No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g24810 FvH4_2g24820 FvH4_6g04120 |
| malus_domestica | MD03G1276800.v1.1 MD04G1216200.v1.1 MD04G1216300.v1.1 MD11G1298900.v1.1 |
| prunus_persica | Prupe.8G253200_v2.0.a1 Prupe.8G253200_v2.0.a1 |
| pyrus_communis | pycom04g19210 pycom04g19220 pycom11g26250 |
| rosa_chinensis | RchiOBHm_Chr3g0452671 RchiOBHm_Chr6g0292641 |
| rosa_laevigata | RLG00000012002 RLG00000012003 |
| rosa_roxburghii | Rroxscaffold_6G00429710 Rroxscaffold_7G00174830 |
| rosa_rugosa | Rorug02G0642600 Rorug02G0642700 Rorug06G0228700 |
| rosa_samantha | Rh3AG044800 Rh3BG047100 Rh3CG045600 Rh3DG046000 Rh6AG342000 Rh6BG349300 Rh6CG356200 |
| rosa_wichuraiana | Rw3G003500 Rw6G029800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 324 |
| AciI | CCGC | 9 cut(s) | 26, 44, 62, 95, 116, 134, 155, 173, 320 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 35, 53, 71, 86, 104, 143, 182, 305 |
| AjiI | CACGTC | 1 cut(s) | 326 |
| ApaI | GGGCCC | 2 cut(s) | 110, 149 |
| ApeKI | GCWGC | 1 cut(s) | 249 |
| AvaII | GGWCC | 8 cut(s) | 14, 41, 59, 92, 131, 170, 179, 317 |
| BaeGI | GKGCMC | 2 cut(s) | 110, 149 |
| BanII | GRGCYC | 2 cut(s) | 110, 149 |
| BbvI | GCAGC | 1 cut(s) | 236 |
| BfmI | CTRYAG | 1 cut(s) | 219 |
| BisI | GCNGC | 2 cut(s) | 26, 250 |
| BlsI | GCNGC | 2 cut(s) | 27, 251 |
| Bme18I | GGWCC | 8 cut(s) | 14, 41, 59, 92, 131, 170, 179, 317 |
| BmgBI | CACGTC | 1 cut(s) | 326 |
| BmiI | GGNNCC | 7 cut(s) | 107, 108, 124, 146, 147, 163, 298 |
| BmsI | GCATC | 1 cut(s) | 205 |
| BpmI | CTGGAG | 6 cut(s) | 30, 39, 57, 75, 108, 276 |
| BsaJI | CCNNGG | 5 cut(s) | 34, 52, 79, 85, 280 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 35, 53, 71, 86, 104, 143, 182, 305 |
| BseDI | CCNNGG | 5 cut(s) | 34, 52, 79, 85, 280 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 35, 53, 71, 86, 104, 143, 182, 305 |
| BseSI | GKGCMC | 2 cut(s) | 110, 149 |
| BseXI | GCAGC | 1 cut(s) | 236 |
| BseYI | CCCAGC | 1 cut(s) | 259 |
| BslFI | GGGAC | 1 cut(s) | 278 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 35, 53, 71, 86, 104, 143, 182, 305 |
| BsmFI | GGGAC | 1 cut(s) | 278 |
| Bsp120I | GGGCCC | 2 cut(s) | 106, 145 |
| Bsp1286I | GDGCHC | 2 cut(s) | 110, 149 |
| BspACI | CCGC | 9 cut(s) | 26, 44, 62, 95, 116, 134, 155, 173, 320 |
| BspLI | GGNNCC | 7 cut(s) | 107, 108, 124, 146, 147, 163, 298 |
| BssECI | CCNNGG | 5 cut(s) | 34, 52, 79, 85, 280 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 224, 276 |
| BstSFI | CTRYAG | 1 cut(s) | 219 |
| BstSLI | GKGCMC | 2 cut(s) | 110, 149 |
| BstV1I | GCAGC | 1 cut(s) | 236 |
| BtrI | CACGTC | 1 cut(s) | 326 |
| CsiI | ACCWGGT | 1 cut(s) | 190 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 324 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 324 |
| EciI | GGCGGA | 7 cut(s) | 33, 51, 84, 105, 123, 144, 162 |
| Eco24I | GRGCYC | 2 cut(s) | 110, 149 |
| Eco47I | GGWCC | 8 cut(s) | 14, 41, 59, 92, 131, 170, 179, 317 |
| EcoO109I | RGGNCCY | 7 cut(s) | 14, 106, 107, 145, 146, 287, 296 |
| EcoT38I | GRGCYC | 2 cut(s) | 110, 149 |
| FaiI | YATR | 1 cut(s) | 221 |
| FaqI | GGGAC | 1 cut(s) | 278 |
| Fnu4HI | GCNGC | 2 cut(s) | 26, 250 |
| FriOI | GRGCYC | 2 cut(s) | 110, 149 |
| Fsp4HI | GCNGC | 2 cut(s) | 26, 250 |
| GluI | GCNGC | 2 cut(s) | 26, 250 |
| GsaI | CCCAGC | 1 cut(s) | 263 |
| GsuI | CTGGAG | 6 cut(s) | 30, 39, 57, 75, 108, 276 |
| HpyCH4IV | ACGT | 1 cut(s) | 325 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 224, 276 |
| HpySE526I | ACGT | 1 cut(s) | 325 |
| LmnI | GCTCC | 2 cut(s) | 118, 157 |
| Lsp1109I | GCAGC | 1 cut(s) | 236 |
| LweI | GCATC | 1 cut(s) | 205 |
| MabI | ACCWGGT | 1 cut(s) | 190 |
| MaeII | ACGT | 1 cut(s) | 325 |
| MhlI | GDGCHC | 2 cut(s) | 110, 149 |
| MnlI | CCTC | 7 cut(s) | 5, 14, 32, 50, 83, 278, 300 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 224, 276 |
| NlaIV | GGNNCC | 7 cut(s) | 107, 108, 124, 146, 147, 163, 298 |
| PkrI | GCNGC | 2 cut(s) | 27, 251 |
| PpuMI | RGGWCCY | 1 cut(s) | 14 |
| Psp5II | RGGWCCY | 1 cut(s) | 14 |
| PspFI | CCCAGC | 1 cut(s) | 259 |
| PspN4I | GGNNCC | 7 cut(s) | 107, 108, 124, 146, 147, 163, 298 |
| PspOMI | GGGCCC | 2 cut(s) | 106, 145 |
| PspPPI | RGGWCCY | 1 cut(s) | 14 |
| SatI | GCNGC | 2 cut(s) | 26, 250 |
| SduI | GDGCHC | 2 cut(s) | 110, 149 |
| SexAI | ACCWGGT | 1 cut(s) | 190 |
| SfaNI | GCATC | 1 cut(s) | 205 |
| SfcI | CTRYAG | 1 cut(s) | 219 |
| SinI | GGWCC | 8 cut(s) | 14, 41, 59, 92, 131, 170, 179, 317 |
| SsiI | CCGC | 9 cut(s) | 26, 44, 62, 95, 116, 134, 155, 173, 320 |
| TaiI | ACGT | 1 cut(s) | 328 |
| TauI | GCSGC | 1 cut(s) | 28 |
| TseI | GCWGC | 1 cut(s) | 249 |
| TspGWI | ACGGA | 1 cut(s) | 318 |
| VpaK11BI | GGWCC | 8 cut(s) | 14, 41, 59, 92, 131, 170, 179, 317 |