Rorug02G0250200

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000126
Physical Location & Seq
Reverse (-)
26051754 .. 26053983
2230 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0250200.1

Sequence Viewer

Length: 1188 bp
ATGGCAAACTACTCTAGAAGCCTTTTTGTTCTCTCACTTGTCCTTGTCTTCATGAATGTCAACTTAGCCTTAGGCGCAACTGCTTCAGTCACTTACACTGTGACAAGTCTGGGAGCGAATCCTGATGGCAAGACCGACTCAACCAAAGCATTCCTCTCTGCATGGGCCAAAGCTTGTGTCTCCGCCAAGCCTGCTGTCATTTATGTCCCGGTGGGGAGGTTCTTGCTTCGCAAATCGGTCTTCAACGGGCCATGCAATAGCGCCATCACATTTCAAATTGCCGGCACACTCGTTGCCCCATCAGATTACTGGGTGATAGGAAATGCCGGTAACTGGCTTTTCTTTGAGCATGTGAATGGGGTTACCATCTCCGGTGGTATTCTTGACGGACAAGGCACTGGATTGTGGGACTGCAAGGCCTCCGGCAAGGGTTGCCCCAAAGGAGCGACTACACTTGGTTTTTCCAATTCGAACAACATTGTGATGAATGGAGTGTCATCCCTAAACAGCCAAATGTTTCACATAGTGATCAACGGCTGCCACAACGTGAAAATGCTAGGTGTTAGGGTTTCTGCCTCTGGCAACAGCCCCAACACAGATGGCATTCACGTTCAAATGTCTACCAGTGTCACTATTCTCAACTCCAAAATTGCCACGGGAGATGATTGTGTTTCAATTGGCCCCGGCACCAGTAATTTGTGGATTGAAAACGTTGCATGTGGTCCTGGGCATGGAATTAGCATTGGGAGTTTAGGCAAGGAGCAAGAGGAAGTGGGAGTGCAAAACGTAACAATTAAAACAGTTACATTCACCGGTACTCAGAATGGGGTGAGGATCAAGTCATGGGGTAGACCCAGTACTGGGTTTGCCAGGAACATTATTTTTCAACATGCTGTAATGGTCAATGTCAAAAATCCTATTGTTATTGATCAAAATTACTGCCCAGACGAAAAGCATTGCCCTGGTCAGGAGTCTGGAGTTCAAATTAGCGACATTATGTACCAAGACATTCACGGCACATCAGCAGCAGAAGTTGCCGTGAAATTCGATTGCAGCTCCAAATATCCTTGTAACAAAATCACATTGGAGGATGTTAAGCTCACTTACAAGAACCAAGCTGCTGAAGCTTCTTGTAGCCATGCAGGTGGAACGGCTGAGGGTACGGTTCAACCTACAAGTTGTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

395

Amino Acids

41.55

Weight (kDa)

7.92

Isoelectric Point (pI)

27.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pect-lyase_RHGA_epim PF12708 34 - 283 7e-12 Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28 PF00295 59 - 379 4.9e-88 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1133
Acc36I ACCTGC 1 cut(s) 1133
AccB1I GGYRCC 1 cut(s) 686
AccI GTMKAC 2 cut(s) 620, 850
AciI CCGC 1 cut(s) 183
AclI AACGTT 1 cut(s) 711
AclWI GGATC 1 cut(s) 842
AcsI RAATTY 1 cut(s) 1043
AcuI CTGAAG 2 cut(s) 69, 1143
AdeI CACNNNGTG 2 cut(s) 526, 547
AfaI GTAC 4 cut(s) 817, 859, 1001, 1162
AfiI CCNNNNNNNGG 5 cut(s) 333, 731, 860, 861, 967
AgeI ACCGGT 1 cut(s) 812
AgsI TTSAA 8 cut(s) 244, 275, 614, 675, 707, 887, 983, 1169
AjnI CCWGG 3 cut(s) 724, 869, 961
AluBI AGCT 5 cut(s) 173, 1056, 1099, 1118, 1127
AluI AGCT 5 cut(s) 173, 1056, 1099, 1118, 1127
Alw26I GTCTC 1 cut(s) 184
AlwI GGATC 1 cut(s) 842
AoxI GGCC 4 cut(s) 165, 248, 417, 679
ApeKI GCWGC 4 cut(s) 537, 1025, 1053, 1118
ApoI RAATTY 1 cut(s) 1043
ArsI GACNNNNNNTTYG 2 cut(s) 162, 194
AsiGI ACCGGT 1 cut(s) 812
AspLEI GCGC 2 cut(s) 77, 263
AspS9I GGNCC 4 cut(s) 165, 248, 680, 722
AsuC2I CCSGG 2 cut(s) 209, 684
AsuHPI GGTGA 3 cut(s) 325, 802, 841
AsuII TTCGAA 1 cut(s) 470
AvaII GGWCC 1 cut(s) 722
AxyI CCTNAGG 1 cut(s) 70
BanI GGYRCC 1 cut(s) 686
BbsI GAAGAC 2 cut(s) 40, 232
BbvCI CCTCAGC 1 cut(s) 1155
BbvI GCAGC 4 cut(s) 524, 1037, 1065, 1105
BccI CCATC 5 cut(s) 119, 272, 307, 374, 593
BceAI ACGGC 4 cut(s) 550, 1022, 1030, 1167
BciT130I CCWGG 3 cut(s) 726, 871, 963
BclI TGATCA 2 cut(s) 528, 928
BcnI CCSGG 2 cut(s) 209, 684
BcoDI GTCTC 1 cut(s) 184
BfaI CTAG 2 cut(s) 15, 557
BfmI CTRYAG 1 cut(s) 1184
BfoI RGCGCY 1 cut(s) 264
BfuAI ACCTGC 1 cut(s) 1133
BisI GCNGC 4 cut(s) 538, 1026, 1054, 1119
BlsI GCNGC 4 cut(s) 539, 1027, 1055, 1120
BmcAI AGTACT 1 cut(s) 859
Bme1390I CCNGG 5 cut(s) 209, 684, 726, 871, 963
Bme18I GGWCC 1 cut(s) 722
BmgT120I GGNCC 4 cut(s) 165, 248, 680, 722
BmiI GGNNCC 2 cut(s) 682, 688
BmrFI CCNGG 5 cut(s) 209, 684, 726, 871, 963
BmrI ACTGGG 3 cut(s) 319, 849, 870
BmuI ACTGGG 3 cut(s) 319, 849, 870
BpiI GAAGAC 2 cut(s) 40, 232
BpmI CTGGAG 1 cut(s) 996
Bpu10I CCTNAGC 1 cut(s) 1155
Bpu14I TTCGAA 1 cut(s) 470
BpuMI CCSGG 2 cut(s) 209, 684
BsaJI CCNNGG 4 cut(s) 654, 682, 725, 961
BsaWI WCCGGW 2 cut(s) 371, 812
Bsc4I CCNNNNNNNGG 5 cut(s) 333, 731, 860, 861, 967
Bse118I RCCGGY 3 cut(s) 281, 326, 812
Bse1I ACTGG 7 cut(s) 314, 338, 403, 624, 690, 855, 865
Bse21I CCTNAGG 1 cut(s) 70
Bse3DI GCAATG 1 cut(s) 955
BseBI CCWGG 3 cut(s) 726, 871, 963
BseDI CCNNGG 4 cut(s) 654, 682, 725, 961
BseGI GGATG 2 cut(s) 497, 1096
BseLI CCNNNNNNNGG 5 cut(s) 333, 731, 860, 861, 967
BseMI GCAATG 1 cut(s) 955
BseMII CTCAG 2 cut(s) 833, 1146
BseNI ACTGG 7 cut(s) 314, 338, 403, 624, 690, 855, 865
BseXI GCAGC 4 cut(s) 524, 1037, 1065, 1105
BshFI GGCC 4 cut(s) 167, 250, 419, 681
BshNI GGYRCC 1 cut(s) 686
BshTI ACCGGT 1 cut(s) 812
BsiSI CCGG 7 cut(s) 209, 282, 327, 372, 423, 684, 813
BslFI GGGAC 2 cut(s) 191, 422
BslI CCNNNNNNNGG 5 cut(s) 333, 731, 860, 861, 967
BsmAI GTCTC 1 cut(s) 184
BsmFI GGGAC 2 cut(s) 191, 422
BsmI GAATGC 2 cut(s) 149, 603
BsnI GGCC 4 cut(s) 167, 250, 419, 681
Bsp119I TTCGAA 1 cut(s) 470
Bsp143I GATC 3 cut(s) 528, 834, 928
BspACI CCGC 1 cut(s) 183
BspANI GGCC 4 cut(s) 167, 250, 419, 681
BspCNI CTCAG 2 cut(s) 832, 1147
BspHI TCATGA 1 cut(s) 51
BspLI GGNNCC 2 cut(s) 682, 688
BspMI ACCTGC 1 cut(s) 1133
BspPI GGATC 1 cut(s) 842
BspT104I TTCGAA 1 cut(s) 470
BspT107I GGYRCC 1 cut(s) 686
BsrDI GCAATG 1 cut(s) 955
BsrFI RCCGGY 3 cut(s) 281, 326, 812
BsrI ACTGG 7 cut(s) 314, 338, 403, 624, 690, 855, 865
BssAI RCCGGY 3 cut(s) 281, 326, 812
BssECI CCNNGG 4 cut(s) 654, 682, 725, 961
BssMI GATC 3 cut(s) 528, 834, 928
Bst2UI CCWGG 3 cut(s) 726, 871, 963
Bst4CI ACNGT 3 cut(s) 100, 802, 1165
BstAPI GCANNNNNTGC 2 cut(s) 432, 1034
BstBI TTCGAA 1 cut(s) 470
BstC8I GCNNGC 2 cut(s) 192, 283
BstDEI CTNAG 4 cut(s) 64, 70, 819, 1155
BstDSI CCRYGG 1 cut(s) 654
BstEII GGTNACC 1 cut(s) 361
BstF5I GGATG 2 cut(s) 497, 1096
BstH2I RGCGCY 1 cut(s) 264
BstHHI GCGC 2 cut(s) 77, 263
BstKTI GATC 3 cut(s) 531, 837, 931
BstMAI GTCTC 1 cut(s) 184
BstMBI GATC 3 cut(s) 528, 834, 928
BstMWI GCNNNNNNNGC 5 cut(s) 74, 191, 432, 1034, 1124
BstNI CCWGG 3 cut(s) 726, 871, 963
BstNSI RCATGY 3 cut(s) 353, 720, 893
BstPI GGTNACC 1 cut(s) 361
BstSCI CCNGG 5 cut(s) 207, 682, 724, 869, 961
BstSFI CTRYAG 1 cut(s) 1184
BstV1I GCAGC 4 cut(s) 524, 1037, 1065, 1105
BstV2I GAAGAC 2 cut(s) 40, 232
BstXI CCANNNNNNTGG 1 cut(s) 1145
Bsu36I CCTNAGG 1 cut(s) 70
BsuRI GGCC 4 cut(s) 167, 250, 419, 681
BtgI CCRYGG 1 cut(s) 654
BtsCI GGATG 2 cut(s) 497, 1096
BtsIMutI CAGTG 3 cut(s) 96, 396, 631
BveI ACCTGC 1 cut(s) 1133
Cac8I GCNNGC 2 cut(s) 192, 283
CciI TCATGA 1 cut(s) 51
CfoI GCGC 2 cut(s) 77, 263
Cfr10I RCCGGY 3 cut(s) 281, 326, 812
Cfr13I GGNCC 4 cut(s) 165, 248, 680, 722
Csp6I GTAC 4 cut(s) 816, 858, 1000, 1161
CspAI ACCGGT 1 cut(s) 812
CviAII CATG 9 cut(s) 52, 162, 252, 350, 717, 731, 843, 890, 1139
CviQI GTAC 4 cut(s) 816, 858, 1000, 1161
DdeI CTNAG 4 cut(s) 64, 70, 819, 1155
DpnI GATC 3 cut(s) 530, 836, 930
DpnII GATC 3 cut(s) 528, 834, 928
DraIII CACNNNGTG 2 cut(s) 526, 547
EciI GGCGGA 1 cut(s) 172
Eco147I AGGCCT 1 cut(s) 419
Eco47I GGWCC 1 cut(s) 722
Eco57I CTGAAG 2 cut(s) 69, 1143
Eco81I CCTNAGG 1 cut(s) 70
Eco91I GGTNACC 1 cut(s) 361
EcoO65I GGTNACC 1 cut(s) 361
EcoRII CCWGG 3 cut(s) 724, 869, 961
FaeI CATG 9 cut(s) 55, 165, 255, 353, 720, 734, 846, 893, 1142
FaqI GGGAC 2 cut(s) 191, 422
FatI CATG 9 cut(s) 51, 161, 251, 349, 716, 730, 842, 889, 1138
FbaI TGATCA 2 cut(s) 528, 928
FblI GTMKAC 2 cut(s) 620, 850
Fnu4HI GCNGC 4 cut(s) 538, 1026, 1054, 1119
FokI GGATG 2 cut(s) 484, 1103
Fsp4HI GCNGC 4 cut(s) 538, 1026, 1054, 1119
FspBI CTAG 2 cut(s) 15, 557
GlaI GCGC 2 cut(s) 76, 262
GluI GCNGC 4 cut(s) 538, 1026, 1054, 1119
GsuI CTGGAG 1 cut(s) 996
HaeII RGCGCY 1 cut(s) 264
HaeIII GGCC 4 cut(s) 167, 250, 419, 681
HapII CCGG 7 cut(s) 209, 282, 327, 372, 423, 684, 813
HhaI GCGC 2 cut(s) 77, 263
Hin1II CATG 9 cut(s) 55, 165, 255, 353, 720, 734, 846, 893, 1142
Hin6I GCGC 2 cut(s) 75, 261
HinP1I GCGC 2 cut(s) 75, 261
HincII GTYRAC 1 cut(s) 61
HindII GTYRAC 1 cut(s) 61
HindIII AAGCTT 2 cut(s) 171, 1125
HinfI GANTC 3 cut(s) 118, 137, 971
HpaII CCGG 7 cut(s) 209, 282, 327, 372, 423, 684, 813
HphI GGTGA 3 cut(s) 325, 802, 841
Hpy166II GTNNAC 3 cut(s) 61, 621, 851
Hpy188I TCNGA 2 cut(s) 304, 822
Hpy188III TCNNGA 6 cut(s) 15, 52, 122, 383, 968, 975
Hpy8I GTNNAC 3 cut(s) 61, 621, 851
HpyCH4III ACNGT 3 cut(s) 100, 802, 1165
HpyCH4IV ACGT 4 cut(s) 546, 609, 711, 786
HpyCH4V TGCA 7 cut(s) 161, 255, 414, 716, 781, 1053, 1142
HpyF10VI GCNNNNNNNGC 5 cut(s) 74, 191, 432, 1034, 1124
HpyF3I CTNAG 4 cut(s) 64, 70, 819, 1155
HpySE526I ACGT 4 cut(s) 546, 609, 711, 786
Hsp92II CATG 9 cut(s) 55, 165, 255, 353, 720, 734, 846, 893, 1142
HspAI GCGC 2 cut(s) 75, 261
KroI GCCGGC 1 cut(s) 281
KroNI GCCGGC 1 cut(s) 283
Ksp22I TGATCA 2 cut(s) 528, 928
Kzo9I GATC 3 cut(s) 528, 834, 928
LmnI GCTCC 4 cut(s) 113, 443, 760, 1061
Lsp1109I GCAGC 4 cut(s) 524, 1037, 1065, 1105
MaeI CTAG 2 cut(s) 15, 557
MaeII ACGT 4 cut(s) 546, 609, 711, 786
MaeIII GTNAC 8 cut(s) 88, 100, 329, 361, 628, 787, 802, 1070
MalI GATC 3 cut(s) 530, 836, 930
MboI GATC 3 cut(s) 528, 834, 928
MboII GAAGA 2 cut(s) 40, 232
MfeI CAATTG 1 cut(s) 675
MlyI GAGTC 2 cut(s) 131, 980
MnlI CCTC 8 cut(s) 164, 210, 430, 586, 760, 825, 1081, 1150
MroNI GCCGGC 1 cut(s) 281
MseI TTAA 2 cut(s) 795, 1095
MslI CAYNNNNRTG 3 cut(s) 354, 482, 1143
MspI CCGG 7 cut(s) 209, 282, 327, 372, 423, 684, 813
MspR9I CCNGG 5 cut(s) 209, 684, 726, 871, 963
MunI CAATTG 1 cut(s) 675
Mva1269I GAATGC 2 cut(s) 149, 603
MvaI CCWGG 3 cut(s) 726, 871, 963
MwoI GCNNNNNNNGC 5 cut(s) 74, 191, 432, 1034, 1124
NaeI GCCGGC 1 cut(s) 283
NciI CCSGG 2 cut(s) 209, 684
NdeII GATC 3 cut(s) 528, 834, 928
NgoMIV GCCGGC 1 cut(s) 281
NlaIII CATG 9 cut(s) 55, 165, 255, 353, 720, 734, 846, 893, 1142
NlaIV GGNNCC 2 cut(s) 682, 688
NmuCI GTSAC 3 cut(s) 88, 100, 628
NspI RCATGY 3 cut(s) 353, 720, 893
NspV TTCGAA 1 cut(s) 470
PagI TCATGA 1 cut(s) 51
PaqCI CACCTGC 1 cut(s) 1133
PceI AGGCCT 1 cut(s) 419
PctI GAATGC 2 cut(s) 149, 603
PdiI GCCGGC 1 cut(s) 283
PfeI GAWTC 1 cut(s) 118
PinAI ACCGGT 1 cut(s) 812
PkrI GCNGC 4 cut(s) 539, 1027, 1055, 1120
PleI GAGTC 2 cut(s) 131, 979
PpsI GAGTC 2 cut(s) 131, 979
Psp1406I AACGTT 1 cut(s) 711
Psp6I CCWGG 3 cut(s) 724, 869, 961
PspEI GGTNACC 1 cut(s) 361
PspGI CCWGG 3 cut(s) 724, 869, 961
PspN4I GGNNCC 2 cut(s) 682, 688
PspPI GGNCC 4 cut(s) 165, 248, 680, 722
RsaI GTAC 4 cut(s) 817, 859, 1001, 1162
RsaNI GTAC 4 cut(s) 816, 858, 1000, 1161
RseI CAYNNNNRTG 3 cut(s) 354, 482, 1143
SaqAI TTAA 2 cut(s) 795, 1095
SatI GCNGC 4 cut(s) 538, 1026, 1054, 1119
Sau3AI GATC 3 cut(s) 528, 834, 928
Sau96I GGNCC 4 cut(s) 165, 248, 680, 722
ScaI AGTACT 1 cut(s) 859
SchI GAGTC 2 cut(s) 131, 980
ScrFI CCNGG 5 cut(s) 209, 684, 726, 871, 963
SfcI CTRYAG 1 cut(s) 1184
SfuI TTCGAA 1 cut(s) 470
SinI GGWCC 1 cut(s) 722
SmiMI CAYNNNNRTG 3 cut(s) 354, 482, 1143
SseBI AGGCCT 1 cut(s) 419
SsiI CCGC 1 cut(s) 183
SspMI CTAG 2 cut(s) 15, 557
StuI AGGCCT 1 cut(s) 419
StyD4I CCNGG 5 cut(s) 207, 682, 724, 869, 961
TaaI ACNGT 3 cut(s) 100, 802, 1165
TaiI ACGT 4 cut(s) 549, 612, 714, 789
TaqI TCGA 2 cut(s) 470, 1047
TaqII GACCGA 2 cut(s) 149, 226
TatI WGTACW 1 cut(s) 857
TfiI GAWTC 1 cut(s) 118
Tru1I TTAA 2 cut(s) 795, 1095
Tru9I TTAA 2 cut(s) 795, 1095
TscAI CASTG 3 cut(s) 103, 403, 631
TseFI GTSAC 3 cut(s) 88, 100, 628
TseI GCWGC 4 cut(s) 537, 1025, 1053, 1118
Tsp45I GTSAC 3 cut(s) 88, 100, 628
TspDTI ATGAA 3 cut(s) 40, 68, 500
TspGWI ACGGA 1 cut(s) 402
TspRI CASTG 3 cut(s) 103, 403, 631
VpaK11BI GGWCC 1 cut(s) 722
XapI RAATTY 1 cut(s) 1043
XbaI TCTAGA 1 cut(s) 14
XceI RCATGY 3 cut(s) 353, 720, 893
XcmI CCANNNNNNNNNTGG 1 cut(s) 306
XmiI GTMKAC 2 cut(s) 620, 850
XspI CTAG 2 cut(s) 15, 557
ZrmI AGTACT 1 cut(s) 859
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.