Rmu_sc0030229.1_g000001

Frigida-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0030229.1
OG0000126
Physical Location & Seq
Forward (+)
590 .. 2307
1718 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0030229.1_g000001.1.cds

Sequence Viewer

Length: 1718 bp
atgcagatgctcgacacgtggccacctgcatgccggcgtgggccccatcgaagccttcccccgtcaaagactgaaatgacgtcttctttcccgacttggcaaaccaaacgtccaaacgtaacagaatttcgctcacgccgattggccgtctccaccttcctcctgttccgcatttattcaaggctttctctctcctctcactctctctctctctctctcagagtcaccactatggagactgcggcggcggagttggaacaaaaatcggaggcgaaacagaggagcctaggcgcggcgtttgagtcgttgagttcgcaagcttcgtcgattctgaagtttacggtggagtggaaggagctggaggaccatttcgagtcgacccggagggtgctccggacccggttcgaggaggtaagggatcgcgtgaaggaggtggcggagatggaggcgaaggaggagaggctgaagatggaggtgaaggggagggagaaggagttgggggaaatcgaggaggtggtggagcggaggaggagggaggtggaggaaagtgagagttatttggagtctgtgagggctttgattgtagagaatgatgaggagcttagggttagggaggagaggtatgataaagttgagagattgattagggagaaggagagggaggtggaggagatggagaagcatgtgagagagaggtctaggaagttgagttggctggacaagaggatagaggtgaagaagaaggaggttgagaggaaggagagggagctgagagaggttagggatttggaggagaagaaattgagtggtgttagggggttgattgaggagaagaggaaggaagttgagttgaaggaagatgagatggtgatggtgaaagggagggttgaggattgtgatagggaaatgaaggagaaagaggagaggctgagtttgattgagaaatcgaaagaggaaatgattggtgtggtggatttgaaagggaaagagttctgtttgctgaagaaatcaatggaggagtggtgctgtaagattgaagtgaaggagagggagcttgaaggatgggttgataagttggaatcgaaagagaaggaagttgaattgaaggttgaggagcttgatttgattcgtagcaagttccttgatgaggttcagttcaaagaaaagcatttggattcgcttgaaaaatcgttactagaatgggaggaggatctgcattccctccagaagtcggtacaagaatgttcccggggaagtgagatcattagggatggaagaggattgcagcagttcatggacgagcatctgaagagaatcgattccatgggtactgaactgtcagcgattcttaaagactcttcagacccggggaagttggttttggatgcaatgcaggggttttatgctgacaacagggagttagattttgaattgagagttagaagaagaagttgttgtcttttgttagaggagttgaggagaatctctccacaaatgaatccgcaagtgaaagaggacgcgacgaaactggctgctaattggaaagccaagatgacagtggcgagtgacaatgagttggaggtcttgggatttttgtggcttattgctgcttatgacttaacttctatctacgatgcgaaggagcttaaaaggcttctttctaaagtttcgcggggtgaacaagcagctcaaataggcctggcccttggtattccggc
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

573

Amino Acids

67.42

Weight (kDa)

5.6

Isoelectric Point (pI)

56.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 34
AatII GACGTC 1 cut(s) 83
Acc36I ACCTGC 1 cut(s) 34
AccBSI CCGCTC 1 cut(s) 523
AccI GTMKAC 1 cut(s) 377
AccII CGCG 4 cut(s) 293, 423, 1520, 1672
AccIII TCCGGA 1 cut(s) 393
AciI CCGC 9 cut(s) 169, 242, 245, 248, 293, 437, 523, 1502, 1672
AclWI GGATC 2 cut(s) 426, 1218
AcoI YGGCCR 2 cut(s) 20, 144
AcsI RAATTY 1 cut(s) 125
AcuI CTGAAG 5 cut(s) 353, 485, 1022, 1328, 1344
AcvI CACGTG 1 cut(s) 18
AcyI GRCGYC 1 cut(s) 80
AfaI GTAC 2 cut(s) 1236, 1330
AfiI CCNNNNNNNGG 4 cut(s) 292, 406, 1147, 1231
AflIII ACRYGT 1 cut(s) 15
AjnI CCWGG 1 cut(s) 1698
AjuI GAANNNNNNNTTGG 2 cut(s) 1364, 1396
AluBI AGCT 8 cut(s) 320, 358, 601, 769, 1054, 1117, 1645, 1688
AluI AGCT 8 cut(s) 320, 358, 601, 769, 1054, 1117, 1645, 1688
Alw21I GWGCWC 1 cut(s) 393
Alw26I GTCTC 2 cut(s) 154, 230
AlwI GGATC 2 cut(s) 426, 1218
Ama87I CYCGRG 2 cut(s) 1248, 1366
Aor13HI TCCGGA 1 cut(s) 393
AoxI GGCC 5 cut(s) 20, 41, 144, 1696, 1701
ApaI GGGCCC 1 cut(s) 45
ApeKI GCWGC 4 cut(s) 1285, 1532, 1607, 1685
ApoI RAATTY 1 cut(s) 125
ArsI GACNNNNNNTTYG 2 cut(s) 94, 126
Asp700I GAANNNNTTC 2 cut(s) 989, 1318
AspA2I CCTAGG 1 cut(s) 286
AspLEI GCGC 1 cut(s) 293
AspS9I GGNCC 5 cut(s) 41, 42, 364, 396, 1702
AsuC2I CCSGG 6 cut(s) 382, 400, 1249, 1250, 1367, 1368
AsuHPI GGTGA 6 cut(s) 217, 487, 745, 880, 886, 1688
AvaI CYCGRG 2 cut(s) 1248, 1366
AvaII GGWCC 2 cut(s) 364, 396
AvrII CCTAGG 1 cut(s) 286
BaeGI GKGCMC 1 cut(s) 45
BalI TGGCCA 1 cut(s) 22
BanII GRGCYC 1 cut(s) 45
BbrPI CACGTG 1 cut(s) 18
BbsI GAAGAC 1 cut(s) 75
Bbv12I GWGCWC 1 cut(s) 393
BbvI GCAGC 4 cut(s) 1297, 1519, 1594, 1697
BccI CCATC 8 cut(s) 54, 436, 463, 667, 859, 865, 1056, 1265
BceAI ACGGC 1 cut(s) 131
BciT130I CCWGG 1 cut(s) 1700
BcnI CCSGG 6 cut(s) 382, 400, 1249, 1250, 1367, 1368
BcoDI GTCTC 2 cut(s) 154, 230
BfaI CTAG 3 cut(s) 287, 699, 1196
BfuAI ACCTGC 1 cut(s) 34
BisI GCNGC 7 cut(s) 243, 246, 294, 1286, 1533, 1608, 1686
BlnI CCTAGG 1 cut(s) 286
BlsI GCNGC 7 cut(s) 244, 247, 295, 1287, 1534, 1609, 1687
Bme1390I CCNGG 7 cut(s) 382, 400, 1249, 1250, 1367, 1368, 1700
Bme18I GGWCC 2 cut(s) 364, 396
BmeT110I CYCGRG 2 cut(s) 1248, 1366
BmgT120I GGNCC 5 cut(s) 41, 42, 364, 396, 1702
BmiI GGNNCC 4 cut(s) 43, 44, 284, 398
BmrFI CCNGG 7 cut(s) 382, 400, 1249, 1250, 1367, 1368, 1700
BmsI GCATC 3 cut(s) 1312, 1375, 1624
BpiI GAAGAC 1 cut(s) 75
BplI GAGNNNNNCTC 2 cut(s) 1471, 1503
BpmI CTGGAG 2 cut(s) 380, 1208
Bpu10I CCTNAGC 1 cut(s) 602
BpuMI CCSGG 6 cut(s) 382, 400, 1249, 1250, 1367, 1368
Bsa29I ATCGAT 1 cut(s) 1317
BsaAI YACGTR 1 cut(s) 18
BsaHI GRCGYC 1 cut(s) 80
BsaJI CCNNGG 7 cut(s) 286, 1248, 1249, 1323, 1366, 1367, 1705
BsaWI WCCGGW 1 cut(s) 393
BsaXI ACNNNNNCTCC 6 cut(s) 479, 509, 605, 635, 1007, 1037
Bsc4I CCNNNNNNNGG 4 cut(s) 292, 406, 1147, 1231
Bse118I RCCGGY 1 cut(s) 33
Bse1I ACTGG 1 cut(s) 1533
Bse3DI GCAATG 1 cut(s) 1395
BseAI TCCGGA 1 cut(s) 393
BseBI CCWGG 1 cut(s) 1700
BseCI ATCGAT 1 cut(s) 1317
BseDI CCNNGG 7 cut(s) 286, 1248, 1249, 1323, 1366, 1367, 1705
BseGI GGATG 3 cut(s) 1067, 1276, 1390
BseLI CCNNNNNNNGG 4 cut(s) 292, 406, 1147, 1231
BseMI GCAATG 1 cut(s) 1395
BseMII CTCAG 3 cut(s) 232, 761, 920
BseNI ACTGG 1 cut(s) 1533
BseSI GKGCMC 1 cut(s) 45
BseXI GCAGC 4 cut(s) 1297, 1519, 1594, 1697
Bsh1236I CGCG 4 cut(s) 293, 423, 1520, 1672
BshFI GGCC 5 cut(s) 22, 43, 146, 1698, 1703
BshVI ATCGAT 1 cut(s) 1317
BsiHKAI GWGCWC 1 cut(s) 393
BsiHKCI CYCGRG 2 cut(s) 1248, 1366
BsiSI CCGG 7 cut(s) 34, 382, 394, 400, 1249, 1367, 1715
BslI CCNNNNNNNGG 4 cut(s) 292, 406, 1147, 1231
BsmAI GTCTC 2 cut(s) 154, 230
BsmBI CGTCTC 1 cut(s) 154
BsmI GAATGC 1 cut(s) 1216
BsnI GGCC 5 cut(s) 22, 43, 146, 1698, 1703
BsoBI CYCGRG 2 cut(s) 1248, 1366
Bsp120I GGGCCC 1 cut(s) 41
Bsp1286I GDGCHC 2 cut(s) 45, 393
Bsp13I TCCGGA 1 cut(s) 393
Bsp143I GATC 3 cut(s) 418, 1210, 1260
Bsp19I CCATGG 1 cut(s) 1323
BspACI CCGC 9 cut(s) 169, 242, 245, 248, 293, 437, 523, 1502, 1672
BspANI GGCC 5 cut(s) 22, 43, 146, 1698, 1703
BspCNI CTCAG 3 cut(s) 231, 762, 921
BspDI ATCGAT 1 cut(s) 1317
BspEI TCCGGA 1 cut(s) 393
BspFNI CGCG 4 cut(s) 293, 423, 1520, 1672
BspLI GGNNCC 4 cut(s) 43, 44, 284, 398
BspMI ACCTGC 1 cut(s) 34
BspPI GGATC 2 cut(s) 426, 1218
BsrBI CCGCTC 1 cut(s) 523
BsrDI GCAATG 1 cut(s) 1395
BsrFI RCCGGY 1 cut(s) 33
BsrI ACTGG 1 cut(s) 1533
BssAI RCCGGY 1 cut(s) 33
BssECI CCNNGG 7 cut(s) 286, 1248, 1249, 1323, 1366, 1367, 1705
BssMI GATC 3 cut(s) 418, 1210, 1260
BssNI GRCGYC 1 cut(s) 80
BssT1I CCWWGG 3 cut(s) 286, 1323, 1705
Bst2UI CCWGG 1 cut(s) 1700
Bst4CI ACNGT 3 cut(s) 343, 1338, 1558
Bst6I CTCTTC 4 cut(s) 827, 1270, 1304, 1363
BstACI GRCGYC 1 cut(s) 80
BstBAI YACGTR 1 cut(s) 18
BstC8I GCNNGC 3 cut(s) 31, 35, 318
BstDEI CTNAG 4 cut(s) 218, 602, 770, 929
BstDSI CCRYGG 1 cut(s) 1323
BstENI CCTNNNNNAGG 1 cut(s) 1145
BstF5I GGATG 3 cut(s) 1067, 1276, 1390
BstFNI CGCG 4 cut(s) 293, 423, 1520, 1672
BstHHI GCGC 1 cut(s) 293
BstKTI GATC 3 cut(s) 421, 1213, 1263
BstMAI GTCTC 2 cut(s) 154, 230
BstMBI GATC 3 cut(s) 418, 1210, 1260
BstMWI GCNNNNNNNGC 1 cut(s) 1651
BstNI CCWGG 1 cut(s) 1700
BstNSI RCATGY 2 cut(s) 33, 686
BstSCI CCNGG 7 cut(s) 380, 398, 1247, 1248, 1365, 1366, 1698
BstSLI GKGCMC 1 cut(s) 45
BstUI CGCG 4 cut(s) 293, 423, 1520, 1672
BstV1I GCAGC 4 cut(s) 1297, 1519, 1594, 1697
BstV2I GAAGAC 1 cut(s) 75
BstX2I RGATCY 1 cut(s) 1210
BstYI RGATCY 1 cut(s) 1210
Bsu15I ATCGAT 1 cut(s) 1317
BsuRI GGCC 5 cut(s) 22, 43, 146, 1698, 1703
BsuTUI ATCGAT 1 cut(s) 1317
BtgI CCRYGG 1 cut(s) 1323
BtsCI GGATG 3 cut(s) 1067, 1276, 1390
BtsIMutI CAGTG 1 cut(s) 1563
BveI ACCTGC 1 cut(s) 34
Cac8I GCNNGC 3 cut(s) 31, 35, 318
CfoI GCGC 1 cut(s) 293
Cfr10I RCCGGY 1 cut(s) 33
Cfr13I GGNCC 5 cut(s) 41, 42, 364, 396, 1702
Cfr9I CCCGGG 2 cut(s) 1248, 1366
ClaI ATCGAT 1 cut(s) 1317
CseI GACGC 1 cut(s) 1526
Csp6I GTAC 2 cut(s) 1235, 1329
CviAII CATG 4 cut(s) 30, 683, 1294, 1324
CviQI GTAC 2 cut(s) 1235, 1329
DdeI CTNAG 4 cut(s) 218, 602, 770, 929
DpnI GATC 3 cut(s) 420, 1212, 1262
DpnII GATC 3 cut(s) 418, 1210, 1260
EaeI YGGCCR 2 cut(s) 20, 144
Eam1104I CTCTTC 4 cut(s) 827, 1270, 1304, 1363
EarI CTCTTC 4 cut(s) 827, 1270, 1304, 1363
EciI GGCGGA 2 cut(s) 263, 452
Eco130I CCWWGG 3 cut(s) 286, 1323, 1705
Eco147I AGGCCT 1 cut(s) 1698
Eco24I GRGCYC 1 cut(s) 45
Eco47I GGWCC 2 cut(s) 364, 396
Eco57I CTGAAG 5 cut(s) 353, 485, 1022, 1328, 1344
Eco72I CACGTG 1 cut(s) 18
Eco88I CYCGRG 2 cut(s) 1248, 1366
EcoNI CCTNNNNNAGG 1 cut(s) 1145
EcoO109I RGGNCCY 1 cut(s) 42
EcoRII CCWGG 1 cut(s) 1698
EcoT14I CCWWGG 3 cut(s) 286, 1323, 1705
EcoT38I GRGCYC 1 cut(s) 45
ErhI CCWWGG 3 cut(s) 286, 1323, 1705
Esp3I CGTCTC 1 cut(s) 154
FaeI CATG 4 cut(s) 33, 686, 1297, 1327
FaiI YATR 8 cut(s) 31, 233, 624, 684, 1295, 1325, 1404, 1614
FatI CATG 4 cut(s) 29, 682, 1293, 1323
FauI CCCGC 1 cut(s) 1665
FblI GTMKAC 1 cut(s) 377
Fnu4HI GCNGC 7 cut(s) 243, 246, 294, 1286, 1533, 1608, 1686
FokI GGATG 3 cut(s) 1074, 1283, 1397
FriOI GRGCYC 1 cut(s) 45
Fsp4HI GCNGC 7 cut(s) 243, 246, 294, 1286, 1533, 1608, 1686
FspBI CTAG 3 cut(s) 287, 699, 1196
GlaI GCGC 1 cut(s) 292
GluI GCNGC 7 cut(s) 243, 246, 294, 1286, 1533, 1608, 1686
GsuI CTGGAG 2 cut(s) 380, 1208
HaeIII GGCC 5 cut(s) 22, 43, 146, 1698, 1703
HapII CCGG 7 cut(s) 34, 382, 394, 400, 1249, 1367, 1715
HgaI GACGC 1 cut(s) 1526
HhaI GCGC 1 cut(s) 293
Hin1I GRCGYC 1 cut(s) 80
Hin1II CATG 4 cut(s) 33, 686, 1297, 1327
Hin6I GCGC 1 cut(s) 291
HinP1I GCGC 1 cut(s) 291
HincII GTYRAC 1 cut(s) 378
HindII GTYRAC 1 cut(s) 378
HindIII AAGCTT 1 cut(s) 318
HpaII CCGG 7 cut(s) 34, 382, 394, 400, 1249, 1367, 1715
HphI GGTGA 6 cut(s) 217, 487, 745, 880, 886, 1688
Hpy166II GTNNAC 3 cut(s) 339, 378, 1679
Hpy188I TCNGA 5 cut(s) 221, 268, 333, 1308, 1363
Hpy188III TCNNGA 3 cut(s) 91, 394, 1225
Hpy8I GTNNAC 3 cut(s) 339, 378, 1679
Hpy99I CGWCG 2 cut(s) 328, 1525
HpyCH4III ACNGT 3 cut(s) 343, 1338, 1558
HpyCH4IV ACGT 4 cut(s) 17, 80, 109, 117
HpyCH4V TGCA 6 cut(s) 4, 29, 1216, 1285, 1388, 1393
HpyF10VI GCNNNNNNNGC 1 cut(s) 1651
HpyF3I CTNAG 4 cut(s) 218, 602, 770, 929
HpySE526I ACGT 4 cut(s) 17, 80, 109, 117
Hsp92I GRCGYC 1 cut(s) 80
Hsp92II CATG 4 cut(s) 33, 686, 1297, 1327
HspAI GCGC 1 cut(s) 291
Kpn2I TCCGGA 1 cut(s) 393
KroI GCCGGC 1 cut(s) 33
KroNI GCCGGC 1 cut(s) 35
Kzo9I GATC 3 cut(s) 418, 1210, 1260
LmnI GCTCC 9 cut(s) 282, 355, 396, 520, 598, 766, 1051, 1114, 1642
Lsp1109I GCAGC 4 cut(s) 1297, 1519, 1594, 1697
LweI GCATC 3 cut(s) 1312, 1375, 1624
MaeI CTAG 3 cut(s) 287, 699, 1196
MaeII ACGT 4 cut(s) 17, 80, 109, 117
MaeIII GTNAC 4 cut(s) 118, 223, 1191, 1565
MalI GATC 3 cut(s) 420, 1212, 1262
MbiI CCGCTC 1 cut(s) 523
MboI GATC 3 cut(s) 418, 1210, 1260
MflI RGATCY 1 cut(s) 1210
MhlI GDGCHC 2 cut(s) 45, 393
MlsI TGGCCA 1 cut(s) 22
MluCI AATT 5 cut(s) 125, 800, 1100, 1430, 1537
MluNI TGGCCA 1 cut(s) 22
MlyI GAGTC 5 cut(s) 231, 311, 383, 572, 1349
MmeI TCCRAC 3 cut(s) 234, 1056, 1557
Mox20I TGGCCA 1 cut(s) 22
MroI TCCGGA 1 cut(s) 393
MroNI GCCGGC 1 cut(s) 33
MroXI GAANNNNTTC 2 cut(s) 989, 1318
MscI TGGCCA 1 cut(s) 22
MseI TTAA 3 cut(s) 1350, 1619, 1647
MslI CAYNNNNRTG 2 cut(s) 28, 230
Msp20I TGGCCA 1 cut(s) 22
MspI CCGG 7 cut(s) 34, 382, 394, 400, 1249, 1367, 1715
MspR9I CCNGG 7 cut(s) 382, 400, 1249, 1250, 1367, 1368, 1700
Mva1269I GAATGC 1 cut(s) 1216
MvaI CCWGG 1 cut(s) 1700
MvnI CGCG 4 cut(s) 293, 423, 1520, 1672
MwoI GCNNNNNNNGC 1 cut(s) 1651
NaeI GCCGGC 1 cut(s) 35
NciI CCSGG 6 cut(s) 382, 400, 1249, 1250, 1367, 1368
NcoI CCATGG 1 cut(s) 1323
NdeII GATC 3 cut(s) 418, 1210, 1260
NgoMIV GCCGGC 1 cut(s) 33
NlaIII CATG 4 cut(s) 33, 686, 1297, 1327
NlaIV GGNNCC 4 cut(s) 43, 44, 284, 398
NmuCI GTSAC 2 cut(s) 223, 1565
NspI RCATGY 2 cut(s) 33, 686
PaeI GCATGC 1 cut(s) 33
PaqCI CACCTGC 1 cut(s) 34
PceI AGGCCT 1 cut(s) 1698
PcsI WCGNNNNNNNCGW 2 cut(s) 136, 320
PctI GAATGC 1 cut(s) 1216
PdiI GCCGGC 1 cut(s) 35
PdmI GAANNNNTTC 2 cut(s) 989, 1318
PfeI GAWTC 9 cut(s) 328, 1079, 1126, 1175, 1314, 1319, 1345, 1482, 1498
PkrI GCNGC 7 cut(s) 244, 247, 295, 1287, 1534, 1609, 1687
PleI GAGTC 5 cut(s) 230, 310, 382, 571, 1349
PmaCI CACGTG 1 cut(s) 18
PmlI CACGTG 1 cut(s) 18
PpsI GAGTC 5 cut(s) 230, 310, 382, 571, 1349
Ppu21I YACGTR 1 cut(s) 18
Psp6I CCWGG 1 cut(s) 1698
PspCI CACGTG 1 cut(s) 18
PspGI CCWGG 1 cut(s) 1698
PspN4I GGNNCC 4 cut(s) 43, 44, 284, 398
PspOMI GGGCCC 1 cut(s) 41
PspPI GGNCC 5 cut(s) 41, 42, 364, 396, 1702
PsuI RGATCY 1 cut(s) 1210
RsaI GTAC 2 cut(s) 1236, 1330
RsaNI GTAC 2 cut(s) 1235, 1329
RseI CAYNNNNRTG 2 cut(s) 28, 230
SalI GTCGAC 1 cut(s) 376
SaqAI TTAA 3 cut(s) 1350, 1619, 1647
SatI GCNGC 7 cut(s) 243, 246, 294, 1286, 1533, 1608, 1686
Sau3AI GATC 3 cut(s) 418, 1210, 1260
Sau96I GGNCC 5 cut(s) 41, 42, 364, 396, 1702
SchI GAGTC 5 cut(s) 231, 311, 383, 572, 1349
ScrFI CCNGG 7 cut(s) 382, 400, 1249, 1250, 1367, 1368, 1700
SduI GDGCHC 2 cut(s) 45, 393
SfaNI GCATC 3 cut(s) 1312, 1375, 1624
SinI GGWCC 2 cut(s) 364, 396
SmaI CCCGGG 2 cut(s) 1250, 1368
SmiMI CAYNNNNRTG 2 cut(s) 28, 230
SphI GCATGC 1 cut(s) 33
Sse9I AATT 5 cut(s) 125, 800, 1100, 1430, 1537
SseBI AGGCCT 1 cut(s) 1698
SsiI CCGC 9 cut(s) 169, 242, 245, 248, 293, 437, 523, 1502, 1672
SspMI CTAG 3 cut(s) 287, 699, 1196
StuI AGGCCT 1 cut(s) 1698
StyD4I CCNGG 7 cut(s) 380, 398, 1247, 1248, 1365, 1366, 1698
StyI CCWWGG 3 cut(s) 286, 1323, 1705
TaaI ACNGT 3 cut(s) 343, 1338, 1558
TaiI ACGT 4 cut(s) 20, 83, 112, 120
TasI AATT 5 cut(s) 125, 800, 1100, 1430, 1537
TauI GCSGC 3 cut(s) 245, 248, 296
TfiI GAWTC 9 cut(s) 328, 1079, 1126, 1175, 1314, 1319, 1345, 1482, 1498
Tru1I TTAA 3 cut(s) 1350, 1619, 1647
Tru9I TTAA 3 cut(s) 1350, 1619, 1647
TscAI CASTG 1 cut(s) 1563
TseFI GTSAC 2 cut(s) 223, 1565
TseI GCWGC 4 cut(s) 1285, 1532, 1607, 1685
Tsp45I GTSAC 2 cut(s) 223, 1565
TspDTI ATGAA 3 cut(s) 923, 1282, 1511
TspMI CCCGGG 2 cut(s) 1248, 1366
TspRI CASTG 1 cut(s) 1563
VpaK11BI GGWCC 2 cut(s) 364, 396
XagI CCTNNNNNAGG 1 cut(s) 1145
XapI RAATTY 1 cut(s) 125
XceI RCATGY 2 cut(s) 33, 686
XcmI CCANNNNNNNNNTGG 1 cut(s) 1555
XmaI CCCGGG 2 cut(s) 1248, 1366
XmaJI CCTAGG 1 cut(s) 286
XmiI GTMKAC 1 cut(s) 377
XmnI GAANNNNTTC 2 cut(s) 989, 1318
XspI CTAG 3 cut(s) 287, 699, 1196
ZraI GACGTC 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.