Rh3CG050500

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0005538
Physical Location & Seq
Forward (+)
3428306 .. 3432880
4575 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG050500.1

Sequence Viewer

Length: 3285 bp
ATGGAGAAGACGACTGTGGATTCGAAGCTGAAAGAATACGAGACCATTTTCCGCAAAAAGTTCGAGACATTTCAATCCCAGGCGGCCTCCCTCGTCCACCTGACCAAGCAATACAAGGAGCTCCAGGCCCGGTTCGACTCCGCCCAGAACGACCTCCGGACCCGGTTCCGGGAGCTCAAGGACCGGGAGAACCAAATCGGACTCAAAGAGAAGGAGGCCGAACAATCGAGTAAGAGCCAATTGCTTTCCTTGAAATCTTTGATTAAGAAACACGTTGATGAGCTTGATGTGTTGAGCGAGAGGATTAGGGAGAAGAAGGAGGTGTGTGAGGTGACCGAAAGCCGGGTTTCGGAGAGGAAGAAGGAGTTGAGTTGGGTTGAGAGATGTGTGTTTGACAAGAGGAGAGAGGTTGAGGAGTGTAAGAGAGAGTGTGATCATCTGAAACAAAGGTGCATTGATGAGTGTGAGAAAGAGATGGAATTGAAAAGGGAGATGGATTTGAGAGCGAAAGAGTCAATGGAGGAGTGGCGTTGTAGGCTTGAATTGAAAGAGAGGGAGCTACAAGGGTTGTTTGACAAGTTTGAATTGAGAGGGCAAGAGTTTGACCCAAATGTCGAGGAGATTCGTGTTATTGATAAGAGGGTGGAGGAGTGCATCAATGAGGTTGAGATTAAAGAGAGGTGTTTGGAGAGGCTTGAGAAATCAATAGAGGAACGAGAAAAGTCTGTGGATTTAGTCTCCCATGAACTGAAGATGAAAGAGGGGGAACTTGAAGAGAAGGCCAAAGAGTTTGAGTTGTTTGCTTCTCAAGTGAAGACTGAGCAGTTGGAAAAAGAAAAGCATTTTGCTTCACTTGAAACATCGATGGAAGAACGAGAGAAGAGAATGGATGCACTTGAAGAATCGATACAAGAGCGCAAAAAGTCTTTGGATTCAGTCTCATATGAACTGAAGATGAAGGAGGGGAAACTTGAAGAGAAGGCTAGAGAGTTTGAATTGTTTGCTTCTCAAGTGAAGAATGAGCAGTTACAAAAAGAAAAGCATTTTGCTTCAGTTGAAAAATCGATGAAAGAACGAGGAAAGAACTTGGATGCACTTGAGAAATCAATAGAGGAACGAGAAAAGTCTGTGGATTCAGTCTCCCATGAACTGAAGATGAAAGAGGGGCAACTTGATGAGCAAGCCAAAGAGTTTGAAATTTTTGCTTCTCAAGTGAAGACTGAGCAGTTGGAAAAAGAAAAGCATTTTGCTTCAGTTGAAAAATTGATGGACGAACGAGGAAAGAACTTAGATGCACTTGAAAAATCGATACAAAAGCGCGAAAGGTATTTGGGTTTAGTTTCCCATGAACTGAAGATGAAAGAGGGGAAACTTGAAGAGAAGGCTAAGGAGTTTGAATTGTTTGCTTCTCAAGTGAAGACTGAGCAGCTGGAAAAAGAAAAGCACTTTGCTTCACTTGAAAAATCTATGGAAGAACGAGAGAAGACCTTGGATGCACTTGAAAAATCGATACAAGAGCGCAAAAAGTCTTTGGATTCAGTCTCATATGAACTGAAGATGAAGGAGGGGAAACTTGAAGAGAAGGCTAAAGAGTTTGAAATGTTTGCTTCTCAAGTGAAGACTGAGCAGTTGGAAAGAGCAGAGCATTTTGCTTCCCTTGAAAAATCGATGGAAGAACGAGAGAAGACAATAGATGCACTTGAAAAATCGATACAAGAGCGTGAAAAGTCTTTGGATTCAGTCTCATATGAACTGAAGATGAAAGAGGGGAAACTCGAAGAGAAGGCCAAAGAGTTTGAAATGTTTGCTTCTCAGGTGAAGACTGAGCAGTTGGAAAAAGAAAAGCATTTTGCTTCAGTTGAAAAATCGATGGACGAACGAGGAAAGAACTTAGATGCACTTGAAAAATCGATACAAGAGCGTGAAAGGTATTTGGGTTTAGTTTCCCATGAACTGAAGATGAAAGAGGGGAAACTTGAAGAGAAGGCTAAGGAGTTTGAATTGTTTGCTTCTCAAGTGAAGACTGAGCAGCTGGAAAAAGAAAAGCACTTTGCTTCACTTGAAAAATCTATGGAAGAACGAGAGAAGACCTTGGATGCACTTGAAAAATCGATACAAGAGCGCGAAAAGTCTTTGGATTCAGTCTCCCATGAACTGAAGATGAAAGAGGGGCAGCTTGAAGAGCAAGCCAAAGAGTTTAAACTGAAGCAGATTGCATTTGCTTCTCAAGTGAAGACTGAGAAGTTGGAAAGAGAAGAGCATTTTGCTTCACTTGAAAAATCGATCCAAGAAAGAGAAAAGACTTTGAATTCACTCAAGAAGTCGTTCCAAGAGAGCAAAGAGCATTTGGAGAGACAACTTGAAGAGCAGGGCAGAGAGCTTCCATCAAAGCAAAAATTATTCGATTCTCAGCAAGTGGAAAGAGAAAAGCAACATGATAAATTTGAAAAGTCCTTGGGAGAACGCAAAAAGCAGTTCAATGTATTCCAAAAGTCGGTTCAGGAGCAGAAAGAGCATTTGGATTCACTCTCCCATAGACTCCAGATGGAAAATAGGCAACTTGAAAAGCAGGGCAAAGAGCTTGAATTGAAGCTAAAACACCATGAATCTCAAGCGAAGGCTGACCAGTTGGCACTTACTCCCACTGCTAATAATATGATTATTCCATTTATAAGTGATCAACCCAGCATCAGTACAGATGGTAGAAGCTTGCAGTTGTTAATTGCTGAGAATTTAAACAAAGCTGAATTGGTGGGTGGCGAATTATCAGCTCTTTTAGATGCGGATGAGATTTTAAAGCTTCTTGGAATGATTTCTCAGCATAAGCAGACTTTACAGTTATGTCAGACACTTGGTTTTGAAGATAAAATCCCTGATATTATTTGGAATCTCATTGAAAGAAAGCAACTGATTGAGGCTGTTAGATTTATCTGCACCTTCAAGCTAAATGACGAGTTTCCCCCAGCACCACTCTTGATAGAATTTGTGGAGGATGCAAAGAAGTGTTGCAGTGAAATGCTCAGTGAAGTGAAATCATATGATGAAAAGGAAAAGTTTGTGGATGACCGAATAGCTGATCTAAGAGCTGTGGTTCAATGCATTGAAGACCACGGCCTCGAGTCCCAATACCACTTAATCGACATTTTGATGGATATTCAAGGTCTTCAGAGACTAAAGGAGAATGGAAAATTGGTGCTGTCTCTTCCACCCAGTGTTGAAAAACAAAAGCAGAGAAAAGGGAGGAAACAAAGTTCCAGCACATATCAGCTGCGTAAAAGAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

1094

Amino Acids

129.09

Weight (kDa)

5.6

Isoelectric Point (pI)

40.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 924 - 1062 2.9e-33 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2672
AasI GACNNNNNNGTC 1 cut(s) 611
AccII CGCG 2 cut(s) 1320, 2124
AccIII TCCGGA 1 cut(s) 156
AciI CCGC 4 cut(s) 52, 83, 141, 2783
AclWI GGATC 1 cut(s) 2278
AcsI RAATTY 5 cut(s) 1197, 2308, 2441, 2731, 2981
AdeI CACNNNGTG 1 cut(s) 3212
AfaI GTAC 1 cut(s) 2695
AfiI CCNNNNNNNGG 5 cut(s) 168, 169, 342, 349, 2494
AflIII ACRYGT 1 cut(s) 271
AjnI CCWGG 2 cut(s) 78, 123
AjuI GAANNNNNNNTTGG 6 cut(s) 2481, 2501, 2513, 2533, 3173, 3205
AloI GAACNNNNNNTCC 2 cut(s) 3235, 3267
Alw21I GWGCWC 2 cut(s) 123, 177
AlwI GGATC 1 cut(s) 2278
Ama87I CYCGRG 1 cut(s) 3116
Aor13HI TCCGGA 1 cut(s) 156
AoxI GGCC 6 cut(s) 84, 126, 216, 780, 1785, 3112
ApeKI GCWGC 4 cut(s) 1426, 2029, 2173, 3268
ApoI RAATTY 5 cut(s) 1197, 2308, 2441, 2731, 2981
ArsI GACNNNNNNTTYG 1 cut(s) 36
Asp700I GAANNNNTTC 2 cut(s) 2324, 2812
AspLEI GCGC 4 cut(s) 918, 1320, 1521, 2124
AspS9I GGNCC 3 cut(s) 127, 159, 181
AsuC2I CCSGG 5 cut(s) 130, 163, 170, 185, 344
AsuHPI GGTGA 2 cut(s) 343, 1828
AsuII TTCGAA 1 cut(s) 23
AvaI CYCGRG 1 cut(s) 3116
AvaII GGWCC 2 cut(s) 159, 181
BanII GRGCYC 2 cut(s) 123, 177
BarI GAAGNNNNNNTAC 2 cut(s) 891, 923
Bbv12I GWGCWC 2 cut(s) 123, 177
BbvI GCAGC 4 cut(s) 1438, 2041, 2185, 3255
BceAI ACGGC 1 cut(s) 3127
BcgI CGANNNNNNTGC 2 cut(s) 43, 77
BciT130I CCWGG 2 cut(s) 80, 125
BclI TGATCA 2 cut(s) 433, 2677
BcnI CCSGG 5 cut(s) 130, 163, 170, 185, 344
BfaI CTAG 1 cut(s) 984
BisI GCNGC 5 cut(s) 84, 1427, 2030, 2174, 3269
BlsI GCNGC 5 cut(s) 85, 1428, 2031, 2175, 3270
Bme1390I CCNGG 7 cut(s) 80, 125, 130, 163, 170, 185, 344
Bme18I GGWCC 2 cut(s) 159, 181
BmeT110I CYCGRG 1 cut(s) 3116
BmgT120I GGNCC 3 cut(s) 127, 159, 181
BmiI GGNNCC 2 cut(s) 161, 167
BmrFI CCNGG 7 cut(s) 80, 125, 130, 163, 170, 185, 344
BmrI ACTGGG 1 cut(s) 3204
BmuI ACTGGG 1 cut(s) 3204
BpmI CTGGAG 2 cut(s) 107, 2525
Bpu10I CCTNAGC 2 cut(s) 1386, 1989
Bpu14I TTCGAA 1 cut(s) 23
BpuMI CCSGG 5 cut(s) 130, 163, 170, 185, 344
BsaI GGTCTC 1 cut(s) 35
BsaJI CCNNGG 5 cut(s) 78, 1488, 2091, 2454, 3109
BsaWI WCCGGW 1 cut(s) 156
Bsc4I CCNNNNNNNGG 5 cut(s) 168, 169, 342, 349, 2494
Bse1I ACTGG 2 cut(s) 2626, 3210
BseAI TCCGGA 1 cut(s) 156
BseBI CCWGG 2 cut(s) 80, 125
BseDI CCNNGG 5 cut(s) 78, 1488, 2091, 2454, 3109
BseGI GGATG 7 cut(s) 895, 1096, 1498, 2101, 2791, 2998, 3067
BseLI CCNNNNNNNGG 5 cut(s) 168, 169, 342, 349, 2494
BseNI ACTGG 2 cut(s) 2626, 3210
BseRI GAGGAG 5 cut(s) 415, 428, 536, 632, 662
BseXI GCAGC 4 cut(s) 1438, 2041, 2185, 3255
BseYI CCCAGC 2 cut(s) 2684, 2962
BsgI GTGCAG 1 cut(s) 2917
Bsh1236I CGCG 2 cut(s) 1320, 2124
BshFI GGCC 6 cut(s) 86, 128, 218, 782, 1787, 3114
BsiHKAI GWGCWC 2 cut(s) 123, 177
BsiHKCI CYCGRG 1 cut(s) 3116
BsiSI CCGG 6 cut(s) 130, 157, 163, 169, 184, 343
BslFI GGGAC 1 cut(s) 3106
BslI CCNNNNNNNGG 5 cut(s) 168, 169, 342, 349, 2494
BsmFI GGGAC 1 cut(s) 3106
BsnI GGCC 6 cut(s) 86, 128, 218, 782, 1787, 3114
Bso31I GGTCTC 1 cut(s) 35
BsoBI CYCGRG 1 cut(s) 3116
Bsp119I TTCGAA 1 cut(s) 23
Bsp1286I GDGCHC 2 cut(s) 123, 177
Bsp13I TCCGGA 1 cut(s) 156
Bsp143I GATC 4 cut(s) 433, 2283, 2677, 3076
BspACI CCGC 4 cut(s) 52, 83, 141, 2783
BspANI GGCC 6 cut(s) 86, 128, 218, 782, 1787, 3114
BspEI TCCGGA 1 cut(s) 156
BspFNI CGCG 2 cut(s) 1320, 2124
BspLI GGNNCC 2 cut(s) 161, 167
BspPI GGATC 1 cut(s) 2278
BspQI GCTCTTC 3 cut(s) 2175, 2250, 2358
BspT104I TTCGAA 1 cut(s) 23
BspTNI GGTCTC 1 cut(s) 35
BsrI ACTGG 2 cut(s) 2626, 3210
BssECI CCNNGG 5 cut(s) 78, 1488, 2091, 2454, 3109
BssMI GATC 4 cut(s) 433, 2283, 2677, 3076
BssT1I CCWWGG 3 cut(s) 1488, 2091, 2454
Bst2UI CCWGG 2 cut(s) 80, 125
Bst4CI ACNGT 2 cut(s) 16, 2838
BstBI TTCGAA 1 cut(s) 23
BstC8I GCNNGC 3 cut(s) 1182, 2187, 2711
BstDSI CCRYGG 1 cut(s) 3109
BstEII GGTNACC 1 cut(s) 331
BstF5I GGATG 7 cut(s) 895, 1096, 1498, 2101, 2791, 2998, 3067
BstFNI CGCG 2 cut(s) 1320, 2124
BstHHI GCGC 4 cut(s) 918, 1320, 1521, 2124
BstKTI GATC 4 cut(s) 436, 2286, 2680, 3079
BstMBI GATC 4 cut(s) 433, 2283, 2677, 3076
BstMWI GCNNNNNNNGC 3 cut(s) 535, 2182, 2512
BstNI CCWGG 2 cut(s) 80, 125
BstPI GGTNACC 1 cut(s) 331
BstSCI CCNGG 7 cut(s) 78, 123, 128, 161, 168, 183, 342
BstUI CGCG 2 cut(s) 1320, 2124
BstV1I GCAGC 4 cut(s) 1438, 2041, 2185, 3255
BsuRI GGCC 6 cut(s) 86, 128, 218, 782, 1787, 3114
BtgI CCRYGG 1 cut(s) 3109
BtsCI GGATG 7 cut(s) 895, 1096, 1498, 2101, 2791, 2998, 3067
BtsI GCAGTG 2 cut(s) 2643, 3016
BtsIMutI CAGTG 4 cut(s) 2643, 3016, 3028, 3217
Cac8I GCNNGC 3 cut(s) 1182, 2187, 2711
CfoI GCGC 4 cut(s) 918, 1320, 1521, 2124
Cfr13I GGNCC 3 cut(s) 127, 159, 181
Csp6I GTAC 1 cut(s) 2694
CviAII CATG 7 cut(s) 743, 1145, 1346, 1949, 2150, 2435, 2603
CviQI GTAC 1 cut(s) 2694
DpnI GATC 4 cut(s) 435, 2285, 2679, 3078
DpnII GATC 4 cut(s) 433, 2283, 2677, 3076
DraI TTTAAA 3 cut(s) 2200, 2736, 2796
DraIII CACNNNGTG 1 cut(s) 3212
DrdI GACNNNNNNGTC 1 cut(s) 611
DseDI GACNNNNNNGTC 1 cut(s) 611
EciI GGCGGA 1 cut(s) 130
Ecl136II GAGCTC 2 cut(s) 121, 175
Eco130I CCWWGG 3 cut(s) 1488, 2091, 2454
Eco24I GRGCYC 2 cut(s) 123, 177
Eco31I GGTCTC 1 cut(s) 35
Eco47I GGWCC 2 cut(s) 159, 181
Eco53kI GAGCTC 2 cut(s) 121, 175
Eco88I CYCGRG 1 cut(s) 3116
Eco91I GGTNACC 1 cut(s) 331
EcoICRI GAGCTC 2 cut(s) 121, 175
EcoO65I GGTNACC 1 cut(s) 331
EcoRI GAATTC 1 cut(s) 2308
EcoRII CCWGG 2 cut(s) 78, 123
EcoT14I CCWWGG 3 cut(s) 1488, 2091, 2454
EcoT22I ATGCAT 1 cut(s) 3101
EcoT38I GRGCYC 2 cut(s) 123, 177
ErhI CCWWGG 3 cut(s) 1488, 2091, 2454
FaeI CATG 7 cut(s) 746, 1148, 1349, 1952, 2153, 2438, 2606
FaqI GGGAC 1 cut(s) 3106
FatI CATG 7 cut(s) 742, 1144, 1345, 1948, 2149, 2434, 2602
FauNDI CATATG 4 cut(s) 943, 1546, 1747, 3037
FbaI TGATCA 2 cut(s) 433, 2677
Fnu4HI GCNGC 5 cut(s) 84, 1427, 2030, 2174, 3269
FokI GGATG 7 cut(s) 902, 1103, 1505, 2108, 2798, 3005, 3074
FriOI GRGCYC 2 cut(s) 123, 177
Fsp4HI GCNGC 5 cut(s) 84, 1427, 2030, 2174, 3269
FspBI CTAG 1 cut(s) 984
GlaI GCGC 4 cut(s) 917, 1319, 1520, 2123
GluI GCNGC 5 cut(s) 84, 1427, 2030, 2174, 3269
GsaI CCCAGC 2 cut(s) 2688, 2966
GsuI CTGGAG 2 cut(s) 107, 2525
HaeIII GGCC 6 cut(s) 86, 128, 218, 782, 1787, 3114
HapII CCGG 6 cut(s) 130, 157, 163, 169, 184, 343
HhaI GCGC 4 cut(s) 918, 1320, 1521, 2124
Hin1II CATG 7 cut(s) 746, 1148, 1349, 1952, 2153, 2438, 2606
Hin6I GCGC 4 cut(s) 916, 1318, 1519, 2122
HinP1I GCGC 4 cut(s) 916, 1318, 1519, 2122
HindIII AAGCTT 2 cut(s) 2707, 2798
HpaII CCGG 6 cut(s) 130, 157, 163, 169, 184, 343
HphI GGTGA 2 cut(s) 343, 1828
Hpy166II GTNNAC 1 cut(s) 97
Hpy188I TCNGA 5 cut(s) 200, 352, 441, 2847, 3168
Hpy188III TCNNGA 6 cut(s) 64, 157, 2317, 2501, 2542, 2974
Hpy8I GTNNAC 1 cut(s) 97
HpyCH4III ACNGT 2 cut(s) 16, 2838
HpyCH4IV ACGT 1 cut(s) 273
HpyF10VI GCNNNNNNNGC 3 cut(s) 535, 2182, 2512
HpySE526I ACGT 1 cut(s) 273
Hsp92II CATG 7 cut(s) 746, 1148, 1349, 1952, 2153, 2438, 2606
HspAI GCGC 4 cut(s) 916, 1318, 1519, 2122
Kpn2I TCCGGA 1 cut(s) 156
Ksp22I TGATCA 2 cut(s) 433, 2677
Kzo9I GATC 4 cut(s) 433, 2283, 2677, 3076
LguI GCTCTTC 3 cut(s) 2175, 2250, 2358
LmnI GCTCC 5 cut(s) 118, 126, 172, 556, 2503
Lsp1109I GCAGC 4 cut(s) 1438, 2041, 2185, 3255
MaeI CTAG 1 cut(s) 984
MaeII ACGT 1 cut(s) 273
MaeIII GTNAC 2 cut(s) 331, 1026
MalI GATC 4 cut(s) 435, 2285, 2679, 3078
MboI GATC 4 cut(s) 433, 2283, 2677, 3076
MfeI CAATTG 1 cut(s) 239
MhlI GDGCHC 2 cut(s) 123, 177
MlyI GAGTC 5 cut(s) 131, 195, 521, 2532, 3128
MmeI TCCRAC 5 cut(s) 807, 1209, 1611, 1812, 2226
Mph1103I ATGCAT 1 cut(s) 3101
MroI TCCGGA 1 cut(s) 156
MroXI GAANNNNTTC 2 cut(s) 2324, 2812
MseI TTAA 7 cut(s) 264, 672, 2199, 2720, 2735, 2795, 3134
MslI CAYNNNNRTG 2 cut(s) 276, 3146
MspA1I CMGCKG 3 cut(s) 1429, 2032, 3268
MspI CCGG 6 cut(s) 130, 157, 163, 169, 184, 343
MspR9I CCNGG 7 cut(s) 80, 125, 130, 163, 170, 185, 344
MssI GTTTAAAC 1 cut(s) 2200
MunI CAATTG 1 cut(s) 239
MvaI CCWGG 2 cut(s) 80, 125
MvnI CGCG 2 cut(s) 1320, 2124
MwoI GCNNNNNNNGC 3 cut(s) 535, 2182, 2512
NciI CCSGG 5 cut(s) 130, 163, 170, 185, 344
NdeI CATATG 4 cut(s) 943, 1546, 1747, 3037
NdeII GATC 4 cut(s) 433, 2283, 2677, 3076
NlaIII CATG 7 cut(s) 746, 1148, 1349, 1952, 2153, 2438, 2606
NlaIV GGNNCC 2 cut(s) 161, 167
NmuCI GTSAC 1 cut(s) 331
NsiI ATGCAT 1 cut(s) 3101
NspV TTCGAA 1 cut(s) 23
PaeR7I CTCGAG 1 cut(s) 3116
PciSI GCTCTTC 3 cut(s) 2175, 2250, 2358
PdmI GAANNNNTTC 2 cut(s) 2324, 2812
PfoI TCCNGGA 1 cut(s) 168
PkrI GCNGC 5 cut(s) 85, 1428, 2031, 2175, 3270
PleI GAGTC 5 cut(s) 131, 195, 520, 2532, 3127
PmeI GTTTAAAC 1 cut(s) 2200
PpsI GAGTC 5 cut(s) 131, 195, 520, 2532, 3127
PsiI TTATAA 1 cut(s) 2672
Psp124BI GAGCTC 2 cut(s) 123, 177
Psp6I CCWGG 2 cut(s) 78, 123
PspEI GGTNACC 1 cut(s) 331
PspFI CCCAGC 2 cut(s) 2684, 2962
PspGI CCWGG 2 cut(s) 78, 123
PspN4I GGNNCC 2 cut(s) 161, 167
PspPI GGNCC 3 cut(s) 127, 159, 181
PspXI VCTCGAGB 1 cut(s) 3116
PvuII CAGCTG 3 cut(s) 1429, 2032, 3268
RsaI GTAC 1 cut(s) 2695
RsaNI GTAC 1 cut(s) 2694
RseI CAYNNNNRTG 2 cut(s) 276, 3146
SacI GAGCTC 2 cut(s) 123, 177
SapI GCTCTTC 3 cut(s) 2175, 2250, 2358
SaqAI TTAA 7 cut(s) 264, 672, 2199, 2720, 2735, 2795, 3134
SatI GCNGC 5 cut(s) 84, 1427, 2030, 2174, 3269
Sau3AI GATC 4 cut(s) 433, 2283, 2677, 3076
Sau96I GGNCC 3 cut(s) 127, 159, 181
SchI GAGTC 5 cut(s) 131, 195, 521, 2532, 3128
ScrFI CCNGG 7 cut(s) 80, 125, 130, 163, 170, 185, 344
SduI GDGCHC 2 cut(s) 123, 177
Sfr274I CTCGAG 1 cut(s) 3116
SfuI TTCGAA 1 cut(s) 23
SinI GGWCC 2 cut(s) 159, 181
SlaI CTCGAG 1 cut(s) 3116
SmiMI CAYNNNNRTG 2 cut(s) 276, 3146
SsiI CCGC 4 cut(s) 52, 83, 141, 2783
SspMI CTAG 1 cut(s) 984
SstI GAGCTC 2 cut(s) 123, 177
StyD4I CCNGG 7 cut(s) 78, 123, 128, 161, 168, 183, 342
StyI CCWWGG 3 cut(s) 1488, 2091, 2454
TaaI ACNGT 2 cut(s) 16, 2838
TaiI ACGT 1 cut(s) 276
TaqII GACCGA 2 cut(s) 350, 3081
TatI WGTACW 1 cut(s) 2693
TauI GCSGC 1 cut(s) 86
Tru1I TTAA 7 cut(s) 264, 672, 2199, 2720, 2735, 2795, 3134
Tru9I TTAA 7 cut(s) 264, 672, 2199, 2720, 2735, 2795, 3134
TscAI CASTG 4 cut(s) 2650, 3016, 3028, 3217
TseFI GTSAC 1 cut(s) 331
TseI GCWGC 4 cut(s) 1426, 2029, 2173, 3268
Tsp45I GTSAC 1 cut(s) 331
TspRI CASTG 4 cut(s) 2650, 3016, 3028, 3217
VpaK11BI GGWCC 2 cut(s) 159, 181
XapI RAATTY 5 cut(s) 1197, 2308, 2441, 2731, 2981
XhoI CTCGAG 1 cut(s) 3116
XmnI GAANNNNTTC 2 cut(s) 2324, 2812
XspI CTAG 1 cut(s) 984
Zsp2I ATGCAT 1 cut(s) 3101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.