Ras-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49300 AT1G49300 AT3G18820 |
| fragaria_vesca | FvH4_2g08630 FvH4_6g31570 |
| malus_domestica | MD05G1067800.v1.1 MD10G1077700.v1.1 MD15G1318800.v1.1 MD17G1193300.v1.1 |
| prunus_persica | Prupe.3G068700_v2.0.a1 Prupe.3G068700_v2.0.a1 Prupe.8G098400_v2.0.a1 |
| pyrus_communis | pycom05g05870 pycom09g12780 pycom10g06060 pycom17g19930 |
| rosa_chinensis | RchiOBHm_Chr2g0138641 RchiOBHm_Chr6g0263971 |
| rosa_laevigata | RLG00000014297 RLG00000019749 |
| rosa_multiflora | Rmu_ssc0000210.1_g000003 |
| rosa_roxburghii | Rroxscaffold_176G00431370 Rroxscaffold_2G00106040 Rroxscaffold_7G00203650 |
| rosa_rugosa | Rorug02G0351900 Rorug02G0351900 Rorug06G0007200 |
| rosa_samantha | Rh2AG401100 Rh2BG406300 Rh2CG387200 Rh2DG421400 |
| rosa_wichuraiana | Rw2G032610 Rw6G011060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 56 |
| AciI | CCGC | 1 cut(s) | 56 |
| AclWI | GGATC | 1 cut(s) | 263 |
| AcsI | RAATTY | 1 cut(s) | 242 |
| AcuI | CTGAAG | 1 cut(s) | 479 |
| AfaI | GTAC | 2 cut(s) | 38, 191 |
| AgsI | TTSAA | 2 cut(s) | 86, 140 |
| AjnI | CCWGG | 1 cut(s) | 359 |
| Alw26I | GTCTC | 1 cut(s) | 389 |
| AlwI | GGATC | 1 cut(s) | 263 |
| Ama87I | CYCGRG | 1 cut(s) | 272 |
| AoxI | GGCC | 2 cut(s) | 255, 357 |
| ApoI | RAATTY | 1 cut(s) | 242 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 135, 243 |
| AvaI | CYCGRG | 1 cut(s) | 272 |
| BccI | CCATC | 2 cut(s) | 271, 311 |
| BciT130I | CCWGG | 1 cut(s) | 361 |
| BciVI | GTATCC | 1 cut(s) | 109 |
| BcoDI | GTCTC | 1 cut(s) | 389 |
| BfuI | GTATCC | 1 cut(s) | 109 |
| Bme1390I | CCNGG | 1 cut(s) | 361 |
| BmeT110I | CYCGRG | 1 cut(s) | 272 |
| BmrFI | CCNGG | 1 cut(s) | 361 |
| BmsI | GCATC | 1 cut(s) | 418 |
| BpmI | CTGGAG | 1 cut(s) | 253 |
| BsaI | GGTCTC | 1 cut(s) | 389 |
| BsaJI | CCNNGG | 2 cut(s) | 69, 372 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 65, 95 |
| Bse1I | ACTGG | 2 cut(s) | 236, 258 |
| Bse3DI | GCAATG | 1 cut(s) | 101 |
| BseBI | CCWGG | 1 cut(s) | 361 |
| BseDI | CCNNGG | 2 cut(s) | 69, 372 |
| BseGI | GGATG | 2 cut(s) | 263, 430 |
| BseMI | GCAATG | 1 cut(s) | 101 |
| BseNI | ACTGG | 2 cut(s) | 236, 258 |
| BsgI | GTGCAG | 1 cut(s) | 189 |
| BshFI | GGCC | 2 cut(s) | 257, 359 |
| BsiHKCI | CYCGRG | 1 cut(s) | 272 |
| BsmAI | GTCTC | 1 cut(s) | 389 |
| BsnI | GGCC | 2 cut(s) | 257, 359 |
| Bso31I | GGTCTC | 1 cut(s) | 389 |
| BsoBI | CYCGRG | 1 cut(s) | 272 |
| Bsp143I | GATC | 1 cut(s) | 268 |
| BspACI | CCGC | 1 cut(s) | 56 |
| BspANI | GGCC | 2 cut(s) | 257, 359 |
| BspHI | TCATGA | 1 cut(s) | 204 |
| BspPI | GGATC | 1 cut(s) | 263 |
| BspTNI | GGTCTC | 1 cut(s) | 389 |
| BsrBI | CCGCTC | 1 cut(s) | 56 |
| BsrDI | GCAATG | 1 cut(s) | 101 |
| BsrI | ACTGG | 2 cut(s) | 236, 258 |
| BssECI | CCNNGG | 2 cut(s) | 69, 372 |
| BssMI | GATC | 1 cut(s) | 268 |
| BssT1I | CCWWGG | 2 cut(s) | 69, 372 |
| Bst2UI | CCWGG | 1 cut(s) | 361 |
| BstF5I | GGATG | 2 cut(s) | 263, 430 |
| BstKTI | GATC | 1 cut(s) | 271 |
| BstMAI | GTCTC | 1 cut(s) | 389 |
| BstMBI | GATC | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 365, 452 |
| BstNI | CCWGG | 1 cut(s) | 361 |
| BstSCI | CCNGG | 1 cut(s) | 359 |
| BsuI | GTATCC | 1 cut(s) | 109 |
| BsuRI | GGCC | 2 cut(s) | 257, 359 |
| BtsCI | GGATG | 2 cut(s) | 263, 430 |
| BtsIMutI | CAGTG | 1 cut(s) | 455 |
| CciI | TCATGA | 1 cut(s) | 204 |
| Csp6I | GTAC | 2 cut(s) | 37, 190 |
| CviAII | CATG | 1 cut(s) | 205 |
| CviJI | RGCY | 4 cut(s) | 155, 257, 359, 414 |
| CviKI_1 | RGCY | 4 cut(s) | 155, 257, 359, 414 |
| CviQI | GTAC | 2 cut(s) | 37, 190 |
| DpnI | GATC | 1 cut(s) | 270 |
| DpnII | GATC | 1 cut(s) | 268 |
| Eco130I | CCWWGG | 2 cut(s) | 69, 372 |
| Eco147I | AGGCCT | 1 cut(s) | 359 |
| Eco31I | GGTCTC | 1 cut(s) | 389 |
| Eco57I | CTGAAG | 1 cut(s) | 479 |
| Eco88I | CYCGRG | 1 cut(s) | 272 |
| EcoRII | CCWGG | 1 cut(s) | 359 |
| EcoT14I | CCWWGG | 2 cut(s) | 69, 372 |
| ErhI | CCWWGG | 2 cut(s) | 69, 372 |
| FaeI | CATG | 1 cut(s) | 208 |
| FaiI | YATR | 5 cut(s) | 12, 206, 383, 388, 443 |
| FatI | CATG | 1 cut(s) | 204 |
| FokI | GGATG | 2 cut(s) | 250, 437 |
| GsuI | CTGGAG | 1 cut(s) | 253 |
| HaeIII | GGCC | 2 cut(s) | 257, 359 |
| Hin1II | CATG | 1 cut(s) | 208 |
| HinfI | GANTC | 3 cut(s) | 4, 16, 250 |
| Hpy166II | GTNNAC | 2 cut(s) | 99, 190 |
| Hpy188I | TCNGA | 5 cut(s) | 53, 66, 249, 268, 343 |
| Hpy188III | TCNNGA | 2 cut(s) | 205, 272 |
| Hpy8I | GTNNAC | 2 cut(s) | 99, 190 |
| HpyAV | CCTTC | 3 cut(s) | 349, 404, 442 |
| HpyCH4IV | ACGT | 1 cut(s) | 420 |
| HpyCH4V | TGCA | 3 cut(s) | 106, 170, 404 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 365, 452 |
| HpySE526I | ACGT | 1 cut(s) | 420 |
| Hsp92II | CATG | 1 cut(s) | 208 |
| Kzo9I | GATC | 1 cut(s) | 268 |
| LmnI | GCTCC | 1 cut(s) | 53 |
| LpnPI | CCDG | 6 cut(s) | 108, 217, 239, 271, 346, 373 |
| LweI | GCATC | 1 cut(s) | 418 |
| MaeII | ACGT | 1 cut(s) | 420 |
| MalI | GATC | 1 cut(s) | 270 |
| MbiI | CCGCTC | 1 cut(s) | 56 |
| MboI | GATC | 1 cut(s) | 268 |
| MboII | GAAGA | 4 cut(s) | 98, 251, 472, 485 |
| MluCI | AATT | 1 cut(s) | 242 |
| MnlI | CCTC | 2 cut(s) | 67, 409 |
| MroXI | GAANNNNTTC | 2 cut(s) | 135, 243 |
| MseI | TTAA | 2 cut(s) | 225, 417 |
| MspR9I | CCNGG | 1 cut(s) | 361 |
| MvaI | CCWGG | 1 cut(s) | 361 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 365, 452 |
| NdeII | GATC | 1 cut(s) | 268 |
| NlaIII | CATG | 1 cut(s) | 208 |
| PagI | TCATGA | 1 cut(s) | 204 |
| PceI | AGGCCT | 1 cut(s) | 359 |
| PdmI | GAANNNNTTC | 2 cut(s) | 135, 243 |
| PfeI | GAWTC | 3 cut(s) | 4, 16, 250 |
| Psp6I | CCWGG | 1 cut(s) | 359 |
| PspGI | CCWGG | 1 cut(s) | 359 |
| RsaI | GTAC | 2 cut(s) | 38, 191 |
| RsaNI | GTAC | 2 cut(s) | 37, 190 |
| SaqAI | TTAA | 2 cut(s) | 225, 417 |
| Sau3AI | GATC | 1 cut(s) | 268 |
| ScrFI | CCNGG | 1 cut(s) | 361 |
| SetI | ASST | 6 cut(s) | 78, 95, 137, 401, 423, 472 |
| SfaNI | GCATC | 1 cut(s) | 418 |
| Sse9I | AATT | 1 cut(s) | 242 |
| SseBI | AGGCCT | 1 cut(s) | 359 |
| SsiI | CCGC | 1 cut(s) | 56 |
| StuI | AGGCCT | 1 cut(s) | 359 |
| StyD4I | CCNGG | 1 cut(s) | 359 |
| StyI | CCWWGG | 2 cut(s) | 69, 372 |
| TaiI | ACGT | 1 cut(s) | 423 |
| TaqI | TCGA | 1 cut(s) | 331 |
| TasI | AATT | 1 cut(s) | 242 |
| TatI | WGTACW | 1 cut(s) | 36 |
| TfiI | GAWTC | 3 cut(s) | 4, 16, 250 |
| Tru1I | TTAA | 2 cut(s) | 225, 417 |
| Tru9I | TTAA | 2 cut(s) | 225, 417 |
| TscAI | CASTG | 1 cut(s) | 462 |
| TspDTI | ATGAA | 3 cut(s) | 17, 221, 480 |
| TspRI | CASTG | 1 cut(s) | 462 |
| XapI | RAATTY | 1 cut(s) | 242 |
| XmnI | GAANNNNTTC | 2 cut(s) | 135, 243 |