RchiOBHm_Chr7g0207621

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
24908465 .. 24911581
3117 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18579

Sequence Viewer

Length: 3117 bp
ATGCCGATCAAGTTAGTCAATGAAGCAACTCCATTGCTGTTTCCACGATTATACATATGTAGTTTCCAAAATCCTTTTGCTTCAACTATATATACTTCACTTTGCAGGTGGCATATCATCTTCATAATCATGTTTTTCAGTATAATGAGTGGTGGGTCTATGCATTCTTGTTTGGTTGGGCTTGTGTGCCTGGCCATTGCCTCTGCTATTTGTTGTTCAACTGTTGGAAGCTCAAACAACATCATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCACTTCAAACAAGGCCTGGTGGATAAGTCCAATGCTCTTGCCTCTTGGAAAAGTGAGAAAGATTGCTGCAAGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTTACCAGCCTTGATTTCTCCTTTAATTATGATCCATATCTCTATTCTGCTGAAGTTCCTTTAAGTGGTGAAATTAGTCCTTCACTACTTGAATTGCGATATCTAAATTACTTGGACCTCAGTTATTTTGATTTTGGAGAAAATATGATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGCAGATGCTAATTTCAGCGGACCTGTTCCTCCCCAACTTAGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTATGAGTCAATTGAAAGAGCTCAAACTTGCAGATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTACCGTAACCAAGTTGTTAGTCCTGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACTTGAACATGTCATATCTAGATTTGTCAAAGGTTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTCGCTGACCGAGCTTCAGTTATCTTGGTGTGAGCTTCCCGATGTCAATCTAAGATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAACTCCTTGACCTCTCTGGGAACTTTCTTAATTCTTCAATATTTTATTGGATAGCCAATACCAGCAGCAACTTTGTCCATATTGGTCTCTCTTCCAACAATCTTAAAGGTCCTATCCCAGATGTCTTCACAAGCATGCTTTCTTTAGTAACACTAGATCTGTATGAGAATCAACTTGAAGGTGGGTTACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTAATGTCAAACCAATTGTCTGAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTAAGAACACACTTGATACCTTGGGCTTGAGTGATAACCAGTTTTGGGGGTCGTTGCCGGATTTGGCAAGTTTTTCAAAGTTAAGAGAGTTATATCTTTCCTTTAATCAACTAAATGGCTCTGTACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGAAACATTATATCTCTCCGGGAATTCTTTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTAAAGTATTTGAGTCTTTCTGGTAATTGTTTCTCTATCAACTTGAGCTCTGATTGGAATCCACCATTTCGACTTACTGATTGGTTAGACATGTCCTCTTGCAAGGTGGGCCCAGCTTTTCCCAAGTGGATTCTAACGCAGACAAATCTTACGACTCTTTATCTCTCTAATGCTGGACTATCAGGATCATTACCCATCAAGGTTTGGGATCTATTTTCTGGCTTATCTCAATTAGATCTCTCTATGAACCAAATCCATGGGAGACTACCGAATCTGTCATCGACAAGCTTGAGTTATGTTAACTTGTCTTCTAATCTATTTTCTGGCGCATTGCCCTCATTTTCTCCTATGCTCACGGAGTTGTATCTCTCGAATAACATGTTTTCTGAGCCGTTGTCTTCCTTCTGTGCAACCCAGGCTCCATATTTAACGCATCTTGACATTTCTAAGAACCTATTGTCTGGGGAGCTTCCTAATTGTTGGATGCAATTTCAAGAATTGCGAGTGTTGGATTTGGGAAAAAATAAATTATCTGGAAAAATACCAAGGTCGTTAGGCAATCTACAGGGAATTGCGGTATTGCGTTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCCGATTATTGATGGTTGACCTTGGCAACAATAACTTGTCGGGAAAGATACCAACATGGATTGGCCAAAGCCTAACAAACTTGGTGATTCTACGCTTACGGTCAAATGAGTTTAATAGAATCATACCCTTCTCCCTGTGCAATCTAGCTGCCATTCATGTTTTGGACCTCTCTTACAACAATATTTCAGGAGGCTTGCCACATTGCTTCAATAACATAACCGCTTTGGCAGATGATTCGGGAGTTTATAATGTTATTGTGGAACTTGTGTGGAAAGGAATAGAAATTGAGTTTCCCAATCTTATAGGTTTAAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGAAAATTCCGCCAAGTATAGCAACTATGACAGAGTTGATTTCTCTGAACCTGTCTAGAAACAAATTGATGGGAAATCTTCCTGAAGACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAATCAGATATCTGGTAAAATTCCTACAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCACACAACAACTTGTCAGGAAGAATTCCATCGGGCACCCAACTTCAGGGTTTTAATGCTTCTCAATATATGGGAAATCTTGGACTTTGTGGACCACCGTTGACACCAAGTTGTCCAGGAGACGGAACAGTTCAAGATGATGGAATCGCGAGAGGAACTAAAATTGATAACAAAGAACAGGTTAGTGATGGTCTCAACCTTGGATTCTTTATTAGTGTAGTGCTGGGATTTGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACTACTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATTTATGTTTATTCTCAAAAAAAAAAAAAAGATTGGATTTATGTCAAAACCAAGGCAAAAGTGCGGAGGACACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1038

Amino Acids

115.12

Weight (kDa)

6.1

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 85 - 123 7.5e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 152 - 361 1.1e-18 Leucine-rich repeat region
LRR_8 PF13855 367 - 422 1.7e-07 Leucine rich repeat
LRR_8 PF13855 439 - 497 5e-07 Leucine rich repeat
LRR_8 PF13855 825 - 884 2.7e-09 Leucine rich repeat
LRR_8 PF13855 868 - 908 6.5e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2415
AarI CACCTGC 1 cut(s) 96
AasI GACNNNNNNGTC 1 cut(s) 1252
Acc36I ACCTGC 1 cut(s) 96
AccB1I GGYRCC 1 cut(s) 2744
AccII CGCG 1 cut(s) 2858
AciI CCGC 6 cut(s) 597, 2108, 2388, 2522, 2964, 3097
AclWI GGATC 3 cut(s) 410, 1726, 1749
AcoI YGGCCR 3 cut(s) 192, 905, 2230
AcsI RAATTY 5 cut(s) 686, 1483, 2517, 2661, 2733
AcuI CTGAAG 4 cut(s) 456, 929, 2616, 2738
AfaI GTAC 2 cut(s) 1431, 2167
AfiI CCNNNNNNNGG 5 cut(s) 449, 764, 1351, 2755, 2831
AflII CTTAAG 1 cut(s) 2978
AflIII ACRYGT 3 cut(s) 870, 1623, 1911
AjnI CCWGG 5 cut(s) 189, 291, 1947, 2824, 3012
Alw21I GWGCWC 2 cut(s) 720, 1583
Alw26I GTCTC 4 cut(s) 1109, 1789, 2823, 2906
AlwI GGATC 3 cut(s) 410, 1726, 1749
Ama87I CYCGRG 1 cut(s) 1433
AoxI GGCC 5 cut(s) 192, 289, 905, 1642, 2230
ApaI GGGCCC 1 cut(s) 1646
ApeKI GCWGC 4 cut(s) 342, 1083, 1230, 2315
ApoI RAATTY 5 cut(s) 686, 1483, 2517, 2661, 2733
ArsI GACNNNNNNTTYG 2 cut(s) 1250, 1282
AseI ATTAAT 1 cut(s) 999
AspLEI GCGC 1 cut(s) 1862
AspS9I GGNCC 8 cut(s) 499, 599, 746, 1127, 1642, 1643, 2332, 2801
AsuC2I CCSGG 1 cut(s) 1480
AsuHPI GGTGA 2 cut(s) 464, 2263
AvaI CYCGRG 1 cut(s) 1433
AvaII GGWCC 6 cut(s) 499, 599, 746, 1127, 2332, 2801
BaeGI GKGCMC 2 cut(s) 1646, 2747
BalI TGGCCA 3 cut(s) 194, 907, 2232
BanI GGYRCC 1 cut(s) 2744
BanII GRGCYC 3 cut(s) 720, 1583, 1646
BarI GAAGNNNNNNTAC 2 cut(s) 1188, 1220
BbsI GAAGAC 4 cut(s) 1135, 1833, 1923, 2604
Bbv12I GWGCWC 2 cut(s) 720, 1583
BbvI GCAGC 4 cut(s) 329, 1095, 1242, 2302
BccI CCATC 7 cut(s) 1736, 2173, 2575, 2746, 2843, 2891, 2950
BceAI ACGGC 1 cut(s) 1909
BcgI CGANNNNNNTGC 2 cut(s) 2385, 2419
BciT130I CCWGG 5 cut(s) 191, 293, 1949, 2826, 3014
BcnI CCSGG 1 cut(s) 1480
BcoDI GTCTC 4 cut(s) 1109, 1789, 2823, 2906
BfaI CTAG 5 cut(s) 881, 1172, 1455, 2312, 2568
BfmI CTRYAG 1 cut(s) 2096
BfrI CTTAAG 1 cut(s) 2978
BfuAI ACCTGC 1 cut(s) 96
BglII AGATCT 2 cut(s) 1174, 1768
BisI GCNGC 5 cut(s) 343, 1084, 1231, 2316, 2965
BlsI GCNGC 5 cut(s) 344, 1085, 1232, 2317, 2966
Bme1390I CCNGG 6 cut(s) 191, 293, 1480, 1949, 2826, 3014
Bme18I GGWCC 6 cut(s) 499, 599, 746, 1127, 2332, 2801
BmeT110I CYCGRG 1 cut(s) 1433
BmgT120I GGNCC 8 cut(s) 499, 599, 746, 1127, 1642, 1643, 2332, 2801
BmiI GGNNCC 3 cut(s) 1644, 1953, 2746
BmrFI CCNGG 6 cut(s) 191, 293, 1480, 1949, 2826, 3014
BmsI GCATC 4 cut(s) 574, 721, 1975, 2007
BpiI GAAGAC 4 cut(s) 1135, 1833, 1923, 2604
BpuEI CTTGAG 5 cut(s) 851, 877, 1354, 1597, 1843
BpuMI CCSGG 1 cut(s) 1480
BsaBI GATNNNNATC 3 cut(s) 420, 975, 1590
BsaI GGTCTC 2 cut(s) 1109, 2906
BsaJI CCNNGG 7 cut(s) 1326, 1789, 1947, 2078, 2188, 2908, 3084
BsaXI ACNNNNNCTCC 2 cut(s) 1936, 1966
Bsc4I CCNNNNNNNGG 5 cut(s) 449, 764, 1351, 2755, 2831
Bse1I ACTGG 2 cut(s) 1345, 2950
Bse3DI GCAATG 4 cut(s) 32, 195, 1862, 2368
Bse8I GATNNNNATC 3 cut(s) 420, 975, 1590
BseBI CCWGG 5 cut(s) 191, 293, 1949, 2826, 3014
BseDI CCNNGG 7 cut(s) 1326, 1789, 1947, 2078, 2188, 2908, 3084
BseGI GGATG 2 cut(s) 2022, 2961
BseJI GATNNNNATC 3 cut(s) 420, 975, 1590
BseLI CCNNNNNNNGG 5 cut(s) 449, 764, 1351, 2755, 2831
BseMI GCAATG 4 cut(s) 32, 195, 1862, 2368
BseMII CTCAG 2 cut(s) 517, 1911
BseNI ACTGG 2 cut(s) 1345, 2950
BseSI GKGCMC 2 cut(s) 1646, 2747
BseXI GCAGC 4 cut(s) 329, 1095, 1242, 2302
BseYI CCCAGC 2 cut(s) 1645, 2932
Bsh1236I CGCG 1 cut(s) 2858
BshFI GGCC 5 cut(s) 194, 291, 907, 1644, 2232
BshNI GGYRCC 1 cut(s) 2744
BsiHKAI GWGCWC 2 cut(s) 720, 1583
BsiHKCI CYCGRG 1 cut(s) 1433
BsiSI CCGG 2 cut(s) 1364, 1479
BslI CCNNNNNNNGG 5 cut(s) 449, 764, 1351, 2755, 2831
BsmAI GTCTC 4 cut(s) 1109, 1789, 2823, 2906
BsmBI CGTCTC 1 cut(s) 2823
BsmI GAATGC 1 cut(s) 163
BsnI GGCC 5 cut(s) 194, 291, 907, 1644, 2232
Bso31I GGTCTC 2 cut(s) 1109, 2906
BsoBI CYCGRG 1 cut(s) 1433
Bsp120I GGGCCC 1 cut(s) 1642
Bsp1286I GDGCHC 4 cut(s) 720, 1583, 1646, 2747
Bsp143I GATC 9 cut(s) 6, 415, 646, 793, 983, 1174, 1718, 1741, 1768
Bsp19I CCATGG 1 cut(s) 1789
Bsp68I TCGCGA 1 cut(s) 2858
BspACI CCGC 6 cut(s) 597, 2108, 2388, 2522, 2964, 3097
BspANI GGCC 5 cut(s) 194, 291, 907, 1644, 2232
BspCNI CTCAG 2 cut(s) 516, 1912
BspFNI CGCG 1 cut(s) 2858
BspLI GGNNCC 3 cut(s) 1644, 1953, 2746
BspMI ACCTGC 1 cut(s) 96
BspPI GGATC 3 cut(s) 410, 1726, 1749
BspQI GCTCTTC 1 cut(s) 276
BspT107I GGYRCC 1 cut(s) 2744
BspTI CTTAAG 1 cut(s) 2978
BspTNI GGTCTC 2 cut(s) 1109, 2906
BsrDI GCAATG 4 cut(s) 32, 195, 1862, 2368
BsrI ACTGG 2 cut(s) 1345, 2950
BssECI CCNNGG 7 cut(s) 1326, 1789, 1947, 2078, 2188, 2908, 3084
BssMI GATC 9 cut(s) 6, 415, 646, 793, 983, 1174, 1718, 1741, 1768
BssT1I CCWWGG 6 cut(s) 1326, 1789, 2078, 2188, 2908, 3084
Bst2UI CCWGG 5 cut(s) 191, 293, 1949, 2826, 3014
Bst4CI ACNGT 6 cut(s) 223, 803, 2165, 2268, 2808, 2839
Bst6I CTCTTC 3 cut(s) 276, 1020, 1114
BstAFI CTTAAG 1 cut(s) 2978
BstC8I GCNNGC 6 cut(s) 267, 364, 923, 1154, 2363, 2680
BstDEI CTNAG 8 cut(s) 503, 617, 980, 1234, 1308, 1920, 1980, 2693
BstDSI CCRYGG 1 cut(s) 1789
BstEII GGTNACC 1 cut(s) 1203
BstF5I GGATG 2 cut(s) 2022, 2961
BstFNI CGCG 1 cut(s) 2858
BstHHI GCGC 1 cut(s) 1862
BstKTI GATC 9 cut(s) 9, 418, 649, 796, 986, 1177, 1721, 1744, 1771
BstMAI GTCTC 4 cut(s) 1109, 1789, 2823, 2906
BstMBI GATC 9 cut(s) 6, 415, 646, 793, 983, 1174, 1718, 1741, 1768
BstMWI GCNNNNNNNGC 4 cut(s) 931, 940, 1641, 1949
BstNI CCWGG 5 cut(s) 191, 293, 1949, 2826, 3014
BstNSI RCATGY 6 cut(s) 269, 366, 874, 1156, 1627, 1915
BstPI GGTNACC 1 cut(s) 1203
BstSCI CCNGG 6 cut(s) 189, 291, 1478, 1947, 2824, 3012
BstSFI CTRYAG 1 cut(s) 2096
BstSLI GKGCMC 2 cut(s) 1646, 2747
BstUI CGCG 1 cut(s) 2858
BstV1I GCAGC 4 cut(s) 329, 1095, 1242, 2302
BstV2I GAAGAC 4 cut(s) 1135, 1833, 1923, 2604
BstX2I RGATCY 3 cut(s) 1174, 1741, 1768
BstXI CCANNNNNNTGG 1 cut(s) 1790
BstYI RGATCY 3 cut(s) 1174, 1741, 1768
BsuRI GGCC 5 cut(s) 194, 291, 907, 1644, 2232
BtgI CCRYGG 1 cut(s) 1789
BtsCI GGATG 2 cut(s) 2022, 2961
BtsIMutI CAGTG 2 cut(s) 748, 2943
BtuMI TCGCGA 1 cut(s) 2858
BveI ACCTGC 1 cut(s) 96
Cac8I GCNNGC 6 cut(s) 267, 364, 923, 1154, 2363, 2680
CfoI GCGC 1 cut(s) 1862
Cfr13I GGNCC 8 cut(s) 499, 599, 746, 1127, 1642, 1643, 2332, 2801
Csp6I GTAC 2 cut(s) 1430, 2166
CviQI GTAC 2 cut(s) 1430, 2166
DdeI CTNAG 8 cut(s) 503, 617, 980, 1234, 1308, 1920, 1980, 2693
DpnI GATC 9 cut(s) 8, 417, 648, 795, 985, 1176, 1720, 1743, 1770
DpnII GATC 9 cut(s) 6, 415, 646, 793, 983, 1174, 1718, 1741, 1768
DraI TTTAAA 1 cut(s) 1536
DrdI GACNNNNNNGTC 1 cut(s) 1252
DseDI GACNNNNNNGTC 1 cut(s) 1252
EaeI YGGCCR 3 cut(s) 192, 905, 2230
Eam1104I CTCTTC 3 cut(s) 276, 1020, 1114
EarI CTCTTC 3 cut(s) 276, 1020, 1114
EciI GGCGGA 1 cut(s) 2511
Ecl136II GAGCTC 2 cut(s) 718, 1581
Eco130I CCWWGG 6 cut(s) 1326, 1789, 2078, 2188, 2908, 3084
Eco147I AGGCCT 1 cut(s) 291
Eco24I GRGCYC 3 cut(s) 720, 1583, 1646
Eco31I GGTCTC 2 cut(s) 1109, 2906
Eco32I GATATC 2 cut(s) 485, 2652
Eco47I GGWCC 6 cut(s) 499, 599, 746, 1127, 2332, 2801
Eco53kI GAGCTC 2 cut(s) 718, 1581
Eco57I CTGAAG 4 cut(s) 456, 929, 2616, 2738
Eco88I CYCGRG 1 cut(s) 1433
Eco91I GGTNACC 1 cut(s) 1203
EcoICRI GAGCTC 2 cut(s) 718, 1581
EcoO109I RGGNCCY 1 cut(s) 1127
EcoO65I GGTNACC 1 cut(s) 1203
EcoRI GAATTC 2 cut(s) 1483, 2733
EcoRII CCWGG 5 cut(s) 189, 291, 1947, 2824, 3012
EcoRV GATATC 2 cut(s) 485, 2652
EcoT14I CCWWGG 6 cut(s) 1326, 1789, 2078, 2188, 2908, 3084
EcoT22I ATGCAT 1 cut(s) 165
EcoT38I GRGCYC 3 cut(s) 720, 1583, 1646
ErhI CCWWGG 6 cut(s) 1326, 1789, 2078, 2188, 2908, 3084
Esp3I CGTCTC 1 cut(s) 2823
FauNDI CATATG 1 cut(s) 56
Fnu4HI GCNGC 5 cut(s) 343, 1084, 1231, 2316, 2965
FokI GGATG 2 cut(s) 2029, 2968
FriOI GRGCYC 3 cut(s) 720, 1583, 1646
Fsp4HI GCNGC 5 cut(s) 343, 1084, 1231, 2316, 2965
FspBI CTAG 5 cut(s) 881, 1172, 1455, 2312, 2568
GlaI GCGC 1 cut(s) 1861
GluI GCNGC 5 cut(s) 343, 1084, 1231, 2316, 2965
GsaI CCCAGC 2 cut(s) 1649, 2936
HaeIII GGCC 5 cut(s) 194, 291, 907, 1644, 2232
HapII CCGG 2 cut(s) 1364, 1479
HhaI GCGC 1 cut(s) 1862
Hin6I GCGC 1 cut(s) 1860
HinP1I GCGC 1 cut(s) 1860
HincII GTYRAC 4 cut(s) 1245, 1834, 2185, 2811
HindII GTYRAC 4 cut(s) 1245, 1834, 2185, 2811
HindIII AAGCTT 1 cut(s) 1819
HpaI GTTAAC 1 cut(s) 1834
HpaII CCGG 2 cut(s) 1364, 1479
HphI GGTGA 2 cut(s) 464, 2263
Hpy166II GTNNAC 8 cut(s) 746, 1245, 1834, 2120, 2185, 2801, 2811, 2972
Hpy188I TCNGA 6 cut(s) 1270, 1585, 1921, 2559, 2649, 3008
Hpy8I GTNNAC 8 cut(s) 746, 1245, 1834, 2120, 2185, 2801, 2811, 2972
HpyAV CCTTC 6 cut(s) 474, 662, 1190, 1945, 2160, 2305
HpyCH4III ACNGT 6 cut(s) 223, 803, 2165, 2268, 2808, 2839
HpyF10VI GCNNNNNNNGC 4 cut(s) 931, 940, 1641, 1949
HpyF3I CTNAG 8 cut(s) 503, 617, 980, 1234, 1308, 1920, 1980, 2693
HspAI GCGC 1 cut(s) 1860
KspAI GTTAAC 1 cut(s) 1834
Kzo9I GATC 9 cut(s) 6, 415, 646, 793, 983, 1174, 1718, 1741, 1768
LguI GCTCTTC 1 cut(s) 276
LmnI GCTCC 2 cut(s) 1957, 1999
Lsp1109I GCAGC 4 cut(s) 329, 1095, 1242, 2302
LweI GCATC 4 cut(s) 574, 721, 1975, 2007
MaeI CTAG 5 cut(s) 881, 1172, 1455, 2312, 2568
MaeIII GTNAC 6 cut(s) 385, 803, 1165, 1203, 2606, 2941
MalI GATC 9 cut(s) 8, 417, 648, 795, 985, 1176, 1720, 1743, 1770
MboI GATC 9 cut(s) 6, 415, 646, 793, 983, 1174, 1718, 1741, 1768
MfeI CAATTG 3 cut(s) 560, 707, 1262
MflI RGATCY 3 cut(s) 1174, 1741, 1768
MhlI GDGCHC 4 cut(s) 720, 1583, 1646, 2747
MlsI TGGCCA 3 cut(s) 194, 907, 2232
MluNI TGGCCA 3 cut(s) 194, 907, 2232
MlyI GAGTC 6 cut(s) 565, 712, 1247, 1277, 1555, 1681
MmeI TCCRAC 5 cut(s) 205, 1137, 1994, 2022, 2601
Mox20I TGGCCA 3 cut(s) 194, 907, 2232
Mph1103I ATGCAT 1 cut(s) 165
MscI TGGCCA 3 cut(s) 194, 907, 2232
MslI CAYNNNNRTG 3 cut(s) 128, 1151, 2615
Msp20I TGGCCA 3 cut(s) 194, 907, 2232
MspA1I CMGCKG 1 cut(s) 597
MspCI CTTAAG 1 cut(s) 2978
MspI CCGG 2 cut(s) 1364, 1479
MspR9I CCNGG 6 cut(s) 191, 293, 1480, 1949, 2826, 3014
MunI CAATTG 3 cut(s) 560, 707, 1262
Mva1269I GAATGC 1 cut(s) 163
MvaI CCWGG 5 cut(s) 191, 293, 1949, 2826, 3014
MvnI CGCG 1 cut(s) 2858
MwoI GCNNNNNNNGC 4 cut(s) 931, 940, 1641, 1949
NciI CCSGG 1 cut(s) 1480
NcoI CCATGG 1 cut(s) 1789
NdeI CATATG 1 cut(s) 56
NdeII GATC 9 cut(s) 6, 415, 646, 793, 983, 1174, 1718, 1741, 1768
NlaIV GGNNCC 3 cut(s) 1644, 1953, 2746
NmuCI GTSAC 1 cut(s) 2941
NruI TCGCGA 1 cut(s) 2858
NsiI ATGCAT 1 cut(s) 165
NspI RCATGY 6 cut(s) 269, 366, 874, 1156, 1627, 1915
PaeI GCATGC 3 cut(s) 269, 366, 1156
PaqCI CACCTGC 1 cut(s) 96
PceI AGGCCT 1 cut(s) 291
PciI ACATGT 3 cut(s) 870, 1623, 1911
PciSI GCTCTTC 1 cut(s) 276
PctI GAATGC 1 cut(s) 163
PfoI TCCNGGA 3 cut(s) 1478, 2824, 3012
PkrI GCNGC 5 cut(s) 344, 1085, 1232, 2317, 2966
PleI GAGTC 6 cut(s) 564, 711, 1246, 1277, 1554, 1681
PpsI GAGTC 6 cut(s) 564, 711, 1246, 1277, 1554, 1681
PpuMI RGGWCCY 1 cut(s) 1127
PscI ACATGT 3 cut(s) 870, 1623, 1911
PshBI ATTAAT 1 cut(s) 999
PsiI TTATAA 1 cut(s) 2415
Psp124BI GAGCTC 2 cut(s) 720, 1583
Psp5II RGGWCCY 1 cut(s) 1127
Psp6I CCWGG 5 cut(s) 189, 291, 1947, 2824, 3012
PspEI GGTNACC 1 cut(s) 1203
PspFI CCCAGC 2 cut(s) 1645, 2932
PspGI CCWGG 5 cut(s) 189, 291, 1947, 2824, 3012
PspN4I GGNNCC 3 cut(s) 1644, 1953, 2746
PspOMI GGGCCC 1 cut(s) 1642
PspPI GGNCC 8 cut(s) 499, 599, 746, 1127, 1642, 1643, 2332, 2801
PspPPI RGGWCCY 1 cut(s) 1127
PsuI RGATCY 3 cut(s) 1174, 1741, 1768
RruI TCGCGA 1 cut(s) 2858
RsaI GTAC 2 cut(s) 1431, 2167
RsaNI GTAC 2 cut(s) 1430, 2166
RseI CAYNNNNRTG 3 cut(s) 128, 1151, 2615
SacI GAGCTC 2 cut(s) 720, 1583
SapI GCTCTTC 1 cut(s) 276
SatI GCNGC 5 cut(s) 343, 1084, 1231, 2316, 2965
Sau3AI GATC 9 cut(s) 6, 415, 646, 793, 983, 1174, 1718, 1741, 1768
Sau96I GGNCC 8 cut(s) 499, 599, 746, 1127, 1642, 1643, 2332, 2801
SchI GAGTC 6 cut(s) 565, 712, 1247, 1277, 1555, 1681
ScrFI CCNGG 6 cut(s) 191, 293, 1480, 1949, 2826, 3014
SduI GDGCHC 4 cut(s) 720, 1583, 1646, 2747
SfaNI GCATC 4 cut(s) 574, 721, 1975, 2007
SfcI CTRYAG 1 cut(s) 2096
SinI GGWCC 6 cut(s) 499, 599, 746, 1127, 2332, 2801
SmiMI CAYNNNNRTG 3 cut(s) 128, 1151, 2615
SmlI CTYRAG 6 cut(s) 830, 856, 1333, 1576, 1822, 2978
SmoI CTYRAG 6 cut(s) 830, 856, 1333, 1576, 1822, 2978
SphI GCATGC 3 cut(s) 269, 366, 1156
SseBI AGGCCT 1 cut(s) 291
SsiI CCGC 6 cut(s) 597, 2108, 2388, 2522, 2964, 3097
SspI AATATT 2 cut(s) 1059, 2350
SspMI CTAG 5 cut(s) 881, 1172, 1455, 2312, 2568
SstI GAGCTC 2 cut(s) 720, 1583
StuI AGGCCT 1 cut(s) 291
StyD4I CCNGG 6 cut(s) 189, 291, 1478, 1947, 2824, 3012
StyI CCWWGG 6 cut(s) 1326, 1789, 2078, 2188, 2908, 3084
TaaI ACNGT 6 cut(s) 223, 803, 2165, 2268, 2808, 2839
TaqI TCGA 3 cut(s) 1603, 1814, 1904
TaqII GACCGA 1 cut(s) 953
TauI GCSGC 1 cut(s) 2967
TscAI CASTG 2 cut(s) 748, 2950
TseFI GTSAC 1 cut(s) 2941
TseI GCWGC 4 cut(s) 342, 1083, 1230, 2315
Tsp45I GTSAC 1 cut(s) 2941
TspDTI ATGAA 7 cut(s) 36, 112, 532, 679, 1793, 2312, 2627
TspGWI ACGGA 2 cut(s) 1904, 2847
TspRI CASTG 2 cut(s) 748, 2950
Vha464I CTTAAG 1 cut(s) 2978
VpaK11BI GGWCC 6 cut(s) 499, 599, 746, 1127, 2332, 2801
VspI ATTAAT 1 cut(s) 999
XapI RAATTY 5 cut(s) 686, 1483, 2517, 2661, 2733
XbaI TCTAGA 2 cut(s) 880, 2567
XceI RCATGY 6 cut(s) 269, 366, 874, 1156, 1627, 1915
XcmI CCANNNNNNNNNTGG 1 cut(s) 2326
XspI CTAG 5 cut(s) 881, 1172, 1455, 2312, 2568
Zsp2I ATGCAT 1 cut(s) 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.