RLG00000025541

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000126
Physical Location & Seq
Reverse (-)
46562324 .. 46564726
2403 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025541

Sequence Viewer

Length: 1365 bp
ATGGGTAGCGAAATGTCAGCAATTCTTAAATCCTCATCTGACCCAGCAAAATTGGTTTTGGATGCAATGCAAGGATTTTACCCTTCAAGTTCAACTCTGGACAACAAGGAGACTCATTTTGATTTGACAGTTATTAGAAGGAGTTGTATTCTTTTGTTAGAGGATTTGAAGAGAATGTCACCACAAATTAATGCTCGGGTGAGAAACGAAGCAATAAAGTTGGTGGCTGACTGGAAGACTAAGATGACAGTATCTAGTGAGAATACACAGGAGATTTTGGGGTTTTTGCGGCTTGTTAATACGTATGGATTGAGTTCGATGTATGATGCGAAAGATCTTCAAAGCCTTCTTACTGTTGTTCATAAGCCCGAACAAGCATCTCAATCTTGTAGGGCCCTTGGTATCAAAGATAAAGCACCTGGAACCAACATCATTTCTTCCCTTATCAAAACTGTGGAACCAGAATCTTCACTGGCTATAAATGCAACAACTCTCTCTTCTCCAAATCCTTCTTCCCAGAATGACATGTTGGCTTCTCTTTTATTGGTTTCTGACCCAGCAGAACATGTCTTGAATAGTGTGCAGAGATCATTTTCTCAGTACTGGAAACATGAAGATGTTAGTTTCAAAGAACGTATCATGTTGAATAACATGTCTTTGTTAGAGTGTCTAATGATTGTCTCACCGCATATTGGACCTCATGTTAAAGAAGATGAAAAACTTCTTGCAGCCTATTGGAAACCAAAGATGACAGGCAATACTGAAAATTCAGTTGAGACTTTAGGATTTTTGCTGTTTATATCTACATATGGATTGGTTTCTACATTGAATACAGAGGAGATTATAAAGCTTCTTGAGGTGATATCTCAGAATAAAGGGGTTGTAGATTTATGTCAGACGCATGGTTATGCAGATAAGATCTCTGATTTTATTCGGAATCTGATAGAAAGGAACCAACTGATGGATGCTGTTGGATTTATTTGCACCTTCAACCTAGCTGACAAGCTCCCCCCAATACCACTCTTAAAACAATATGTAGAGGATGCAAAGAAGTGTTCCGAAGTAACTTGCAGCTTAAAGATACTTCATGATGAAAAGGTTAAGATTGTAGACAACCTCATAGCTGATCTAAGAGCTGGGAAACAATGCATCAAAGAATACCATCTCGAATGCGAATACCCATATGCGGACATTGAAATGCAAATAGTTCAGCTGGAAAAACGGAAGGAGAATTGGAGATGCTCGGCGCCATCTCTTGGCTCCAGTATTATTGAATCACAAGTGCAGAGAAAAAGAAAGAAGCTTAATACTAGTAGTTCTGCCCGCACGCATGCATTTCCATCACAACAGCAGCGTAAGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

455

Amino Acids

51.01

Weight (kDa)

7.12

Isoelectric Point (pI)

53.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 3 - 151 6.9e-30 Frigida-like protein
Frigida PF07899 173 - 411 1.2e-49 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 845
AccB1I GGYRCC 1 cut(s) 1246
AccB7I CCANNNNNTGG 2 cut(s) 961, 1256
AccI GTMKAC 1 cut(s) 1110
AciI CCGC 4 cut(s) 289, 686, 1187, 1324
AcsI RAATTY 1 cut(s) 766
AcyI GRCGYC 1 cut(s) 1247
AfaI GTAC 1 cut(s) 602
AfiI CCNNNNNNNGG 4 cut(s) 692, 961, 1186, 1256
AflIII ACRYGT 3 cut(s) 525, 565, 651
AhlI ACTAGT 1 cut(s) 1310
AjnI CCWGG 1 cut(s) 418
AjuI GAANNNNNNNTTGG 4 cut(s) 496, 512, 528, 544
AluBI AGCT 9 cut(s) 850, 998, 1006, 1074, 1124, 1136, 1213, 1303, 1360
AluI AGCT 9 cut(s) 850, 998, 1006, 1074, 1124, 1136, 1213, 1303, 1360
Alw26I GTCTC 3 cut(s) 104, 685, 770
Ama87I CYCGRG 1 cut(s) 195
AoxI GGCC 1 cut(s) 393
ApaI GGGCCC 1 cut(s) 397
ApeKI GCWGC 3 cut(s) 728, 1071, 1351
ApoI RAATTY 1 cut(s) 766
AseI ATTAAT 1 cut(s) 189
Asp700I GAANNNNTTC 1 cut(s) 720
AspLEI GCGC 1 cut(s) 1249
AspS9I GGNCC 3 cut(s) 393, 394, 695
AsuHPI GGTGA 4 cut(s) 171, 211, 675, 871
AvaI CYCGRG 1 cut(s) 195
AvaII GGWCC 1 cut(s) 695
BaeGI GKGCMC 1 cut(s) 397
BanI GGYRCC 1 cut(s) 1246
BanII GRGCYC 1 cut(s) 397
BbsI GAAGAC 1 cut(s) 242
BbvI GCAGC 2 cut(s) 740, 1083
BccI CCATC 4 cut(s) 955, 1170, 1258, 1348
BciT130I CCWGG 1 cut(s) 420
BcoDI GTCTC 3 cut(s) 104, 685, 770
BcuI ACTAGT 1 cut(s) 1310
BfaI CTAG 3 cut(s) 255, 995, 1311
BfoI RGCGCY 1 cut(s) 1250
BglII AGATCT 2 cut(s) 334, 918
BisI GCNGC 4 cut(s) 290, 729, 1072, 1352
BlsI GCNGC 4 cut(s) 291, 730, 1073, 1353
BmcAI AGTACT 1 cut(s) 602
Bme1390I CCNGG 1 cut(s) 420
Bme18I GGWCC 1 cut(s) 695
BmeT110I CYCGRG 1 cut(s) 195
BmgT120I GGNCC 3 cut(s) 393, 394, 695
BmiI GGNNCC 6 cut(s) 395, 424, 459, 953, 1248, 1261
BmrFI CCNGG 1 cut(s) 420
BmsI GCATC 7 cut(s) 52, 316, 386, 955, 1033, 1158, 1229
BpiI GAAGAC 1 cut(s) 242
BpmI CTGGAG 1 cut(s) 1246
BpuEI CTTGAG 1 cut(s) 875
BsaAI YACGTR 1 cut(s) 303
BsaHI GRCGYC 1 cut(s) 1247
BsaJI CCNNGG 1 cut(s) 397
Bsc4I CCNNNNNNNGG 4 cut(s) 692, 961, 1186, 1256
Bse1I ACTGG 4 cut(s) 236, 477, 608, 1263
Bse3DI GCAATG 1 cut(s) 72
BseBI CCWGG 1 cut(s) 420
BseDI CCNNGG 1 cut(s) 397
BseGI GGATG 3 cut(s) 67, 970, 1048
BseLI CCNNNNNNNGG 4 cut(s) 692, 961, 1186, 1256
BseMI GCAATG 1 cut(s) 72
BseMII CTCAG 2 cut(s) 611, 881
BseNI ACTGG 4 cut(s) 236, 477, 608, 1263
BseRI GAGGAG 1 cut(s) 851
BseSI GKGCMC 1 cut(s) 397
BseXI GCAGC 2 cut(s) 740, 1083
BseYI CCCAGC 3 cut(s) 43, 556, 1136
BsgI GTGCAG 2 cut(s) 602, 1304
BshFI GGCC 1 cut(s) 395
BshNI GGYRCC 1 cut(s) 1246
BsiHKCI CYCGRG 1 cut(s) 195
BslI CCNNNNNNNGG 4 cut(s) 692, 961, 1186, 1256
BsmAI GTCTC 3 cut(s) 104, 685, 770
BsmI GAATGC 1 cut(s) 1175
BsnI GGCC 1 cut(s) 395
BsoBI CYCGRG 1 cut(s) 195
Bsp120I GGGCCC 1 cut(s) 393
Bsp1286I GDGCHC 1 cut(s) 397
Bsp143I GATC 4 cut(s) 334, 587, 918, 1126
BspACI CCGC 4 cut(s) 289, 686, 1187, 1324
BspANI GGCC 1 cut(s) 395
BspCNI CTCAG 2 cut(s) 610, 880
BspHI TCATGA 1 cut(s) 1087
BspLI GGNNCC 6 cut(s) 395, 424, 459, 953, 1248, 1261
BspT107I GGYRCC 1 cut(s) 1246
BsrDI GCAATG 1 cut(s) 72
BsrI ACTGG 4 cut(s) 236, 477, 608, 1263
BssECI CCNNGG 1 cut(s) 397
BssMI GATC 4 cut(s) 334, 587, 918, 1126
BssNI GRCGYC 1 cut(s) 1247
BssT1I CCWWGG 1 cut(s) 397
Bst2UI CCWGG 1 cut(s) 420
Bst4CI ACNGT 4 cut(s) 130, 250, 355, 454
Bst6I CTCTTC 2 cut(s) 164, 502
BstACI GRCGYC 1 cut(s) 1247
BstBAI YACGTR 1 cut(s) 303
BstC8I GCNNGC 3 cut(s) 1324, 1328, 1332
BstDEI CTNAG 4 cut(s) 240, 597, 867, 1130
BstF5I GGATG 3 cut(s) 67, 970, 1048
BstH2I RGCGCY 1 cut(s) 1250
BstHHI GCGC 1 cut(s) 1249
BstKTI GATC 4 cut(s) 337, 590, 921, 1129
BstMAI GTCTC 3 cut(s) 104, 685, 770
BstMBI GATC 4 cut(s) 334, 587, 918, 1126
BstMWI GCNNNNNNNGC 2 cut(s) 482, 1357
BstNI CCWGG 1 cut(s) 420
BstNSI RCATGY 4 cut(s) 529, 569, 655, 1334
BstSCI CCNGG 1 cut(s) 418
BstSLI GKGCMC 1 cut(s) 397
BstSNI TACGTA 1 cut(s) 303
BstV1I GCAGC 2 cut(s) 740, 1083
BstV2I GAAGAC 1 cut(s) 242
BstX2I RGATCY 2 cut(s) 334, 918
BstYI RGATCY 2 cut(s) 334, 918
BsuRI GGCC 1 cut(s) 395
BtsCI GGATG 3 cut(s) 67, 970, 1048
BtsIMutI CAGTG 1 cut(s) 470
Cac8I GCNNGC 3 cut(s) 1324, 1328, 1332
CciI TCATGA 1 cut(s) 1087
CfoI GCGC 1 cut(s) 1249
Cfr13I GGNCC 3 cut(s) 393, 394, 695
CseI GACGC 1 cut(s) 907
Csp6I GTAC 1 cut(s) 601
CviAII CATG 9 cut(s) 526, 566, 611, 640, 652, 701, 902, 1088, 1331
CviQI GTAC 1 cut(s) 601
DdeI CTNAG 4 cut(s) 240, 597, 867, 1130
DinI GGCGCC 1 cut(s) 1248
DpnI GATC 4 cut(s) 336, 589, 920, 1128
DpnII GATC 4 cut(s) 334, 587, 918, 1126
Eam1104I CTCTTC 2 cut(s) 164, 502
EarI CTCTTC 2 cut(s) 164, 502
Eco105I TACGTA 1 cut(s) 303
Eco130I CCWWGG 1 cut(s) 397
Eco24I GRGCYC 1 cut(s) 397
Eco32I GATATC 1 cut(s) 864
Eco47I GGWCC 1 cut(s) 695
Eco88I CYCGRG 1 cut(s) 195
EcoO109I RGGNCCY 2 cut(s) 393, 394
EcoRII CCWGG 1 cut(s) 418
EcoRV GATATC 1 cut(s) 864
EcoT14I CCWWGG 1 cut(s) 397
EcoT22I ATGCAT 2 cut(s) 1151, 1336
EcoT38I GRGCYC 1 cut(s) 397
EgeI GGCGCC 1 cut(s) 1248
EheI GGCGCC 1 cut(s) 1248
ErhI CCWWGG 1 cut(s) 397
FaeI CATG 9 cut(s) 529, 569, 614, 643, 655, 704, 905, 1091, 1334
FatI CATG 9 cut(s) 525, 565, 610, 639, 651, 700, 901, 1087, 1330
FauI CCCGC 1 cut(s) 1331
FauNDI CATATG 2 cut(s) 808, 1183
FblI GTMKAC 1 cut(s) 1110
Fnu4HI GCNGC 4 cut(s) 290, 729, 1072, 1352
FokI GGATG 3 cut(s) 74, 977, 1055
FriOI GRGCYC 1 cut(s) 397
Fsp4HI GCNGC 4 cut(s) 290, 729, 1072, 1352
FspBI CTAG 3 cut(s) 255, 995, 1311
GlaI GCGC 1 cut(s) 1248
GluI GCNGC 4 cut(s) 290, 729, 1072, 1352
GsaI CCCAGC 3 cut(s) 47, 560, 1140
GsuI CTGGAG 1 cut(s) 1246
HaeII RGCGCY 1 cut(s) 1250
HaeIII GGCC 1 cut(s) 395
HgaI GACGC 1 cut(s) 907
HhaI GCGC 1 cut(s) 1249
Hin1I GRCGYC 1 cut(s) 1247
Hin1II CATG 9 cut(s) 529, 569, 614, 643, 655, 704, 905, 1091, 1334
Hin6I GCGC 1 cut(s) 1247
HinP1I GCGC 1 cut(s) 1247
HindIII AAGCTT 2 cut(s) 848, 1301
HinfI GANTC 4 cut(s) 112, 464, 937, 1274
HphI GGTGA 4 cut(s) 171, 211, 675, 871
Hpy166II GTNNAC 1 cut(s) 1111
Hpy188I TCNGA 8 cut(s) 40, 553, 870, 897, 925, 936, 942, 1060
Hpy188III TCNNGA 5 cut(s) 98, 571, 854, 1088, 1166
Hpy8I GTNNAC 1 cut(s) 1111
HpyAV CCTTC 6 cut(s) 93, 132, 356, 519, 997, 1219
HpyCH4III ACNGT 4 cut(s) 130, 250, 355, 454
HpyCH4IV ACGT 2 cut(s) 302, 634
HpyF10VI GCNNNNNNNGC 2 cut(s) 482, 1357
HpyF3I CTNAG 4 cut(s) 240, 597, 867, 1130
HpySE526I ACGT 2 cut(s) 302, 634
Hsp92I GRCGYC 1 cut(s) 1247
Hsp92II CATG 9 cut(s) 529, 569, 614, 643, 655, 704, 905, 1091, 1334
HspAI GCGC 1 cut(s) 1247
KasI GGCGCC 1 cut(s) 1246
Kzo9I GATC 4 cut(s) 334, 587, 918, 1126
LmnI GCTCC 2 cut(s) 1011, 1265
Lsp1109I GCAGC 2 cut(s) 740, 1083
LweI GCATC 7 cut(s) 52, 316, 386, 955, 1033, 1158, 1229
MaeI CTAG 3 cut(s) 255, 995, 1311
MaeII ACGT 2 cut(s) 302, 634
MaeIII GTNAC 2 cut(s) 177, 1063
MalI GATC 4 cut(s) 336, 589, 920, 1128
MboI GATC 4 cut(s) 334, 587, 918, 1126
MboII GAAGA 9 cut(s) 181, 247, 329, 429, 459, 489, 504, 626, 722
MflI RGATCY 2 cut(s) 334, 918
MhlI GDGCHC 1 cut(s) 397
MluCI AATT 5 cut(s) 21, 50, 186, 766, 1231
Mly113I GGCGCC 1 cut(s) 1247
MlyI GAGTC 1 cut(s) 106
MmeI TCCRAC 1 cut(s) 952
MnlI CCTC 7 cut(s) 43, 154, 708, 829, 850, 1033, 1127
Mph1103I ATGCAT 2 cut(s) 1151, 1336
MroXI GAANNNNTTC 1 cut(s) 720
MseI TTAA 8 cut(s) 27, 189, 297, 705, 1025, 1076, 1101, 1305
MslI CAYNNNNRTG 3 cut(s) 615, 906, 1196
MspA1I CMGCKG 1 cut(s) 1213
MspR9I CCNGG 1 cut(s) 420
Mva1269I GAATGC 1 cut(s) 1175
MvaI CCWGG 1 cut(s) 420
MwoI GCNNNNNNNGC 2 cut(s) 482, 1357
NarI GGCGCC 1 cut(s) 1247
NdeI CATATG 2 cut(s) 808, 1183
NdeII GATC 4 cut(s) 334, 587, 918, 1126
NlaIII CATG 9 cut(s) 529, 569, 614, 643, 655, 704, 905, 1091, 1334
NlaIV GGNNCC 6 cut(s) 395, 424, 459, 953, 1248, 1261
NmeAIII GCCGAG 1 cut(s) 1223
NmuCI GTSAC 1 cut(s) 177
NsiI ATGCAT 2 cut(s) 1151, 1336
NspI RCATGY 4 cut(s) 529, 569, 655, 1334
PaeI GCATGC 1 cut(s) 1334
PagI TCATGA 1 cut(s) 1087
PciI ACATGT 3 cut(s) 525, 565, 651
PctI GAATGC 1 cut(s) 1175
PdmI GAANNNNTTC 1 cut(s) 720
PfeI GAWTC 3 cut(s) 464, 937, 1274
PflMI CCANNNNNTGG 2 cut(s) 961, 1256
PkrI GCNGC 4 cut(s) 291, 730, 1073, 1353
PleI GAGTC 1 cut(s) 106
PluTI GGCGCC 1 cut(s) 1250
PpsI GAGTC 1 cut(s) 106
Ppu21I YACGTR 1 cut(s) 303
PscI ACATGT 3 cut(s) 525, 565, 651
PshBI ATTAAT 1 cut(s) 189
PsiI TTATAA 1 cut(s) 845
Psp6I CCWGG 1 cut(s) 418
PspFI CCCAGC 3 cut(s) 43, 556, 1136
PspGI CCWGG 1 cut(s) 418
PspN4I GGNNCC 6 cut(s) 395, 424, 459, 953, 1248, 1261
PspOMI GGGCCC 1 cut(s) 393
PspPI GGNCC 3 cut(s) 393, 394, 695
PsuI RGATCY 2 cut(s) 334, 918
PvuII CAGCTG 1 cut(s) 1213
RsaI GTAC 1 cut(s) 602
RsaNI GTAC 1 cut(s) 601
RseI CAYNNNNRTG 3 cut(s) 615, 906, 1196
SaqAI TTAA 8 cut(s) 27, 189, 297, 705, 1025, 1076, 1101, 1305
SatI GCNGC 4 cut(s) 290, 729, 1072, 1352
Sau3AI GATC 4 cut(s) 334, 587, 918, 1126
Sau96I GGNCC 3 cut(s) 393, 394, 695
ScaI AGTACT 1 cut(s) 602
SchI GAGTC 1 cut(s) 106
ScrFI CCNGG 1 cut(s) 420
SduI GDGCHC 1 cut(s) 397
SfaNI GCATC 7 cut(s) 52, 316, 386, 955, 1033, 1158, 1229
SfoI GGCGCC 1 cut(s) 1248
SinI GGWCC 1 cut(s) 695
SmiMI CAYNNNNRTG 3 cut(s) 615, 906, 1196
SmlI CTYRAG 1 cut(s) 854
SmoI CTYRAG 1 cut(s) 854
SnaBI TACGTA 1 cut(s) 303
SpeI ACTAGT 1 cut(s) 1310
SphI GCATGC 1 cut(s) 1334
Sse9I AATT 5 cut(s) 21, 50, 186, 766, 1231
SsiI CCGC 4 cut(s) 289, 686, 1187, 1324
SspDI GGCGCC 1 cut(s) 1246
SspMI CTAG 3 cut(s) 255, 995, 1311
StyD4I CCNGG 1 cut(s) 418
StyI CCWWGG 1 cut(s) 397
TaaI ACNGT 4 cut(s) 130, 250, 355, 454
TaiI ACGT 2 cut(s) 305, 637
TaqI TCGA 2 cut(s) 317, 1167
TasI AATT 5 cut(s) 21, 50, 186, 766, 1231
TatI WGTACW 1 cut(s) 600
TauI GCSGC 1 cut(s) 292
TfiI GAWTC 3 cut(s) 464, 937, 1274
Tru1I TTAA 8 cut(s) 27, 189, 297, 705, 1025, 1076, 1101, 1305
Tru9I TTAA 8 cut(s) 27, 189, 297, 705, 1025, 1076, 1101, 1305
TscAI CASTG 1 cut(s) 477
TseFI GTSAC 1 cut(s) 177
TseI GCWGC 3 cut(s) 728, 1071, 1351
Tsp45I GTSAC 1 cut(s) 177
TspDTI ATGAA 5 cut(s) 350, 627, 729, 1076, 1107
TspGWI ACGGA 1 cut(s) 1237
TspRI CASTG 1 cut(s) 477
Van91I CCANNNNNTGG 2 cut(s) 961, 1256
VpaK11BI GGWCC 1 cut(s) 695
VspI ATTAAT 1 cut(s) 189
XapI RAATTY 1 cut(s) 766
XceI RCATGY 4 cut(s) 529, 569, 655, 1334
XmiI GTMKAC 1 cut(s) 1110
XmnI GAANNNNTTC 1 cut(s) 720
XspI CTAG 3 cut(s) 255, 995, 1311
ZrmI AGTACT 1 cut(s) 602
Zsp2I ATGCAT 2 cut(s) 1151, 1336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.