCTTCTTTTGGTGGTCGATTTCCAGGTCAAGTTGGAAACCTTACCCACTTGCAATATCTTGATCTCAGTGGGAATGGCTTTAACAGTGTGGAAAATCTGAATTCATGGCTCCCTCGTCTTTCTTCTTTAACATATTTGGATCTGAGTAGCACCAATCTCAGTCATGTTCATGACTGGCTGGAAACAGTTAGCAAGCTCCCTAAACTTACAAACTTAACGTTACAGGGGTGTGGTCTTCCTTCTCCTGTAATCCATTCCAGTACTCTTTTTAACATAAATTCTTCAAAATCTCTTGCTCATGTTGACCTCTCTAGCAACCAATGCACTTCTCCTTCAATATATTTATGGTTGTCAAACTACAATGCCAGCCTTGTCTATCTTGACCTCAGTAACAGCAGTTTAACTGGTTTAATTCCCAGTAGTCTCTGTACCTCTATAACAATCATCTTTCTGGATCAATTCCTGAAGATCGATCTCACAAACTTTTCATCGTTGAAAGTATTATATGTCTTTGGAAATCAATTGAGTGGAACAATACCTGAAAGCATTGGGCAACTGTCTAAGCTAAAGGTAATGGACTTGAGTATGAATGCTCTCGAAGGTGTGGTTTCGGAAAGCCACTTCTCGAATCTCTCTAGATTAACATTTTTGGATTTGTCCTCTACCTCACTAGCTTTAAGGTTCAATTCTAATTGGGCTCCACCTTTTCAATTGCACCATATATATTTGGGGTCTTCCAAGATGGGTCCCTATTTTCCAAAATGGCTTCAAACTCAGAATGAGTATTCATACCTTGATATTTCTGATGCTGGAATTGTGGATATCCTTCCAAGCTGGTTTTGGGGTACAACTCGTGACGTGACATTTATCAGTCTTTCCAATAACCAAATTGGAGAAATGTTTGCAAATTCGACAATGAATTTTACGTATTACCCTGAAATACATTTGAGTTCGAACCAAATCGAAGGTCCAATTCCCTCAACTCTATCGCATGCGTCATATTTGGATCGATCTAATAATAACATTTCAGGGTCAATTTCTATCTTGTGTGAAGCATACAGGAGTTTAATGTTTCTTAATCTCTCAAGCAACAATCTCTCTGGAGAGCTTCTAGAATGCTTGACACATTTTGACTATCTAGTCATGCTTGATTTGAGCTACAATGCTTTTTCGGGGAAAATTCCATCCACAGTAGGCTCACTATATCAAATGCAAACATTGAAATTAAGAAGCAACAGATTTATTGGAGAGTTACCTTCATCCTTCAAGAATTGCACCAGCTTAAAAGTTATTGATGTTGGATACAATGAATTATCAGGACCCATACCAAAATGGTTAGGGGTTAGCCTTCAGAAACTGGTTGTCCTGATGCTTTCCTCTAATAACTTCAACGGAAGCATGCCATCTGAACTATGCCATCTAACAAACATTCAAAACTTGGATGTGTCTGCAAATAACATCTCTGGAACAATACCAAAATGCCTCGGCAATTTTACTGTTTTGGCACATAAGGGAAACTCATCTCCGACCCTTCAACATTCGTACCTAAGAGATAATACTTTCTATGCGGTTAATTATATGGATGATGCAACATTTATATGGAAGGGAAGAATGTACTCGTACAAAAACACTTTGGGACTTGTAAAGAGAATTGATTTCTCGAGAAATAGGTTAATGGGGTGGATACCAATTGAAATCACGTATCTTGTTGGGTTAATTTCTTTAAACCTATCGAGAAACGGATTGACAGGTGAGTTACCTGCAAAGATTGGAAAGTTGCAAGAATTAGAGATCCTTGATTTGTCAAGAAACCAGATGGATGGCAGAATTCCAACAAGCCTTGCTCGGATAGATCGTCTTAGTGTCTTGGACTTGTCATACAACAATTTTATTGGCAAAATTCCAACAGGCACTCAGCTCCAAAGTTTTGATCCCTCCAATTATGCTGGAAATCCTCAACTGTGCGGACCTCCACTTCAAAACATGTGTGATGATCAACAGGAAACCGTGATCTCAAGCAATGAAGAAGAAAAGGATGAGCTGATAACATGGGGATTTTACGTCAGCATGGCGCTTGGTTTTATTGTTGGATTTTGGGGAGTCTGTGGCAGTCTGATTTTCATCAGGCAATGGAGATACTCGTACATTAGGTTCTTGAATGTCTTGAATGATTGGCTTTATGTGAGGGTGATTTCGATCAAGCGGCACTTCAATTAA

Protein Analysis

809

Amino Acids

90.73

Weight (kDa)

6.78

Isoelectric Point (pI)

39.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 30 - 143 1.9e-10 Leucine-rich repeat region
LRR_14 PF23598 194 - 337 4.5e-06 Leucine-rich repeat region
LRR_8 PF13855 234 - 294 4.5e-08 Leucine rich repeat
LRR_14 PF23598 409 - 557 8.3e-10 Leucine-rich repeat region
LRR_8 PF13855 642 - 700 3.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1349
Acc36I ACCTGC 1 cut(s) 1978
AciI CCGC 3 cut(s) 1778, 2175, 2413
AclI AACGTT 1 cut(s) 428
AclWI GGATC 5 cut(s) 357, 672, 1224, 1996, 2135
AcsI RAATTY 7 cut(s) 310, 487, 1117, 1129, 1389, 2037, 2109
AcuI CTGAAG 2 cut(s) 695, 1544
AcyI GRCGYC 1 cut(s) 10
AfaI GTAC 7 cut(s) 472, 640, 1057, 1754, 1826, 1832, 2354
AflIII ACRYGT 1 cut(s) 2193
AjiI CACGTC 1 cut(s) 1069
AjnI CCWGG 1 cut(s) 232
AluBI AGCT 9 cut(s) 406, 775, 884, 1044, 1318, 1368, 1491, 2128, 2251
AluI AGCT 9 cut(s) 406, 775, 884, 1044, 1318, 1368, 1491, 2128, 2251
Alw26I GTCTC 1 cut(s) 638
AlwI GGATC 5 cut(s) 357, 672, 1224, 1996, 2135
AlwNI CAGNNNCTG 1 cut(s) 1567
Ama87I CYCGRG 1 cut(s) 1870
ApeKI GCWGC 2 cut(s) 19, 106
ApoI RAATTY 7 cut(s) 310, 487, 1117, 1129, 1389, 2037, 2109
ArsI GACNNNNNNTTYG 2 cut(s) 1162, 1194
AspLEI GCGC 1 cut(s) 2284
AspS9I GGNCC 6 cut(s) 124, 150, 956, 1178, 1529, 2177
AsuC2I CCSGG 1 cut(s) 154
AsuHPI GGTGA 2 cut(s) 1973, 2410
AsuII TTCGAA 1 cut(s) 1163
AvaI CYCGRG 1 cut(s) 1870
AvaII GGWCC 6 cut(s) 124, 150, 956, 1178, 1529, 2177
BaeI ACNNNNGTAYC 2 cut(s) 1736, 1769
BanII GRGCYC 1 cut(s) 910
BauI CACGAG 1 cut(s) 1062
BbsI GAAGAC 2 cut(s) 437, 936
BbvI GCAGC 2 cut(s) 31, 118
BccI CCATC 7 cut(s) 143, 946, 1402, 1621, 1635, 2020, 2024
BciT130I CCWGG 1 cut(s) 234
BciVI GTATCC 2 cut(s) 1505, 1887
BclI TGATCA 1 cut(s) 2203
BcnI CCSGG 1 cut(s) 154
BcoDI GTCTC 1 cut(s) 638
BfaI CTAG 5 cut(s) 522, 846, 881, 1322, 1349
BfmI CTRYAG 1 cut(s) 17
BfoI RGCGCY 1 cut(s) 2285
BfuAI ACCTGC 1 cut(s) 1978
BfuI GTATCC 2 cut(s) 1505, 1887
BisI GCNGC 3 cut(s) 20, 107, 2414
BlsI GCNGC 3 cut(s) 21, 108, 2415
BmcAI AGTACT 1 cut(s) 472
Bme1390I CCNGG 2 cut(s) 154, 234
Bme18I GGWCC 6 cut(s) 124, 150, 956, 1178, 1529, 2177
BmeT110I CYCGRG 1 cut(s) 1870
BmgBI CACGTC 1 cut(s) 1069
BmgT120I GGNCC 6 cut(s) 124, 150, 956, 1178, 1529, 2177
BmiI GGNNCC 7 cut(s) 151, 152, 320, 909, 957, 958, 1531
BmrFI CCNGG 2 cut(s) 154, 234
BmrI ACTGGG 1 cut(s) 621
BmsI GCATC 3 cut(s) 1006, 1569, 1786
BmuI ACTGGG 1 cut(s) 621
BpiI GAAGAC 2 cut(s) 437, 936
BpmI CTGGAG 1 cut(s) 1332
Bpu14I TTCGAA 1 cut(s) 1163
BpuEI CTTGAG 4 cut(s) 119, 811, 1279, 2209
BpuMI CCSGG 1 cut(s) 154
Bsa29I ATCGAT 2 cut(s) 681, 1219
BsaAI YACGTR 2 cut(s) 1137, 1911
BsaBI GATNNNNATC 2 cut(s) 2330, 2405
BsaHI GRCGYC 1 cut(s) 10
BsaJI CCNNGG 1 cut(s) 1693
Bse1I ACTGG 5 cut(s) 389, 468, 619, 627, 1572
Bse3DI GCAATG 2 cut(s) 2236, 2345
Bse8I GATNNNNATC 2 cut(s) 2330, 2405
BseBI CCWGG 1 cut(s) 234
BseCI ATCGAT 2 cut(s) 681, 1219
BseDI CCNNGG 1 cut(s) 1693
BseGI GGATG 6 cut(s) 1394, 1469, 1657, 1798, 2035, 2251
BseJI GATNNNNATC 2 cut(s) 2330, 2405
BseMI GCAATG 2 cut(s) 2236, 2345
BseMII CTCAG 6 cut(s) 289, 344, 382, 610, 998, 2138
BseNI ACTGG 5 cut(s) 389, 468, 619, 627, 1572
BseXI GCAGC 2 cut(s) 31, 118
BshVI ATCGAT 2 cut(s) 681, 1219
BsiHKCI CYCGRG 1 cut(s) 1870
BsiSI CCGG 1 cut(s) 154
BslFI GGGAC 4 cut(s) 72, 163, 942, 1860
BsmAI GTCTC 1 cut(s) 638
BsmFI GGGAC 4 cut(s) 72, 163, 942, 1860
BsmI GAATGC 2 cut(s) 805, 1331
BsoBI CYCGRG 1 cut(s) 1870
Bsp119I TTCGAA 1 cut(s) 1163
Bsp1286I GDGCHC 1 cut(s) 910
BspACI CCGC 3 cut(s) 1778, 2175, 2413
BspCNI CTCAG 6 cut(s) 288, 345, 381, 609, 997, 2137
BspDI ATCGAT 2 cut(s) 681, 1219
BspHI TCATGA 1 cut(s) 379
BspLI GGNNCC 7 cut(s) 151, 152, 320, 909, 957, 958, 1531
BspMAI CTGCAG 1 cut(s) 21
BspMI ACCTGC 1 cut(s) 1978
BspPI GGATC 5 cut(s) 357, 672, 1224, 1996, 2135
BspT104I TTCGAA 1 cut(s) 1163
BsrDI GCAATG 2 cut(s) 2236, 2345
BsrI ACTGG 5 cut(s) 389, 468, 619, 627, 1572
BssECI CCNNGG 1 cut(s) 1693
BssNI GRCGYC 1 cut(s) 10
BssSI CACGAG 1 cut(s) 1062
Bst2BI CACGAG 1 cut(s) 1062
Bst2UI CCWGG 1 cut(s) 234
Bst4CI ACNGT 7 cut(s) 296, 397, 768, 1402, 1708, 2172, 2218
BstACI GRCGYC 1 cut(s) 10
BstAPI GCANNNNNTGC 1 cut(s) 531
BstBAI YACGTR 2 cut(s) 1137, 1911
BstBI TTCGAA 1 cut(s) 1163
BstC8I GCNNGC 4 cut(s) 404, 577, 1203, 1610
BstDEI CTNAG 9 cut(s) 275, 353, 368, 596, 771, 984, 1757, 2069, 2124
BstF5I GGATG 6 cut(s) 1394, 1469, 1657, 1798, 2035, 2251
BstH2I RGCGCY 1 cut(s) 2285
BstHHI GCGC 1 cut(s) 2284
BstMAI GTCTC 1 cut(s) 638
BstMWI GCNNNNNNNGC 2 cut(s) 16, 531
BstNI CCWGG 1 cut(s) 234
BstNSI RCATGY 3 cut(s) 1205, 1612, 2197
BstSCI CCNGG 2 cut(s) 152, 232
BstSFI CTRYAG 1 cut(s) 17
BstSNI TACGTA 1 cut(s) 1137
BstV1I GCAGC 2 cut(s) 31, 118
BstV2I GAAGAC 2 cut(s) 437, 936
BstX2I RGATCY 2 cut(s) 349, 2001
BstXI CCANNNNNNTGG 1 cut(s) 2030
BstYI RGATCY 2 cut(s) 349, 2001
Bsu15I ATCGAT 2 cut(s) 681, 1219
BsuI GTATCC 2 cut(s) 1505, 1887
BsuTUI ATCGAT 2 cut(s) 681, 1219
BtrI CACGTC 1 cut(s) 1069
BtsCI GGATG 6 cut(s) 1394, 1469, 1657, 1798, 2035, 2251
BtsI GCAGTG 1 cut(s) 14
BtsIMutI CAGTG 3 cut(s) 14, 283, 301
BveI ACCTGC 1 cut(s) 1978
Cac8I GCNNGC 4 cut(s) 404, 577, 1203, 1610
CaiI CAGNNNCTG 1 cut(s) 1567
CciI TCATGA 1 cut(s) 379
CfoI GCGC 1 cut(s) 2284
Cfr13I GGNCC 6 cut(s) 124, 150, 956, 1178, 1529, 2177
ClaI ATCGAT 2 cut(s) 681, 1219
CseI GACGC 1 cut(s) 1194
Csp6I GTAC 7 cut(s) 471, 639, 1056, 1753, 1825, 1831, 2353
CviQI GTAC 7 cut(s) 471, 639, 1056, 1753, 1825, 1831, 2353
DdeI CTNAG 9 cut(s) 275, 353, 368, 596, 771, 984, 1757, 2069, 2124
DraI TTTAAA 1 cut(s) 1935
DrdI GACNNNNNNGTC 1 cut(s) 1349
DseDI GACNNNNNNGTC 1 cut(s) 1349
Eco105I TACGTA 1 cut(s) 1137
Eco24I GRGCYC 1 cut(s) 910
Eco32I GATATC 1 cut(s) 1033
Eco47I GGWCC 6 cut(s) 124, 150, 956, 1178, 1529, 2177
Eco57I CTGAAG 2 cut(s) 695, 1544
Eco88I CYCGRG 1 cut(s) 1870
EcoO109I RGGNCCY 3 cut(s) 150, 956, 1529
EcoRI GAATTC 2 cut(s) 310, 2037
EcoRII CCWGG 1 cut(s) 232
EcoRV GATATC 1 cut(s) 1033
EcoT38I GRGCYC 1 cut(s) 910
FalI AAGNNNNNCTT 1 cut(s) 2402
FaqI GGGAC 4 cut(s) 72, 163, 942, 1860
FbaI TGATCA 1 cut(s) 2203
Fnu4HI GCNGC 3 cut(s) 20, 107, 2414
FokI GGATG 6 cut(s) 1381, 1456, 1664, 1805, 2042, 2258
FriOI GRGCYC 1 cut(s) 910
Fsp4HI GCNGC 3 cut(s) 20, 107, 2414
FspBI CTAG 5 cut(s) 522, 846, 881, 1322, 1349
GlaI GCGC 1 cut(s) 2283
GluI GCNGC 3 cut(s) 20, 107, 2414
GsuI CTGGAG 1 cut(s) 1332
HaeII RGCGCY 1 cut(s) 2285
HapII CCGG 1 cut(s) 154
HgaI GACGC 1 cut(s) 1194
HhaI GCGC 1 cut(s) 2284
Hin1I GRCGYC 1 cut(s) 10
Hin6I GCGC 1 cut(s) 2282
HinP1I GCGC 1 cut(s) 2282
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HinfI GANTC 3 cut(s) 85, 838, 2310
HpaII CCGG 1 cut(s) 154
HphI GGTGA 2 cut(s) 1973, 2410
Hpy166II GTNNAC 2 cut(s) 14, 514
Hpy8I GTNNAC 2 cut(s) 14, 514
HpyCH4III ACNGT 7 cut(s) 296, 397, 768, 1402, 1708, 2172, 2218
HpyCH4IV ACGT 5 cut(s) 428, 1068, 1136, 1910, 2271
HpyF10VI GCNNNNNNNGC 2 cut(s) 16, 531
HpyF3I CTNAG 9 cut(s) 275, 353, 368, 596, 771, 984, 1757, 2069, 2124
HpySE526I ACGT 5 cut(s) 428, 1068, 1136, 1910, 2271
Hsp92I GRCGYC 1 cut(s) 10
HspAI GCGC 1 cut(s) 2282
KflI GGGWCCC 2 cut(s) 150, 956
Ksp22I TGATCA 1 cut(s) 2203
LmnI GCTCC 4 cut(s) 324, 411, 913, 2133
Lsp1109I GCAGC 2 cut(s) 31, 118
LweI GCATC 3 cut(s) 1006, 1569, 1786
MaeI CTAG 5 cut(s) 522, 846, 881, 1322, 1349
MaeII ACGT 5 cut(s) 428, 1068, 1136, 1910, 2271
MaeIII GTNAC 7 cut(s) 38, 429, 599, 1064, 1069, 1461, 1965
MboII GAAGA 9 cut(s) 123, 324, 437, 483, 688, 936, 1830, 2246, 2249
MfeI CAATTG 3 cut(s) 731, 920, 1899
MflI RGATCY 2 cut(s) 349, 2001
MhlI GDGCHC 1 cut(s) 910
MlyI GAGTC 2 cut(s) 94, 2319
MmeI TCCRAC 6 cut(s) 223, 1489, 1760, 2066, 2138, 2278
MslI CAYNNNNRTG 2 cut(s) 378, 1807
MspI CCGG 1 cut(s) 154
MspR9I CCNGG 2 cut(s) 154, 234
MunI CAATTG 3 cut(s) 731, 920, 1899
Mva1269I GAATGC 2 cut(s) 805, 1331
MvaI CCWGG 1 cut(s) 234
MwoI GCNNNNNNNGC 2 cut(s) 16, 531
NciI CCSGG 1 cut(s) 154
NlaIV GGNNCC 7 cut(s) 151, 152, 320, 909, 957, 958, 1531
NmeAIII GCCGAG 1 cut(s) 1674
NmuCI GTSAC 2 cut(s) 1064, 1069
NspI RCATGY 3 cut(s) 1205, 1612, 2197
NspV TTCGAA 1 cut(s) 1163
PaeI GCATGC 2 cut(s) 1205, 1612
PaeR7I CTCGAG 1 cut(s) 1870
PagI TCATGA 1 cut(s) 379
PciI ACATGT 1 cut(s) 2193
PcsI WCGNNNNNNNCGW 1 cut(s) 2062
PctI GAATGC 2 cut(s) 805, 1331
PfeI GAWTC 1 cut(s) 838
PkrI GCNGC 3 cut(s) 21, 108, 2415
PleI GAGTC 2 cut(s) 93, 2318
PpsI GAGTC 2 cut(s) 93, 2318
Ppu21I YACGTR 2 cut(s) 1137, 1911
PpuMI RGGWCCY 3 cut(s) 150, 956, 1529
PscI ACATGT 1 cut(s) 2193
Psp1406I AACGTT 1 cut(s) 428
Psp5II RGGWCCY 3 cut(s) 150, 956, 1529
Psp6I CCWGG 1 cut(s) 232
PspGI CCWGG 1 cut(s) 232
PspN4I GGNNCC 7 cut(s) 151, 152, 320, 909, 957, 958, 1531
PspPI GGNCC 6 cut(s) 124, 150, 956, 1178, 1529, 2177
PspPPI RGGWCCY 3 cut(s) 150, 956, 1529
PsrI GAACNNNNNNTAC 2 cut(s) 2345, 2377
PstI CTGCAG 1 cut(s) 21
PstNI CAGNNNCTG 1 cut(s) 1567
PsuI RGATCY 2 cut(s) 349, 2001
RsaI GTAC 7 cut(s) 472, 640, 1057, 1754, 1826, 1832, 2354
RsaNI GTAC 7 cut(s) 471, 639, 1056, 1753, 1825, 1831, 2353
RseI CAYNNNNRTG 2 cut(s) 378, 1807
SatI GCNGC 3 cut(s) 20, 107, 2414
Sau96I GGNCC 6 cut(s) 124, 150, 956, 1178, 1529, 2177
ScaI AGTACT 1 cut(s) 472
SchI GAGTC 2 cut(s) 94, 2319
ScrFI CCNGG 2 cut(s) 154, 234
SduI GDGCHC 1 cut(s) 910
SfaNI GCATC 3 cut(s) 1006, 1569, 1786
SfcI CTRYAG 1 cut(s) 17
Sfr274I CTCGAG 1 cut(s) 1870
SfuI TTCGAA 1 cut(s) 1163
SinI GGWCC 6 cut(s) 124, 150, 956, 1178, 1529, 2177
SlaI CTCGAG 1 cut(s) 1870
SmiMI CAYNNNNRTG 2 cut(s) 378, 1807
SmlI CTYRAG 5 cut(s) 98, 790, 1294, 1870, 2224
SmoI CTYRAG 5 cut(s) 98, 790, 1294, 1870, 2224
SnaBI TACGTA 1 cut(s) 1137
SphI GCATGC 2 cut(s) 1205, 1612
SsiI CCGC 3 cut(s) 1778, 2175, 2413
SspI AATATT 1 cut(s) 119
SspMI CTAG 5 cut(s) 522, 846, 881, 1322, 1349
StyD4I CCNGG 2 cut(s) 152, 232
TaaI ACNGT 7 cut(s) 296, 397, 768, 1402, 1708, 2172, 2218
TaiI ACGT 5 cut(s) 431, 1071, 1139, 1913, 2274
TatI WGTACW 2 cut(s) 470, 1824
TauI GCSGC 1 cut(s) 2416
TfiI GAWTC 1 cut(s) 838
TscAI CASTG 3 cut(s) 21, 283, 301
TseFI GTSAC 2 cut(s) 1064, 1069
TseI GCWGC 2 cut(s) 19, 106
Tsp45I GTSAC 2 cut(s) 1064, 1069
TspGWI ACGGA 2 cut(s) 1617, 1965
TspRI CASTG 3 cut(s) 21, 283, 301
VpaK11BI GGWCC 6 cut(s) 124, 150, 956, 1178, 1529, 2177
XapI RAATTY 7 cut(s) 310, 487, 1117, 1129, 1389, 2037, 2109
XbaI TCTAGA 2 cut(s) 845, 1321
XceI RCATGY 3 cut(s) 1205, 1612, 2197
XcmI CCANNNNNNNNNTGG 1 cut(s) 1047
XhoI CTCGAG 1 cut(s) 1870
XspI CTAG 5 cut(s) 522, 846, 881, 1322, 1349
ZrmI AGTACT 1 cut(s) 472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.