RLG00000025555

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000126
Physical Location & Seq
Reverse (-)
46656825 .. 46660434
3610 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025555

Sequence Viewer

Length: 2463 bp
ATGGAGAATGATCCAGACCCGGAAATGGAAGAGTTGGAGGCGAGGCAGAGGAGCCTAGGCAGAGCCTTCGACTCCTTGAATGTCCAAGCTTCTTCGGTCCTGTTGTTCACCGCGCAGTGGAAGGAGCTCGAGGACCATTTTGAGTCCACCCGGAAGGAGCTCCGGACCCGGTTGGCGGAGCAGGAGGAGCGCGTGAAGCTAGTCGCGGAGGTGGAGGCGAGGGCGGTGAGGTTGAAGACGGAAATGGAGGCCAAAGCTAAGGAATTGGGGGAAATGGAGGAGGTGGTGGAGCAGAAGCAGCGAGAGGTTGAAGAAGGTAATAGTCAGTTGTGTTGTATTAACTTGTTGATTGAAGAAAGCAGAGAAGAGCTTAGAGTTTGTGAGAGTCAGTGTTCGCTTTTTGATAAATTGGTTAAAGAGAGGTCTAGGAAGTTGAATTGGGTGGAGAAAAGAGTAGAGGAGAAGTTGAATCGGGTTGAGGTGGAAGAGAGGAAGTTAGATGAGATTAGGGGGTTGATTGAGGAGAAAAGGAGAGAACTTGGAGAGTGTGAGAGTGATTTGGAGTTGAAAGAGGAGAGATTGAGGTTGGTGGAGAAATCGATTGTGAATTGCGATAAGATACTTGATTTGAAGGAGAAATTGGTTAGTGTAGTGGATTTGAAGGTGAAAGATTTCTGCTTGCTGGAGAAATCGATGGAGGAGTGGTCATGTAAGCTTGAAATGAACGAGAGGGAGCTCGAAGGATGTGTTGCTAAGATAGAAGCAAAAGAGGGACAAGTTGATAGAAAGATTGAGGAGCTTAATTTGGTTCATAACAAGTTCCTTGATGAGGTACAGTTGAAAGAGAAACATCTCGGTTCACTTGAAGAATCGGTACTAGAGCGCGAGAAGGATTTGCTTTTTTCAGTCCAGAAGTTAGTACAAGAGTGTTGCCGGGGAAGTGAGTTTACTAGGGATGGAAGAGGACTACAGCAGTTCATGGATGAGCATTTGAAGAGAATTGATTCCATGTGTATCGAACTGTCAGCGATTCTTAAAGAGTCCTCAGACCCGGCGAAATTGGTTTTGGATGCAATGCAGGGGTTTTTTCCAGACAACAGGGAGTTACATTTTGATTTGAGAGTTAGAAGAAGAGGTTGTTGTCTTTTGTTAAAGGAGTTGAAGACAATCTCCCCACAAATTAGTCCTCAGGTGGGAGTGGAGGCAACAAAACTGGCTGCTAATTGGAAGGCCAAGATGACAGTGGCTGGTGACAATGACTTGGAGGTTCTGGGCTTCTTGAGGCTTGTTGCTGCTTATGATTTGACTTCAATTTACGATGCCAAGGAGCTTAAAGGGCTTCTTTCTAGCGTTTCTAATGGTCAGCAAGCAGCTCATATTGGCCAGGCCCTTGGTTTTGCTGCACCTGCATCTCTTCAAAGTTCGCTAGAACCTGCAAAACTCGTGTTGGATTGGATGCAAACTGATTTATCACAATACTGGACAAAAGGTGATGTTCAGCTCGAAGCAACTTCAATCAAAACCTGCATTTTTGTATTACAGCAGCTAATGAGAGTCGTCCCCCATGTCGGACCACATGCGAAAGAGGATGCAATGAAGTTGGCAGTCCAATGGAAAGCAAAATTAAGAGCTAATGCTGAAAATGCCTGGGAGATTTTGGGTTTTTTGCACTTTATAGCTGCTTACGGGTTGGTTTTTACTTTAAATGTTGATGAGATTGTAACGCTTCTTGGGATGATTGCTCAGCACAAACAGGCTATAGAATTCTGTTGGAAACTTTCTTCTGAAGATAAGATCCCTGAGTTTATCCACTGTCTTGTTGAAAGGAAGCAGCTGTTGGAGGCCATTGGATTGATTTGTACCTTCAACTTAATTAACAGCATTCCCCCAGTACCACTCTTAAAAGAATACGTGAAGGAAAAGATGAAGTGTTGCAGAGATGGTTACACAAAAGAGAAATTACATGATGAAAAGGTTAAGGTTGTGGACCAGCACATAACTGATCTAAGAGCGATCATTAACCTCATCAAAGACTACAACCTGGAATCGGAATATCCATCTTCGAATGTTGAAACGGAAATAACTCAACTGGAGAAAGTAAAGGAGAAATGGAGAATAGTTCAGTCAGGGAATGTGGATAAAGAGCAGAAAAGAGGAACCAAACGTCGTAGCAGCACTCCCCCCACTAAGCTCAAACCACAACAGCAGCCCAATAAATCTCATCGGACAGCTGTAATATCTCCTAGGCCTCATCCATTGCAACTTTACACCCCGGTGTATCTGCAGCCAAATGCTTCACCTTTGCTGTCACACTCCAGGCAGTTTGGCACCATTCAGAATGCTGGAATACTCCACCCAAGTCCTAGTTATGCTGGAATACTCCACCCAAGTCCTAGTTATCATCCTAATCTACCCCCATGGAACCACCTCCCCAACTATGGTAGTGCCTTTTTTCCTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

821

Amino Acids

94.01

Weight (kDa)

5.83

Isoelectric Point (pI)

49.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 319 - 467 1.6e-30 Frigida-like protein
Frigida PF07899 469 - 703 3.6e-51 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1414
Acc36I ACCTGC 3 cut(s) 1414, 1441, 1532
AccB1I GGYRCC 1 cut(s) 2327
AccII CGCG 4 cut(s) 113, 192, 206, 885
AccIII TCCGGA 1 cut(s) 162
AciI CCGC 4 cut(s) 111, 176, 206, 224
AclWI GGATC 2 cut(s) 5, 1789
AcoI YGGCCR 1 cut(s) 1381
AcsI RAATTY 1 cut(s) 1763
AcuI CTGAAG 1 cut(s) 1806
AfaI GTAC 5 cut(s) 834, 876, 921, 1861, 1893
AfiI CCNNNNNNNGG 8 cut(s) 25, 117, 175, 829, 1193, 1568, 2047, 2438
AjnI CCWGG 4 cut(s) 1383, 1646, 2040, 2315
AjuI GAANNNNNNNTTGG 6 cut(s) 623, 655, 1049, 1081, 1820, 1852
AleI CACNNNNGTG 1 cut(s) 2273
Alw21I GWGCWC 3 cut(s) 129, 162, 738
AlwI GGATC 2 cut(s) 5, 1789
AlwNI CAGNNNCTG 1 cut(s) 1247
Ama87I CYCGRG 1 cut(s) 128
Aor13HI TCCGGA 1 cut(s) 162
AoxI GGCC 6 cut(s) 249, 1230, 1381, 1386, 1842, 2246
ApoI RAATTY 1 cut(s) 1763
Asp700I GAANNNNTTC 2 cut(s) 671, 1003
AspA2I CCTAGG 2 cut(s) 55, 2243
AspLEI GCGC 3 cut(s) 115, 192, 885
AspS9I GGNCC 6 cut(s) 97, 133, 165, 1387, 1571, 1987
AsuC2I CCSGG 6 cut(s) 20, 151, 169, 935, 1052, 2273
AsuHPI GGTGA 6 cut(s) 100, 238, 676, 1262, 1502, 2289
AsuII TTCGAA 1 cut(s) 2063
AvaI CYCGRG 1 cut(s) 128
AvaII GGWCC 5 cut(s) 97, 133, 165, 1571, 1987
AvrII CCTAGG 2 cut(s) 55, 2243
AxyI CCTNAGG 1 cut(s) 1188
BalI TGGCCA 1 cut(s) 1383
BanI GGYRCC 1 cut(s) 2327
BanII GRGCYC 3 cut(s) 129, 162, 738
BarI GAAGNNNNNNTAC 4 cut(s) 858, 890, 931, 963
BauI CACGAG 1 cut(s) 1442
BbsI GAAGAC 2 cut(s) 242, 1169
Bbv12I GWGCWC 3 cut(s) 129, 162, 738
BccI CCATC 4 cut(s) 688, 950, 1934, 2065
BcgI CGANNNNNNTGC 2 cut(s) 49, 83
BciT130I CCWGG 4 cut(s) 1385, 1648, 2042, 2317
BcnI CCSGG 6 cut(s) 20, 151, 169, 935, 1052, 2273
BfmI CTRYAG 3 cut(s) 968, 1758, 2282
BfuAI ACCTGC 3 cut(s) 1414, 1441, 1532
BlnI CCTAGG 2 cut(s) 55, 2243
BlpI GCTNAGC 1 cut(s) 1743
Bme18I GGWCC 5 cut(s) 97, 133, 165, 1571, 1987
BmeT110I CYCGRG 1 cut(s) 128
BmgT120I GGNCC 6 cut(s) 97, 133, 165, 1387, 1571, 1987
BmiI GGNNCC 5 cut(s) 53, 167, 2158, 2329, 2423
BmrI ACTGGG 1 cut(s) 1883
BmsI GCATC 5 cut(s) 1060, 1309, 1418, 1446, 1579
BmuI ACTGGG 1 cut(s) 1883
BpiI GAAGAC 2 cut(s) 242, 1169
BpmI CTGGAG 3 cut(s) 704, 2111, 2299
Bpu10I CCTNAGC 1 cut(s) 258
Bpu1102I GCTNAGC 1 cut(s) 1743
Bpu14I TTCGAA 1 cut(s) 2063
BpuEI CTTGAG 1 cut(s) 1300
BpuMI CCSGG 6 cut(s) 20, 151, 169, 935, 1052, 2273
Bsa29I ATCGAT 2 cut(s) 599, 692
BsaAI YACGTR 1 cut(s) 1912
BsaJI CCNNGG 8 cut(s) 55, 934, 1323, 1390, 1647, 2243, 2271, 2417
BsaWI WCCGGW 1 cut(s) 162
BsaXI ACNNNNNCTCC 2 cut(s) 689, 719
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 117, 175, 829, 1193, 1568, 2047, 2438
Bse1I ACTGG 4 cut(s) 1218, 1484, 1889, 2094
Bse21I CCTNAGG 1 cut(s) 1188
Bse3DI GCAATG 3 cut(s) 1080, 1599, 2255
BseAI TCCGGA 1 cut(s) 162
BseBI CCWGG 4 cut(s) 1385, 1648, 2042, 2317
BseCI ATCGAT 2 cut(s) 599, 692
BseDI CCNNGG 8 cut(s) 55, 934, 1323, 1390, 1647, 2243, 2271, 2417
BseGI GGATG 9 cut(s) 749, 961, 988, 1075, 1461, 1594, 1740, 2251, 2401
BseLI CCNNNNNNNGG 8 cut(s) 25, 117, 175, 829, 1193, 1568, 2047, 2438
BseMI GCAATG 3 cut(s) 1080, 1599, 2255
BseMII CTCAG 4 cut(s) 1059, 1202, 1757, 1791
BseNI ACTGG 4 cut(s) 1218, 1484, 1889, 2094
BseRI GAGGAG 8 cut(s) 64, 200, 293, 473, 536, 587, 713, 809
BsgI GTGCAG 1 cut(s) 1386
Bsh1236I CGCG 4 cut(s) 113, 192, 206, 885
BshFI GGCC 6 cut(s) 251, 1232, 1383, 1388, 1844, 2248
BshNI GGYRCC 1 cut(s) 2327
BshVI ATCGAT 2 cut(s) 599, 692
BsiHKAI GWGCWC 3 cut(s) 129, 162, 738
BsiHKCI CYCGRG 1 cut(s) 128
BsiSI CCGG 7 cut(s) 20, 151, 163, 169, 934, 1052, 2273
BslFI GGGAC 2 cut(s) 786, 1544
BslI CCNNNNNNNGG 8 cut(s) 25, 117, 175, 829, 1193, 1568, 2047, 2438
BsmFI GGGAC 2 cut(s) 786, 1544
BsmI GAATGC 2 cut(s) 1881, 2344
BsnI GGCC 6 cut(s) 251, 1232, 1383, 1388, 1844, 2248
BsoBI CYCGRG 1 cut(s) 128
Bsp119I TTCGAA 1 cut(s) 2063
Bsp1286I GDGCHC 3 cut(s) 129, 162, 738
Bsp13I TCCGGA 1 cut(s) 162
Bsp143I GATC 4 cut(s) 10, 1794, 2002, 2013
Bsp1720I GCTNAGC 1 cut(s) 1743
Bsp19I CCATGG 1 cut(s) 2417
BspACI CCGC 4 cut(s) 111, 176, 206, 224
BspANI GGCC 6 cut(s) 251, 1232, 1383, 1388, 1844, 2248
BspCNI CTCAG 4 cut(s) 1058, 1201, 1756, 1792
BspDI ATCGAT 2 cut(s) 599, 692
BspEI TCCGGA 1 cut(s) 162
BspFNI CGCG 4 cut(s) 113, 192, 206, 885
BspLI GGNNCC 5 cut(s) 53, 167, 2158, 2329, 2423
BspMAI CTGCAG 1 cut(s) 2286
BspMI ACCTGC 3 cut(s) 1414, 1441, 1532
BspPI GGATC 2 cut(s) 5, 1789
BspQI GCTCTTC 1 cut(s) 360
BspT104I TTCGAA 1 cut(s) 2063
BspT107I GGYRCC 1 cut(s) 2327
BsrDI GCAATG 3 cut(s) 1080, 1599, 2255
BsrI ACTGG 4 cut(s) 1218, 1484, 1889, 2094
BssECI CCNNGG 8 cut(s) 55, 934, 1323, 1390, 1647, 2243, 2271, 2417
BssMI GATC 4 cut(s) 10, 1794, 2002, 2013
BssSI CACGAG 1 cut(s) 1442
BssT1I CCWWGG 5 cut(s) 55, 1323, 1390, 2243, 2417
Bst2BI CACGAG 1 cut(s) 1442
Bst2UI CCWGG 4 cut(s) 1385, 1648, 2042, 2317
Bst4CI ACNGT 4 cut(s) 837, 1023, 1243, 1814
Bst6I CTCTTC 7 cut(s) 24, 360, 480, 955, 989, 1126, 1419
BstBAI YACGTR 1 cut(s) 1912
BstBI TTCGAA 1 cut(s) 2063
BstC8I GCNNGC 2 cut(s) 680, 1368
BstDEI CTNAG 9 cut(s) 258, 371, 753, 1045, 1188, 1743, 1800, 2006, 2187
BstDSI CCRYGG 1 cut(s) 2417
BstENI CCTNNNNNAGG 1 cut(s) 827
BstF5I GGATG 9 cut(s) 749, 961, 988, 1075, 1461, 1594, 1740, 2251, 2401
BstFNI CGCG 4 cut(s) 113, 192, 206, 885
BstHHI GCGC 3 cut(s) 115, 192, 885
BstKTI GATC 4 cut(s) 13, 1797, 2005, 2016
BstMBI GATC 4 cut(s) 10, 1794, 2002, 2013
BstMWI GCNNNNNNNGC 6 cut(s) 187, 196, 298, 1336, 1406, 1643
BstNI CCWGG 4 cut(s) 1385, 1648, 2042, 2317
BstNSI RCATGY 1 cut(s) 1580
BstSFI CTRYAG 3 cut(s) 968, 1758, 2282
BstUI CGCG 4 cut(s) 113, 192, 206, 885
BstV2I GAAGAC 2 cut(s) 242, 1169
BstX2I RGATCY 1 cut(s) 1794
BstXI CCANNNNNNTGG 1 cut(s) 1391
BstYI RGATCY 1 cut(s) 1794
Bsu15I ATCGAT 2 cut(s) 599, 692
Bsu36I CCTNAGG 1 cut(s) 1188
BsuRI GGCC 6 cut(s) 251, 1232, 1383, 1388, 1844, 2248
BsuTUI ATCGAT 2 cut(s) 599, 692
BtgI CCRYGG 1 cut(s) 2417
BtsCI GGATG 9 cut(s) 749, 961, 988, 1075, 1461, 1594, 1740, 2251, 2401
BtsI GCAGTG 1 cut(s) 122
BtsIMutI CAGTG 4 cut(s) 122, 395, 1248, 1810
BveI ACCTGC 3 cut(s) 1414, 1441, 1532
Cac8I GCNNGC 2 cut(s) 680, 1368
CaiI CAGNNNCTG 1 cut(s) 1247
CfoI GCGC 3 cut(s) 115, 192, 885
Cfr13I GGNCC 6 cut(s) 97, 133, 165, 1387, 1571, 1987
ClaI ATCGAT 2 cut(s) 599, 692
Csp6I GTAC 5 cut(s) 833, 875, 920, 1860, 1892
CviAII CATG 7 cut(s) 708, 979, 1009, 1565, 1577, 1964, 2418
CviQI GTAC 5 cut(s) 833, 875, 920, 1860, 1892
DdeI CTNAG 9 cut(s) 258, 371, 753, 1045, 1188, 1743, 1800, 2006, 2187
DpnI GATC 4 cut(s) 12, 1796, 2004, 2015
DpnII GATC 4 cut(s) 10, 1794, 2002, 2013
DraI TTTAAA 1 cut(s) 1704
EaeI YGGCCR 1 cut(s) 1381
Eam1104I CTCTTC 7 cut(s) 24, 360, 480, 955, 989, 1126, 1419
EarI CTCTTC 7 cut(s) 24, 360, 480, 955, 989, 1126, 1419
EciI GGCGGA 1 cut(s) 191
Ecl136II GAGCTC 3 cut(s) 127, 160, 736
Eco130I CCWWGG 5 cut(s) 55, 1323, 1390, 2243, 2417
Eco147I AGGCCT 1 cut(s) 2248
Eco24I GRGCYC 3 cut(s) 129, 162, 738
Eco47I GGWCC 5 cut(s) 97, 133, 165, 1571, 1987
Eco53kI GAGCTC 3 cut(s) 127, 160, 736
Eco57I CTGAAG 1 cut(s) 1806
Eco81I CCTNAGG 1 cut(s) 1188
Eco88I CYCGRG 1 cut(s) 128
EcoICRI GAGCTC 3 cut(s) 127, 160, 736
EcoNI CCTNNNNNAGG 1 cut(s) 827
EcoO109I RGGNCCY 1 cut(s) 1387
EcoRI GAATTC 1 cut(s) 1763
EcoRII CCWGG 4 cut(s) 1383, 1646, 2040, 2315
EcoT14I CCWWGG 5 cut(s) 55, 1323, 1390, 2243, 2417
EcoT38I GRGCYC 3 cut(s) 129, 162, 738
ErhI CCWWGG 5 cut(s) 55, 1323, 1390, 2243, 2417
FaeI CATG 7 cut(s) 711, 982, 1012, 1568, 1580, 1967, 2421
FalI AAGNNNNNCTT 2 cut(s) 1326, 1358
FaqI GGGAC 2 cut(s) 786, 1544
FatI CATG 7 cut(s) 707, 978, 1008, 1564, 1576, 1963, 2417
FokI GGATG 9 cut(s) 756, 968, 995, 1082, 1468, 1601, 1747, 2238, 2388
FriOI GRGCYC 3 cut(s) 129, 162, 738
GlaI GCGC 3 cut(s) 114, 191, 884
GsuI CTGGAG 3 cut(s) 704, 2111, 2299
HaeIII GGCC 6 cut(s) 251, 1232, 1383, 1388, 1844, 2248
HapII CCGG 7 cut(s) 20, 151, 163, 169, 934, 1052, 2273
HhaI GCGC 3 cut(s) 115, 192, 885
Hin1II CATG 7 cut(s) 711, 982, 1012, 1568, 1580, 1967, 2421
Hin6I GCGC 3 cut(s) 113, 190, 883
HinP1I GCGC 3 cut(s) 113, 190, 883
HindIII AAGCTT 2 cut(s) 87, 713
HpaII CCGG 7 cut(s) 20, 151, 163, 169, 934, 1052, 2273
HphI GGTGA 6 cut(s) 100, 238, 676, 1262, 1502, 2289
Hpy166II GTNNAC 5 cut(s) 108, 147, 860, 948, 1987
Hpy188I TCNGA 7 cut(s) 1048, 1571, 1786, 2050, 2226, 2337, 2462
Hpy188III TCNNGA 5 cut(s) 14, 163, 910, 1091, 1279
Hpy8I GTNNAC 5 cut(s) 108, 147, 860, 948, 1987
Hpy99I CGWCG 1 cut(s) 2169
HpyCH4III ACNGT 4 cut(s) 837, 1023, 1243, 1814
HpyCH4IV ACGT 2 cut(s) 1911, 2164
HpyF10VI GCNNNNNNNGC 6 cut(s) 187, 196, 298, 1336, 1406, 1643
HpyF3I CTNAG 9 cut(s) 258, 371, 753, 1045, 1188, 1743, 1800, 2006, 2187
HpySE526I ACGT 2 cut(s) 1911, 2164
Hsp92II CATG 7 cut(s) 711, 982, 1012, 1568, 1580, 1967, 2421
HspAI GCGC 3 cut(s) 113, 190, 883
Kpn2I TCCGGA 1 cut(s) 162
Kzo9I GATC 4 cut(s) 10, 1794, 2002, 2013
LguI GCTCTTC 1 cut(s) 360
LweI GCATC 5 cut(s) 1060, 1309, 1418, 1446, 1579
MaeII ACGT 2 cut(s) 1911, 2164
MaeIII GTNAC 5 cut(s) 1104, 1250, 1720, 1943, 2307
MalI GATC 4 cut(s) 12, 1796, 2004, 2015
MboI GATC 4 cut(s) 10, 1794, 2002, 2013
MflI RGATCY 1 cut(s) 1794
MhlI GDGCHC 3 cut(s) 129, 162, 738
MlsI TGGCCA 1 cut(s) 1383
MluNI TGGCCA 1 cut(s) 1383
MlyI GAGTC 5 cut(s) 65, 152, 394, 1049, 1563
MmeI TCCRAC 5 cut(s) 15, 1428, 1549, 1751, 1818
Mox20I TGGCCA 1 cut(s) 1383
MroI TCCGGA 1 cut(s) 162
MroXI GAANNNNTTC 2 cut(s) 671, 1003
MscI TGGCCA 1 cut(s) 1383
MslI CAYNNNNRTG 1 cut(s) 2273
Msp20I TGGCCA 1 cut(s) 1383
MspA1I CMGCKG 2 cut(s) 1834, 2231
MspI CCGG 7 cut(s) 20, 151, 163, 169, 934, 1052, 2273
Mva1269I GAATGC 2 cut(s) 1881, 2344
MvaI CCWGG 4 cut(s) 1385, 1648, 2042, 2317
MvnI CGCG 4 cut(s) 113, 192, 206, 885
MwoI GCNNNNNNNGC 6 cut(s) 187, 196, 298, 1336, 1406, 1643
NciI CCSGG 6 cut(s) 20, 151, 169, 935, 1052, 2273
NcoI CCATGG 1 cut(s) 2417
NdeII GATC 4 cut(s) 10, 1794, 2002, 2013
NlaIII CATG 7 cut(s) 711, 982, 1012, 1568, 1580, 1967, 2421
NlaIV GGNNCC 5 cut(s) 53, 167, 2158, 2329, 2423
NmuCI GTSAC 2 cut(s) 1250, 2307
NspI RCATGY 1 cut(s) 1580
NspV TTCGAA 1 cut(s) 2063
OliI CACNNNNGTG 1 cut(s) 2273
PacI TTAATTAA 1 cut(s) 1875
PaeR7I CTCGAG 1 cut(s) 128
PaqCI CACCTGC 1 cut(s) 1414
PceI AGGCCT 1 cut(s) 2248
PciSI GCTCTTC 1 cut(s) 360
PctI GAATGC 2 cut(s) 1881, 2344
PdmI GAANNNNTTC 2 cut(s) 671, 1003
PfeI GAWTC 5 cut(s) 469, 869, 1004, 1030, 2045
PleI GAGTC 5 cut(s) 65, 151, 393, 1048, 1562
PpsI GAGTC 5 cut(s) 65, 151, 393, 1048, 1562
Ppu21I YACGTR 1 cut(s) 1912
Psp124BI GAGCTC 3 cut(s) 129, 162, 738
Psp6I CCWGG 4 cut(s) 1383, 1646, 2040, 2315
PspGI CCWGG 4 cut(s) 1383, 1646, 2040, 2315
PspN4I GGNNCC 5 cut(s) 53, 167, 2158, 2329, 2423
PspPI GGNCC 6 cut(s) 97, 133, 165, 1387, 1571, 1987
PspXI VCTCGAGB 1 cut(s) 128
PstI CTGCAG 1 cut(s) 2286
PstNI CAGNNNCTG 1 cut(s) 1247
PsuI RGATCY 1 cut(s) 1794
PvuII CAGCTG 2 cut(s) 1834, 2231
RsaI GTAC 5 cut(s) 834, 876, 921, 1861, 1893
RsaNI GTAC 5 cut(s) 833, 875, 920, 1860, 1892
RseI CAYNNNNRTG 1 cut(s) 2273
SacI GAGCTC 3 cut(s) 129, 162, 738
SapI GCTCTTC 1 cut(s) 360
Sau3AI GATC 4 cut(s) 10, 1794, 2002, 2013
Sau96I GGNCC 6 cut(s) 97, 133, 165, 1387, 1571, 1987
SchI GAGTC 5 cut(s) 65, 152, 394, 1049, 1563
SduI GDGCHC 3 cut(s) 129, 162, 738
SfaNI GCATC 5 cut(s) 1060, 1309, 1418, 1446, 1579
SfcI CTRYAG 3 cut(s) 968, 1758, 2282
Sfr274I CTCGAG 1 cut(s) 128
SfuI TTCGAA 1 cut(s) 2063
SinI GGWCC 5 cut(s) 97, 133, 165, 1571, 1987
SlaI CTCGAG 1 cut(s) 128
SmiMI CAYNNNNRTG 1 cut(s) 2273
SmlI CTYRAG 2 cut(s) 128, 1279
SmoI CTYRAG 2 cut(s) 128, 1279
SseBI AGGCCT 1 cut(s) 2248
SsiI CCGC 4 cut(s) 111, 176, 206, 224
SstI GAGCTC 3 cut(s) 129, 162, 738
StuI AGGCCT 1 cut(s) 2248
StyI CCWWGG 5 cut(s) 55, 1323, 1390, 2243, 2417
TaaI ACNGT 4 cut(s) 837, 1023, 1243, 1814
TaiI ACGT 2 cut(s) 1914, 2167
TaqI TCGA 8 cut(s) 69, 129, 599, 692, 738, 1017, 1503, 2063
TaqII GACCGA 1 cut(s) 85
TatI WGTACW 1 cut(s) 919
TfiI GAWTC 5 cut(s) 469, 869, 1004, 1030, 2045
TscAI CASTG 4 cut(s) 122, 395, 1248, 1817
TseFI GTSAC 2 cut(s) 1250, 2307
Tsp45I GTSAC 2 cut(s) 1250, 2307
TspDTI ATGAA 6 cut(s) 737, 800, 967, 1610, 1940, 1983
TspGWI ACGGA 2 cut(s) 254, 2090
TspRI CASTG 4 cut(s) 122, 395, 1248, 1817
VpaK11BI GGWCC 5 cut(s) 97, 133, 165, 1571, 1987
XagI CCTNNNNNAGG 1 cut(s) 827
XapI RAATTY 1 cut(s) 1763
XceI RCATGY 1 cut(s) 1580
XcmI CCANNNNNNNNNTGG 1 cut(s) 1240
XhoI CTCGAG 1 cut(s) 128
XmaJI CCTAGG 2 cut(s) 55, 2243
XmnI GAANNNNTTC 2 cut(s) 671, 1003
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.