No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom110g00030 |
| rosa_chinensis | RchiOBHm_Chr1g0322901 RchiOBHm_Chr2g0111751 RchiOBHm_Chr2g0164871 RchiOBHm_Chr5g0028331 RchiOBHm_Chr6g0258951 |
| rosa_multiflora | Rmu_sc0006010.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00030400 |
| rosa_rugosa | Rorug06G0249500 Rorug06G0249500 Rorug06G0249600 |
| rosa_samantha | Rh1BG244300 Rh2CG232400 Rh2CG295900 Rh2DG332800 Rh3AG253200 Rh3AG309200 Rh3AG310800 Rh3BG355500 Rh3CG342500 Rh4AG132400 Rh5AG356000 Rh5BG260900 Rh5BG263300 Rh5BG491200 Rh5CG515000 Rh5DG386200 Rh6BG167200 Rh6BG273500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 133 |
| AluBI | AGCT | 2 cut(s) | 74, 116 |
| AluI | AGCT | 2 cut(s) | 74, 116 |
| Alw26I | GTCTC | 1 cut(s) | 152 |
| ApeKI | GCWGC | 2 cut(s) | 74, 77 |
| BbvCI | CCTCAGC | 1 cut(s) | 112 |
| BbvI | GCAGC | 2 cut(s) | 61, 64 |
| BccI | CCATC | 1 cut(s) | 41 |
| BcoDI | GTCTC | 1 cut(s) | 152 |
| BfaI | CTAG | 1 cut(s) | 20 |
| BisI | GCNGC | 2 cut(s) | 75, 78 |
| BlpI | GCTNAGC | 1 cut(s) | 117 |
| BlsI | GCNGC | 2 cut(s) | 76, 79 |
| BmsI | GCATC | 1 cut(s) | 120 |
| Bpu10I | CCTNAGC | 2 cut(s) | 70, 112 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 117 |
| BseGI | GGATG | 1 cut(s) | 135 |
| BseMII | CTCAG | 2 cut(s) | 74, 126 |
| BseXI | GCAGC | 2 cut(s) | 61, 64 |
| BsmAI | GTCTC | 1 cut(s) | 152 |
| Bsp143I | GATC | 1 cut(s) | 101 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 117 |
| BspACI | CCGC | 1 cut(s) | 133 |
| BspCNI | CTCAG | 2 cut(s) | 73, 125 |
| BspHI | TCATGA | 1 cut(s) | 138 |
| BssMI | GATC | 1 cut(s) | 101 |
| Bst6I | CTCTTC | 1 cut(s) | 155 |
| BstDEI | CTNAG | 4 cut(s) | 60, 70, 112, 117 |
| BstF5I | GGATG | 1 cut(s) | 135 |
| BstKTI | GATC | 1 cut(s) | 104 |
| BstMAI | GTCTC | 1 cut(s) | 152 |
| BstMBI | GATC | 1 cut(s) | 101 |
| BstV1I | GCAGC | 2 cut(s) | 61, 64 |
| BtsCI | GGATG | 1 cut(s) | 135 |
| BtsI | GCAGTG | 1 cut(s) | 94 |
| BtsIMutI | CAGTG | 1 cut(s) | 94 |
| CciI | TCATGA | 1 cut(s) | 138 |
| CviAII | CATG | 1 cut(s) | 139 |
| CviJI | RGCY | 4 cut(s) | 64, 74, 116, 121 |
| CviKI_1 | RGCY | 4 cut(s) | 64, 74, 116, 121 |
| DdeI | CTNAG | 4 cut(s) | 60, 70, 112, 117 |
| DpnI | GATC | 1 cut(s) | 103 |
| DpnII | GATC | 1 cut(s) | 101 |
| DraI | TTTAAA | 1 cut(s) | 96 |
| Eam1104I | CTCTTC | 1 cut(s) | 155 |
| EarI | CTCTTC | 1 cut(s) | 155 |
| FaeI | CATG | 1 cut(s) | 142 |
| FaiI | YATR | 3 cut(s) | 140, 155, 157 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 76, 108 |
| FatI | CATG | 1 cut(s) | 138 |
| FauNDI | CATATG | 1 cut(s) | 155 |
| Fnu4HI | GCNGC | 2 cut(s) | 75, 78 |
| FokI | GGATG | 1 cut(s) | 142 |
| Fsp4HI | GCNGC | 2 cut(s) | 75, 78 |
| FspBI | CTAG | 1 cut(s) | 20 |
| GluI | GCNGC | 2 cut(s) | 75, 78 |
| Hin1II | CATG | 1 cut(s) | 142 |
| HinfI | GANTC | 1 cut(s) | 56 |
| Hpy188I | TCNGA | 1 cut(s) | 46 |
| Hpy188III | TCNNGA | 1 cut(s) | 139 |
| HpyAV | CCTTC | 1 cut(s) | 48 |
| HpyCH4V | TGCA | 1 cut(s) | 80 |
| HpyF3I | CTNAG | 4 cut(s) | 60, 70, 112, 117 |
| Hsp92II | CATG | 1 cut(s) | 142 |
| Kzo9I | GATC | 1 cut(s) | 101 |
| Lsp1109I | GCAGC | 2 cut(s) | 61, 64 |
| LweI | GCATC | 1 cut(s) | 120 |
| MaeI | CTAG | 1 cut(s) | 20 |
| MalI | GATC | 1 cut(s) | 103 |
| MboI | GATC | 1 cut(s) | 101 |
| MnlI | CCTC | 2 cut(s) | 121, 156 |
| MseI | TTAA | 2 cut(s) | 95, 125 |
| NdeI | CATATG | 1 cut(s) | 155 |
| NdeII | GATC | 1 cut(s) | 101 |
| NlaIII | CATG | 1 cut(s) | 142 |
| PagI | TCATGA | 1 cut(s) | 138 |
| PfeI | GAWTC | 1 cut(s) | 56 |
| PkrI | GCNGC | 2 cut(s) | 76, 79 |
| SaqAI | TTAA | 2 cut(s) | 95, 125 |
| SatI | GCNGC | 2 cut(s) | 75, 78 |
| Sau3AI | GATC | 1 cut(s) | 101 |
| SetI | ASST | 4 cut(s) | 71, 76, 118, 167 |
| SfaNI | GCATC | 1 cut(s) | 120 |
| SgeI | CNNG | 3 cut(s) | 32, 93, 151 |
| SsiI | CCGC | 1 cut(s) | 133 |
| SspMI | CTAG | 1 cut(s) | 20 |
| TfiI | GAWTC | 1 cut(s) | 56 |
| Tru1I | TTAA | 2 cut(s) | 95, 125 |
| Tru9I | TTAA | 2 cut(s) | 95, 125 |
| TscAI | CASTG | 1 cut(s) | 94 |
| TseI | GCWGC | 2 cut(s) | 74, 77 |
| TspDTI | ATGAA | 2 cut(s) | 30, 127 |
| TspRI | CASTG | 1 cut(s) | 94 |
| XspI | CTAG | 1 cut(s) | 20 |