No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g24810 FvH4_2g24820 FvH4_6g04120 |
| malus_domestica | MD03G1276800.v1.1 MD04G1216200.v1.1 MD04G1216300.v1.1 MD11G1298900.v1.1 |
| prunus_persica | Prupe.8G253200_v2.0.a1 Prupe.8G253200_v2.0.a1 |
| pyrus_communis | pycom04g19210 pycom04g19220 pycom11g26250 |
| rosa_chinensis | RchiOBHm_Chr3g0452671 RchiOBHm_Chr6g0292641 |
| rosa_laevigata | RLG00000012002 RLG00000012003 |
| rosa_roxburghii | Rroxscaffold_6G00429710 Rroxscaffold_7G00174830 |
| rosa_rugosa | Rorug02G0642600 Rorug02G0642700 Rorug06G0228700 |
| rosa_samantha | Rh3AG044800 Rh3BG047100 Rh3CG045600 Rh3DG046000 Rh6AG342000 Rh6BG349300 Rh6CG356200 |
| rosa_wichuraiana | Rw3G003500 Rw6G029800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 384 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 95, 113, 128, 146, 176, 194, 224, 242, 365 |
| AjiI | CACGTC | 1 cut(s) | 386 |
| Alw26I | GTCTC | 1 cut(s) | 49 |
| ApaI | GGGCCC | 2 cut(s) | 152, 200 |
| ApeKI | GCWGC | 2 cut(s) | 5, 309 |
| AspLEI | GCGC | 1 cut(s) | 26 |
| AsuC2I | CCSGG | 1 cut(s) | 252 |
| AvaII | GGWCC | 9 cut(s) | 65, 101, 134, 164, 182, 212, 230, 239, 377 |
| AxyI | CCTNAGG | 1 cut(s) | 364 |
| BaeGI | GKGCMC | 2 cut(s) | 152, 200 |
| BanII | GRGCYC | 2 cut(s) | 152, 200 |
| BbvI | GCAGC | 1 cut(s) | 296 |
| BcnI | CCSGG | 1 cut(s) | 252 |
| BcoDI | GTCTC | 1 cut(s) | 49 |
| BfmI | CTRYAG | 1 cut(s) | 279 |
| BfoI | RGCGCY | 1 cut(s) | 27 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 82 |
| BisI | GCNGC | 3 cut(s) | 6, 86, 310 |
| BlsI | GCNGC | 3 cut(s) | 7, 87, 311 |
| Bme18I | GGWCC | 9 cut(s) | 65, 101, 134, 164, 182, 212, 230, 239, 377 |
| BmgBI | CACGTC | 1 cut(s) | 386 |
| BmiI | GGNNCC | 5 cut(s) | 149, 150, 197, 198, 358 |
| BmsI | GCATC | 1 cut(s) | 265 |
| BpmI | CTGGAG | 7 cut(s) | 81, 90, 99, 117, 150, 198, 246 |
| BpuMI | CCSGG | 1 cut(s) | 252 |
| BsaI | GGTCTC | 1 cut(s) | 49 |
| BsaJI | CCNNGG | 6 cut(s) | 94, 121, 127, 175, 223, 340 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 95, 113, 128, 146, 176, 194, 224, 242, 365 |
| Bse21I | CCTNAGG | 1 cut(s) | 364 |
| BseDI | CCNNGG | 6 cut(s) | 94, 121, 127, 175, 223, 340 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 95, 113, 128, 146, 176, 194, 224, 242, 365 |
| BseSI | GKGCMC | 2 cut(s) | 152, 200 |
| BseXI | GCAGC | 1 cut(s) | 296 |
| BseYI | CCCAGC | 1 cut(s) | 319 |
| BsiSI | CCGG | 1 cut(s) | 252 |
| BslFI | GGGAC | 1 cut(s) | 338 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 95, 113, 128, 146, 176, 194, 224, 242, 365 |
| BsmAI | GTCTC | 1 cut(s) | 49 |
| BsmFI | GGGAC | 1 cut(s) | 338 |
| Bso31I | GGTCTC | 1 cut(s) | 49 |
| Bsp120I | GGGCCC | 2 cut(s) | 148, 196 |
| Bsp1286I | GDGCHC | 2 cut(s) | 152, 200 |
| BspLI | GGNNCC | 5 cut(s) | 149, 150, 197, 198, 358 |
| BspTNI | GGTCTC | 1 cut(s) | 49 |
| BssECI | CCNNGG | 6 cut(s) | 94, 121, 127, 175, 223, 340 |
| BstDEI | CTNAG | 1 cut(s) | 364 |
| BstH2I | RGCGCY | 1 cut(s) | 27 |
| BstHHI | GCGC | 1 cut(s) | 26 |
| BstMAI | GTCTC | 1 cut(s) | 49 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 82, 166, 214, 284, 336 |
| BstSFI | CTRYAG | 1 cut(s) | 279 |
| BstSLI | GKGCMC | 2 cut(s) | 152, 200 |
| BstV1I | GCAGC | 1 cut(s) | 296 |
| Bsu36I | CCTNAGG | 1 cut(s) | 364 |
| BtrI | CACGTC | 1 cut(s) | 386 |
| CfoI | GCGC | 1 cut(s) | 26 |
| DdeI | CTNAG | 1 cut(s) | 364 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 384 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 384 |
| EciI | GGCGGA | 8 cut(s) | 93, 126, 147, 156, 174, 195, 204, 222 |
| Eco24I | GRGCYC | 2 cut(s) | 152, 200 |
| Eco31I | GGTCTC | 1 cut(s) | 49 |
| Eco47I | GGWCC | 9 cut(s) | 65, 101, 134, 164, 182, 212, 230, 239, 377 |
| Eco81I | CCTNAGG | 1 cut(s) | 364 |
| EcoO109I | RGGNCCY | 7 cut(s) | 65, 74, 148, 149, 196, 197, 347 |
| EcoT38I | GRGCYC | 2 cut(s) | 152, 200 |
| FaiI | YATR | 2 cut(s) | 281, 391 |
| FaqI | GGGAC | 1 cut(s) | 338 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 86, 310 |
| FriOI | GRGCYC | 2 cut(s) | 152, 200 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 86, 310 |
| GlaI | GCGC | 1 cut(s) | 25 |
| GluI | GCNGC | 3 cut(s) | 6, 86, 310 |
| GsaI | CCCAGC | 1 cut(s) | 323 |
| GsuI | CTGGAG | 7 cut(s) | 81, 90, 99, 117, 150, 198, 246 |
| HaeII | RGCGCY | 1 cut(s) | 27 |
| HapII | CCGG | 1 cut(s) | 252 |
| HhaI | GCGC | 1 cut(s) | 26 |
| Hin6I | GCGC | 1 cut(s) | 24 |
| HinP1I | GCGC | 1 cut(s) | 24 |
| HpaII | CCGG | 1 cut(s) | 252 |
| Hpy188III | TCNNGA | 1 cut(s) | 30 |
| Hpy99I | CGWCG | 1 cut(s) | 49 |
| HpyAV | CCTTC | 1 cut(s) | 14 |
| HpyCH4IV | ACGT | 1 cut(s) | 385 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 82, 166, 214, 284, 336 |
| HpyF3I | CTNAG | 1 cut(s) | 364 |
| HpySE526I | ACGT | 1 cut(s) | 385 |
| HspAI | GCGC | 1 cut(s) | 24 |
| LmnI | GCTCC | 2 cut(s) | 160, 208 |
| Lsp1109I | GCAGC | 1 cut(s) | 296 |
| LweI | GCATC | 1 cut(s) | 265 |
| MaeII | ACGT | 1 cut(s) | 385 |
| MboII | GAAGA | 1 cut(s) | 292 |
| MhlI | GDGCHC | 2 cut(s) | 152, 200 |
| MnlI | CCTC | 9 cut(s) | 56, 65, 74, 92, 125, 173, 221, 338, 360 |
| MspI | CCGG | 1 cut(s) | 252 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 82, 166, 214, 284, 336 |
| NciI | CCSGG | 1 cut(s) | 252 |
| NlaIV | GGNNCC | 5 cut(s) | 149, 150, 197, 198, 358 |
| PkrI | GCNGC | 3 cut(s) | 7, 87, 311 |
| PpuMI | RGGWCCY | 1 cut(s) | 65 |
| Psp5II | RGGWCCY | 1 cut(s) | 65 |
| PspFI | CCCAGC | 1 cut(s) | 319 |
| PspN4I | GGNNCC | 5 cut(s) | 149, 150, 197, 198, 358 |
| PspOMI | GGGCCC | 2 cut(s) | 148, 196 |
| PspPPI | RGGWCCY | 1 cut(s) | 65 |
| SatI | GCNGC | 3 cut(s) | 6, 86, 310 |
| SduI | GDGCHC | 2 cut(s) | 152, 200 |
| SfaNI | GCATC | 1 cut(s) | 265 |
| SfcI | CTRYAG | 1 cut(s) | 279 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 82 |
| SinI | GGWCC | 9 cut(s) | 65, 101, 134, 164, 182, 212, 230, 239, 377 |
| TaiI | ACGT | 1 cut(s) | 388 |
| TauI | GCSGC | 1 cut(s) | 88 |
| TseI | GCWGC | 2 cut(s) | 5, 309 |
| VpaK11BI | GGWCC | 9 cut(s) | 65, 101, 134, 164, 182, 212, 230, 239, 377 |