Prupe.1G243600_v2.0.a1

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000126
Physical Location & Seq
Reverse (-)
25737042 .. 25739724
2683 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G243600.1

Sequence Viewer

Length: 2574 bp
AAGGACCTTGAGGATCACTTTGAGTCCACTCGGAACTCGCTAGAGGCCCGCTTCCGAGAACTCGAGGCCCGGGAGGAGGATATCGGAGTCCGAGAGACCAAATCGGAACCCAAAGATTGGAACTTTCGCTCCGAGATGGAGCCGAAGGCCGGCGAGTTGCGCGGCCTTAGTAAGATCAACTTGCATTCGCTTATGTCATTGATTGAAGAACACAGCGATGAGCTTCTTGTTCAGGAGAAGCTGTTGATGGAAGTTGAGAAGTATGTTAGAAAGAAGGAGATGGAGTTTTATTCGATTGACAAGCGTGTTAAAGAGAGGACAAAGAAATTGAATTGGGTTGAGAAAATCGTGGAAGAGAAGTCGAATTTGGCCGAGTCTAAGGAGGGGGAAGTGAAGGGGTTTCAAGAAGCATTGAACAAGTACGTTGCGTACATTGAGTTGAAAAAGAGGCAATTGAATGAGATTCTTGGTTCGATTGAGAAGCACAAGAAAGAGTTTGATTTGAAACAAGAGCTAATTGAAGCAACGAAAAGATCGATTGAGGAATGTGACAAGGAGTTGATATTGAAAGAGGAGAAACTTAGGTTGATTCAGAAATCGTTAGTGGAGTGCCCTAATACACTTGAATCCAAAGAGAAAATGATTAGGGAAATAGATTTGACAGAGAGAGATTTTGGTTTGCTTAAAAAATCAATGGAGGAACGGTCTTGTAAGCTTCAATTCGAAGCGAGGGAACTTGAATTGATTGACAAGAGGGTCAGTGAACGCCTCAATGAAGTTAAGTTGAAGGAAAAGAATTTGGATCAACTCCAAAAATCGATACAAGATGGCGAGAAGCACTTGGATAAAATGTCTAAGGGACTTCAAAAGAAAGACACACCCCAAAACCTGATATTGAAAGAGAGGCAACTTGAAGACCAGGCCAAAGAGCTTGAACTGAAGCAGAAAGAATTTGATTCGATAAACAAATGCAGTGAAGAACAGACCCAAAACCTGAAATCGAATGAGAGGCAACTTGAAGATCAGGCCAAAGAGCTTGAACTGAAGCAGAAAGAATTTGATTTGATAAACAAATCCACTGAAGAATACTCCCGAAACCTGAAATCGAAAGAGAAAACTAATACCCTTCATTCTCGAGTGAAGATTGAGCAACTGGAACATATCCCTTCCAACAATGCCTTTGTTCCTTCTTCTGCAAGTAATCAATCCAGCATCAATAGGGATGGTAGAGGCTTGCAGTTGTTCGTGAATGATGAAATCTCAGCTGTTCTTGAGGCCTCATTGGACCAAGCAAAATTGGTTTTGGATGCAATGCAAGGGTTTTACCCCTCAAATTCGACTCTAGGCAACAGGGAATGTGATTTAGATTTAGGAGTTATTAGAAGGAGTTGTATTCTTTTGTTAGAGGCTTTAAAGAAAGTCTCACCGCAAATTAATCCTCATGTGAGAGAAGAAGCAATTAAGTTGGCAGATGTCTGGAAGGCTAAAATGACGATGGCAACAGAGAATTGGTTGGAGATTTTGGGTTTTTTGAGGCTTGTTACTACGTATGAAATCACGTCTTCTTATGATGAGAATGAGCTTCAAAGTCTTATTGCTATAGTTGTTGAGAATGAACAGGCAACTGAATTACCCCAGGCTCTTGGTAGCACAAAAAATGCATCTGCCATCATCATTTGTTCCCCTGAGAAACCAGAATCTTCACTGGCCAAAAATGCAGCAGCTGTTTCTTTTCCGAATCTTCAACTAATTGCTACTACAGATGCAAGGACTTTGCAGGGATTTCTGCATGAGCTTGCGAGAGGGAATCATTTAATACATAATGAAACTTTGGCTGCTCTTCAGACGTCATTGGACCCAGCAAACTTTGTGTTGGATGTGATGCAGAATTCTTTTGCTCAATACTGGGGAGACGGAGATGTTCCTTCTAAAGAAACTGTCATGTTGAGTTACATTAACCTGTTGGAGCAGCTAATGGGTGTCTCACTGCATGTTGGTCGTCATGTGAAGGACGATGCGGAAAAGCTAGCAATCCAGTGGAAAGCAAAAATGGGAGCTGATACTCAAAATTCATTGGAACGTTTGGGTTTTTTGCAGTTTATTGCTACATATGGGTTGTTTTCTACCTTTAGTAGAGATGATATTGCACCGCTTCTTGGGAGAATTTCTCAGGATAAACAGGCTCGAGAATTATGTCAGAAACTCAGGTTTGCAAATAAGATCCCAGCACATTTTATTATGAAACTTATTGAAAGGAGGAAACTGCTTGAGGCTGGAAGGTTGATTTGCACCTTCAAGTTCATTGACATTTTCCCCCCAGTACCACTCTTAGAGAAGTATGTGGAGAACAGAAAGAACTGGAGGTGTAGAATTTGCAAGAGAAAGAACTCACTAGATAAAAAGGATAAGGTTTTAGATAATGATATTGCTGATTTAAGAGCTGTGATTCAGTGCATCAAAGATTGCAAGCTCGAGTCTGAATACCCATCCGGGAACATTGAAATACAAATAGAAGTGCTTGAGAAAATAAAGGAGGATCGAAGAAGACATTCAGCAACTTCTCTTGCTTGCAAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

858

Amino Acids

98.99

Weight (kDa)

6.04

Isoelectric Point (pI)

51.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 755
AatII GACGTC 1 cut(s) 1850
AccB7I CCANNNNNTGG 1 cut(s) 117
AccII CGCG 1 cut(s) 162
AciI CCGC 5 cut(s) 49, 162, 1427, 2018, 2150
AclI AACGTT 1 cut(s) 2080
AclWI GGATC 4 cut(s) 21, 810, 2215, 2544
AcoI YGGCCR 2 cut(s) 369, 1707
AcsI RAATTY 9 cut(s) 364, 796, 950, 1055, 1333, 1888, 2068, 2163, 2370
AcuI CTGAAG 4 cut(s) 959, 1064, 1101, 1826
AcyI GRCGYC 1 cut(s) 1847
AfaI GTAC 3 cut(s) 422, 431, 2322
AfiI CCNNNNNNNGG 4 cut(s) 76, 117, 149, 2156
AjiI CACGTC 1 cut(s) 1560
AjnI CCWGG 2 cut(s) 918, 1635
AjuI GAANNNNNNNTTGG 2 cut(s) 350, 382
AloI GAACNNNNNNTCC 2 cut(s) 113, 145
Alw26I GTCTC 4 cut(s) 89, 1426, 1905, 1987
AlwI GGATC 4 cut(s) 21, 810, 2215, 2544
AlwNI CAGNNNCTG 1 cut(s) 1724
Ama87I CYCGRG 5 cut(s) 62, 69, 1134, 2184, 2471
AoxI GGCC 9 cut(s) 45, 66, 147, 163, 369, 921, 1026, 1275, 1707
ApeKI GCWGC 4 cut(s) 1718, 1721, 1835, 1969
ApoI RAATTY 9 cut(s) 364, 796, 950, 1055, 1333, 1888, 2068, 2163, 2370
AseI ATTAAT 1 cut(s) 1434
Asp700I GAANNNNTTC 1 cut(s) 2548
AspLEI GCGC 1 cut(s) 162
AspS9I GGNCC 5 cut(s) 4, 46, 67, 1285, 1855
AsuC2I CCSGG 3 cut(s) 70, 71, 2491
AsuHPI GGTGA 1 cut(s) 1416
AsuII TTCGAA 1 cut(s) 723
AsuNHI GCTAGC 1 cut(s) 2026
AvaI CYCGRG 5 cut(s) 62, 69, 1134, 2184, 2471
AvaII GGWCC 3 cut(s) 4, 1285, 1855
BaeGI GKGCMC 1 cut(s) 614
BalI TGGCCA 1 cut(s) 1709
BbsI GAAGAC 3 cut(s) 921, 1554, 2551
BbvI GCAGC 4 cut(s) 1730, 1733, 1822, 1981
BccI CCATC 8 cut(s) 130, 241, 274, 821, 1217, 1489, 1676, 2494
BcgI CGANNNNNNTGC 2 cut(s) 1979, 2013
BciT130I CCWGG 2 cut(s) 920, 1637
BcnI CCSGG 3 cut(s) 70, 71, 2491
BcoDI GTCTC 4 cut(s) 89, 1426, 1905, 1987
BfaI CTAG 4 cut(s) 41, 1343, 2027, 2393
BfmI CTRYAG 2 cut(s) 1599, 1758
BisI GCNGC 5 cut(s) 163, 1719, 1722, 1836, 1970
BlsI GCNGC 5 cut(s) 164, 1720, 1723, 1837, 1971
Bme1390I CCNGG 5 cut(s) 70, 71, 920, 1637, 2491
Bme18I GGWCC 3 cut(s) 4, 1285, 1855
BmeT110I CYCGRG 5 cut(s) 62, 69, 1134, 2184, 2471
BmgBI CACGTC 1 cut(s) 1560
BmgT120I GGNCC 5 cut(s) 4, 46, 67, 1285, 1855
BmiI GGNNCC 3 cut(s) 108, 141, 1857
BmrFI CCNGG 5 cut(s) 70, 71, 920, 1637, 2491
BmrI ACTGGG 2 cut(s) 1915, 2312
BmsI GCATC 7 cut(s) 1221, 1297, 1670, 1753, 1872, 2005, 2463
BmtI GCTAGC 1 cut(s) 2030
BmuI ACTGGG 2 cut(s) 1915, 2312
BpiI GAAGAC 3 cut(s) 921, 1554, 2551
BplI GAGNNNNNCTC 2 cut(s) 2152, 2184
BpmI CTGGAG 1 cut(s) 2380
Bpu14I TTCGAA 1 cut(s) 723
BpuEI CTTGAG 4 cut(s) 29, 1292, 2288, 2540
BpuMI CCSGG 3 cut(s) 70, 71, 2491
Bsa29I ATCGAT 2 cut(s) 536, 818
BsaAI YACGTR 1 cut(s) 1548
BsaHI GRCGYC 1 cut(s) 1847
BsaI GGTCTC 1 cut(s) 89
BsaJI CCNNGG 2 cut(s) 69, 1635
BsaXI ACNNNNNCTCC 8 cut(s) 113, 143, 227, 257, 269, 299, 689, 719
Bsc4I CCNNNNNNNGG 4 cut(s) 76, 117, 149, 2156
Bse118I RCCGGY 1 cut(s) 149
Bse1I ACTGG 6 cut(s) 1158, 1710, 1910, 2035, 2318, 2363
Bse3DI GCAATG 1 cut(s) 1317
BseBI CCWGG 2 cut(s) 920, 1637
BseCI ATCGAT 2 cut(s) 536, 818
BseDI CCNNGG 2 cut(s) 69, 1635
BseGI GGATG 4 cut(s) 1228, 1312, 1882, 2486
BseLI CCNNNNNNNGG 4 cut(s) 76, 117, 149, 2156
BseMI GCAATG 1 cut(s) 1317
BseMII CTCAG 4 cut(s) 1275, 1677, 2183, 2218
BseNI ACTGG 6 cut(s) 1158, 1710, 1910, 2035, 2318, 2363
BseRI GAGGAG 2 cut(s) 89, 587
BseSI GKGCMC 1 cut(s) 614
BseXI GCAGC 4 cut(s) 1730, 1733, 1822, 1981
BseYI CCCAGC 2 cut(s) 1858, 2224
Bsh1236I CGCG 1 cut(s) 162
BshFI GGCC 9 cut(s) 47, 68, 149, 165, 371, 923, 1028, 1277, 1709
BshVI ATCGAT 2 cut(s) 536, 818
BsiHKCI CYCGRG 5 cut(s) 62, 69, 1134, 2184, 2471
BsiSI CCGG 3 cut(s) 70, 150, 2490
BslFI GGGAC 1 cut(s) 873
BslI CCNNNNNNNGG 4 cut(s) 76, 117, 149, 2156
BsmAI GTCTC 4 cut(s) 89, 1426, 1905, 1987
BsmBI CGTCTC 1 cut(s) 1905
BsmFI GGGAC 1 cut(s) 873
BsmI GAATGC 1 cut(s) 184
BsnI GGCC 9 cut(s) 47, 68, 149, 165, 371, 923, 1028, 1277, 1709
Bso31I GGTCTC 1 cut(s) 89
BsoBI CYCGRG 5 cut(s) 62, 69, 1134, 2184, 2471
Bsp119I TTCGAA 1 cut(s) 723
Bsp1286I GDGCHC 1 cut(s) 614
Bsp143I GATC 7 cut(s) 13, 174, 533, 802, 1021, 2220, 2536
BspACI CCGC 5 cut(s) 49, 162, 1427, 2018, 2150
BspANI GGCC 9 cut(s) 47, 68, 149, 165, 371, 923, 1028, 1277, 1709
BspCNI CTCAG 4 cut(s) 1274, 1678, 2182, 2217
BspDI ATCGAT 2 cut(s) 536, 818
BspFNI CGCG 1 cut(s) 162
BspLI GGNNCC 3 cut(s) 108, 141, 1857
BspOI GCTAGC 1 cut(s) 2030
BspPI GGATC 4 cut(s) 21, 810, 2215, 2544
BspQI GCTCTTC 1 cut(s) 1845
BspT104I TTCGAA 1 cut(s) 723
BspTNI GGTCTC 1 cut(s) 89
BsrDI GCAATG 1 cut(s) 1317
BsrFI RCCGGY 1 cut(s) 149
BsrI ACTGG 6 cut(s) 1158, 1710, 1910, 2035, 2318, 2363
BssAI RCCGGY 1 cut(s) 149
BssECI CCNNGG 2 cut(s) 69, 1635
BssMI GATC 7 cut(s) 13, 174, 533, 802, 1021, 2220, 2536
BssNI GRCGYC 1 cut(s) 1847
Bst2UI CCWGG 2 cut(s) 920, 1637
Bst4CI ACNGT 2 cut(s) 705, 1939
Bst6I CTCTTC 2 cut(s) 348, 1845
BstACI GRCGYC 1 cut(s) 1847
BstBAI YACGTR 1 cut(s) 1548
BstBI TTCGAA 1 cut(s) 723
BstC8I GCNNGC 7 cut(s) 49, 151, 1235, 1797, 2028, 2468, 2569
BstDEI CTNAG 9 cut(s) 167, 378, 581, 855, 1261, 1686, 2169, 2204, 2329
BstF5I GGATG 4 cut(s) 1228, 1312, 1882, 2486
BstFNI CGCG 1 cut(s) 162
BstHHI GCGC 1 cut(s) 162
BstKTI GATC 7 cut(s) 16, 177, 536, 805, 1024, 2223, 2539
BstMAI GTCTC 4 cut(s) 89, 1426, 1905, 1987
BstMBI GATC 7 cut(s) 13, 174, 533, 802, 1021, 2220, 2536
BstMWI GCNNNNNNNGC 2 cut(s) 159, 1715
BstNI CCWGG 2 cut(s) 920, 1637
BstNSI RCATGY 1 cut(s) 1994
BstSCI CCNGG 5 cut(s) 68, 69, 918, 1635, 2489
BstSFI CTRYAG 2 cut(s) 1599, 1758
BstSLI GKGCMC 1 cut(s) 614
BstSNI TACGTA 1 cut(s) 1548
BstUI CGCG 1 cut(s) 162
BstV1I GCAGC 4 cut(s) 1730, 1733, 1822, 1981
BstV2I GAAGAC 3 cut(s) 921, 1554, 2551
BstX2I RGATCY 1 cut(s) 2220
BstXI CCANNNNNNTGG 1 cut(s) 1643
BstYI RGATCY 1 cut(s) 2220
Bsu15I ATCGAT 2 cut(s) 536, 818
BsuRI GGCC 9 cut(s) 47, 68, 149, 165, 371, 923, 1028, 1277, 1709
BsuTUI ATCGAT 2 cut(s) 536, 818
BtgZI GCGATG 1 cut(s) 231
BtrI CACGTC 1 cut(s) 1560
BtsCI GGATG 4 cut(s) 1228, 1312, 1882, 2486
BtsI GCAGTG 2 cut(s) 979, 1985
BtsIMutI CAGTG 7 cut(s) 766, 979, 1077, 1703, 1985, 2042, 2456
Cac8I GCNNGC 7 cut(s) 49, 151, 1235, 1797, 2028, 2468, 2569
CaiI CAGNNNCTG 1 cut(s) 1724
CfoI GCGC 1 cut(s) 162
Cfr10I RCCGGY 1 cut(s) 149
Cfr13I GGNCC 5 cut(s) 4, 46, 67, 1285, 1855
Cfr9I CCCGGG 1 cut(s) 69
ClaI ATCGAT 2 cut(s) 536, 818
Csp6I GTAC 3 cut(s) 421, 430, 2321
CviAII CATG 5 cut(s) 1442, 1790, 1942, 1991, 2003
CviQI GTAC 3 cut(s) 421, 430, 2321
DdeI CTNAG 9 cut(s) 167, 378, 581, 855, 1261, 1686, 2169, 2204, 2329
DpnI GATC 7 cut(s) 15, 176, 535, 804, 1023, 2222, 2538
DpnII GATC 7 cut(s) 13, 174, 533, 802, 1021, 2220, 2536
DraI TTTAAA 1 cut(s) 1413
DrdI GACNNNNNNGTC 1 cut(s) 755
DseDI GACNNNNNNGTC 1 cut(s) 755
EaeI YGGCCR 2 cut(s) 369, 1707
Eam1104I CTCTTC 2 cut(s) 348, 1845
EarI CTCTTC 2 cut(s) 348, 1845
Eco105I TACGTA 1 cut(s) 1548
Eco147I AGGCCT 1 cut(s) 1277
Eco31I GGTCTC 1 cut(s) 89
Eco32I GATATC 1 cut(s) 82
Eco47I GGWCC 3 cut(s) 4, 1285, 1855
Eco57I CTGAAG 4 cut(s) 959, 1064, 1101, 1826
Eco88I CYCGRG 5 cut(s) 62, 69, 1134, 2184, 2471
EcoO109I RGGNCCY 1 cut(s) 4
EcoRI GAATTC 1 cut(s) 1888
EcoRII CCWGG 2 cut(s) 918, 1635
EcoRV GATATC 1 cut(s) 82
EcoT22I ATGCAT 1 cut(s) 1663
Esp3I CGTCTC 1 cut(s) 1905
FaeI CATG 5 cut(s) 1445, 1793, 1945, 1994, 2006
FalI AAGNNNNNCTT 2 cut(s) 164, 196
FaqI GGGAC 1 cut(s) 873
FatI CATG 5 cut(s) 1441, 1789, 1941, 1990, 2002
FauI CCCGC 1 cut(s) 56
FauNDI CATATG 1 cut(s) 2110
Fnu4HI GCNGC 5 cut(s) 163, 1719, 1722, 1836, 1970
FokI GGATG 4 cut(s) 1235, 1319, 1889, 2473
Fsp4HI GCNGC 5 cut(s) 163, 1719, 1722, 1836, 1970
FspBI CTAG 4 cut(s) 41, 1343, 2027, 2393
GlaI GCGC 1 cut(s) 161
GluI GCNGC 5 cut(s) 163, 1719, 1722, 1836, 1970
GsaI CCCAGC 2 cut(s) 1862, 2228
GsuI CTGGAG 1 cut(s) 2380
HaeIII GGCC 9 cut(s) 47, 68, 149, 165, 371, 923, 1028, 1277, 1709
HapII CCGG 3 cut(s) 70, 150, 2490
HhaI GCGC 1 cut(s) 162
Hin1I GRCGYC 1 cut(s) 1847
Hin1II CATG 5 cut(s) 1445, 1793, 1945, 1994, 2006
Hin6I GCGC 1 cut(s) 160
HinP1I GCGC 1 cut(s) 160
HindIII AAGCTT 1 cut(s) 713
HpaII CCGG 3 cut(s) 70, 150, 2490
HphI GGTGA 1 cut(s) 1416
Hpy166II GTNNAC 2 cut(s) 27, 764
Hpy188III TCNNGA 9 cut(s) 233, 404, 1092, 1134, 1246, 1271, 1477, 2171, 2186
Hpy8I GTNNAC 2 cut(s) 27, 764
HpyCH4III ACNGT 2 cut(s) 705, 1939
HpyCH4IV ACGT 5 cut(s) 423, 1547, 1559, 1847, 2080
HpyF10VI GCNNNNNNNGC 2 cut(s) 159, 1715
HpyF3I CTNAG 9 cut(s) 167, 378, 581, 855, 1261, 1686, 2169, 2204, 2329
HpySE526I ACGT 5 cut(s) 423, 1547, 1559, 1847, 2080
Hsp92I GRCGYC 1 cut(s) 1847
Hsp92II CATG 5 cut(s) 1445, 1793, 1945, 1994, 2006
HspAI GCGC 1 cut(s) 160
KroI GCCGGC 1 cut(s) 149
KroNI GCCGGC 1 cut(s) 151
Kzo9I GATC 7 cut(s) 13, 174, 533, 802, 1021, 2220, 2536
LguI GCTCTTC 1 cut(s) 1845
LmnI GCTCC 4 cut(s) 134, 139, 1966, 2054
Lsp1109I GCAGC 4 cut(s) 1730, 1733, 1822, 1981
LweI GCATC 7 cut(s) 1221, 1297, 1670, 1753, 1872, 2005, 2463
MaeI CTAG 4 cut(s) 41, 1343, 2027, 2393
MaeII ACGT 5 cut(s) 423, 1547, 1559, 1847, 2080
MaeIII GTNAC 3 cut(s) 548, 1540, 1949
MalI GATC 7 cut(s) 15, 176, 535, 804, 1023, 2222, 2538
MboI GATC 7 cut(s) 13, 174, 533, 802, 1021, 2220, 2536
MfeI CAATTG 1 cut(s) 452
MflI RGATCY 1 cut(s) 2220
MhlI GDGCHC 1 cut(s) 614
MlsI TGGCCA 1 cut(s) 1709
MluNI TGGCCA 1 cut(s) 1709
MlyI GAGTC 5 cut(s) 32, 96, 383, 1333, 2483
MmeI TCCRAC 4 cut(s) 1194, 1494, 1854, 1944
Mox20I TGGCCA 1 cut(s) 1709
Mph1103I ATGCAT 1 cut(s) 1663
MroNI GCCGGC 1 cut(s) 149
MroXI GAANNNNTTC 1 cut(s) 2548
MscI TGGCCA 1 cut(s) 1709
MseI TTAA 9 cut(s) 309, 684, 780, 1412, 1434, 1461, 1814, 1956, 2435
MslI CAYNNNNRTG 1 cut(s) 216
Msp20I TGGCCA 1 cut(s) 1709
MspA1I CMGCKG 2 cut(s) 1265, 1724
MspI CCGG 3 cut(s) 70, 150, 2490
MspR9I CCNGG 5 cut(s) 70, 71, 920, 1637, 2491
MunI CAATTG 1 cut(s) 452
Mva1269I GAATGC 1 cut(s) 184
MvaI CCWGG 2 cut(s) 920, 1637
MvnI CGCG 1 cut(s) 162
MwoI GCNNNNNNNGC 2 cut(s) 159, 1715
NaeI GCCGGC 1 cut(s) 151
NciI CCSGG 3 cut(s) 70, 71, 2491
NdeI CATATG 1 cut(s) 2110
NdeII GATC 7 cut(s) 13, 174, 533, 802, 1021, 2220, 2536
NgoMIV GCCGGC 1 cut(s) 149
NheI GCTAGC 1 cut(s) 2026
NlaIII CATG 5 cut(s) 1445, 1793, 1945, 1994, 2006
NlaIV GGNNCC 3 cut(s) 108, 141, 1857
NmeAIII GCCGAG 1 cut(s) 397
NmuCI GTSAC 1 cut(s) 548
NsiI ATGCAT 1 cut(s) 1663
NspI RCATGY 1 cut(s) 1994
NspV TTCGAA 1 cut(s) 723
PaeR7I CTCGAG 4 cut(s) 62, 1134, 2184, 2471
PceI AGGCCT 1 cut(s) 1277
PciSI GCTCTTC 1 cut(s) 1845
PcsI WCGNNNNNNNCGW 1 cut(s) 533
PctI GAATGC 1 cut(s) 184
PdiI GCCGGC 1 cut(s) 151
PdmI GAANNNNTTC 1 cut(s) 2548
PfeI GAWTC 8 cut(s) 463, 589, 626, 956, 1697, 1738, 1807, 2446
PflMI CCANNNNNTGG 1 cut(s) 117
PfoI TCCNGGA 1 cut(s) 2489
PkrI GCNGC 5 cut(s) 164, 1720, 1723, 1837, 1971
PleI GAGTC 5 cut(s) 31, 95, 382, 1333, 2482
PpsI GAGTC 5 cut(s) 31, 95, 382, 1333, 2482
Ppu21I YACGTR 1 cut(s) 1548
PpuMI RGGWCCY 1 cut(s) 4
PshBI ATTAAT 1 cut(s) 1434
Psp1406I AACGTT 1 cut(s) 2080
Psp5II RGGWCCY 1 cut(s) 4
Psp6I CCWGG 2 cut(s) 918, 1635
PspFI CCCAGC 2 cut(s) 1858, 2224
PspGI CCWGG 2 cut(s) 918, 1635
PspN4I GGNNCC 3 cut(s) 108, 141, 1857
PspPI GGNCC 5 cut(s) 4, 46, 67, 1285, 1855
PspPPI RGGWCCY 1 cut(s) 4
PspXI VCTCGAGB 2 cut(s) 62, 2471
PstNI CAGNNNCTG 1 cut(s) 1724
PsuI RGATCY 1 cut(s) 2220
PvuII CAGCTG 2 cut(s) 1265, 1724
RsaI GTAC 3 cut(s) 422, 431, 2322
RsaNI GTAC 3 cut(s) 421, 430, 2321
RseI CAYNNNNRTG 1 cut(s) 216
SapI GCTCTTC 1 cut(s) 1845
SaqAI TTAA 9 cut(s) 309, 684, 780, 1412, 1434, 1461, 1814, 1956, 2435
SatI GCNGC 5 cut(s) 163, 1719, 1722, 1836, 1970
Sau3AI GATC 7 cut(s) 13, 174, 533, 802, 1021, 2220, 2536
Sau96I GGNCC 5 cut(s) 4, 46, 67, 1285, 1855
SchI GAGTC 5 cut(s) 32, 96, 383, 1333, 2483
ScrFI CCNGG 5 cut(s) 70, 71, 920, 1637, 2491
SduI GDGCHC 1 cut(s) 614
SfaNI GCATC 7 cut(s) 1221, 1297, 1670, 1753, 1872, 2005, 2463
SfcI CTRYAG 2 cut(s) 1599, 1758
Sfr274I CTCGAG 4 cut(s) 62, 1134, 2184, 2471
SfuI TTCGAA 1 cut(s) 723
SinI GGWCC 3 cut(s) 4, 1285, 1855
SlaI CTCGAG 4 cut(s) 62, 1134, 2184, 2471
SmaI CCCGGG 1 cut(s) 71
SmiMI CAYNNNNRTG 1 cut(s) 216
SmlI CTYRAG 8 cut(s) 8, 62, 1134, 1271, 2184, 2267, 2471, 2519
SmoI CTYRAG 8 cut(s) 8, 62, 1134, 1271, 2184, 2267, 2471, 2519
SnaBI TACGTA 1 cut(s) 1548
SseBI AGGCCT 1 cut(s) 1277
SsiI CCGC 5 cut(s) 49, 162, 1427, 2018, 2150
SspMI CTAG 4 cut(s) 41, 1343, 2027, 2393
StuI AGGCCT 1 cut(s) 1277
StyD4I CCNGG 5 cut(s) 68, 69, 918, 1635, 2489
TaaI ACNGT 2 cut(s) 705, 1939
TaiI ACGT 5 cut(s) 426, 1550, 1562, 1850, 2083
TauI GCSGC 1 cut(s) 165
TfiI GAWTC 8 cut(s) 463, 589, 626, 956, 1697, 1738, 1807, 2446
Tru1I TTAA 9 cut(s) 309, 684, 780, 1412, 1434, 1461, 1814, 1956, 2435
Tru9I TTAA 9 cut(s) 309, 684, 780, 1412, 1434, 1461, 1814, 1956, 2435
TscAI CASTG 7 cut(s) 766, 979, 1084, 1710, 1992, 2042, 2456
TseFI GTSAC 1 cut(s) 548
TseI GCWGC 4 cut(s) 1718, 1721, 1835, 1969
Tsp45I GTSAC 1 cut(s) 548
TspDTI ATGAA 9 cut(s) 789, 1118, 1269, 1566, 1629, 1839, 2061, 2255, 2290
TspGWI ACGGA 1 cut(s) 1929
TspMI CCCGGG 1 cut(s) 69
TspRI CASTG 7 cut(s) 766, 979, 1084, 1710, 1992, 2042, 2456
Van91I CCANNNNNTGG 1 cut(s) 117
VpaK11BI GGWCC 3 cut(s) 4, 1285, 1855
VspI ATTAAT 1 cut(s) 1434
XapI RAATTY 9 cut(s) 364, 796, 950, 1055, 1333, 1888, 2068, 2163, 2370
XceI RCATGY 1 cut(s) 1994
XhoI CTCGAG 4 cut(s) 62, 1134, 2184, 2471
XmaI CCCGGG 1 cut(s) 69
XmnI GAANNNNTTC 1 cut(s) 2548
XspI CTAG 4 cut(s) 41, 1343, 2027, 2393
ZraI GACGTC 1 cut(s) 1848
Zsp2I ATGCAT 1 cut(s) 1663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.